Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTCATAAACTTTCTTTTCTTGTGTTCTTCCTTTTGTTCGGTATTGAAATTTCTACTGCATCCAGAGTTCTATCAACTTTTGGTGAAGGAGGATATGGCAATCCAAGTAGCCTCGGTGATAGTAAGTATAGTTCTATAGAAAAAAATGGTGTTGGAGGCTATGATGGTGAATATGGTGGTGGATATAGTCCAAAAGATTATGGATATGGAAAGTATAAGAATGATTATTATTTGGGTTGGGAAAGGTACGGTAAGGAGAGTACTGATTATGGTTATAGTGTTCCCAAATATGATATTGAAAAAGGTAAAGGGGGTGATTATTATGTTTATGGTGGAGGAAAACGTGGAGGATCATCTAAAGATTATGATACTTATGCAAGTAGCTGCAAAGATGGAGGAGTGTACAAATATCCTAGTTATGGAGACAATGACAAAGGTGGAGAATCACCCAAGAAATATGTTGATTATAGAAATGGTGACAAAGTGGGAGAATCATCCGGAGAATATGGTGGTGATAATGCATACAATGGCAAAACTGGAGCATACAACTATCCTAATTATGAAAATAGTGAGAAAAGTGCAGAATCATCCAAAGAATATGTTGATTACAGAAATGGTGGCAAAGGTAGAAAATCATCCGAAGAATATAGTGGTAGTGCATACAGTGGCAAAGCTGGAGCATACGACTATCCTAATTATGGAAATGGTGAGAAAAGTGGAGAATCATCCAAAGAATATGTTGGTTATAGAAATGGTGGCACAGGTAGAGAATCATCTGAAGAATATAGTGGTAAAGTATATAGTGACAAAGCTGGAGTATACAACTATCCTAGTTATGGAAATGGTGAAAAAAGTGGAGAATCATCCAAAGAATATGTTGATTACAGAAATGGTGGCAAAGGTAGAGAATCATCTGAAGAATATAGTGGTAATGCATACAGTGGCAAAGCTGGAGCATACAACTATCCTAATTATGGAAATGGTGAAAAAAGTGGAGAATCATCCAAAGAATATGTTGATTATAGAACTGGTGGCAAAGTTGTAGCATACAAATATCCTAATTATGGAAATGGTGAAAAAGATGACAAATCATCTAAAAGATATGGTGGCCATCAAGAGAGCAATATATATGGCGGAGGTAGCGGCACTGAACCTTAA
mRNA sequence
ATGGCTTCTCATAAACTTTCTTTTCTTGTGTTCTTCCTTTTGTTCGGTATTGAAATTTCTACTGCATCCAGAGTTCTATCAACTTTTGGTGAAGGAGGATATGGCAATCCAAGTAGCCTCGGTGATAGTAAGTATAGTTCTATAGAAAAAAATGGTGTTGGAGGCTATGATGGTGAATATGGTGGTGGATATAGTCCAAAAGATTATGGATATGGAAAGTATAAGAATGATTATTATTTGGGTTGGGAAAGGTACGGTAAGGAGAGTACTGATTATGGTTATAGTGTTCCCAAATATGATATTGAAAAAGGTAAAGGGGGTGATTATTATGTTTATGGTGGAGGAAAACGTGGAGGATCATCTAAAGATTATGATACTTATGCAAGTAGCTGCAAAGATGGAGGAGTGTACAAATATCCTAGTTATGGAGACAATGACAAAGGTGGAGAATCACCCAAGAAATATGTTGATTATAGAAATGGTGACAAAGTGGGAGAATCATCCGGAGAATATGGTGGTGATAATGCATACAATGGCAAAACTGGAGCATACAACTATCCTAATTATGAAAATAGTGAGAAAAGTGCAGAATCATCCAAAGAATATGTTGATTACAGAAATGGTGGCAAAGGTAGAAAATCATCCGAAGAATATAGTGGTAGTGCATACAGTGGCAAAGCTGGAGCATACGACTATCCTAATTATGGAAATGGTGAGAAAAGTGGAGAATCATCCAAAGAATATGTTGGTTATAGAAATGGTGGCACAGGTAGAGAATCATCTGAAGAATATAGTGGTAAAGTATATAGTGACAAAGCTGGAGTATACAACTATCCTAGTTATGGAAATGGTGAAAAAAGTGGAGAATCATCCAAAGAATATGTTGATTACAGAAATGGTGGCAAAGGTAGAGAATCATCTGAAGAATATAGTGGTAATGCATACAGTGGCAAAGCTGGAGCATACAACTATCCTAATTATGGAAATGGTGAAAAAAGTGGAGAATCATCCAAAGAATATGTTGATTATAGAACTGGTGGCAAAGTTGTAGCATACAAATATCCTAATTATGGAAATGGTGAAAAAGATGACAAATCATCTAAAAGATATGGTGGCCATCAAGAGAGCAATATATATGGCGGAGGTAGCGGCACTGAACCTTAA
Coding sequence (CDS)
