Lsi11G015390 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G015390
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Epidermal patterning factor-like protein
Location	chr11: 23719840 .. 23720687 (-)
RNA-Seq Expression	Lsi11G015390
Synteny	Lsi11G015390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAATTCCCTCTCTGTTTCTCTAAAAAATAACCTCTTAATTTCTTCAACTCCTACTCTAAAATAATGAAGCCTTCCACTTGCTTTTCTATTCTCTTCATTGCTTTCTTATTATTCCCAACACCCATTTCTTCTAGACGCATTTCTCAACAAAACTCACGTAAATCACTCGCACCCTTTTCTCGTTAAGTGGTTAAAATTACTTTTCGTTACGTTTCATAATCATTCTCTAAAACCTGTCTTCAATCATGATATATTTCTATGTGTAGGTCATGGCCACCACCGCAAGACAGTGGCAGCAGCCAAAACGACAATGGCAGTGAAAGAGAAGTTGTACTGGCTGGAAAAGAAGGCGGCAATGGGAAGAAAAGGGGCAGAGACGGTTGAAGTAGCGGGGTCGAGCTTGCCGGACTGTTCACATGCGTGTGGCTCGTGTTCGCCGTGCAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCATATCCTGTTCCTTAATCCAAACCCTTTCTTTGCTCTCAATCCTTAGCAAGATTGACCAATTTCACACAGTTGTATGTAGAAGGAAAACAAAAAAAAGAAAAAAGCTAAAAACAATAGTTTCATTGTATATCGAATGGTTGAGAGGTTACTAACTATAATGTGACGGTCACATTTTATGTACAAATATATCGATCAATTGTAGCACTAGTAACCCATCCTCTTGTTTCCGTTTATTATTCTTATAGTTTTTTCTTTCTTGCTTTTTTTTTGTGCGAGTTAGAGTTGTAATCAGAGAGCTCTTTAATAACATTTTG

mRNA sequence

CACAATTCCCTCTCTGTTTCTCTAAAAAATAACCTCTTAATTTCTTCAACTCCTACTCTAAAATAATGAAGCCTTCCACTTGCTTTTCTATTCTCTTCATTGCTTTCTTATTATTCCCAACACCCATTTCTTCTAGACGCATTTCTCAACAAAACTCACGTCATGGCCACCACCGCAAGACAGTGGCAGCAGCCAAAACGACAATGGCAGTGAAAGAGAAGTTGTACTGGCTGGAAAAGAAGGCGGCAATGGGAAGAAAAGGGGCAGAGACGGTTGAAGTAGCGGGGTCGAGCTTGCCGGACTGTTCACATGCGTGTGGCTCGTGTTCGCCGTGCAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCATATCCTGTTCCTTAATCCAAACCCTTTCTTTGCTCTCAATCCTTAGCAAGATTGACCAATTTCACACAGTTGTATGTAGAAGGAAAACAAAAAAAAGAAAAAAGCTAAAAACAATAGTTTCATTGTATATCGAATGGTTGAGAGGTTACTAACTATAATGTGACGGTCACATTTTATGTACAAATATATCGATCAATTGTAGCACTAGTAACCCATCCTCTTGTTTCCGTTTATTATTCTTATAGTTTTTTCTTTCTTGCTTTTTTTTTGTGCGAGTTAGAGTTGTAATCAGAGAGCTCTTTAATAACATTTTG

Coding sequence (CDS)

ATGAAGCCTTCCACTTGCTTTTCTATTCTCTTCATTGCTTTCTTATTATTCCCAACACCCATTTCTTCTAGACGCATTTCTCAACAAAACTCACGTCATGGCCACCACCGCAAGACAGTGGCAGCAGCCAAAACGACAATGGCAGTGAAAGAGAAGTTGTACTGGCTGGAAAAGAAGGCGGCAATGGGAAGAAAAGGGGCAGAGACGGTTGAAGTAGCGGGGTCGAGCTTGCCGGACTGTTCACATGCGTGTGGCTCGTGTTCGCCGTGCAGATTAGTGATGATAAGCTTTGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCATATCCTGTTCCTTAA

Protein sequence

MKPSTCFSILFIAFLLFPTPISSRRISQQNSRHGHHRKTVAAAKTTMAVKEKLYWLEKKAAMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

Homology

[Close]

BLAST of Lsi11G015390 vs. ExPASy Swiss-Prot
Match: Q8S8I4 (Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.4e-26
Identity = 51/61 (83.61%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 64  RKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPV 123
           R+  +TV+VAGS LPDCSHACGSCSPCRLVM+SFVCAS++EAETCPMAY+CMCNNKSYPV
Sbjct: 44  RRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPV 103

Query: 124 P 125
           P
Sbjct: 104 P 104

[Close]

BLAST of Lsi11G015390 vs. ExPASy Swiss-Prot
Match: Q8LC53 (Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.4e-11
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 59  KAAMGRKGAETVEV--AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMC 118
           K  + + G   +E+   GSSLPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C
Sbjct: 53  KKEISKNGGVEMEMYPTGSSLPDCSYACGACSPCKRVMISFECS---VAESCSVIYRCTC 112

Query: 119 NNKSYPVP 125
             + Y VP
Sbjct: 113 RGRYYHVP 117

[Close]

BLAST of Lsi11G015390 vs. ExPASy Swiss-Prot
Match: C4B8C5 (EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EPFL7 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.5e-11
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 71  EVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 125
           + +GSS+PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Sbjct: 119 KASGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

[Close]

BLAST of Lsi11G015390 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.4e-04
Identity = 40/128 (31.25%), Postives = 58/128 (45.31%), Query Frame = 0


Query: 7   FSILFIAFLLFP---------TPISSRRISQQNSRHGHHRKTVA--AAKTTMAVKE--KL 66
           FS+ ++  L F          TP S+     +NS  G      A    K+T+ +K+  K+
Sbjct: 31  FSLFYLLLLFFVLCVIATFTITPTSTSSPYNRNSNSGTLGNFYAKEEGKSTVVIKKTRKI 90

Query: 67  YWLEKKAAMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYR 122
               K+A + R     +   GSS P CS  CG C+PC+ V +     +   AE  P A+R
Sbjct: 91  GDRSKEAELRR----ILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWR 150

[Close]

BLAST of Lsi11G015390 vs. ExPASy TrEMBL
Match: A0A0A0K5P8 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047370 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 9.6e-49
Identity = 103/127 (81.10%), Postives = 108/127 (85.04%), Query Frame = 0


Query: 1   MKPSTCFSILFIAFLLFPTPISSRRISQQNSRHGHHRKTVAAAK---TTMAVKEKLYWLE 60
           MKP TCFSILFIAFLLF TPISSRRISQQNSRHGHHRK  A++      + VKEK   + 
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60

Query: 61  KKAAMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCN 120
           +   MGRKG ETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCN
Sbjct: 61  R---MGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCN 120

Query: 121 NKSYPVP 125
           NKSYPVP
Sbjct: 121 NKSYPVP 124

[Close]

BLAST of Lsi11G015390 vs. ExPASy TrEMBL
Match: A0A1S3C0N9 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.5e-46
Identity = 99/126 (78.57%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 1   MKPSTCFSILFIAFLLFPTPISSRRISQQNSRHGHHRKTVAAA--KTTMAVKEKLYWLEK 60
           MKP TCFSI+FI FLL  TPISSRRISQQNSRHGHHRK  A++     + V EK+  +  
Sbjct: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMM-- 60

Query: 61  KAAMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNN 120
              MGRKG ETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNN
Sbjct: 61  --TMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNN 120

Query: 121 KSYPVP 125
           KSYPVP
Sbjct: 121 KSYPVP 122

[Close]

BLAST of Lsi11G015390 vs. ExPASy TrEMBL
Match: A0A6J1ESJ9 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111437184 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.1e-44
Identity = 97/129 (75.19%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 1   MKPSTCFSILFIAFLLFPTPISSRRISQQNSRHGHHRK-TVAAAKTTMAVKEKLYWLEKK 60
           MK   CFS++FIAFLLFP PISSRRISQ NSR GHH K  V + +   A K K YW   K
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKGKSYWPVTK 60

Query: 61  ----AAMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCM 120
               A MGRKG ETVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCM
Sbjct: 61  AVAAAVMGRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCM 120

Query: 121 CNNKSYPVP 125
           CNNKSYPVP
Sbjct: 121 CNNKSYPVP 129

[Close]

BLAST of Lsi11G015390 vs. ExPASy TrEMBL
Match: A0A6J1JEL1 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486204 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.1e-43
Identity = 93/125 (74.40%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 1   MKPSTCFSILFIAFLLFPTPISSRRISQQNSRHGHHRK-TVAAAKTTMAVKEKLYWLEKK 60
           MK   CFS++FIAFLLFP PISSRRISQ NSR GHH K  V + +   A K+  YW    
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKQNSYW---- 60

Query: 61  AAMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNK 120
            A+ RKG ETVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCMCNNK
Sbjct: 61  PALWRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCMCNNK 120

Query: 121 SYPVP 125
           SYPVP
Sbjct: 121 SYPVP 121

[Close]

BLAST of Lsi11G015390 vs. ExPASy TrEMBL
Match: A0A6J1GMI9 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111455631 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.6e-38
Identity = 88/124 (70.97%), Postives = 93/124 (75.00%), Query Frame = 0


Query: 1   MKPSTCFSILFIAFLLFPTPISSRRISQQNSRHGHHRKTVAAAKTTMAVKEKLYWLEKKA 60
           MK ST FSI+FIAFLLFPTPISS+RIS QNS                          ++A
Sbjct: 1   MKGSTWFSIIFIAFLLFPTPISSQRISHQNS--------------------------QEA 60

Query: 61  AMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
           AMGRKG ETVEVAGSSLPDCSHAC SCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  AMGRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 98

Query: 121 YPVP 125
           YP+P
Sbjct: 121 YPLP 98

[Close]

BLAST of Lsi11G015390 vs. NCBI nr
Match: XP_038888568.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida])

HSP 1 Score: 206.8 bits (525), Expect = 1.0e-49
Identity = 103/124 (83.06%), Postives = 107/124 (86.29%), Query Frame = 0


Query: 1   MKPSTCFSILFIAFLLFPTPISSRRISQQNSRHGHHRKTVAAAKTTMAVKEKLYWLEKKA 60
           M PST FSILFIAF LFPTPISSR ISQ+NS HGHHRK       T  VKEKLY  EKKA
Sbjct: 1   MNPSTWFSILFIAFFLFPTPISSRHISQRNSHHGHHRK-----MATTTVKEKLYSPEKKA 60

Query: 61  AMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
            +GRKGA+TVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  VIGRKGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 119

Query: 121 YPVP 125
           YP+P
Sbjct: 121 YPIP 119

[Close]

BLAST of Lsi11G015390 vs. NCBI nr
Match: XP_004136818.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical protein Csa_020445 [Cucumis sativus])

HSP 1 Score: 202.6 bits (514), Expect = 2.0e-48
Identity = 103/127 (81.10%), Postives = 108/127 (85.04%), Query Frame = 0


Query: 1   MKPSTCFSILFIAFLLFPTPISSRRISQQNSRHGHHRKTVAAAK---TTMAVKEKLYWLE 60
           MKP TCFSILFIAFLLF TPISSRRISQQNSRHGHHRK  A++      + VKEK   + 
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60

Query: 61  KKAAMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCN 120
           +   MGRKG ETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCN
Sbjct: 61  R---MGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCN 120

Query: 121 NKSYPVP 125
           NKSYPVP
Sbjct: 121 NKSYPVP 124

[Close]

BLAST of Lsi11G015390 vs. NCBI nr
Match: XP_008455333.1 (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo])

HSP 1 Score: 195.3 bits (495), Expect = 3.2e-46
Identity = 99/126 (78.57%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 1   MKPSTCFSILFIAFLLFPTPISSRRISQQNSRHGHHRKTVAAA--KTTMAVKEKLYWLEK 60
           MKP TCFSI+FI FLL  TPISSRRISQQNSRHGHHRK  A++     + V EK+  +  
Sbjct: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMM-- 60

Query: 61  KAAMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNN 120
              MGRKG ETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNN
Sbjct: 61  --TMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNN 120

Query: 121 KSYPVP 125
           KSYPVP
Sbjct: 121 KSYPVP 122

[Close]

BLAST of Lsi11G015390 vs. NCBI nr
Match: XP_022930814.1 (uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 uncharacterized protein LOC111793854 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.1 bits (479), Expect = 2.3e-44
Identity = 97/129 (75.19%), Postives = 102/129 (79.07%), Query Frame = 0


Query: 1   MKPSTCFSILFIAFLLFPTPISSRRISQQNSRHGHHRK-TVAAAKTTMAVKEKLYWLEKK 60
           MK   CFS++FIAFLLFP PISSRRISQ NSR GHH K  V + +   A K K YW   K
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKGKSYWPVTK 60

Query: 61  ----AAMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCM 120
               A MGRKG ETVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCM
Sbjct: 61  AVAAAVMGRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCM 120

Query: 121 CNNKSYPVP 125
           CNNKSYPVP
Sbjct: 121 CNNKSYPVP 129

[Close]

BLAST of Lsi11G015390 vs. NCBI nr
Match: KAG6572355.1 (Protein EPIDERMAL PATTERNING FACTOR 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.0 bits (471), Expect = 1.9e-43
Identity = 95/124 (76.61%), Postives = 100/124 (80.65%), Query Frame = 0


Query: 1   MKPSTCFSILFIAFLLFPTPISSRRISQQNSRHGHHRKTVAAAKTTMAVKEKLYWLEKKA 60
           MK ST FSI+FIAFLLFPTPISS+RIS QNSRH HHRK  A                ++A
Sbjct: 1   MKGSTWFSIIFIAFLLFPTPISSQRISHQNSRHVHHRKMAA----------------EEA 60

Query: 61  AMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
           AMGRKG ETVEVAGSSLPDCSHAC SCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  AMGRKGVETVEVAGSSLPDCSHACASCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 108

Query: 121 YPVP 125
           YP+P
Sbjct: 121 YPLP 108

[Close]

