MC00g0011 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC00g0011
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	scaffold31: 155736 .. 155939 (+)
RNA-Seq Expression	MC00g0011
Synteny	MC00g0011

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGCGGAAATGGTGATTGAGGAGGCTGAAAGTGTAGCAGAAGTAGTAGAAAAGGCAGCAGAAATAGCAGAGAAGGCATCAGCAGAAATTGCAAAGAAACTTCCTGAGAAGAGTAAGCTGAAAGAAGCAGCTGAAGTGGTAGAAACTTATTCAAAGCAAATTGCCCATGATGCTCACTTAACACAAGACATCCTCCACAAGGTT

mRNA sequence

GAAGCGGAAATGGTGATTGAGGAGGCTGAAAGTGTAGCAGAAGTAGTAGAAAAGGCAGCAGAAATAGCAGAGAAGGCATCAGCAGAAATTGCAAAGAAACTTCCTGAGAAGAGTAAGCTGAAAGAAGCAGCTGAAGTGGTAGAAACTTATTCAAAGCAAATTGCCCATGATGCTCACTTAACACAAGACATCCTCCACAAGGTT

Coding sequence (CDS)

GAAGCGGAAATGGTGATTGAGGAGGCTGAAAGTGTAGCAGAAGTAGTAGAAAAGGCAGCAGAAATAGCAGAGAAGGCATCAGCAGAAATTGCAAAGAAACTTCCTGAGAAGAGTAAGCTGAAAGAAGCAGCTGAAGTGGTAGAAACTTATTCAAAGCAAATTGCCCATGATGCTCACTTAACACAAGACATCCTCCACAAGGTT

Protein sequence

EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHLTQDILHKV

Homology

[Close]

BLAST of MC00g0011 vs. NCBI nr
Match: XP_022141966.1 (uncharacterized protein LOC111012212 [Momordica charantia])

HSP 1 Score: 114 bits (286), Expect = 7.56e-30
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1   EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL 60
           EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL
Sbjct: 126 EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL 185

Query: 61  TQDILHKV 68
           TQDILHKV
Sbjct: 186 TQDILHKV 193

[Close]

BLAST of MC00g0011 vs. NCBI nr
Match: XP_038888803.1 (uncharacterized protein LOC120078589 [Benincasa hispida])

HSP 1 Score: 99.0 bits (245), Expect = 7.00e-24
Identity = 56/68 (82.35%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 1   EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL 60
           EAEMVIEEAE+VA+VVE+ AE+ EK SAEIA+KLPEKSKLKEAA+VVE YSK++AHDAHL
Sbjct: 113 EAEMVIEEAENVAKVVEEVAELTEKVSAEIAEKLPEKSKLKEAAQVVENYSKEVAHDAHL 172

Query: 61  TQDILHKV 68
           TQDILHKV
Sbjct: 173 TQDILHKV 180

[Close]

BLAST of MC00g0011 vs. NCBI nr
Match: XP_011658811.1 (uncharacterized protein LOC105436091 [Cucumis sativus] >KAE8645815.1 hypothetical protein Csa_017132 [Cucumis sativus])

HSP 1 Score: 99.4 bits (246), Expect = 7.33e-24
Identity = 57/68 (83.82%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1   EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL 60
           EAEMVIEEAE+VAEVVEK AE+ EK S +I +KLPEKSKLKEAAEVVE+YSK+IAHDAHL
Sbjct: 122 EAEMVIEEAENVAEVVEKVAELTEKVSTKICEKLPEKSKLKEAAEVVESYSKEIAHDAHL 181

Query: 61  TQDILHKV 68
           TQDILHKV
Sbjct: 182 TQDILHKV 189

[Close]

BLAST of MC00g0011 vs. NCBI nr
Match: KAA0031457.1 (uncharacterized protein E6C27_scaffold139G002150 [Cucumis melo var. makuwa] >TYK06910.1 uncharacterized protein E5676_scaffold13G002180 [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 3.05e-23
Identity = 55/68 (80.88%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 1   EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL 60
           EAEMV+EE E+VAEVVEK AE+ EK S EI++KLPEKSKLKEAA+VVE YSK+IAHDAHL
Sbjct: 119 EAEMVMEEVENVAEVVEKVAELTEKVSTEISEKLPEKSKLKEAAQVVENYSKEIAHDAHL 178

Query: 61  TQDILHKV 68
           TQDILHKV
Sbjct: 179 TQDILHKV 186

[Close]

BLAST of MC00g0011 vs. NCBI nr
Match: XP_008455165.1 (PREDICTED: uncharacterized protein LOC103495399 [Cucumis melo])

HSP 1 Score: 97.1 bits (240), Expect = 4.96e-23
Identity = 55/68 (80.88%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 1   EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL 60
           EAEMV+EE E+VAEVVEK AE+ EK S EI++KLPEKSKLKEAA+VVE YSK+IAHDAHL
Sbjct: 119 EAEMVMEEVENVAEVVEKVAELTEKVSTEISEKLPEKSKLKEAAQVVENYSKEIAHDAHL 178

Query: 61  TQDILHKV 68
           TQDILHKV
Sbjct: 179 TQDILHKV 186

[Close]

BLAST of MC00g0011 vs. ExPASy TrEMBL
Match: A0A6J1CKS7 (uncharacterized protein LOC111012212 OS=Momordica charantia OX=3673 GN=LOC111012212 PE=4 SV=1)

HSP 1 Score: 114 bits (286), Expect = 3.66e-30
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1   EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL 60
           EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL
Sbjct: 126 EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL 185

