Lsi11G016840 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi11G016840
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTCP transcription factor
Locationchr11: 25053784 .. 25054647 (-)
RNA-Seq ExpressionLsi11G016840
SyntenyLsi11G016840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGACCAGCGCTGGCGGCGAGATTGTTCCAGTCCAAGGTGGCCACATCCTCTGCTCCACCGGCAAGAAAGACCGTCATAGTAAGGTCTTCACCGCCAAAGGCCCTCGCGACCGTCGTGTCAGATTGTCGGCTCATACCGCCATCCAATTCTACGATGTGCAGGACCGATTGGGTTACGATCGACCCAGTAAAGCCGTCGATTGGCTAATTATGAAGGCCAAATTCGCTATTGATAAGCTTCAAGAACTTCCCCCTTATTTTTCCATTGCCAATGGCTTCATAGACCCAAATCCCAAAACAGGGGAAACAGAGTCCTCTGAATTTGGTTCCCAGTTACAGTTGCAATCCACCGCCGGAAACTTCGTTCCGCCGCTAGAATCTTTATTTCCGATCAGCTCTACAACCACGTCCACTAATTTTGAGGGTTATCCGATGAATTTGATTTTGAGACCCATTGACCTGGCTCGAGATCTCGCCCTCTCTCTCCATAACCTCCATGATTCTCGCCTAATTCCCTCGGAGGAAGATGGAAGTCATTCACCGGCAAATGACCAACGACTTATTTCCGATTCGATTCTGGCAGGGTACGAAGGAGAAAACGCTGGATTGTGGCTGCAGCAGCCATTGTTACGGCAAAATTCGGCAACGGCGTTTTCCCAGAGGATGTCGCTTCAGGCCAATTTGGGGCATTCATCACTGTCGATTCGTGGTTGGAGCAGTCAGAATCGACAGTCGTCGGTGCTCGATGGCCGAAATGATGGGTCATCGGAGTTGCGTACGCCGTCACGGATTCGAGGTGAGGGTGGGGAAGACAACGTCGTTTCAGGGACTCATTCGTCGCCGCCAAATTATTGTCGATAG

mRNA sequence

ATGAAGACCAGCGCTGGCGGCGAGATTGTTCCAGTCCAAGGTGGCCACATCCTCTGCTCCACCGGCAAGAAAGACCGTCATAGTAAGGTCTTCACCGCCAAAGGCCCTCGCGACCGTCGTGTCAGATTGTCGGCTCATACCGCCATCCAATTCTACGATGTGCAGGACCGATTGGGTTACGATCGACCCAGTAAAGCCGTCGATTGGCTAATTATGAAGGCCAAATTCGCTATTGATAAGCTTCAAGAACTTCCCCCTTATTTTTCCATTGCCAATGGCTTCATAGACCCAAATCCCAAAACAGGGGAAACAGAGTCCTCTGAATTTGGTTCCCAGTTACAGTTGCAATCCACCGCCGGAAACTTCGTTCCGCCGCTAGAATCTTTATTTCCGATCAGCTCTACAACCACGTCCACTAATTTTGAGGGTTATCCGATGAATTTGATTTTGAGACCCATTGACCTGGCTCGAGATCTCGCCCTCTCTCTCCATAACCTCCATGATTCTCGCCTAATTCCCTCGGAGGAAGATGGAAGTCATTCACCGGCAAATGACCAACGACTTATTTCCGATTCGATTCTGGCAGGGTACGAAGGAGAAAACGCTGGATTGTGGCTGCAGCAGCCATTGTTACGGCAAAATTCGGCAACGGCGTTTTCCCAGAGGATGTCGCTTCAGGCCAATTTGGGGCATTCATCACTGTCGATTCGTGGTTGGAGCAGTCAGAATCGACAGTCGTCGGTGCTCGATGGCCGAAATGATGGGTCATCGGAGTTGCGTACGCCGTCACGGATTCGAGGTGAGGGTGGGGAAGACAACGTCGTTTCAGGGACTCATTCGTCGCCGCCAAATTATTGTCGATAG

Coding sequence (CDS)

ATGAAGACCAGCGCTGGCGGCGAGATTGTTCCAGTCCAAGGTGGCCACATCCTCTGCTCCACCGGCAAGAAAGACCGTCATAGTAAGGTCTTCACCGCCAAAGGCCCTCGCGACCGTCGTGTCAGATTGTCGGCTCATACCGCCATCCAATTCTACGATGTGCAGGACCGATTGGGTTACGATCGACCCAGTAAAGCCGTCGATTGGCTAATTATGAAGGCCAAATTCGCTATTGATAAGCTTCAAGAACTTCCCCCTTATTTTTCCATTGCCAATGGCTTCATAGACCCAAATCCCAAAACAGGGGAAACAGAGTCCTCTGAATTTGGTTCCCAGTTACAGTTGCAATCCACCGCCGGAAACTTCGTTCCGCCGCTAGAATCTTTATTTCCGATCAGCTCTACAACCACGTCCACTAATTTTGAGGGTTATCCGATGAATTTGATTTTGAGACCCATTGACCTGGCTCGAGATCTCGCCCTCTCTCTCCATAACCTCCATGATTCTCGCCTAATTCCCTCGGAGGAAGATGGAAGTCATTCACCGGCAAATGACCAACGACTTATTTCCGATTCGATTCTGGCAGGGTACGAAGGAGAAAACGCTGGATTGTGGCTGCAGCAGCCATTGTTACGGCAAAATTCGGCAACGGCGTTTTCCCAGAGGATGTCGCTTCAGGCCAATTTGGGGCATTCATCACTGTCGATTCGTGGTTGGAGCAGTCAGAATCGACAGTCGTCGGTGCTCGATGGCCGAAATGATGGGTCATCGGAGTTGCGTACGCCGTCACGGATTCGAGGTGAGGGTGGGGAAGACAACGTCGTTTCAGGGACTCATTCGTCGCCGCCAAATTATTGTCGATAG