ATGGCTTCTCATAAACTTTCTTTTCTTGTGTTCTTCCTTTTGTTCGGTATTGAAATTTCTACTGCATCCAGAGTTCTATCAACTTTTGGTGAAGGAGGATATGGCAATCCAAGTAGCCTCGGTGATAGTAAGTATAGTTCTATAGAAAAAAATGGTGTTGGAGGCTATGATGGTGAATATGGTGGTGGATATAGTCCAAAAGATTATGGATATGGAAAGTATAAGAATGATTATTATTTGGGTTGGGAAAGGTACGGTAAGGAGAGTACTGATTATGGTTATAGTGTTCCCAAATATGATATTGAAAAAGGTAAAGGGGGTGATTATTATGTTTATGGTGGAGGAAAACGTGGAGGATCATCTAAAGATTATGATACTTATGCAAGTAGCTGCAAAGATGGAGGAGTGTACAAATATCCTAGTTATGGAGACAATGACAAAGGTGGAGAATCACCCAAGAAATATGTTGATTATAGAAATGGTGACAAAGTGGGAGAATCATCCGGAGAATATGGTGGTGATAATGCATACAATGGCAAAACTGGAGCATACAACTATCCTAATTATGAAAATAGTGAGAAAAGTGCAGAATCATCCAAAGAATATGTTGATTACAGAAATGGTGGCAAAGGTAGAAAATCATCCGAAGAATATAGTGGTAGTGCATACAGTGGCAAAGCTGGAGCATACGACTATCCTAATTATGGAAATGGTGAGAAAAGTGGAGAATCATCCAAAGAATATGTTGGTTATAGAAATGGTGGCACAGGTAGAGAATCATCTGAAGAATATAGTGGTAAAGTATATAGTGACAAAGCTGGAGTATACAACTATCCTAGTTATGGAAATGGTGAAAAAAGTGGAGAATCATCCAAAGAATATGTTGATTACAGAAATGGTGGCAAAGGTAGAGAATCATCTGAAGAATATAGTGGTAATGCATACAGTGGCAAAGCTGGAGCATACAACTATCCTAATTATGGAAATGGTGAAAAAAGTGGAGAATCATCCAAAGAATATGTTGATTATAGAACTGGTGGCAAAGTTGTAGCATACAAATATCCTAATTATGGAAATGGTGAAAAAGATGACAAATCATCTAAAAGATATGGTGGCCATCAAGAGAGCAATATATATGGCGGAGGTAGCGGCACTGAACCTTAA
Protein sequence
MASHKLSFLVFFLLFGIEISTASRVLSTFGEGGYGNPSSLGDSKYSSIEKNGVGGYDGEYGGGYSPKDYGYGKYKNDYYLGWERYGKESTDYGYSVPKYDIEKGKGGDYYVYGGGKRGGSSKDYDTYASSCKDGGVYKYPSYGDNDKGGESPKKYVDYRNGDKVGESSGEYGGDNAYNGKTGAYNYPNYENSEKSAESSKEYVDYRNGGKGRKSSEEYSGSAYSGKAGAYDYPNYGNGEKSGESSKEYVGYRNGGTGRESSEEYSGKVYSDKAGVYNYPSYGNGEKSGESSKEYVDYRNGGKGRESSEEYSGNAYSGKAGAYNYPNYGNGEKSGESSKEYVDYRTGGKVVAYKYPNYGNGEKDDKSSKRYGGHQESNIYGGGSGTEP
Homology
BLAST of LsiUNG000360 vs. ExPASy TrEMBL
Match:
A0A5A7T532 (Keratin, type I cytoskeletal 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001010 PE=4 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 6.7e-24
Identity = 161/442 (36.43%), Postives = 203/442 (45.93%), Query Frame = 0
Query: 1 MASHKLSF-LVFFLLFGIEISTASRVLSTFGEGGYGNPSSLGDSKYSSIEKNGVGGYDGE 60
MAS +LSF LVFF+LF IEIS ++++ GE YGNPS+ G KY I KNG+GGY +
Sbjct: 1 MASPRLSFSLVFFILFAIEIS----LIASEGE-KYGNPSNFGYRKYGFIGKNGLGGYAEK 60
Query: 61 YGGGYSPKDYGYGKYKNDYYLGWERYGKESTDYGYSVPKYDIEKGKGGDYYVYGGGKRGG 120
Y NDYY W R+ K YS G G GG
Sbjct: 61 -------------NYNNDYY--WGRWRKSDQGSTYS-----------------GNGASGG 120
Query: 121 SSKDYDTYASSC-------------------------KDGGVYKYPSYG--DNDKGGESP 180
SS +YD + SSC K+ G Y PS G N+ GGE+
Sbjct: 121 SSNEYDDHTSSCKSPSNGSGYKSEEPSKENYGNANNGKNAGEYNNPSTGGNSNNGGGEAS 180
Query: 181 KKYVDYR-NGDKVGESSGEYGGDNAYNGKTGAYNYPNYENSEKSAESSKEYVDYRNGGKG 240
K Y NG GE S G N NG G Y SE + +S EY + GG G
Sbjct: 181 KGYSGSEGNGKSGGEYSNPSTGGNGNNG--GGEASKGYSGSEGNGKSGGEYSNPSTGGNG 240
Query: 241 R----KSSEEYSGSAYSGKAGAYDYPNYGNGEK----SGESSKEYVGYRN---------- 300
++S+ YSGS +GK+G +Y N GE GE+SK Y G N
Sbjct: 241 NNGGGEASKGYSGSGSNGKSGG-EYSNPSTGENGNNGGGEASKGYSGSENSGQSGGSGYS 300
Query: 301 --GGTGRESSEEYSGKVYSDKAGVYNYPSYGNGEKSGE--SSKEYVDYRNGGKGRESSEE 360
GG+G +S EE S K Y+ GNG KSGE S+KEY N G G E+S+
Sbjct: 301 NPGGSGYKSGEEPSAKEYNGN---------GNGYKSGEEPSAKEYNGNGNNG-GGEASKG 360
Query: 361 YSGNAYSGKAGA-YNYPNYGNGEKSGESSKEYVDYRTGGKVVA-YKYPNY-GNGEK-DDK 388
YSG+ +GK+G Y+ P+ GN K GE SK+Y + GK Y P+ GNG +
Sbjct: 361 YSGSGSNGKSGGEYSNPSTGNDNKGGEPSKDYSGSGSNGKSGGEYSNPSTGGNGNNGGGE 391
BLAST of LsiUNG000360 vs. ExPASy TrEMBL
Match:
A0A5D3E6D9 (Keratin, type I cytoskeletal 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004520 PE=4 SV=1)
HSP 1 Score: 104.0 bits (258), Expect = 1.4e-18
Identity = 143/402 (35.57%), Postives = 182/402 (45.27%), Query Frame = 0
Query: 32 GGYGNPSSLGDSKYSSIEK------NGVGGYDGEYGGGYSPKDYGYGKYKNDYYLGWERY 91
G Y NPS+ G+ E +G GG G G GYS G YK+ + Y
Sbjct: 331 GEYSNPSTGGNGNNGGGEASKGYSGSGNGGQSG--GSGYSNPSTGGNGYKSGEEPSAKEY 390
Query: 92 GKESTDYGYSVPKYDIEKG----KGGDY---YVYGGGKRGG--SSKDYDTYASSCKDGGV 151
+ G K G GG+Y G G GG +SK Y S+ K GG
Sbjct: 391 NGNGNNGGGEASKGYSGSGSNGKSGGEYSNPSTGGNGNNGGGETSKGYSGSGSNGKSGGG 450
Query: 152 YKYPSYGDNDKGGESPKKYVDYRNGDKVGESSGEYG----GDNAYNGKTGAYNYPNYENS 211
Y PS G+++KGGE K DY G+S GEY G N NG G Y S
Sbjct: 451 YSNPSTGNDNKGGEPSK---DYNGSGSNGKSGGEYSNPSTGGNGNNG--GGEASKGYSGS 510
Query: 212 EKSAESSKEYVDYRNGGKGR----KSSEEYSGSAYSGKAGAYDYPN-YGNGEKSGE--SS 271
+ +S EY + G G ++S+ YSGS SG++G Y N G+G KSGE S+
Sbjct: 511 GSNGKSGGEYSNPSTGENGNNGGGEASKGYSGSENSGQSGGSGYSNPGGSGYKSGEEPSA 570
Query: 272 KEYVGYRNGGTGRESSEEYSGKVYSDKAG--VYNYPSYGNGEKSGESSKEYV-------- 331
KEY G N G G E+S+ YSG S ++G Y+ PS GN K GE SK+Y
Sbjct: 571 KEYNGNGNNG-GGEASKGYSGSGNSGQSGGSGYSNPSTGNDNKGGEPSKDYSGSGSNGKS 630
Query: 332 --DYRN---GGKGRESSE-----EYSGNAYSGKAGAYNYPNYGNGEKSGESSKEYVDYRT 388
+Y N GG G +S E EY+GN GK+ YN P+ G E +G
Sbjct: 631 GGEYSNPSTGGNGYKSGEEPSTKEYNGNMNGGKSEEYNGPSKGGDENNG----------- 690
BLAST of LsiUNG000360 vs. ExPASy TrEMBL
Match:
A0A6J1HIW2 (glycine-rich cell wall structural protein 1.8-like isoform X46 OS=Cucurbita moschata OX=3662 GN=LOC111463951 PE=4 SV=1)
HSP 1 Score: 89.0 bits (219), Expect = 4.8e-14
Identity = 144/433 (33.26%), Postives = 188/433 (43.42%), Query Frame = 0
Query: 1 MASHKLSFLVFFLLFGIEISTASRVLSTFGEGGYGNPSSLGDSKYSSIEKNGVGGY---- 60
MASHKLS LVFFL FGI I +A+R LS+ E GYG+ S G S Y+S+ + GV Y
Sbjct: 3 MASHKLSSLVFFLFFGIGICSAARRLSSSYE-GYGSSSGHGYSSYASVGEYGVENYGNGY 62
Query: 61 --DGEYGGGYSPKDYGYGKYKNDYYLGWERYGKESTDY-GYSVPKYDIEKGK------GG 120
DG YGG Y +Y GKY Y G + +S +Y GYS +++ G+ GG
Sbjct: 63 GKDGAYGGKYG--EYNGGKYGG--YDGGKHERYDSGNYGGYSGGRHEGYDGENYGGYGGG 122
Query: 121 DYYVYGGGKRGGSSK----DYDTYASSCKDGGVY--------------KYPSYGDNDKGG 180
+Y YGGGK GG S+ +YD DGG Y K+ Y GG
Sbjct: 123 NYGGYGGGKYGGYSRGKHEEYDKDKHEGYDGGNYGGYSGGKHEEYDKDKHEGYDGGKYGG 182
Query: 181 ESPKKYVDYRNGDKVGESSGEYGGDNAYNGKTGAYNYPNYENSEKSAESSKEYVDYRNGG 240
K+ +Y G G YGG + G G Y+ +E +K + +Y GG
Sbjct: 183 YGGSKHEEYDKDKHEGYDGGNYGGYS--GGNYGGYSRSKHEEYDKDKHEGYDGGNY--GG 242
Query: 241 KGRKSSEEYSGSAYSGKAGAYDYPNYG--NGEKSGESSKE----YVGYRNGGTGRESSEE 300
EEY+ + G YD YG +G K E K+ Y G + GG EE
Sbjct: 243 YSGGKHEEYNKDKHDG----YDGGKYGGYSGGKHEEYDKDKHEVYDGGKYGGYSGGKHEE 302
Query: 301 YSGKVYSDKAGVYNYPSYG--NGEKSGESSKE----YVDYRNGGKGRESSEEYSGNAYSG 360
Y DK Y+ +YG NG K E K+ Y GG EEY + + G
Sbjct: 303 YE----KDKHEGYDGGNYGGYNGGKYEEYDKDKHEGYDGGNYGGYSGGKHEEYDKDKHEG 362
Query: 361 KAGAYNYPNYGNGEKSGESSKEYVDYRTGGKVVAY--KYPNYGNGEKDDKSSKRYGGHQE 387
G Y YG G K E K+ + GG Y K+ Y G+ + +GG+
Sbjct: 363 YDGG-KYGGYG-GSKHEEYDKDKHEGYDGGNYGGYRSKHEEYDRGKHEGYDGVNHGGYGG 416
BLAST of LsiUNG000360 vs. ExPASy TrEMBL
Match:
A0A6J1HL17 (glycine-rich cell wall structural protein 1.8-like isoform X22 OS=Cucurbita moschata OX=3662 GN=LOC111463951 PE=4 SV=1)
HSP 1 Score: 87.4 bits (215), Expect = 1.4e-13
Identity = 140/432 (32.41%), Postives = 188/432 (43.52%), Query Frame = 0
Query: 1 MASHKLSFLVFFLLFGIEISTASRVLSTFGEGGYGNPSSLGDSKYSSIEKNGVGGY---- 60
MASHKLS LVFFL FGI I +A+R LS+ E GYG+ S G S Y+S+ + GV Y
Sbjct: 3 MASHKLSSLVFFLFFGIGICSAARRLSSSYE-GYGSSSGHGYSSYASVGEYGVENYGNGY 62
Query: 61 --DGEYGGGYSPKDYGYGKYKNDYYLGWERYGKESTDY-GYSVPKYDIEKGKGGDYYVYG 120
DG YGG Y +Y GKY Y G + +S +Y GYS ++ E G +Y YG
Sbjct: 63 GKDGAYGGKYG--EYNGGKYGG--YDGGKHERYDSGNYGGYSGGRH--EGYDGENYGGYG 122
Query: 121 GGKR----GGSSKDYDTYASSCKDGGVY--------------KYPSYGDNDKGGESPKKY 180
GGK GG K Y DGG Y K+ Y + GG KY
Sbjct: 123 GGKHEEYGGGKHKGY--------DGGNYGGYGFGKHEEYDKDKHEGYNGGNYGGYGGGKY 182
Query: 181 VDYRNGDKVGESSGEYGGDNAYNGKTGAYNYPNYENSEKSAESSKEYVDYR--NGGK--- 240
+Y G+ G G + + GK Y+ +E +K + +YR +GGK
Sbjct: 183 EEYDRGNYGGFGGGRH--EEYDRGKHEEYDKGKHEEYDKDKHEGYDRGNYRGYDGGKHEE 242
Query: 241 -GRKSSEEYSGSAYSGKAGAYDYPNYG--NGEKSGESSKE----YVGYRNGGTGRESSEE 300
GR EEY + G YD NYG +G K E K+ Y G + GG G EE
Sbjct: 243 YGRGKHEEYDKDKHEG----YDGGNYGGYSGGKHEEYDKDKHEGYDGGKYGGYGGSKHEE 302
Query: 301 YSGKVYSDKAGVYNYPSYGNGEKSGESSKEYVDYRNGGKGRESSEEYSGNAYSGKAGAYN 360
Y + G NY Y G G S ++ +Y ++ E Y G Y G +G
Sbjct: 303 YDKDKHEGYDG-GNYGGYSGGNYGGYSRSKHEEY-----DKDKHEGYDGGNYGGYSGG-K 362
Query: 361 YPNYGNGEKSGESSKEYVDYRTGGKVVAY-----------KYPNYGNGEKDDKSSKRYGG 385
+ Y + G +Y Y +GGK Y KY Y G+ ++ ++ G
Sbjct: 363 HEEYNKDKHDGYDGGKYGGY-SGGKHEEYDKDKHEVYDGGKYGGYSGGKHEEYEKDKHEG 404
BLAST of LsiUNG000360 vs. ExPASy TrEMBL
Match:
A0A6J1HIT1 (uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X18 OS=Cucurbita moschata OX=3662 GN=LOC111463951 PE=4 SV=1)
HSP 1 Score: 87.4 bits (215), Expect = 1.4e-13
Identity = 139/436 (31.88%), Postives = 186/436 (42.66%), Query Frame = 0
Query: 1 MASHKLSFLVFFLLFGIEISTASRVLSTFGEGGYGNPSSLGDSKYSSIEKNGVGGY---- 60
MASHKLS LVFFL FGI I +A+R LS+ E GYG+ S G S Y+S+ + GV Y
Sbjct: 3 MASHKLSSLVFFLFFGIGICSAARRLSSSYE-GYGSSSGHGYSSYASVGEYGVENYGNGY 62
Query: 61 --DGEYGGGYSPKDYGYGKYKNDYYLGWERYGKESTDY-GYSVPKYDIEKGKGGDYYVYG 120
DG YGG Y +Y GKY Y G + +S +Y GYS ++ E G +Y YG
Sbjct: 63 GKDGAYGGKYG--EYNGGKYGG--YDGGKHERYDSGNYGGYSGGRH--EGYDGENYGGYG 122
Query: 121 GGKR----GGSSKDYDTYASSCKDGGVY--------------KYPSYGDNDKGGESPKKY 180
GGK GG K Y DGG Y K+ Y + GG KY
Sbjct: 123 GGKHEEYGGGKHKGY--------DGGNYGGYGFGKHEEYDKDKHEGYNGGNYGGYGGGKY 182
Query: 181 VDYRNGDKVGESSGEYGGDNAYNGKTGAYNYPNYENSEKSAESSKEYVDYR--NGGK--- 240
+Y G+ G G + + GK Y+ +E +K + +YR +GGK
Sbjct: 183 EEYDRGNYGGFGGGRH--EEYDRGKHEEYDKGKHEEYDKDKHEGYDRGNYRGYDGGKHEE 242
Query: 241 -GRKSSEEYSGSAYSGKAGA----YD---YPNYGNGEKSGESSKEYVGY---RNGGTGRE 300
GR E Y G Y G G YD + Y G+ G Y GY + GG G
Sbjct: 243 YGRGKHEGYDGGNYGGYGGGKHDEYDRGKHEEYDKGKHEGYEGGNYGGYGGGKYGGYGGS 302
Query: 301 SSEEYSGKVYSDKAGVYNYPSYGNGEKSGESSKEYVDYRNGGKGRESSEEYSGNAYSGKA 360
EEY + G NY Y G G S ++ +Y ++ E Y G Y G +
Sbjct: 303 KHEEYDKDKHEGYDG-GNYGGYSGGNYGGYSRSKHEEY-----DKDKHEGYDGGNYGGYS 362
Query: 361 GAYNYPNYGNGEKSGESSKEYVDYRTGGKVVAY-----------KYPNYGNGEKDDKSSK 385
G + Y + G +Y Y +GGK Y KY Y G+ ++
Sbjct: 363 GG-KHEEYNKDKHDGYDGGKYGGY-SGGKHEEYDKDKHEVYDGGKYGGYSGGKHEEYEKD 412
BLAST of LsiUNG000360 vs. NCBI nr
Match:
XP_038887039.1 (shematrin-like protein 2 [Benincasa hispida])
HSP 1 Score: 181.4 bits (459), Expect = 1.5e-41
Identity = 114/232 (49.14%), Postives = 139/232 (59.91%), Query Frame = 0
Query: 1 MASHKLSFLVFFLLFGIEISTASRVLSTFGEGGYGNPSSLGDSKYSSIEKNGVGGYDGEY 60
MAS+KLS LVF LLFGIEIS A+R L+T+ +G YGNPS+ + Y+ + +NGV G Y
Sbjct: 1 MASYKLSSLVFLLLFGIEISIATRALTTYSQGEYGNPSTYSNGGYNYVGENGV----GRY 60