Query: 61  TQDILHKV 68
           TQDILHKV
Sbjct: 186 TQDILHKV 193

[Close]

BLAST of MC00g0011 vs. ExPASy TrEMBL
Match: A0A5A7SPP8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002180 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.47e-23
Identity = 55/68 (80.88%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 1   EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL 60
           EAEMV+EE E+VAEVVEK AE+ EK S EI++KLPEKSKLKEAA+VVE YSK+IAHDAHL
Sbjct: 119 EAEMVMEEVENVAEVVEKVAELTEKVSTEISEKLPEKSKLKEAAQVVENYSKEIAHDAHL 178

Query: 61  TQDILHKV 68
           TQDILHKV
Sbjct: 179 TQDILHKV 186

[Close]

BLAST of MC00g0011 vs. ExPASy TrEMBL
Match: A0A1S3C099 (uncharacterized protein LOC103495399 OS=Cucumis melo OX=3656 GN=LOC103495399 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.40e-23
Identity = 55/68 (80.88%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 1   EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL 60
           EAEMV+EE E+VAEVVEK AE+ EK S EI++KLPEKSKLKEAA+VVE YSK+IAHDAHL
Sbjct: 119 EAEMVMEEVENVAEVVEKVAELTEKVSTEISEKLPEKSKLKEAAQVVENYSKEIAHDAHL 178

Query: 61  TQDILHKV 68
           TQDILHKV
Sbjct: 179 TQDILHKV 186

[Close]

BLAST of MC00g0011 vs. ExPASy TrEMBL
Match: A0A0A0K622 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G064570 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.06e-22
Identity = 57/68 (83.82%), Postives = 63/68 (92.65%), Query Frame = 0


Query: 1   EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL 60
           EAEMVIEEAE+VAEVVEK AE+ EK S +I +KLPEKSKLKEAAEVVE+YSK+IAHDAHL
Sbjct: 386 EAEMVIEEAENVAEVVEKVAELTEKVSTKICEKLPEKSKLKEAAEVVESYSKEIAHDAHL 445

Query: 61  TQDILHKV 68
           TQDILHKV
Sbjct: 446 TQDILHKV 453

[Close]

BLAST of MC00g0011 vs. ExPASy TrEMBL
Match: A0A6J1I3G6 (uncharacterized protein LOC111470651 OS=Cucurbita maxima OX=3661 GN=LOC111470651 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.11e-18
Identity = 50/68 (73.53%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 1   EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL 60
           EAE  IEEAE VAEVVEK AE+ EK SAEI +KLPEKS++K+AAE VE YSK+IAHDA L
Sbjct: 97  EAEKGIEEAEHVAEVVEKVAELTEKVSAEIGEKLPEKSRMKDAAEAVEKYSKEIAHDALL 156

Query: 61  TQDILHKV 68
            Q ILHKV
Sbjct: 157 AQHILHKV 164

[Close]

BLAST of MC00g0011 vs. TAIR 10
Match: AT2G14095.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 106 Blast hits to 103 proteins in 21 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 4; Plants - 87; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 66.6 bits (161), Expect = 8.7e-12
Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 0


Query: 1   EAEMVIEEAESVAEVVEKAAEIAEKASAEIAKKLPEKSKLKEAAEVVETYSKQIAHDAHL 60
           EAE+V+E  E+VAE+VEK A   ++ + E+A+KLPEK+KLK+ A V+E  S+  AH+AHL
Sbjct: 123 EAELVVEGVEAVAEMVEKVATATDEMAEEMAEKLPEKNKLKQVALVLEHISEVAAHEAHL 182

Query: 61  TQDILHKV 69
           TQD LHKV
Sbjct: 183 TQDFLHKV 190

The following BLAST results are available for this feature:

BLAST of MC00g0011 vs.


Match Name	E-value	Identity	Description

BLAST of MC00g0011 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141966.1	7.56e-30	100.00	uncharacterized protein LOC111012212 [Momordica charantia]	[more]
XP_038888803.1	7.00e-24	82.35	uncharacterized protein LOC120078589 [Benincasa hispida]	[more]
XP_011658811.1	7.33e-24	83.82	uncharacterized protein LOC105436091 [Cucumis sativus] >KAE8645815.1 hypothetica...	[more]
KAA0031457.1	3.05e-23	80.88	uncharacterized protein E6C27_scaffold139G002150 [Cucumis melo var. makuwa] >TYK...	[more]
XP_008455165.1	4.96e-23	80.88	PREDICTED: uncharacterized protein LOC103495399 [Cucumis melo]	[more]

BLAST of MC00g0011 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKS7	3.66e-30	100.00	uncharacterized protein LOC111012212 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A5A7SPP8	1.47e-23	80.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C099	2.40e-23	80.88	uncharacterized protein LOC103495399 OS=Cucumis melo OX=3656 GN=LOC103495399 PE=...	[more]
A0A0A0K622	1.06e-22	83.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G064570 PE=3 SV=1	[more]
A0A6J1I3G6	7.11e-18	73.53	uncharacterized protein LOC111470651 OS=Cucurbita maxima OX=3661 GN=LOC111470651...	[more]

BLAST of MC00g0011 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14095.1	8.7e-12	57.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 6..26
None	No IPR available	PANTHER	PTHR33735:SF10	EXPRESSED PROTEIN	coord: 1..67
None	No IPR available	PANTHER	PTHR33735	EXPRESSED PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC00g0011.1	MC00g0011.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane