Lsi11G015230 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G015230
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr11: 23638193 .. 23641728 (+)
RNA-Seq Expression	Lsi11G015230
Synteny	Lsi11G015230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTGTTGTTGCTTGAAGGGTTCATGCACTAAAAGAGTTTGCACTAAGAAGGTGAGATGGATAATTTTGTATCTTTTTTATATTTTAAATATATATATATTTATATCTTTTCCCAAATATATATATGAGAAATTTAAAAAAAAAAAAAAGTCAAACTATTTACATAATATAGCAAAAAAAAAACATTAATAAACATTGATAGACTTCTATCAGCATCTATAATTTCTATCGCTGATAGACCTCGATAGACTTTTATCAGGGTCTATCATAGCTATCTAAAAATTTTGCTATTTTGTATAAATAGTTTTCCTTATTTTTCTATTTTTAAAAATTTTCCTATATATATATATATATATAATGAGATGAAAAAATTTAGGGTTTGTGGCCAAATCTTTATTTTAAGTAATAAATTTATGCTTAATTTCAATTGGAATGACTTAGTAAACCTATTAGGCTAAATAGGGTGATTCTTCCCAAAATGGGTTCAACATTTGTTTTTCTTTTATTCCTTTCTTTGTTTTCTGTACTTTCTTATATAATACTAAAAAAAAATGTAAACTCTTTTGTTATATTAAAATAAATGATTAGAAAGGTAGCTTGGAATTGTAAATTTATTTTTGCATCTAAATATTGTTAATATATTTTTTTTTCTTAAAATAGGTTTAGAGTAGTTAATTAATGGTAAAATTTCATTTTAATTTTTGGACTTTCTATTTATCAACTATAATACTACAATTTTGCAAACAATGTACAATCTTATAAGGCATGTAATTGTGAATTACGTGTCCAATATCACTCCACAAAGTATAATACAAACAAATTCATGAAAAAAATTGTCTAAAATTGATGTCTTATCCTCTATCAAAAAATGAATGTGTTGCATGCAATTTTTTTTTTTTTTTTTAACATATACTTTTATAATAATCTTGAATATGAATTTAATTATTTTATATTAAAGCATGTTAATTTAAAATAATTATAATAATTAGTTTTCATTAATTTTTTATAACTATAAAATTAATTTTATAATTATTTTAAATTAATTAATAAAAGTAAACCTCAAAGACCAAAGTAAAAATTAACAAAAATTTAAAAGTAAAAGTGTAAAATATAAAAATCTCTAGATCAAATAAAAACTAAATTTCAAACTATTTTAAAATATAGAAAATTTTAACTTTCACCCTTTTAAATTTTTTACTATATTTGTAGTCTTAAAAAACTATTGTTGGTACTATTTAGAAGGGAGAGAAATCACGAATTTTGAAAATTTTAAATCCACGTGTTCTGAAATTAAAAAAAAAAAAGTAAGTTGCTAAATAGAAACTTTTTGAAATACCTAAACAAAAATTATAAATGATTCGAGAATTTTTTTTAAATAGAAAAATAAGAGAATCTATTTACATAAAATAATAAATTTTTTAAATAATTATAATATATGGAGATAAAAATTTATCAAAATCTATTAAAGATAGAAAAGAGAGAAGTCTATCACTTATGGATGCCGATAAAAATCTATTGATACCTATCAATATATTTATACATCTATTTTTATTATTGTCTGCGGATAGTTTGACAATTTTTTTTTATGGTTGAAATTTTTGATAAAATTAAATTAGATAACAGTGAAATGTAAGATTTCTGGAATGGCATCTTGAACCGCCAGCAACTGCAAAAACCCGCTTTTTTTTCCTTTCAAAACCAAAGCCATTACTCTTCTCTAATGAGACTCTTCTTCAAACGCCATTGCAGTAGTTTAACCTCTCAAAATCTCAAATTTTCTACTCACCCATCAACCATACAGTCTCAAATTCTCCAATTTTGCAGGTCCGGCCTACTCCACGATGCGCTACACATCCTAAACTCCATTGATTTGTTCGATTCCATCACCAATAAACCAATTCTCTACGCTTCTCTCTTACAAACCTGCACCAAGGTAGCTTCCTTCAGCCATGGCTGTCAAATTCATGCCCATGTTGTTAAATCTGGCCTCGAGACTGACCGCTTTGTTGGGAATAGCTTACTTTCTCTTTACTTTAAATTGGGTTCAGATCTTCTGCTGACTCGAAGAGTATTTGATGGTCTTTTTGTCAAGGATGTAGTGTCTTGGACATCCATGATTACGGGTTATGTTCGAGAAGGTAAATCTGGAAATGCGATTGAATTGTTTTGGGATATGTTGGATTTGGGGATAGAGCCGAATGGTTTTACTTTATCTGCTGTGATCAAGGCGTGCTCGGAGATTGGGAATTTGGTACTTGGTAGATGCTTTCATGGGGTTGTAATAAGGCATGGATTTGATTCAAATCATGTAATTGTGAGTTCTTTGATTGACATGTACGGGAGAAACTATGTGTCAAGTGATGCACGCCAACTGTTTGATGAATTGCTTGAACCAGATGCAATATGTTGGACATCGGTCATTTCAGCGTTTACAAGGAATGATTTGTATGAGGAAGCATTGGGATTCTTTTATTTGATGCAAAGAGCTTATAGGTTGCCTCCTGATGGTTTTACATTTGGAACTGTTTTGACTGCCTGTGGTAATTTGGGGAGGTTGAGGCAAGGTGAAGAGGTCCATGCTAAGGTGATTGCATATGGACTTGTTGGGAATGTGGTGGTTGGGAGTAGTCTGGTGGATATGTATGGTAAATGTGGAGCAGTTGAGAAGTCTCAACGTGTTTTCGATAGGATGTCGAAGAGGAATTCGGTTTCATGGTCTGCTTTGCTTGGAGTTTATTGCCAAAATGGTGACTTCGAAAAGGTTGTAAATCTTTTTAGGGAAATGGAGGAGGTCGATCTCTATAGTTTTGGGACGGTTATTCGTGCGTGTGCTGGGTTGGCAGCTGTAACTCAAGGGAAGGAGGTTCATTGTCAGTATGTAAGAAAGGGTGGATGGAGAGATGTCATTGTAGAATCAGCTTTAGTCGACTTGTATGCGAAATGTGGTTGTATTGATTTTGCATATAGAATCTTTGAGCAGATGCCAGTAAGAAACTTGATCACATGGAATTCGATGATTCGTGGTTTTGCTCAGAATGGAAGAGGTGGAATTGCTATTCAGATCTTTGAAGATATGATTAAGGAAGGGATTAAGCCAGATTATATCAGTTTTATTGGTGTCCTTTTTGCTTGTAGTCATACAGGTTTGGTCGATCAAGGGCGACATTACTTTGCTCTAATGACTGGTGAATATGGAATTAAACCAGGAATTGAGCATTATAATTGCATGGTTGATCTTCTAGGCCGTGCTGGGCTGCTAGAAGAAGCTGAAAATTTGATAGAAAATGCGGACTGTAGAAATGATTCAGCTCTTTGGCAGGTTCTTCTTGGAGCTTGCACTACATGTACAAACTATGCTACTGCAGAACGCATAGCCAAGAAGATGATGGAGCTTGAGCCTCAACACCATTTAAGTTATGTTCTGCTGGCTAATGTGTACAGAGCAGTAGGACGATGGGACGACGCGTTAAAGATTAGAAAGTTGATGAAAAACCGACAGGTGAAGAAGATGCCAGGTCAGAGCTGGATGTAA