Query: 61 GGGYSPKDYGYGKYKNDYYLGWERYGKESTDYGYSVPKYDIEKGKG---------GDYYV 120
GGY+PK YGYGKYKNDYY G E+YG+ +T +GY V YD K KG G Y
Sbjct: 61 AGGYTPKGYGYGKYKNDYYSGREKYGQGTTSFGYGVSGYDTGKSKGNDDDYSEQYGQGYG 120
Query: 121 YGGGKRGGSSKDYDTYASSCKDGGVYKYPSYGDNDKGGESPKKYVDYRNGDKVGESSGEY 180
GGGKRGGS +Y++YAS CKDGGV YPSYG ++KGGE K+Y
Sbjct: 121 DGGGKRGGSFNEYNSYASGCKDGGVNNYPSYGYDEKGGEMSKEY---------------- 180
Query: 181 GGDNAYNGKTG-AYNYPNYENSEKSAESSKEYVDYRNGGKGRKSSEEYSGSA 223
DN Y GK+G Y YPNY K +S KEY GR+ S Y G +
Sbjct: 181 -NDNRYGGKSGEMYEYPNYGAGNKGDKSYKEY-------GGRQGSSAYDGDS 204
BLAST of LsiUNG000360 vs. NCBI nr
Match:
XP_038887038.1 (heterogeneous nuclear ribonucleoprotein A3-like [Benincasa hispida])
HSP 1 Score: 142.5 bits (358), Expect = 7.6e-30
Identity = 103/206 (50.00%), Postives = 121/206 (58.74%), Query Frame = 0
Query: 16 GIEISTASRVLSTFGEGGYGNPSSLGDSKYSSIEKNGVGGYDGEYGGGYSPKDYGYGKYK 75
GI+I A+RVL+T EGGYG PSS + + +NGV G YGG Y+PK YGYGKY
Sbjct: 2 GIQICLAARVLTTSDEGGYGYPSS-----GAFVGENGV----GSYGGDYNPKGYGYGKYG 61
Query: 76 NDYYLGWERYGKESTDYGY-SVPKYDIE-KGKGGDYYVY---------GGGKRGGSSKDY 135
NDYY GW YG+ ST GY S P Y+ K KGG+Y Y GGG+RGGS K Y
Sbjct: 62 NDYYNGWRWYGQGSTISGYGSAPGYEYNGKDKGGEYDYYEQYGQGYGGGGGERGGSFKGY 121
Query: 136 DTYASSCKDGGVYKYPSYGDNDKGGESPKKYVDYRNGDKVGESSGEYGGDNAYNGKTGAY 195
D+ S DGG Y Y SYG+N+K ES K Y YR G K ES EYGG+ + K G
Sbjct: 122 DSRTS---DGGAYNYRSYGNNEKTRESSKDYFGYRYGGKSRESFKEYGGNELNSEKWGGM 181
Query: 196 N-YPNYENSEKSAESSKEYVDYRNGG 210
N YP Y NS K +SS+EY GG
Sbjct: 182 NKYPYYGNSNKDEKSSQEYSGGIYGG 195
BLAST of LsiUNG000360 vs. NCBI nr
Match:
KAA0038572.1 (keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa])
HSP 1 Score: 121.7 bits (304), Expect = 1.4e-23
Identity = 161/442 (36.43%), Postives = 203/442 (45.93%), Query Frame = 0
Query: 1 MASHKLSF-LVFFLLFGIEISTASRVLSTFGEGGYGNPSSLGDSKYSSIEKNGVGGYDGE 60
MAS +LSF LVFF+LF IEIS ++++ GE YGNPS+ G KY I KNG+GGY +
Sbjct: 1 MASPRLSFSLVFFILFAIEIS----LIASEGE-KYGNPSNFGYRKYGFIGKNGLGGYAEK 60
Query: 61 YGGGYSPKDYGYGKYKNDYYLGWERYGKESTDYGYSVPKYDIEKGKGGDYYVYGGGKRGG 120
Y NDYY W R+ K YS G G GG
Sbjct: 61 -------------NYNNDYY--WGRWRKSDQGSTYS-----------------GNGASGG 120
Query: 121 SSKDYDTYASSC-------------------------KDGGVYKYPSYG--DNDKGGESP 180
SS +YD + SSC K+ G Y PS G N+ GGE+
Sbjct: 121 SSNEYDDHTSSCKSPSNGSGYKSEEPSKENYGNANNGKNAGEYNNPSTGGNSNNGGGEAS 180
Query: 181 KKYVDYR-NGDKVGESSGEYGGDNAYNGKTGAYNYPNYENSEKSAESSKEYVDYRNGGKG 240
K Y NG GE S G N NG G Y SE + +S EY + GG G