Protein sequence

MKTSAGGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIMKAKFAIDKLQELPPYFSIANGFIDPNPKTGETESSEFGSQLQLQSTAGNFVPPLESLFPISSTTTSTNFEGYPMNLILRPIDLARDLALSLHNLHDSRLIPSEEDGSHSPANDQRLISDSILAGYEGENAGLWLQQPLLRQNSATAFSQRMSLQANLGHSSLSIRGWSSQNRQSSVLDGRNDGSSELRTPSRIRGEGGEDNVVSGTHSSPPNYCR
Homology
[Close]
BLAST of Lsi11G016840 vs. ExPASy Swiss-Prot
Match: O82277 (Transcription factor TCP10 OS=Arabidopsis thaliana OX=3702 GN=TCP10 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.6e-38
Identity = 97/175 (55.43%), Postives = 116/175 (66.29%), Query Frame = 0 

Query: 6   GGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSK 65
           GGEIV VQGGHI+ +TG+KDRHSKVFT+KGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSK
Sbjct: 12  GGEIVEVQGGHIIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSK 71

Query: 66  AVDWLIMKAKFAIDKLQELPPYFSIANGFIDPNPK-TGETESSEFGSQLQLQSTAGNFVP 125
           AVDWLI KAK AIDKL EL    +        N K    T   +  +  Q Q  A N  P
Sbjct: 72  AVDWLIKKAKTAIDKL-ELGETTTTTTRQEPVNTKPESPTLVFQRENNDQTQFVAANLDP 131

Query: 126 --PLESLFPISSTT-----TSTNFEGYP----MNLILR----PIDLARDLALSLH 165
              +++ FP ++TT     T+ NF+ YP     N++ R    P +L++DL LSLH
Sbjct: 132 EDAMKTFFPATTTTNGGGGTNINFQNYPHQDDNNMVSRTTTPPPNLSQDLGLSLH 185

[Close]
BLAST of Lsi11G016840 vs. ExPASy Swiss-Prot
Match: Q8LPR5 (Transcription factor TCP4 OS=Arabidopsis thaliana OX=3702 GN=TCP4 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-35
Identity = 98/207 (47.34%), Postives = 119/207 (57.49%), Query Frame = 0 

Query: 7   GEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 66
           GEIV VQGGHI+ STG+KDRHSKV TAKGPRDRRVRLSAHTAIQFYDVQDRLG+DRPSKA
Sbjct: 29  GEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKA 88

Query: 67  VDWLIMKAKFAIDKLQELPPY-----FSIANGFIDPNPKTGETESS-------EFGSQLQ 126
           VDWLI KAK +ID+L ELPP+       +A     P   T +T+ S       +   Q Q
Sbjct: 89  VDWLIKKAKTSIDELAELPPWNPADAIRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQ 148

Query: 127 LQSTAG--------------NFVPP----------LESLFPI--SSTTTSTN-------F 169
           LQ   G              +F+PP          ++S FP+  SST   +N        
Sbjct: 149 LQFGVGFNGGGAEHPSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYH 208

[Close]
BLAST of Lsi11G016840 vs. ExPASy Swiss-Prot
Match: A2WM14 (Transcription factor PCF5 OS=Oryza sativa subsp. indica OX=39946 GN=PCF5 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.1e-35
Identity = 96/205 (46.83%), Postives = 117/205 (57.07%), Query Frame = 0 

Query: 6   GGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSK 65
           GGEIV VQGGHI+ STG+KDRHSKV TA+GPRDRRVRLSAHTAIQFYDVQDRLGYDRPSK
Sbjct: 196 GGEIVAVQGGHIVRSTGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSK 255

Query: 66  AVDWLIMKAKFAIDKLQELPPYFSIA------NGFIDPNPKTGETESSEFGSQLQLQSTA 125
           AVDWLI  AK AIDKL  LP +   A      N    P+  T    +     Q Q  + A
Sbjct: 256 AVDWLIKNAKDAIDKLDVLPAWQPTAGGAGAGNAAAPPSSSTHPDSAENSDDQAQAITVA 315

Query: 126 -------------GNFVPP----------LESLFPI--------SSTTTST-----NFEG 169
                         +F+PP          ++S FP+        SS+TT+       F+ 
Sbjct: 316 HTAFDFAGGGSGGTSFLPPSLDSDAIADTIKSFFPMGGTAGGEASSSTTAAQSSAMGFQS 375

[Close]
BLAST of Lsi11G016840 vs. ExPASy Swiss-Prot
Match: Q8LT07 (Transcription factor PCF5 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF5 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.1e-35
Identity = 96/205 (46.83%), Postives = 117/205 (57.07%), Query Frame = 0 

Query: 6   GGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSK 65
           GGEIV VQGGHI+ STG+KDRHSKV TA+GPRDRRVRLSAHTAIQFYDVQDRLGYDRPSK
Sbjct: 72  GGEIVAVQGGHIVRSTGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSK 131

Query: 66  AVDWLIMKAKFAIDKLQELPPYFSIA------NGFIDPNPKTGETESSEFGSQLQLQSTA 125
           AVDWLI  AK AIDKL  LP +   A      N    P+  T    +     Q Q  + A
Sbjct: 132 AVDWLIKNAKDAIDKLDVLPAWQPTAGGAGAGNAAAPPSSSTHPDSAENSDDQAQAITVA 191

Query: 126 -------------GNFVPP----------LESLFPI--------SSTTTST-----NFEG 169
                         +F+PP          ++S FP+        SS+TT+       F+ 
Sbjct: 192 HTAFDFAGGGSGGTSFLPPSLDSDAIADTIKSFFPMGGTAGGEASSSTTAAQSSAMGFQS 251

[Close]
BLAST of Lsi11G016840 vs. ExPASy Swiss-Prot
Match: Q9MAH8 (Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.9e-35
Identity = 98/218 (44.95%), Postives = 125/218 (57.34%), Query Frame = 0 

Query: 7   GEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 66
           GEIV VQGGHI+ STG+KDRHSKV TAKGPRDRRVRLSA TAIQFYDVQDRLG+DRPSKA
Sbjct: 33  GEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKA 92

Query: 67  VDWLIMKAKFAIDKLQELPPY----------FSIANG--------FIDPNPKTGETESSE 126
           VDWLI KAK AID L +LPP+           + AN            P P+  ETE   
Sbjct: 93  VDWLITKAKSAIDDLAQLPPWNPADTLRQHAAAAANAKPRKTKTLISPPPPQPEETEHHR 152

Query: 127 FGSQLQLQST-------AGNFVPPLESLFPISSTTTSTNFEGYPMNLILRPIDLARDLAL 186
            G +   +S+       + +    ++S FP++ST  S + +  P     +  DL R   L
Sbjct: 153 IGEEEDNESSFLPASMDSDSIADTIKSFFPVASTQQSYHHQP-PSRGNTQNQDLLR---L 212

Query: 187 SLHNLHDSRLIPSE-EDGSHSPANDQRLISDSILAGYE 199
           SL +  +    P++ E    S  ++ +L  DS  A +E
Sbjct: 213 SLQSFQNGPPFPNQTEPALFSGQSNNQLAFDSSTASWE 246

[Close]
BLAST of Lsi11G016840 vs. ExPASy TrEMBL
Match: A0A6J1JNV1 (transcription factor TCP10-like OS=Cucurbita maxima OX=3661 GN=LOC111486387 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.5e-100
Identity = 196/287 (68.29%), Postives = 220/287 (76.66%), Query Frame = 0 

Query: 1   MKTSAGGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGY 60
           MKTSA  EIVPVQGGHI+ ST +KDRHSKVFTAKGPRDRRVRLSAHTAI+FYDVQD+LGY
Sbjct: 1   MKTSAAAEIVPVQGGHIIRSTARKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDQLGY 60

Query: 61  DRPSKAVDWLIMKAKFAIDKLQELPPYFSIANGFIDPNPKTGETESSEFGSQLQLQSTAG 120
           DRPSKAVDWLI KAKFAIDKL+ELPPY  IA+GF DPN KTGE E+       +LQS  G
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLRELPPYSPIAHGFADPNRKTGERET----ESTELQSAVG 120

Query: 121 NFVPPLESLFPISSTTTSTNFEGYPMNLILRPIDLARDLALSLHNLHDSRLIPSEEDGSH 180
           +F P LE  FP +S TTS NF+GYP++LIL P D  RDLALSLHN HDSRLIPSE++ + 
Sbjct: 121 HFAPSLEPFFPTTSATTSINFQGYPVDLILTPTDPPRDLALSLHNFHDSRLIPSEQNANS 180

Query: 181 SPANDQRLISDSILAGYEGENAGLWLQQPLLRQNSATAFSQRMSLQANLGHSSLSIRGWS 240
           SP N QRLI DSI AGYEG +AGLWLQQPL+ QNS  AFSQ            + + GWS
Sbjct: 181 SPGNYQRLIGDSIPAGYEGGDAGLWLQQPLMEQNSTAAFSQ------------VPMHGWS 240

Query: 241 SQNRQSSVLDGRNDGSSELRTPSRIRGEGGEDNVVSGTHSSPPNYCR 288
           +Q RQS+   GR +G SE  TPSRIRGEG ED VVSG+HSS PNY R
Sbjct: 241 NQIRQSAGHGGRFEGPSEFCTPSRIRGEGVEDGVVSGSHSSSPNYHR 271

[Close]
BLAST of Lsi11G016840 vs. ExPASy TrEMBL
Match: A0A6J1ES58 (transcription factor TCP10-like OS=Cucurbita moschata OX=3662 GN=LOC111437241 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 2.1e-99
Identity = 194/287 (67.60%), Postives = 218/287 (75.96%), Query Frame = 0 

Query: 1   MKTSAGGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGY 60
           MK+SA  EIVPVQGGHI+ ST +KDRHSKVFT+KGPRDRRVRLSAHTAI+FYDVQD+LGY
Sbjct: 1   MKSSAAAEIVPVQGGHIIRSTARKDRHSKVFTSKGPRDRRVRLSAHTAIRFYDVQDQLGY 60

Query: 61  DRPSKAVDWLIMKAKFAIDKLQELPPYFSIANGFIDPNPKTGETESSEFGSQLQLQSTAG 120
           DRPSKAVDWLI KAKFAIDKL+ELPPY  IANGF DPN KTGETE+       +LQS  G
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLRELPPYSPIANGFADPNQKTGETET----ESSELQSAVG 120

Query: 121 NFVPPLESLFPISSTTTSTNFEGYPMNLILRPIDLARDLALSLHNLHDSRLIPSEEDGSH 180
           +F P LE  FP +S TTS NF+GYP++LIL P D  RDLALSLHN H+SRLIPSE++ + 
Sbjct: 121 HFAPSLEPFFPTTSATTSINFQGYPVDLILTPTDPPRDLALSLHNFHESRLIPSEQNANS 180

Query: 181 SPANDQRLISDSILAGYEGENAGLWLQQPLLRQNSATAFSQRMSLQANLGHSSLSIRGWS 240
           SP N QRLI DSI AGYEG +AGLWLQQPL+ QNS  AFSQ            + + GWS
Sbjct: 181 SPGNYQRLIGDSIPAGYEGGDAGLWLQQPLMGQNSTAAFSQ------------VQMHGWS 240

Query: 241 SQNRQSSVLDGRNDGSSELRTPSRIRGEGGEDNVVSGTHSSPPNYCR 288
            Q RQS+   GR  G SE  TPSRIRGEG ED VV G+HSS PNY R
Sbjct: 241 DQIRQSAGHGGRLQGPSEFCTPSRIRGEGVEDGVVLGSHSSSPNYHR 271

[Close]
BLAST of Lsi11G016840 vs. ExPASy TrEMBL
Match: A0A1Q3C6T3 (TCP domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_19463 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 8.4e-56
Identity = 161/353 (45.61%), Postives = 189/353 (53.54%), Query Frame = 0 

Query: 4   SAGGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRP 63
           S GGEIV VQGGHI+ STG+KDRHSKV TAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRP
Sbjct: 10  STGGEIVQVQGGHIIRSTGRKDRHSKVSTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRP 69

Query: 64  SKAVDWLIMKAKFAIDKLQELPPYFSIANGF-----IDPNPKTG--------ETESSEFG 123
           SKAVDWLI KAK AIDKL +LPP+  IA+G       +PN   G        ++ESS + 
Sbjct: 70  SKAVDWLIEKAKSAIDKLADLPPWHPIASGSGVPIEAEPNTAAGSSEMAIGEQSESSGYN 129

Query: 124 SQLQLQ-----STAGNFVPP----------LESLFPISSTTTSTNFEGYPMNLILRPIDL 183
            QL  Q     S   +F+PP          ++S FP SST +S NF+ YP ++I R    
Sbjct: 130 FQLHRQLGDDPSNDSSFIPPSLDTDPIADTMKSFFPTSSTASSINFQNYPPDMISRSTIP 189

Query: 184 ARDLALSLHNLHDSRLI--PSEEDGSHSPANDQRLISDSILAGYEG-------------- 243
            +DL LSLH   D  LI   ++ D SH+ + DQ L   S   GYE               
Sbjct: 190 TQDLGLSLHPFQDPGLIHGQAQGDSSHTNSTDQNLFVGSAPVGYEANFQRMVAWSNGTST 249

Query: 244 ENAG--------------LWLQQPLLRQNSATAFSQRMSLQANLGHSSLSIRGW------ 285
           EN G              L  QQ LL Q S  AFSQR  LQ++      SIR W      
Sbjct: 250 ENRGGGGSVGGFIFNSLALPHQQALLGQGS--AFSQRGPLQSSFAQ---SIRSWDDISIA 309

[Close]
BLAST of Lsi11G016840 vs. ExPASy TrEMBL
Match: A0A2C9UT11 (TCP domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_13G138300 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.4e-55
Identity = 155/342 (45.32%), Postives = 190/342 (55.56%), Query Frame = 0 

Query: 5   AGGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPS 64
           AGGEIV VQGGHI+ STG+KDRHSKV+T+KGPRDRRVRLSAHTAIQFYDVQDRLGYDRPS
Sbjct: 4   AGGEIVQVQGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPS 63

Query: 65  KAVDWLIMKAKFAIDKLQELPPYF---SIANGFIDPNPKTG--------ETESSEFGSQL 124
           KAVDWLI KAK AIDKL ELPP+    + ANG ++ +   G        ++ESS +  QL
Sbjct: 64  KAVDWLIKKAKSAIDKLAELPPWHPTANDANGMMETDHNAGSSEMAIAEQSESSGYSFQL 123

Query: 125 QLQ-----STAGNFVPP------LESLFPISSTTTSTNFEGYPMNLILRPIDLARDLALS 184
             Q     S   +F+ P      ++SLFP SSTT++ NF+GYP  +I R  + + DL LS
Sbjct: 124 HRQLADNPSNDSSFITPPIDPDTMKSLFPTSSTTSTMNFQGYPPEIISRTTNHSEDLGLS 183

Query: 185 LHNLHDSRLI--PSEEDGSHSPANDQRLISDSILAGYE---------GENAG-------- 244
           LH   D  LI   S+ D SH+P+NDQ L   S   GYE           N G        
Sbjct: 184 LHPFQDQDLIHGQSQADTSHTPSNDQNLFGGSAPVGYEANFQRMMAWSNNTGTENRTDGG 243

Query: 245 -------LWLQQPLLRQNSATAFSQRMSLQANLGHSSLSIRGW------------SSQNR 285
                  +  QQ LL Q S  AFSQR  LQ++      +IR W            + +  
Sbjct: 244 FGFNPPQMPPQQTLLEQES--AFSQRGPLQSSFAQ---TIRAWNDLTMASANHHRAQEIH 303

[Close]
BLAST of Lsi11G016840 vs. ExPASy TrEMBL
Match: A0A6A6K413 (TCP domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_011489 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 4.2e-55
Identity = 154/346 (44.51%), Postives = 189/346 (54.62%), Query Frame = 0 

Query: 5   AGGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPS 64
           AGGEIV VQGGHI+ STG+KDRHSKV+TAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPS
Sbjct: 4   AGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPS 63

Query: 65  KAVDWLIMKAKFAIDKLQELPPYFSIA---NGFIDPNPKTG--------ETESSEFGSQL 124
           KAVDWLI KAK AIDKL ELPP+  +A   NG ++ +   G        ++ESS +  QL
Sbjct: 64  KAVDWLIKKAKSAIDKLAELPPWHPLANNTNGTMEADQNAGSSEMAIAEQSESSGYSFQL 123

Query: 125 QLQ-----STAGNFVPP----------LESLFPISSTTTSTNFEGYPMNLILRPIDLARD 184
                   S   +F+ P          ++SLFP SSTT+S NF+GYP ++I R  +   D
Sbjct: 124 HRHLADNPSNGSSFITPSIDPDAIPDTMKSLFPTSSTTSSMNFQGYPPDIISRTTNHTED 183

Query: 185 LALSLHNLHDSRLI--PSEEDGSHSPANDQRLISDSILAGYEGE---------------- 244
           L LSLH   D  LI   S+ D SH+P+NDQ L + S   GYE                  
Sbjct: 184 LGLSLHCFQDQGLIRGQSQADTSHAPSNDQNLFAGSAPVGYEANFQRMVAWSNNTSTENR 243

Query: 245 -NAGLWLQQP-------LLRQNSATAFSQRMSLQANLGHSSLSIRGW------------S 285
            + G     P       LL Q+   AFSQR  LQ++      SIR W            +
Sbjct: 244 TDGGFAFNSPQMPPPQTLLGQDQ--AFSQRGPLQSSFAQ---SIRAWNDLTMASADHHRT 303

[Close]
BLAST of Lsi11G016840 vs. NCBI nr
Match: KAG6589264.1 (Transcription factor TCP10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022963.1 Transcription factor TCP10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.9 bits (969), Expect = 7.9e-101
Identity = 198/287 (68.99%), Postives = 219/287 (76.31%), Query Frame = 0 

Query: 1   MKTSAGGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGY 60
           MK+SA  EIVPVQGGHI+ ST +KDRHSKVFTAKGPRDRRVRLSAHTAI+FYDVQD+LGY
Sbjct: 1   MKSSAAAEIVPVQGGHIIRSTARKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDQLGY 60

Query: 61  DRPSKAVDWLIMKAKFAIDKLQELPPYFSIANGFIDPNPKTGETESSEFGSQLQLQSTAG 120
           DRPSKAVDWLI KAKFAIDKL+ELPPY  IANGF DPN KTGETE+   G    LQS  G
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLRELPPYSPIANGFADPNRKTGETETESSG----LQSAVG 120

Query: 121 NFVPPLESLFPISSTTTSTNFEGYPMNLILRPIDLARDLALSLHNLHDSRLIPSEEDGSH 180
           +F P LE  FP +S TTS NF+GYP++LIL P D  RDLALSLHN HDSRLIPSE++ + 
Sbjct: 121 HFAPSLEPFFPTTSATTSINFQGYPVDLILTPTDPPRDLALSLHNFHDSRLIPSEQNANS 180

Query: 181 SPANDQRLISDSILAGYEGENAGLWLQQPLLRQNSATAFSQRMSLQANLGHSSLSIRGWS 240
           SP N QRLI DSI AGYEG +AGLWLQQPL+ QNS  AFSQ            + + GWS
Sbjct: 181 SPGNYQRLIGDSIPAGYEGGDAGLWLQQPLMGQNSTAAFSQ------------VPMHGWS 240

Query: 241 SQNRQSSVLDGRNDGSSELRTPSRIRGEGGEDNVVSGTHSSPPNYCR 288
            Q RQS+   GR  G SE  TPSRIRGEG ED VVSG+HSS PNY R
Sbjct: 241 DQIRQSAGHGGRLQGPSEFCTPSRIRGEGVEDGVVSGSHSSSPNYHR 271

[Close]
BLAST of Lsi11G016840 vs. NCBI nr
Match: XP_022989259.1 (transcription factor TCP10-like [Cucurbita maxima])

HSP 1 Score: 375.9 bits (964), Expect = 3.0e-100
Identity = 196/287 (68.29%), Postives = 220/287 (76.66%), Query Frame = 0 

Query: 1   MKTSAGGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGY 60
           MKTSA  EIVPVQGGHI+ ST +KDRHSKVFTAKGPRDRRVRLSAHTAI+FYDVQD+LGY
Sbjct: 1   MKTSAAAEIVPVQGGHIIRSTARKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDQLGY 60

Query: 61  DRPSKAVDWLIMKAKFAIDKLQELPPYFSIANGFIDPNPKTGETESSEFGSQLQLQSTAG 120
           DRPSKAVDWLI KAKFAIDKL+ELPPY  IA+GF DPN KTGE E+       +LQS  G
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLRELPPYSPIAHGFADPNRKTGERET----ESTELQSAVG 120

Query: 121 NFVPPLESLFPISSTTTSTNFEGYPMNLILRPIDLARDLALSLHNLHDSRLIPSEEDGSH 180
           +F P LE  FP +S TTS NF+GYP++LIL P D  RDLALSLHN HDSRLIPSE++ + 
Sbjct: 121 HFAPSLEPFFPTTSATTSINFQGYPVDLILTPTDPPRDLALSLHNFHDSRLIPSEQNANS 180

Query: 181 SPANDQRLISDSILAGYEGENAGLWLQQPLLRQNSATAFSQRMSLQANLGHSSLSIRGWS 240
           SP N QRLI DSI AGYEG +AGLWLQQPL+ QNS  AFSQ            + + GWS
Sbjct: 181 SPGNYQRLIGDSIPAGYEGGDAGLWLQQPLMEQNSTAAFSQ------------VPMHGWS 240

Query: 241 SQNRQSSVLDGRNDGSSELRTPSRIRGEGGEDNVVSGTHSSPPNYCR 288
           +Q RQS+   GR +G SE  TPSRIRGEG ED VVSG+HSS PNY R
Sbjct: 241 NQIRQSAGHGGRFEGPSEFCTPSRIRGEGVEDGVVSGSHSSSPNYHR 271

[Close]
BLAST of Lsi11G016840 vs. NCBI nr
Match: XP_023529225.1 (transcription factor TCP10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.8 bits (961), Expect = 6.7e-100
Identity = 196/287 (68.29%), Postives = 220/287 (76.66%), Query Frame = 0 

Query: 1   MKTSAGGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGY 60
           MK+SA  EIVPVQGGHI+ ST +KDRHSKVFTAKGPRDRRVRLSAHTAI+FYDVQD+LGY
Sbjct: 1   MKSSAAAEIVPVQGGHIIRSTARKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDQLGY 60

Query: 61  DRPSKAVDWLIMKAKFAIDKLQELPPYFSIANGFIDPNPKTGETESSEFGSQLQLQSTAG 120
           DRPSKAVDWLI KAKFAIDKL+ELPPY  IANGF DPN KTGETE+       +LQS  G
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLRELPPYSPIANGFADPNRKTGETET----ESSELQSAVG 120

Query: 121 NFVPPLESLFPISSTTTSTNFEGYPMNLILRPIDLARDLALSLHNLHDSRLIPSEEDGSH 180
           +F P LE  FP +S TTS NF+GYP++LIL P    RDLALSLHN HDSRLIPSE++ + 
Sbjct: 121 HFAPSLEPFFPTTSATTSINFQGYPVDLILTPTGPPRDLALSLHNFHDSRLIPSEQNANS 180

Query: 181 SPANDQRLISDSILAGYEGENAGLWLQQPLLRQNSATAFSQRMSLQANLGHSSLSIRGWS 240
           SP N QRLI DSI AGYEG +AGLWLQQPL+ QNS  AFSQ            + + GWS
Sbjct: 181 SPGNYQRLIGDSIPAGYEGGDAGLWLQQPLMGQNSTAAFSQ------------VPMHGWS 240

Query: 241 SQNRQSSVLDGRNDGSSELRTPSRIRGEGGEDNVVSGTHSSPPNYCR 288
           +Q RQS+   GR +G SE  TPSRIRGEG ED VVSG+HSS PNY R
Sbjct: 241 NQIRQSAGHGGRFEGPSEFCTPSRIRGEGVEDGVVSGSHSSSPNYHR 271

[Close]
BLAST of Lsi11G016840 vs. NCBI nr
Match: XP_022930891.1 (transcription factor TCP10-like [Cucurbita moschata])

HSP 1 Score: 372.1 bits (954), Expect = 4.4e-99
Identity = 194/287 (67.60%), Postives = 218/287 (75.96%), Query Frame = 0 

Query: 1   MKTSAGGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGY 60
           MK+SA  EIVPVQGGHI+ ST +KDRHSKVFT+KGPRDRRVRLSAHTAI+FYDVQD+LGY
Sbjct: 1   MKSSAAAEIVPVQGGHIIRSTARKDRHSKVFTSKGPRDRRVRLSAHTAIRFYDVQDQLGY 60

Query: 61  DRPSKAVDWLIMKAKFAIDKLQELPPYFSIANGFIDPNPKTGETESSEFGSQLQLQSTAG 120
           DRPSKAVDWLI KAKFAIDKL+ELPPY  IANGF DPN KTGETE+       +LQS  G
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLRELPPYSPIANGFADPNQKTGETET----ESSELQSAVG 120

Query: 121 NFVPPLESLFPISSTTTSTNFEGYPMNLILRPIDLARDLALSLHNLHDSRLIPSEEDGSH 180
           +F P LE  FP +S TTS NF+GYP++LIL P D  RDLALSLHN H+SRLIPSE++ + 
Sbjct: 121 HFAPSLEPFFPTTSATTSINFQGYPVDLILTPTDPPRDLALSLHNFHESRLIPSEQNANS 180

Query: 181 SPANDQRLISDSILAGYEGENAGLWLQQPLLRQNSATAFSQRMSLQANLGHSSLSIRGWS 240
           SP N QRLI DSI AGYEG +AGLWLQQPL+ QNS  AFSQ            + + GWS
Sbjct: 181 SPGNYQRLIGDSIPAGYEGGDAGLWLQQPLMGQNSTAAFSQ------------VQMHGWS 240

Query: 241 SQNRQSSVLDGRNDGSSELRTPSRIRGEGGEDNVVSGTHSSPPNYCR 288
            Q RQS+   GR  G SE  TPSRIRGEG ED VV G+HSS PNY R
Sbjct: 241 DQIRQSAGHGGRLQGPSEFCTPSRIRGEGVEDGVVLGSHSSSPNYHR 271

[Close]
BLAST of Lsi11G016840 vs. NCBI nr
Match: XP_038877605.1 (transcription factor TCP10-like [Benincasa hispida])

HSP 1 Score: 330.5 bits (846), Expect = 1.5e-86
Identity = 162/195 (83.08%), Postives = 172/195 (88.21%), Query Frame = 0 

Query: 1   MKTSAGGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGY 60
           MKTS GGEIVPVQGGHIL STG+KDRHSKVFTAKGPRDRRVRLSAHTAI+FYDVQDRLGY
Sbjct: 1   MKTSTGGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGY 60

Query: 61  DRPSKAVDWLIMKAKFAIDKLQELPPYFSIANGFIDPNPKTGETESSEFGSQLQLQSTAG 120
           DRPSKAVDWLI KAKFAIDKL+ELPPYF I +G  D NPKTGET+S EFG QLQLQS  G
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLKELPPYFPIVSGLTDSNPKTGETDSPEFGFQLQLQSATG 120

Query: 121 NFVPPLESLFPISSTTTSTNFEGYPMNLILRPIDLARDLALSLHNLHDSRLIPSEEDGSH 180
           NF PP ESLFP+SS T STNF+GYP+NLI RP D  RDLALSLHN HDSR+IPSEEDGSH
Sbjct: 121 NFAPPPESLFPMSSATVSTNFQGYPVNLISRPTDPVRDLALSLHNFHDSRVIPSEEDGSH 180

Query: 181 SPANDQRLISDSILA 196
           S ANDQRLI+DSI A
Sbjct: 181 STANDQRLIADSIPA 195

[Close]
BLAST of Lsi11G016840 vs. TAIR 10
Match: AT2G31070.1 (TCP domain protein 10 )

HSP 1 Score: 159.1 bits (401), Expect = 5.4e-39
Identity = 97/175 (55.43%), Postives = 116/175 (66.29%), Query Frame = 0 

Query: 6   GGEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSK 65
           GGEIV VQGGHI+ +TG+KDRHSKVFT+KGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSK
Sbjct: 12  GGEIVEVQGGHIIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSK 71

Query: 66  AVDWLIMKAKFAIDKLQELPPYFSIANGFIDPNPK-TGETESSEFGSQLQLQSTAGNFVP 125
           AVDWLI KAK AIDKL EL    +        N K    T   +  +  Q Q  A N  P
Sbjct: 72  AVDWLIKKAKTAIDKL-ELGETTTTTTRQEPVNTKPESPTLVFQRENNDQTQFVAANLDP 131

Query: 126 --PLESLFPISSTT-----TSTNFEGYP----MNLILR----PIDLARDLALSLH 165
              +++ FP ++TT     T+ NF+ YP     N++ R    P +L++DL LSLH
Sbjct: 132 EDAMKTFFPATTTTNGGGGTNINFQNYPHQDDNNMVSRTTTPPPNLSQDLGLSLH 185

[Close]
BLAST of Lsi11G016840 vs. TAIR 10
Match: AT3G15030.1 (TCP family transcription factor 4 )

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-36
Identity = 98/207 (47.34%), Postives = 119/207 (57.49%), Query Frame = 0 

Query: 7   GEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 66
           GEIV VQGGHI+ STG+KDRHSKV TAKGPRDRRVRLSAHTAIQFYDVQDRLG+DRPSKA
Sbjct: 29  GEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKA 88

Query: 67  VDWLIMKAKFAIDKLQELPPY-----FSIANGFIDPNPKTGETESS-------EFGSQLQ 126
           VDWLI KAK +ID+L ELPP+       +A     P   T +T+ S       +   Q Q
Sbjct: 89  VDWLIKKAKTSIDELAELPPWNPADAIRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQ 148

Query: 127 LQSTAG--------------NFVPP----------LESLFPI--SSTTTSTN-------F 169
           LQ   G              +F+PP          ++S FP+  SST   +N        
Sbjct: 149 LQFGVGFNGGGAEHPSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYH 208

[Close]
BLAST of Lsi11G016840 vs. TAIR 10
Match: AT3G15030.2 (TCP family transcription factor 4 )

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-36
Identity = 98/207 (47.34%), Postives = 119/207 (57.49%), Query Frame = 0 

Query: 7   GEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 66
           GEIV VQGGHI+ STG+KDRHSKV TAKGPRDRRVRLSAHTAIQFYDVQDRLG+DRPSKA
Sbjct: 29  GEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKA 88

Query: 67  VDWLIMKAKFAIDKLQELPPY-----FSIANGFIDPNPKTGETESS-------EFGSQLQ 126
           VDWLI KAK +ID+L ELPP+       +A     P   T +T+ S       +   Q Q
Sbjct: 89  VDWLIKKAKTSIDELAELPPWNPADAIRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQ 148

Query: 127 LQSTAG--------------NFVPP----------LESLFPI--SSTTTSTN-------F 169
           LQ   G              +F+PP          ++S FP+  SST   +N        
Sbjct: 149 LQFGVGFNGGGAEHPSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYH 208

[Close]
BLAST of Lsi11G016840 vs. TAIR 10
Match: AT3G15030.3 (TCP family transcription factor 4 )