mRNA sequence

ATGAAGTCCGGCCTACTCCACGATGCGCTACACATCCTAAACTCCATTGATTTGTTCGATTCCATCACCAATAAACCAATTCTCTACGCTTCTCTCTTACAAACCTGCACCAAGGTAGCTTCCTTCAGCCATGGCTGTCAAATTCATGCCCATGTTGTTAAATCTGGCCTCGAGACTGACCGCTTTGTTGGGAATAGCTTACTTTCTCTTTACTTTAAATTGGGTTCAGATCTTCTGCTGACTCGAAGAGTATTTGATGGTCTTTTTGTCAAGGATGTAGTGTCTTGGACATCCATGATTACGGGTTATGTTCGAGAAGGTAAATCTGGAAATGCGATTGAATTGTTTTGGGATATGTTGGATTTGGGGATAGAGCCGAATGGTTTTACTTTATCTGCTGTGATCAAGGCGTGCTCGGAGATTGGGAATTTGGTACTTGGTAGATGCTTTCATGGGGTTGTAATAAGGCATGGATTTGATTCAAATCATGTAATTGTGAGTTCTTTGATTGACATGTACGGGAGAAACTATGTGTCAAGTGATGCACGCCAACTGTTTGATGAATTGCTTGAACCAGATGCAATATGTTGGACATCGGTCATTTCAGCGTTTACAAGGAATGATTTGTATGAGGAAGCATTGGGATTCTTTTATTTGATGCAAAGAGCTTATAGGTTGCCTCCTGATGGTTTTACATTTGGAACTGTTTTGACTGCCTGTGGTAATTTGGGGAGGTTGAGGCAAGGTGAAGAGGTCCATGCTAAGGTGATTGCATATGGACTTGTTGGGAATGTGGTGGTTGGGAGTAGTCTGGTGGATATGTATGGTAAATGTGGAGCAGTTGAGAAGTCTCAACGTGTTTTCGATAGGATGTCGAAGAGGAATTCGGTTTCATGGTCTGCTTTGCTTGGAGTTTATTGCCAAAATGGTGACTTCGAAAAGGTTGTAAATCTTTTTAGGGAAATGGAGGAGGTCGATCTCTATAGTTTTGGGACGGTTATTCGTGCGTGTGCTGGGTTGGCAGCTGTAACTCAAGGGAAGGAGGTTCATTGTCAGTATGTAAGAAAGGGTGGATGGAGAGATGTCATTGTAGAATCAGCTTTAGTCGACTTGTATGCGAAATGTGGTTGTATTGATTTTGCATATAGAATCTTTGAGCAGATGCCAGTAAGAAACTTGATCACATGGAATTCGATGATTCGTGGTTTTGCTCAGAATGGAAGAGGTGGAATTGCTATTCAGATCTTTGAAGATATGATTAAGGAAGGGATTAAGCCAGATTATATCAGTTTTATTGGTGTCCTTTTTGCTTGTAGTCATACAGGTTTGGTCGATCAAGGGCGACATTACTTTGCTCTAATGACTGGTGAATATGGAATTAAACCAGGAATTGAGCATTATAATTGCATGGTTGATCTTCTAGGCCGTGCTGGGCTGCTAGAAGAAGCTGAAAATTTGATAGAAAATGCGGACTGTAGAAATGATTCAGCTCTTTGGCAGGTTCTTCTTGGAGCTTGCACTACATGTACAAACTATGCTACTGCAGAACGCATAGCCAAGAAGATGATGGAGCTTGAGCCTCAACACCATTTAAGTTATGTTCTGCTGGCTAATGTGTACAGAGCAGTAGGACGATGGGACGACGCGTTAAAGATTAGAAAGTTGATGAAAAACCGACAGGTGAAGAAGATGCCAGGTCAGAGCTGGATGTAA

Coding sequence (CDS)