BLAST of Lsi11G015390 vs. TAIR 10
Match: AT2G20875.1 (epidermal patterning factor 1 )

HSP 1 Score: 118.2 bits (295), Expect = 4.6e-27
Identity = 51/61 (83.61%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 64  RKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPV 123
           R+  +TV+VAGS LPDCSHACGSCSPCRLVM+SFVCAS++EAETCPMAY+CMCNNKSYPV
Sbjct: 44  RRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPV 103

Query: 124 P 125
           P
Sbjct: 104 P 104

[Close]

BLAST of Lsi11G015390 vs. TAIR 10
Match: AT1G34245.1 (Putative membrane lipoprotein )

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 59  KAAMGRKGAETVEV--AGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMC 118
           K  + + G   +E+   GSSLPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C
Sbjct: 53  KKEISKNGGVEMEMYPTGSSLPDCSYACGACSPCKRVMISFECS---VAESCSVIYRCTC 112

Query: 119 NNKSYPVP 125
             + Y VP
Sbjct: 113 RGRYYHVP 117

[Close]

BLAST of Lsi11G015390 vs. TAIR 10
Match: AT1G71866.1 (LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Putative membrane lipoprotein (TAIR:AT1G34245.1). )

HSP 1 Score: 68.9 bits (167), Expect = 3.2e-12
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 71  EVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 125
           + +GSS+PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Sbjct: 119 KASGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

[Close]

BLAST of Lsi11G015390 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 46.6 bits (109), Expect = 1.7e-05
Identity = 40/128 (31.25%), Postives = 58/128 (45.31%), Query Frame = 0


Query: 7   FSILFIAFLLFP---------TPISSRRISQQNSRHGHHRKTVA--AAKTTMAVKE--KL 66
           FS+ ++  L F          TP S+     +NS  G      A    K+T+ +K+  K+
Sbjct: 31  FSLFYLLLLFFVLCVIATFTITPTSTSSPYNRNSNSGTLGNFYAKEEGKSTVVIKKTRKI 90

Query: 67  YWLEKKAAMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYR 122
               K+A + R     +   GSS P CS  CG C+PC+ V +     +   AE  P A+R
Sbjct: 91  GDRSKEAELRR----ILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWR 150

[Close]

BLAST of Lsi11G015390 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 45.8 bits (107), Expect = 2.9e-05
Identity = 30/84 (35.71%), Postives = 43/84 (51.19%), Query Frame = 0


Query: 40  VAAAKTTMAVKE--KLYWLEKKAAMGRKGAETVEVAGSSLPDCSHACGSCSPCRLVMISF 99
           V   K+T+ +K+  K+    K+A + R     +   GSS P CS  CG C+PC+ V +  
Sbjct: 149 VEEGKSTVVIKKTRKIGDRSKEAELRR----ILRGLGSSPPRCSSKCGRCTPCKPVHVPV 208

Query: 100 VCASLQEAETCPMAYRCMCNNKSY 122
              +   AE  P A+RC C NK Y
Sbjct: 209 PPGTPVTAEYYPEAWRCKCGNKLY 228

The following BLAST results are available for this feature:

BLAST of Lsi11G015390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8I4	6.4e-26	83.61	Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE...	[more]
Q8LC53	3.4e-11	50.00	Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE...	[more]
C4B8C5	4.5e-11	51.85	EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	2.4e-04	31.25	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of Lsi11G015390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5P8	9.6e-49	81.10	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047...	[more]
A0A1S3C0N9	1.5e-46	78.57	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522...	[more]
A0A6J1ESJ9	1.1e-44	75.19	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JEL1	2.1e-43	74.40	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1GMI9	2.6e-38	70.97	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Lsi11G015390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888568.1	1.0e-49	83.06	protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida]	[more]
XP_004136818.1	2.0e-48	81.10	protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical...	[more]
XP_008455333.1	3.2e-46	78.57	PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]	[more]
XP_022930814.1	2.3e-44	75.19	uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 unchar...	[more]
KAG6572355.1	1.9e-43	76.61	Protein EPIDERMAL PATTERNING FACTOR 1, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of Lsi11G015390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20875.1	4.6e-27	83.61	epidermal patterning factor 1	[more]
AT1G34245.1	2.4e-12	50.00	Putative membrane lipoprotein	[more]
AT1G71866.1	3.2e-12	51.85	LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Put...	[more]
AT2G30370.2	1.7e-05	31.25	allergen-related	[more]
AT2G30370.1	2.9e-05	35.71	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 73..122 e-value: 4.1E-15 score: 55.5
None	No IPR available	PANTHER	PTHR33109:SF41	PROTEIN EPIDERMAL PATTERNING FACTOR 1	coord: 5..124
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 5..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G015390.1	Lsi11G015390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region