Sbjct: 181 KGYSGSEGNGKSGGEYSNPSTGGNGNNG--GGEASKGYSGSEGNGKSGGEYSNPSTGGNG 240
Query: 241 R----KSSEEYSGSAYSGKAGAYDYPNYGNGEK----SGESSKEYVGYRN---------- 300
++S+ YSGS +GK+G +Y N GE GE+SK Y G N
Sbjct: 241 NNGGGEASKGYSGSGSNGKSGG-EYSNPSTGENGNNGGGEASKGYSGSENSGQSGGSGYS 300
Query: 301 --GGTGRESSEEYSGKVYSDKAGVYNYPSYGNGEKSGE--SSKEYVDYRNGGKGRESSEE 360
GG+G +S EE S K Y+ GNG KSGE S+KEY N G G E+S+
Sbjct: 301 NPGGSGYKSGEEPSAKEYNGN---------GNGYKSGEEPSAKEYNGNGNNG-GGEASKG 360
Query: 361 YSGNAYSGKAGA-YNYPNYGNGEKSGESSKEYVDYRTGGKVVA-YKYPNY-GNGEK-DDK 388
YSG+ +GK+G Y+ P+ GN K GE SK+Y + GK Y P+ GNG +
Sbjct: 361 YSGSGSNGKSGGEYSNPSTGNDNKGGEPSKDYSGSGSNGKSGGEYSNPSTGGNGNNGGGE 391
BLAST of LsiUNG000360 vs. NCBI nr
Match:
TYK31171.1 (keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa])
HSP 1 Score: 104.0 bits (258), Expect = 3.0e-18
Identity = 143/402 (35.57%), Postives = 182/402 (45.27%), Query Frame = 0
Query: 32 GGYGNPSSLGDSKYSSIEK------NGVGGYDGEYGGGYSPKDYGYGKYKNDYYLGWERY 91
G Y NPS+ G+ E +G GG G G GYS G YK+ + Y
Sbjct: 331 GEYSNPSTGGNGNNGGGEASKGYSGSGNGGQSG--GSGYSNPSTGGNGYKSGEEPSAKEY 390
Query: 92 GKESTDYGYSVPKYDIEKG----KGGDY---YVYGGGKRGG--SSKDYDTYASSCKDGGV 151
+ G K G GG+Y G G GG +SK Y S+ K GG
Sbjct: 391 NGNGNNGGGEASKGYSGSGSNGKSGGEYSNPSTGGNGNNGGGETSKGYSGSGSNGKSGGG 450
Query: 152 YKYPSYGDNDKGGESPKKYVDYRNGDKVGESSGEYG----GDNAYNGKTGAYNYPNYENS 211
Y PS G+++KGGE K DY G+S GEY G N NG G Y S
Sbjct: 451 YSNPSTGNDNKGGEPSK---DYNGSGSNGKSGGEYSNPSTGGNGNNG--GGEASKGYSGS 510
Query: 212 EKSAESSKEYVDYRNGGKGR----KSSEEYSGSAYSGKAGAYDYPN-YGNGEKSGE--SS 271
+ +S EY + G G ++S+ YSGS SG++G Y N G+G KSGE S+
Sbjct: 511 GSNGKSGGEYSNPSTGENGNNGGGEASKGYSGSENSGQSGGSGYSNPGGSGYKSGEEPSA 570
Query: 272 KEYVGYRNGGTGRESSEEYSGKVYSDKAG--VYNYPSYGNGEKSGESSKEYV-------- 331
KEY G N G G E+S+ YSG S ++G Y+ PS GN K GE SK+Y
Sbjct: 571 KEYNGNGNNG-GGEASKGYSGSGNSGQSGGSGYSNPSTGNDNKGGEPSKDYSGSGSNGKS 630
Query: 332 --DYRN---GGKGRESSE-----EYSGNAYSGKAGAYNYPNYGNGEKSGESSKEYVDYRT 388
+Y N GG G +S E EY+GN GK+ YN P+ G E +G
Sbjct: 631 GGEYSNPSTGGNGYKSGEEPSTKEYNGNMNGGKSEEYNGPSKGGDENNG----------- 690
BLAST of LsiUNG000360 vs. NCBI nr
Match:
XP_022963750.1 (glycine-rich cell wall structural protein 1.8-like isoform X46 [Cucurbita moschata])
HSP 1 Score: 89.0 bits (219), Expect = 9.9e-14
Identity = 144/433 (33.26%), Postives = 188/433 (43.42%), Query Frame = 0
Query: 1 MASHKLSFLVFFLLFGIEISTASRVLSTFGEGGYGNPSSLGDSKYSSIEKNGVGGY---- 60
MASHKLS LVFFL FGI I +A+R LS+ E GYG+ S G S Y+S+ + GV Y
Sbjct: 3 MASHKLSSLVFFLFFGIGICSAARRLSSSYE-GYGSSSGHGYSSYASVGEYGVENYGNGY 62