ATGAAGTCCGGCCTACTCCACGATGCGCTACACATCCTAAACTCCATTGATTTGTTCGATTCCATCACCAATAAACCAATTCTCTACGCTTCTCTCTTACAAACCTGCACCAAGGTAGCTTCCTTCAGCCATGGCTGTCAAATTCATGCCCATGTTGTTAAATCTGGCCTCGAGACTGACCGCTTTGTTGGGAATAGCTTACTTTCTCTTTACTTTAAATTGGGTTCAGATCTTCTGCTGACTCGAAGAGTATTTGATGGTCTTTTTGTCAAGGATGTAGTGTCTTGGACATCCATGATTACGGGTTATGTTCGAGAAGGTAAATCTGGAAATGCGATTGAATTGTTTTGGGATATGTTGGATTTGGGGATAGAGCCGAATGGTTTTACTTTATCTGCTGTGATCAAGGCGTGCTCGGAGATTGGGAATTTGGTACTTGGTAGATGCTTTCATGGGGTTGTAATAAGGCATGGATTTGATTCAAATCATGTAATTGTGAGTTCTTTGATTGACATGTACGGGAGAAACTATGTGTCAAGTGATGCACGCCAACTGTTTGATGAATTGCTTGAACCAGATGCAATATGTTGGACATCGGTCATTTCAGCGTTTACAAGGAATGATTTGTATGAGGAAGCATTGGGATTCTTTTATTTGATGCAAAGAGCTTATAGGTTGCCTCCTGATGGTTTTACATTTGGAACTGTTTTGACTGCCTGTGGTAATTTGGGGAGGTTGAGGCAAGGTGAAGAGGTCCATGCTAAGGTGATTGCATATGGACTTGTTGGGAATGTGGTGGTTGGGAGTAGTCTGGTGGATATGTATGGTAAATGTGGAGCAGTTGAGAAGTCTCAACGTGTTTTCGATAGGATGTCGAAGAGGAATTCGGTTTCATGGTCTGCTTTGCTTGGAGTTTATTGCCAAAATGGTGACTTCGAAAAGGTTGTAAATCTTTTTAGGGAAATGGAGGAGGTCGATCTCTATAGTTTTGGGACGGTTATTCGTGCGTGTGCTGGGTTGGCAGCTGTAACTCAAGGGAAGGAGGTTCATTGTCAGTATGTAAGAAAGGGTGGATGGAGAGATGTCATTGTAGAATCAGCTTTAGTCGACTTGTATGCGAAATGTGGTTGTATTGATTTTGCATATAGAATCTTTGAGCAGATGCCAGTAAGAAACTTGATCACATGGAATTCGATGATTCGTGGTTTTGCTCAGAATGGAAGAGGTGGAATTGCTATTCAGATCTTTGAAGATATGATTAAGGAAGGGATTAAGCCAGATTATATCAGTTTTATTGGTGTCCTTTTTGCTTGTAGTCATACAGGTTTGGTCGATCAAGGGCGACATTACTTTGCTCTAATGACTGGTGAATATGGAATTAAACCAGGAATTGAGCATTATAATTGCATGGTTGATCTTCTAGGCCGTGCTGGGCTGCTAGAAGAAGCTGAAAATTTGATAGAAAATGCGGACTGTAGAAATGATTCAGCTCTTTGGCAGGTTCTTCTTGGAGCTTGCACTACATGTACAAACTATGCTACTGCAGAACGCATAGCCAAGAAGATGATGGAGCTTGAGCCTCAACACCATTTAAGTTATGTTCTGCTGGCTAATGTGTACAGAGCAGTAGGACGATGGGACGACGCGTTAAAGATTAGAAAGTTGATGAAAAACCGACAGGTGAAGAAGATGCCAGGTCAGAGCTGGATGTAA

Protein sequence

MKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSDARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACGNLGRLRQGEEVHAKVIAYGLVGNVVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVVNLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKEGIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADCRNDSALWQVLLGACTTCTNYATAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALKIRKLMKNRQVKKMPGQSWM

Homology

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BLAST of Lsi11G015230 vs. ExPASy Swiss-Prot
Match: Q9LR69 (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E4 PE=2 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 1.1e-218
Identity = 366/570 (64.21%), Postives = 447/570 (78.42%), Query Frame = 0


Query: 2   KSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDR 61
           K G L +A+ ILNS      I   P LYASLLQTC KV SF HG Q HAHVVKSGLETDR
Sbjct: 38  KLGQLTEAIRILNSTH-SSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDR 97

Query: 62  FVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLD 121
            VGNSLLSLYFKLG  +  TRRVFDG FVKD +SWTSM++GYV   +   A+E+F +M+ 
Sbjct: 98  NVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVS 157

Query: 122 LGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSD 181
            G++ N FTLS+ +KACSE+G + LGRCFHGVVI HGF+ NH I S+L  +YG N    D
Sbjct: 158 FGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD 217

Query: 182 ARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACG 241
           AR++FDE+ EPD ICWT+V+SAF++NDLYEEALG FY M R   L PDG TFGTVLTACG
Sbjct: 218 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 277

Query: 242 NLGRLRQGEEVHAKVIAYGLVGNVVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSA 301
           NL RL+QG+E+H K+I  G+  NVVV SSL+DMYGKCG+V ++++VF+ MSK+NSVSWSA
Sbjct: 278 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 337

Query: 302 LLGVYCQNGDFEKVVNLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRD 361
           LLG YCQNG+ EK + +FREMEE DLY FGTV++ACAGLAAV  GKE+H QYVR+G + +
Sbjct: 338 LLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN 397

Query: 362 VIVESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIK 421
           VIVESAL+DLY K GCID A R++ +M +RN+ITWN+M+   AQNGRG  A+  F DM+K
Sbjct: 398 VIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVK 457

Query: 422 EGIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLE 481
           +GIKPDYISFI +L AC HTG+VD+GR+YF LM   YGIKPG EHY+CM+DLLGRAGL E
Sbjct: 458 KGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFE 517

Query: 482 EAENLIENADCRNDSALWQVLLGACTTCTNYA-TAERIAKKMMELEPQHHLSYVLLANVY 541
           EAENL+E A+CRND++LW VLLG C    + +  AERIAK+MMELEP++H+SYVLL+N+Y
Sbjct: 518 EAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMY 577

Query: 542 RAVGRWDDALKIRKLMKNRQVKKMPGQSWM 571
           +A+GR  DAL IRKLM  R V K  GQSW+
Sbjct: 578 KAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606

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BLAST of Lsi11G015230 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 6.0e-111
Identity = 215/617 (34.85%), Postives = 350/617 (56.73%), Query Frame = 0


Query: 29  YASLLQTCTK-VASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDG 88
           +A LL +C K   S  +   +HA V+KSG   + F+ N L+  Y K GS L   R+VFD 
Sbjct: 22  FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGS-LEDGRQVFDK 81

Query: 89  LFVKDVVSWTSMITGYVREGKSGNAIELF----------WDMLDLGIEP----------- 148
           +  +++ +W S++TG  + G    A  LF          W+ +  G              
Sbjct: 82  MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 141

Query: 149 ----------NGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRN 208
                     N ++ ++V+ ACS + ++  G   H ++ +  F S+  I S+L+DMY + 
Sbjct: 142 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 201

Query: 209 YVSSDARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTV 268
              +DA+++FDE+ + + + W S+I+ F +N    EAL  F +M  + R+ PD  T  +V
Sbjct: 202 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLES-RVEPDEVTLASV 261

Query: 269 LTACGNLGRLRQGEEVHAKVIAYGLVGN-VVVGSSLVDMYGKCGAVEKSQRVFD------ 328
           ++AC +L  ++ G+EVH +V+    + N +++ ++ VDMY KC  +++++ +FD      
Sbjct: 262 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 321

Query: 329 -------------------------RMSKRNSVSWSALLGVYCQNGDFEKVVNLF----R 388
                                    +M++RN VSW+AL+  Y QNG+ E+ ++LF    R
Sbjct: 322 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 381