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-36
Identity = 98/207 (47.34%), Postives = 119/207 (57.49%), Query Frame = 0 

Query: 7   GEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 66
           GEIV VQGGHI+ STG+KDRHSKV TAKGPRDRRVRLSAHTAIQFYDVQDRLG+DRPSKA
Sbjct: 29  GEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKA 88

Query: 67  VDWLIMKAKFAIDKLQELPPY-----FSIANGFIDPNPKTGETESS-------EFGSQLQ 126
           VDWLI KAK +ID+L ELPP+       +A     P   T +T+ S       +   Q Q
Sbjct: 89  VDWLIKKAKTSIDELAELPPWNPADAIRLAAANAKPRRTTAKTQISPSPPPPQQQQQQQQ 148

Query: 127 LQSTAG--------------NFVPP----------LESLFPI--SSTTTSTN-------F 169
           LQ   G              +F+PP          ++S FP+  SST   +N        
Sbjct: 149 LQFGVGFNGGGAEHPSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYH 208

[Close]
BLAST of Lsi11G016840 vs. TAIR 10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 )

HSP 1 Score: 149.1 bits (375), Expect = 5.6e-36
Identity = 98/218 (44.95%), Postives = 125/218 (57.34%), Query Frame = 0 

Query: 7   GEIVPVQGGHILCSTGKKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 66
           GEIV VQGGHI+ STG+KDRHSKV TAKGPRDRRVRLSA TAIQFYDVQDRLG+DRPSKA
Sbjct: 33  GEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKA 92

Query: 67  VDWLIMKAKFAIDKLQELPPY----------FSIANG--------FIDPNPKTGETESSE 126
           VDWLI KAK AID L +LPP+           + AN            P P+  ETE   
Sbjct: 93  VDWLITKAKSAIDDLAQLPPWNPADTLRQHAAAAANAKPRKTKTLISPPPPQPEETEHHR 152

Query: 127 FGSQLQLQST-------AGNFVPPLESLFPISSTTTSTNFEGYPMNLILRPIDLARDLAL 186
            G +   +S+       + +    ++S FP++ST  S + +  P     +  DL R   L
Sbjct: 153 IGEEEDNESSFLPASMDSDSIADTIKSFFPVASTQQSYHHQP-PSRGNTQNQDLLR---L 212

Query: 187 SLHNLHDSRLIPSE-EDGSHSPANDQRLISDSILAGYE 199
           SL +  +    P++ E    S  ++ +L  DS  A +E
Sbjct: 213 SLQSFQNGPPFPNQTEPALFSGQSNNQLAFDSSTASWE 246

The following BLAST results are available for this feature:
BLAST of Lsi11G016840 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O822777.6e-3855.43Transcription factor TCP10 OS=Arabidopsis thaliana OX=3702 GN=TCP10 PE=1 SV=1[more]
Q8LPR51.6e-3547.34Transcription factor TCP4 OS=Arabidopsis thaliana OX=3702 GN=TCP4 PE=1 SV=1[more]
A2WM142.1e-3546.83Transcription factor PCF5 OS=Oryza sativa subsp. indica OX=39946 GN=PCF5 PE=4 SV... [more]
Q8LT072.1e-3546.83Transcription factor PCF5 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF5 PE=2 ... [more]
Q9MAH87.9e-3544.95Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1[more]
BLAST of Lsi11G016840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JNV11.5e-10068.29transcription factor TCP10-like OS=Cucurbita maxima OX=3661 GN=LOC111486387 PE=4... [more]
A0A6J1ES582.1e-9967.60transcription factor TCP10-like OS=Cucurbita moschata OX=3662 GN=LOC111437241 PE... [more]
A0A1Q3C6T38.4e-5645.61TCP domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_1946... [more]
A0A2C9UT112.4e-5545.32TCP domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_13G138300 PE... [more]
A0A6A6K4134.2e-5544.51TCP domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_011489 PE=4... [more]
BLAST of Lsi11G016840 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589264.17.9e-10168.99Transcription factor TCP10, partial [Cucurbita argyrosperma subsp. sororia] >KAG... [more]
XP_022989259.13.0e-10068.29transcription factor TCP10-like [Cucurbita maxima][more]
XP_023529225.16.7e-10068.29transcription factor TCP10-like [Cucurbita pepo subsp. pepo][more]
XP_022930891.14.4e-9967.60transcription factor TCP10-like [Cucurbita moschata][more]
XP_038877605.11.5e-8683.08transcription factor TCP10-like [Benincasa hispida][more]
BLAST of Lsi11G016840 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G31070.15.4e-3955.43TCP domain protein 10 [more]
AT3G15030.11.1e-3647.34TCP family transcription factor 4 [more]
AT3G15030.21.1e-3647.34TCP family transcription factor 4 [more]
AT3G15030.31.1e-3647.34TCP family transcription factor 4 [more]
AT1G53230.15.6e-3644.95TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017887Transcription factor TCP subgroupPFAMPF03634TCPcoord: 21..104
e-value: 3.3E-30
score: 105.7
IPR017887Transcription factor TCP subgroupPROSITEPS51369TCPcoord: 23..81
score: 31.375992
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..287
NoneNo IPR availablePANTHERPTHR31072:SF136TRANSCRIPTION FACTOR TCP10coord: 6..273
IPR005333Transcription factor, TCPPANTHERPTHR31072TRANSCRIPTION FACTOR TCP4-RELATEDcoord: 6..273

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G016840.1Lsi11G016840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003700 DNA-binding transcription factor activity