Query: 61 --DGEYGGGYSPKDYGYGKYKNDYYLGWERYGKESTDY-GYSVPKYDIEKGK------GG 120
DG YGG Y +Y GKY Y G + +S +Y GYS +++ G+ GG
Sbjct: 63 GKDGAYGGKYG--EYNGGKYGG--YDGGKHERYDSGNYGGYSGGRHEGYDGENYGGYGGG 122
Query: 121 DYYVYGGGKRGGSSK----DYDTYASSCKDGGVY--------------KYPSYGDNDKGG 180
+Y YGGGK GG S+ +YD DGG Y K+ Y GG
Sbjct: 123 NYGGYGGGKYGGYSRGKHEEYDKDKHEGYDGGNYGGYSGGKHEEYDKDKHEGYDGGKYGG 182
Query: 181 ESPKKYVDYRNGDKVGESSGEYGGDNAYNGKTGAYNYPNYENSEKSAESSKEYVDYRNGG 240
K+ +Y G G YGG + G G Y+ +E +K + +Y GG
Sbjct: 183 YGGSKHEEYDKDKHEGYDGGNYGGYS--GGNYGGYSRSKHEEYDKDKHEGYDGGNY--GG 242
Query: 241 KGRKSSEEYSGSAYSGKAGAYDYPNYG--NGEKSGESSKE----YVGYRNGGTGRESSEE 300
EEY+ + G YD YG +G K E K+ Y G + GG EE
Sbjct: 243 YSGGKHEEYNKDKHDG----YDGGKYGGYSGGKHEEYDKDKHEVYDGGKYGGYSGGKHEE 302
Query: 301 YSGKVYSDKAGVYNYPSYG--NGEKSGESSKE----YVDYRNGGKGRESSEEYSGNAYSG 360
Y DK Y+ +YG NG K E K+ Y GG EEY + + G
Sbjct: 303 YE----KDKHEGYDGGNYGGYNGGKYEEYDKDKHEGYDGGNYGGYSGGKHEEYDKDKHEG 362
Query: 361 KAGAYNYPNYGNGEKSGESSKEYVDYRTGGKVVAY--KYPNYGNGEKDDKSSKRYGGHQE 387
G Y YG G K E K+ + GG Y K+ Y G+ + +GG+
Sbjct: 363 YDGG-KYGGYG-GSKHEEYDKDKHEGYDGGNYGGYRSKHEEYDRGKHEGYDGVNHGGYGG 416
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T532 | 6.7e-24 | 36.43 | Keratin, type I cytoskeletal 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6... | [more] |
A0A5D3E6D9 | 1.4e-18 | 35.57 | Keratin, type I cytoskeletal 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A6J1HIW2 | 4.8e-14 | 33.26 | glycine-rich cell wall structural protein 1.8-like isoform X46 OS=Cucurbita mosc... | [more] |
A0A6J1HL17 | 1.4e-13 | 32.41 | glycine-rich cell wall structural protein 1.8-like isoform X22 OS=Cucurbita mosc... | [more] |
A0A6J1HIT1 | 1.4e-13 | 31.88 | uncharacterized PE-PGRS family protein PE_PGRS54-like isoform X18 OS=Cucurbita m... | [more] |
Match Name | E-value | Identity | Description | |
XP_038887039.1 | 1.5e-41 | 49.14 | shematrin-like protein 2 [Benincasa hispida] | [more] |
XP_038887038.1 | 7.6e-30 | 50.00 | heterogeneous nuclear ribonucleoprotein A3-like [Benincasa hispida] | [more] |
KAA0038572.1 | 1.4e-23 | 36.43 | keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa] | [more] |
TYK31171.1 | 3.0e-18 | 35.57 | keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa] | [more] |
XP_022963750.1 | 9.9e-14 | 33.26 | glycine-rich cell wall structural protein 1.8-like isoform X46 [Cucurbita moscha... | [more] |
Match Name | E-value | Identity | Description | |