Query: 389 EMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWR-------DVIVESALVDLYA 448
           E      YSF  +++ACA LA +  G + H  +V K G++       D+ V ++L+D+Y 
Sbjct: 382 ESVCPTHYSFANILKACADLAELHLGMQAHV-HVLKHGFKFQSGEEDDIFVGNSLIDMYV 441

Query: 449 KCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKEGIKPDYISFIG 508
           KCGC++  Y +F +M  R+ ++WN+MI GFAQNG G  A+++F +M++ G KPD+I+ IG
Sbjct: 442 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 501

Query: 509 VLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADCR 568
           VL AC H G V++GRHYF+ MT ++G+ P  +HY CMVDLLGRAG LEEA+++IE    +
Sbjct: 502 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 561

Query: 569 NDSALWQVLLGACTTCTNYATAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALKIR 571
            DS +W  LL AC    N    + +A+K++E+EP +   YVLL+N+Y  +G+W+D + +R
Sbjct: 562 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 621

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BLAST of Lsi11G015230 vs. ExPASy Swiss-Prot
Match: Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 4.0e-107
Identity = 203/549 (36.98%), Postives = 325/549 (59.20%), Query Frame = 0


Query: 27  ILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFD 86
           + +  +L T  KV S + G Q+H   +K GL+    V NSL+++Y KL       R VFD
Sbjct: 316 VTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL-RKFGFARTVFD 375

Query: 87  GLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEI-GNLV 146
            +  +D++SW S+I G  + G    A+ LF  +L  G++P+ +T+++V+KA S +   L 
Sbjct: 376 NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLS 435

Query: 147 LGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSDARQLFDELLEPDAICWTSVISAFT 206
           L +  H   I+    S+  + ++LID Y RN    +A  LF E    D + W ++++ +T
Sbjct: 436 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYT 495

Query: 207 RNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACGNLGRLRQGEEVHAKVIAYGLVGNV 266
           ++    + L  F LM +      D FT  TV   CG L  + QG++VHA  I  G   ++
Sbjct: 496 QSHDGHKTLKLFALMHKQGE-RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 555

Query: 267 VVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVVNLFREMEEV 326
            V S ++DMY KCG +  +Q  FD +   + V+W+ ++    +NG+ E+  ++F +M  +
Sbjct: 556 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 615

Query: 327 ----DLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFA 386
               D ++  T+ +A + L A+ QG+++H   ++     D  V ++LVD+YAKCG ID A
Sbjct: 616 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 675

Query: 387 YRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKEGIKPDYISFIGVLFACSHT 446
           Y +F+++ + N+  WN+M+ G AQ+G G   +Q+F+ M   GIKPD ++FIGVL ACSH+
Sbjct: 676 YCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 735

Query: 447 GLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADCRNDSALWQV 506
           GLV +   +   M G+YGIKP IEHY+C+ D LGRAGL+++AENLIE+      +++++ 
Sbjct: 736 GLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRT 795

Query: 507 LLGACTTCTNYATAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALKIRKLMKNRQV 566
           LL AC    +  T +R+A K++ELEP    +YVLL+N+Y A  +WD+    R +MK  +V
Sbjct: 796 LLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKV 855

Query: 567 KKMPGQSWM 571
           KK PG SW+
Sbjct: 856 KKDPGFSWI 861

[Close]

BLAST of Lsi11G015230 vs. ExPASy Swiss-Prot
Match: Q9FWA6 (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 381.3 bits (978), Expect = 1.9e-104
Identity = 199/568 (35.04%), Postives = 322/568 (56.69%), Query Frame = 0


Query: 28  LYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDG 87
           +YAS+L++C  ++    G Q+HAH +KS    D  V  + L +Y K   ++   + +FD 
Sbjct: 283 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKC-DNMQDAQILFDN 342

Query: 88  LFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 147
               +  S+ +MITGY +E     A+ LF  ++  G+  +  +LS V +AC+ +  L  G
Sbjct: 343 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 402

Query: 148 RCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSDARQLFDELLEPDAICWTSVISAFTRN 207
              +G+ I+     +  + ++ IDMYG+    ++A ++FDE+   DA+ W ++I+A  +N
Sbjct: 403 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQN 462

Query: 208 DLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACGNLGRLRQGEEVHAKVIAYGLVGNVVV 267
               E L  F  M R+ R+ PD FTFG++L AC   G L  G E+H+ ++  G+  N  V
Sbjct: 463 GKGYETLFLFVSMLRS-RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSV 522

Query: 268 GSSLVDMYGKCGAVEKSQRVFDRMSKRNS--------------------VSWSALLGVYC 327
           G SL+DMY KCG +E+++++  R  +R +                    VSW++++  Y 
Sbjct: 523 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 582

Query: 328 QNGDFEKVVNLFREMEEV----DLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVI 387
                E    LF  M E+    D +++ TV+  CA LA+   GK++H Q ++K    DV 
Sbjct: 583 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 642

Query: 388 VESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKEG 447
           + S LVD+Y+KCG +  +  +FE+   R+ +TWN+MI G+A +G+G  AIQ+FE MI E 
Sbjct: 643 ICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN 702

Query: 448 IKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEEA 507
           IKP++++FI +L AC+H GL+D+G  YF +M  +YG+ P + HY+ MVD+LG++G ++ A
Sbjct: 703 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 762

Query: 508 ENLIENADCRNDSALWQVLLGACTT-CTNYATAERIAKKMMELEPQHHLSYVLLANVYRA 567
             LI       D  +W+ LLG CT    N   AE     ++ L+PQ   +Y LL+NVY  
Sbjct: 763 LELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYAD 822

Query: 568 VGRWDDALKIRKLMKNRQVKKMPGQSWM 571
            G W+    +R+ M+  ++KK PG SW+
Sbjct: 823 AGMWEKVSDLRRNMRGFKLKKEPGCSWV 847

[Close]

BLAST of Lsi11G015230 vs. ExPASy Swiss-Prot
Match: Q9S7F4 (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H36 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 5.4e-104
Identity = 202/551 (36.66%), Postives = 311/551 (56.44%), Query Frame = 0


Query: 27  ILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRF--VGNSLLSLYFKLGSDLLLTRRV 86
           + + +LL  C      +   Q+HA  VK G +T+ F  V N LL  Y ++   L L   +
Sbjct: 148 VTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV-RRLDLACVL 207

Query: 87  FDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNL 146
           F+ +  KD V++ ++ITGY ++G    +I LF  M   G +P+ FT S V+KA   + + 
Sbjct: 208 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 267

Query: 147 VLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSDARQLFDELLEPDAICWTSVISAF 206
            LG+  H + +  GF  +  + + ++D Y ++    + R LFDE+ E D + +  VIS++
Sbjct: 268 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 327

Query: 207 TRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACGNLGRLRQGEEVHAKVIAYGLVGN 266
           ++ D YE +L FF  MQ         F F T+L+   NL  L+ G ++H + +       
Sbjct: 328 SQADQYEASLHFFREMQ-CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 387

Query: 267 VVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVVNLFREME- 326
           + VG+SLVDMY KC   E+++ +F  + +R +VSW+AL+  Y Q G     + LF +M  
Sbjct: 388 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 447

Query: 327 ---EVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDF 386
                D  +F TV++A A  A++  GK++H   +R G   +V   S LVD+YAKCG I  
Sbjct: 448 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 507

Query: 387 AYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKEGIKPDYISFIGVLFACSH 446
           A ++FE+MP RN ++WN++I   A NG G  AI  F  MI+ G++PD +S +GVL ACSH
Sbjct: 508 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 567

Query: 447 TGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADCRNDSALWQ 506
            G V+QG  YF  M+  YGI P  +HY CM+DLLGR G   EAE L++      D  +W 
Sbjct: 568 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 627

Query: 507 VLLGACTTCTNYATAERIAKKMMELEP-QHHLSYVLLANVYRAVGRWDDALKIRKLMKNR 566
            +L AC    N + AER A+K+  +E  +   +YV ++N+Y A G W+    ++K M+ R
Sbjct: 628 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 687

Query: 567 QVKKMPGQSWM 571
            +KK+P  SW+
Sbjct: 688 GIKKVPAYSWV 696

[Close]

BLAST of Lsi11G015230 vs. ExPASy TrEMBL
Match: A0A6J1D3F1 (pentatricopeptide repeat-containing protein At1g03540 OS=Momordica charantia OX=3673 GN=LOC111016671 PE=4 SV=1)

HSP 1 Score: 1102.8 bits (2851), Expect = 0.0e+00
Identity = 532/569 (93.50%), Postives = 551/569 (96.84%), Query Frame = 0


Query: 2   KSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDR 61
           +SGLLHDALHILNS+DLFD+ TNKPILYASLLQTC KVASFSHG QIHAHVVKSGLETDR
Sbjct: 35  RSGLLHDALHILNSVDLFDTATNKPILYASLLQTCIKVASFSHGRQIHAHVVKSGLETDR 94

Query: 62  FVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLD 121
           FVGNSLLSLYFKLGSD LLTRRVFDGLFVKDVVSWTSMITGYVREGK GNAIELFWDMLD
Sbjct: 95  FVGNSLLSLYFKLGSDYLLTRRVFDGLFVKDVVSWTSMITGYVREGKPGNAIELFWDMLD 154

Query: 122 LGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSD 181
           LGIEPNGFT+SAVIKACSEIGNLVLGRCFHG+V+RHGFDSNHVIVSSLIDMYGRN  S+D
Sbjct: 155 LGIEPNGFTISAVIKACSEIGNLVLGRCFHGLVLRHGFDSNHVIVSSLIDMYGRNCASND 214

Query: 182 ARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACG 241
           ARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFY MQR YRL PDGFTFGTVLTACG
Sbjct: 215 ARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYSMQRTYRLSPDGFTFGTVLTACG 274

Query: 242 NLGRLRQGEEVHAKVIAYGLVGNVVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSA 301
           NLGRLRQGEEVHAKVIA+GL GNVVV SSLVDMYGKCGAV+KSQ VFDRMS+RNSVSWSA
Sbjct: 275 NLGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVDKSQLVFDRMSRRNSVSWSA 334

Query: 302 LLGVYCQNGDFEKVVNLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRD 361
           LLGVYCQNGDFE V+NLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRD
Sbjct: 335 LLGVYCQNGDFEMVINLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRD 394

Query: 362 VIVESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIK 421
           VIVESALVDLYAKCGCIDFAYRIFEQMP +NLITWNSMIRGFAQNG+GGIA+QIFE+MIK
Sbjct: 395 VIVESALVDLYAKCGCIDFAYRIFEQMPSKNLITWNSMIRGFAQNGQGGIALQIFEEMIK 454

Query: 422 EGIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLE 481
           EGIKPDYISFIGVLFACSHTGLVDQGRHYFALMT +YGIKPGIEHYNCMVDLLGR GLLE
Sbjct: 455 EGIKPDYISFIGVLFACSHTGLVDQGRHYFALMTEQYGIKPGIEHYNCMVDLLGRTGLLE 514

Query: 482 EAENLIENADCRNDSALWQVLLGACTTCTNYATAERIAKKMMELEPQHHLSYVLLANVYR 541
           EAENLIENADCRNDS+LWQVLLGACTTCTN ATAERIAKKMMELEP+HHLSYVLLANVYR
Sbjct: 515 EAENLIENADCRNDSSLWQVLLGACTTCTNSATAERIAKKMMELEPRHHLSYVLLANVYR 574

Query: 542 AVGRWDDALKIRKLMKNRQVKKMPGQSWM 571
           AVGRWDDALKIRKLMKNRQVKKMPGQSW+
Sbjct: 575 AVGRWDDALKIRKLMKNRQVKKMPGQSWI 603

[Close]

BLAST of Lsi11G015230 vs. ExPASy TrEMBL
Match: A0A6J1EVR7 (pentatricopeptide repeat-containing protein At1g03540 OS=Cucurbita moschata OX=3662 GN=LOC111437022 PE=4 SV=1)

HSP 1 Score: 1063.5 bits (2749), Expect = 3.0e-307
Identity = 515/568 (90.67%), Postives = 537/568 (94.54%), Query Frame = 0


Query: 3   SGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRF 62
           SGLL+DALH LNS+D FDS TNK ILYASLLQTCTKVASFSHG QIHAHV+KSGLE DRF
Sbjct: 36  SGLLYDALHTLNSLDSFDSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRF 95

Query: 63  VGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDL 122
           VGNSLLSLYFKLGSD+ LTRRVFDGLFVKDVVSWTSMIT YVREGK GNAIELFWDMLDL
Sbjct: 96  VGNSLLSLYFKLGSDVRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDL 155

Query: 123 GIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSDA 182
           GIEPNGFTLSAVIKACSEIGNLVLGRCFHG+V+RHGF+SNHVIVSSLIDMYGRN+ SSDA
Sbjct: 156 GIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDA 215

Query: 183 RQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACGN 242
           RQLFDE+ EPDAICWTSVISA TRNDLYE+ALGFFYLM R Y L PDGFTFG+VLTAC N
Sbjct: 216 RQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACAN 275

Query: 243 LGRLRQGEEVHAKVIAYGLVGNVVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSAL 302
           LGRLRQGEEVHAKVI +GL GNVVV SSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSAL
Sbjct: 276 LGRLRQGEEVHAKVIVHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSAL 335

Query: 303 LGVYCQNGDFEKVVNLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV 362
           LGVYCQNGDFEKV+N+FR ME++DLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV
Sbjct: 336 LGVYCQNGDFEKVINIFRGMEKIDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV 395

Query: 363 IVESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKE 422
           IVESALVDLYAKCGCIDFAYRIFEQMP RNLITWNSMIRGFAQNGR GI+I+IFE+MIKE
Sbjct: 396 IVESALVDLYAKCGCIDFAYRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKE 455

Query: 423 GIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEE 482
           GIKPDYISFIGVLFACSHTGLVDQGRHYF  MT EYGIKPGIEHYNCMVDLLGRAGLLEE
Sbjct: 456 GIKPDYISFIGVLFACSHTGLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEE 515

Query: 483 AENLIENADCRNDSALWQVLLGACTTCTNYATAERIAKKMMELEPQHHLSYVLLANVYRA 542
           AENLIENAD RNDS+LWQVLLGACTT TN  TAERIAKKMMELEPQHHLSYVLLANVYRA
Sbjct: 516 AENLIENADFRNDSSLWQVLLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRA 575

Query: 543 VGRWDDALKIRKLMKNRQVKKMPGQSWM 571
           VGRWDDAL IRKLMK+RQVKK+PGQSWM
Sbjct: 576 VGRWDDALTIRKLMKSRQVKKVPGQSWM 603

[Close]

BLAST of Lsi11G015230 vs. ExPASy TrEMBL
Match: A0A6J1JMC8 (pentatricopeptide repeat-containing protein At1g03540 OS=Cucurbita maxima OX=3661 GN=LOC111485968 PE=4 SV=1)

HSP 1 Score: 1060.4 bits (2741), Expect = 2.6e-306
Identity = 511/568 (89.96%), Postives = 537/568 (94.54%), Query Frame = 0


Query: 3   SGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRF 62
           SGLLHDALH LNS+D F+S TNK ILYASLLQTCTKVASFSHG QIHAHV+KSGLETDRF
Sbjct: 36  SGLLHDALHTLNSLDSFNSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLETDRF 95

Query: 63  VGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDL 122
           VGNSLLSLYFKLGSD  LTRRVFDGLFVKDVVSWTSMIT YVREGK GNAIE FWDMLDL
Sbjct: 96  VGNSLLSLYFKLGSDFRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIEFFWDMLDL 155

Query: 123 GIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSDA 182
           GIEPNGFTLSAVIKACSEIGNL+LGRCFHG+V+RHGF+SNHVIVSSLIDMYGRN+ SSDA
Sbjct: 156 GIEPNGFTLSAVIKACSEIGNLILGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDA 215

Query: 183 RQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACGN 242
           RQLFDE+ EPDAICWTSVISA TRNDLYE+ALGFFYLM R Y L PDGFTFG+VLTAC N
Sbjct: 216 RQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACAN 275

Query: 243 LGRLRQGEEVHAKVIAYGLVGNVVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSAL 302
           LGRLRQGEEVHAKVIA+GL GNVVV SSLVDMYGKCGA+EKSQ VFDRMSKRNSVSWSAL
Sbjct: 276 LGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAIEKSQLVFDRMSKRNSVSWSAL 335

Query: 303 LGVYCQNGDFEKVVNLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV 362
           LGVYCQNGDFEKV+N+FR ME++DLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV
Sbjct: 336 LGVYCQNGDFEKVINIFRGMEKIDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV 395

Query: 363 IVESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKE 422
           IVESALVDLYAKCGCIDFAYRIFE+MP RNLITWNSMIRGFAQNGR GI+I+IFE+MIKE
Sbjct: 396 IVESALVDLYAKCGCIDFAYRIFERMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKE 455

Query: 423 GIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEE 482
           GIKPDYISFIGVLFACSHTGLVDQGRHYF LMT EYGIKPGIEHYNCMVDLLGRAGLLEE
Sbjct: 456 GIKPDYISFIGVLFACSHTGLVDQGRHYFVLMTEEYGIKPGIEHYNCMVDLLGRAGLLEE 515

Query: 483 AENLIENADCRNDSALWQVLLGACTTCTNYATAERIAKKMMELEPQHHLSYVLLANVYRA 542
           AENLIENAD R+DS+LWQVLLGACTT TN  TAERIAKKMMELEPQHHLSYVLLANVYRA
Sbjct: 516 AENLIENADFRSDSSLWQVLLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRA 575

Query: 543 VGRWDDALKIRKLMKNRQVKKMPGQSWM 571
           VGRWDDAL +RKLMK+RQVKK+PGQSWM
Sbjct: 576 VGRWDDALTVRKLMKSRQVKKVPGQSWM 603

[Close]

BLAST of Lsi11G015230 vs. ExPASy TrEMBL
Match: A0A0A0K5P0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047230 PE=4 SV=1)

HSP 1 Score: 1024.2 bits (2647), Expect = 2.0e-295
Identity = 495/570 (86.84%), Postives = 529/570 (92.81%), Query Frame = 0


Query: 2   KSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDR 61
           KSGLL+DALH+LNSIDL+DS  NKP+LYASLLQTC KV SF+ G Q HAHVVKSGLETDR
Sbjct: 36  KSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDR 95

Query: 62  FVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLD 121
           FVGNSLLSLYFKLGSD LLTRRVFDGLFVKDVVSW SMITGYVREGKSG AIELFWDMLD
Sbjct: 96  FVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLD 155

Query: 122 LGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSD 181
            GIEPNGFTLSAVIKACSEIGNLVLG+CFHGVV+R GFDSN VI+SSLIDMYGRN VSSD
Sbjct: 156 SGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSD 215

Query: 182 ARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACG 241
           ARQLFDELLEPD +CWT+VISAFTRNDLYEEALGFFYL  RA+RL PD +TFG+VLTACG
Sbjct: 216 ARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACG 275

Query: 242 NLGRLRQGEEVHAKVIAYGLVGNVVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSA 301
           NLGRLRQGEE+HAKVIAYG  GNVV  SSLVDMYGKCGAVEKSQR+FDRMS RNSVSWSA
Sbjct: 276 NLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSA 335

Query: 302 LLGVYCQNGDFEKVVNLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRD 361
           LL VYC NGD+EK VNLFREM+EVDLYSFGTVIRACAGLAAVT GKE+HCQY+RKGGWRD
Sbjct: 336 LLAVYCHNGDYEKAVNLFREMKEVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRD 395

Query: 362 VIVESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIK 421
           VIVESALVDLYAKCGCI+FAYR+F++MP RNLITWNSMI GFAQNG  GIAIQIFE MIK
Sbjct: 396 VIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIK 455

Query: 422 EGIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLE 481
           EGIKPD ISFIG+LFACSHTGLVDQ RHYF LMTG+YGIKPG+EHYNCMVDLLGRAGLLE
Sbjct: 456 EGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLE 515

Query: 482 EAENLIENADCRNDSALWQVLLGAC-TTCTNYATAERIAKKMMELEPQHHLSYVLLANVY 541
           EAENLIENA+CRNDS+LW VLLGAC TTCTN ATAERIAKK+MELEPQ +LSYV LANVY
Sbjct: 516 EAENLIENAECRNDSSLWLVLLGACTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVY 575

Query: 542 RAVGRWDDALKIRKLMKNRQVKKMPGQSWM 571
           RAVGRWDDA+K+R+LMKNRQ+KKMPGQSWM
Sbjct: 576 RAVGRWDDAVKVRELMKNRQLKKMPGQSWM 605

[Close]

BLAST of Lsi11G015230 vs. ExPASy TrEMBL
Match: A0A5A7SR37 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003650 PE=4 SV=1)

HSP 1 Score: 1021.1 bits (2639), Expect = 1.7e-294
Identity = 497/570 (87.19%), Postives = 527/570 (92.46%), Query Frame = 0


Query: 2   KSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDR 61
           KSGLL+DALHILNS+DL+DS  NKP+LYASLLQTCTKV SFS GCQ HAHVVKSGLETDR
Sbjct: 36  KSGLLNDALHILNSVDLYDSRINKPLLYASLLQTCTKVDSFSSGCQFHAHVVKSGLETDR 95

Query: 62  FVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLD 121
           FVGNSLLSLYFKLGS+ LLTRRVFDGLFVKDVVSW SMITGYVREGKSG AIELFWDMLD
Sbjct: 96  FVGNSLLSLYFKLGSNCLLTRRVFDGLFVKDVVSWASMITGYVREGKSGMAIELFWDMLD 155

Query: 122 LGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSD 181
            GIEPN FTLS VIKACSEIGNLVLG+CFHGVV+R GFDSN VI+SSLIDMYGRNY+SS+
Sbjct: 156 SGIEPNDFTLSTVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNYLSSE 215

Query: 182 ARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACG 241
           ARQLFDELLEPD +CWT+VISAFTRND YEEALGFFYLM RAYRL PD +TFG+VLTACG
Sbjct: 216 ARQLFDELLEPDPVCWTTVISAFTRNDFYEEALGFFYLMHRAYRLSPDNYTFGSVLTACG 275

Query: 242 NLGRLRQGEEVHAKVIAYGLVGNVVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSA 301
           NLGRL+QGEE+HAKVIAYG  GNVVV SSLVDMYGKCGAVEKSQRVFDRMS RNSVSWSA
Sbjct: 276 NLGRLKQGEEIHAKVIAYGFGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSNRNSVSWSA 335

Query: 302 LLGVYCQNGDFEKVVNLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRD 361
           LL VYCQNGDFEKVV+LFREM++VDLYSFGTV+RACAGLAAV  GKEVHCQY+RKGGWRD
Sbjct: 336 LLAVYCQNGDFEKVVSLFREMKKVDLYSFGTVLRACAGLAAVAPGKEVHCQYIRKGGWRD 395

Query: 362 VIVESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIK 421
           VIVESALVDLYAKCG IDFAYRIFE+MP RNLITWN+MI GFAQNGR  IAIQIFE MIK
Sbjct: 396 VIVESALVDLYAKCGSIDFAYRIFERMPTRNLITWNAMIHGFAQNGRSEIAIQIFEAMIK 455

Query: 422 EGIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLE 481
           EGIKPD ISFIG+LFACSHTGLVDQ RHYF LMTGEYGIKPGIEHYNCMVDLLGRAGLLE
Sbjct: 456 EGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGEYGIKPGIEHYNCMVDLLGRAGLLE 515

Query: 482 EAENLIENADCRNDSALWQVLLGACT-TCTNYATAERIAKKMMELEPQHHLSYVLLANVY 541
           EAENLIENADCRNDSALW VLLGA T T TN A AERIAKK+MELEPQ +LSYV LAN Y
Sbjct: 516 EAENLIENADCRNDSALWLVLLGASTATWTNSAIAERIAKKLMELEPQCYLSYVHLANFY 575

Query: 542 RAVGRWDDALKIRKLMKNRQVKKMPGQSWM 571
           RAVGRWDDA+K+R+LMKNRQ+KKMPGQSWM
Sbjct: 576 RAVGRWDDAVKVRELMKNRQLKKMPGQSWM 605

[Close]

BLAST of Lsi11G015230 vs. NCBI nr
Match: XP_038888158.1 (pentatricopeptide repeat-containing protein At1g03540 [Benincasa hispida])

HSP 1 Score: 1124.4 bits (2907), Expect = 0.0e+00
Identity = 545/569 (95.78%), Postives = 557/569 (97.89%), Query Frame = 0


Query: 2   KSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDR 61
           +SGLLHDALHILNSIDLF+SITNKPI+YASLLQTCTKVASFSHGCQIHA VVKSGLETDR
Sbjct: 35  RSGLLHDALHILNSIDLFNSITNKPIVYASLLQTCTKVASFSHGCQIHAQVVKSGLETDR 94

Query: 62  FVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLD 121
           FVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLD
Sbjct: 95  FVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLD 154

Query: 122 LGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSD 181
            GI+PN FTLSAVIKACSEIGNLVLG+CFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSD
Sbjct: 155 WGIQPNSFTLSAVIKACSEIGNLVLGKCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSD 214

Query: 182 ARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACG 241
           ARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFY MQRAYRL PDG+TFGTVLTACG
Sbjct: 215 ARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYFMQRAYRLSPDGYTFGTVLTACG 274

Query: 242 NLGRLRQGEEVHAKVIAYGLVGNVVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSA 301
           NLGRLRQGEEVHAKVIAYGL GNVVV SSLVDMYGKCGAVEKS+RVFDRMSKRNSVSWSA
Sbjct: 275 NLGRLRQGEEVHAKVIAYGLGGNVVVESSLVDMYGKCGAVEKSRRVFDRMSKRNSVSWSA 334

Query: 302 LLGVYCQNGDFEKVVNLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRD 361
           LLGVYCQNGDFEKVVNLFREM+EVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRD
Sbjct: 335 LLGVYCQNGDFEKVVNLFREMKEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRD 394

Query: 362 VIVESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIK 421
           VIVESALVDLYAKCGCIDFAYRIFEQMP RNLITWNSMI G AQNGRGGIAIQIFE+MIK
Sbjct: 395 VIVESALVDLYAKCGCIDFAYRIFEQMPTRNLITWNSMIGGLAQNGRGGIAIQIFEEMIK 454

Query: 422 EGIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLE 481
           EGIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPG+EHYNCMVDLLGRAGLLE
Sbjct: 455 EGIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGVEHYNCMVDLLGRAGLLE 514

Query: 482 EAENLIENADCRNDSALWQVLLGACTTCTNYATAERIAKKMMELEPQHHLSYVLLANVYR 541
           EAENLIENADCRN+S+LWQVLLGACTTCTN ATAERIAKKMMELEPQHHLSYVLLANVYR
Sbjct: 515 EAENLIENADCRNNSSLWQVLLGACTTCTNSATAERIAKKMMELEPQHHLSYVLLANVYR 574

Query: 542 AVGRWDDALKIRKLMKNRQVKKMPGQSWM 571
           AVGRWDDALKIR LMKNRQVKKMPGQSWM
Sbjct: 575 AVGRWDDALKIRNLMKNRQVKKMPGQSWM 603

[Close]

BLAST of Lsi11G015230 vs. NCBI nr
Match: XP_022147827.1 (pentatricopeptide repeat-containing protein At1g03540 [Momordica charantia])

HSP 1 Score: 1102.8 bits (2851), Expect = 0.0e+00
Identity = 532/569 (93.50%), Postives = 551/569 (96.84%), Query Frame = 0


Query: 2   KSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDR 61
           +SGLLHDALHILNS+DLFD+ TNKPILYASLLQTC KVASFSHG QIHAHVVKSGLETDR
Sbjct: 35  RSGLLHDALHILNSVDLFDTATNKPILYASLLQTCIKVASFSHGRQIHAHVVKSGLETDR 94

Query: 62  FVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLD 121
           FVGNSLLSLYFKLGSD LLTRRVFDGLFVKDVVSWTSMITGYVREGK GNAIELFWDMLD
Sbjct: 95  FVGNSLLSLYFKLGSDYLLTRRVFDGLFVKDVVSWTSMITGYVREGKPGNAIELFWDMLD 154

Query: 122 LGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSD 181
           LGIEPNGFT+SAVIKACSEIGNLVLGRCFHG+V+RHGFDSNHVIVSSLIDMYGRN  S+D
Sbjct: 155 LGIEPNGFTISAVIKACSEIGNLVLGRCFHGLVLRHGFDSNHVIVSSLIDMYGRNCASND 214

Query: 182 ARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACG 241
           ARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFY MQR YRL PDGFTFGTVLTACG
Sbjct: 215 ARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYSMQRTYRLSPDGFTFGTVLTACG 274

Query: 242 NLGRLRQGEEVHAKVIAYGLVGNVVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSA 301
           NLGRLRQGEEVHAKVIA+GL GNVVV SSLVDMYGKCGAV+KSQ VFDRMS+RNSVSWSA
Sbjct: 275 NLGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVDKSQLVFDRMSRRNSVSWSA 334

Query: 302 LLGVYCQNGDFEKVVNLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRD 361
           LLGVYCQNGDFE V+NLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRD
Sbjct: 335 LLGVYCQNGDFEMVINLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRD 394

Query: 362 VIVESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIK 421
           VIVESALVDLYAKCGCIDFAYRIFEQMP +NLITWNSMIRGFAQNG+GGIA+QIFE+MIK
Sbjct: 395 VIVESALVDLYAKCGCIDFAYRIFEQMPSKNLITWNSMIRGFAQNGQGGIALQIFEEMIK 454

Query: 422 EGIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLE 481
           EGIKPDYISFIGVLFACSHTGLVDQGRHYFALMT +YGIKPGIEHYNCMVDLLGR GLLE
Sbjct: 455 EGIKPDYISFIGVLFACSHTGLVDQGRHYFALMTEQYGIKPGIEHYNCMVDLLGRTGLLE 514

Query: 482 EAENLIENADCRNDSALWQVLLGACTTCTNYATAERIAKKMMELEPQHHLSYVLLANVYR 541
           EAENLIENADCRNDS+LWQVLLGACTTCTN ATAERIAKKMMELEP+HHLSYVLLANVYR
Sbjct: 515 EAENLIENADCRNDSSLWQVLLGACTTCTNSATAERIAKKMMELEPRHHLSYVLLANVYR 574

Query: 542 AVGRWDDALKIRKLMKNRQVKKMPGQSWM 571
           AVGRWDDALKIRKLMKNRQVKKMPGQSW+
Sbjct: 575 AVGRWDDALKIRKLMKNRQVKKMPGQSWI 603

[Close]

BLAST of Lsi11G015230 vs. NCBI nr
Match: KAG6589200.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1066.2 bits (2756), Expect = 9.6e-308
Identity = 516/568 (90.85%), Postives = 538/568 (94.72%), Query Frame = 0


Query: 3   SGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRF 62
           SGLLHDALH LNS+D FDS TNK ILYASLLQTCTKVASFSHG QIHAHV+KSGLE DRF
Sbjct: 36  SGLLHDALHTLNSLDSFDSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRF 95

Query: 63  VGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDL 122
           VGNSLLSLYFKLGSD+ LTRRVFDGLFVKDVVSWTSMIT YVREGK GNAIELFWDMLDL
Sbjct: 96  VGNSLLSLYFKLGSDVRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDL 155

Query: 123 GIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSDA 182
           GIEPNGFTLSAVIKACSEIGNLVLGRCFHG+V+RHGF+SNHVIVSSLIDMYGRN+ SSDA
Sbjct: 156 GIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDA 215

Query: 183 RQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACGN 242
           RQLFDE+ EPDAICWTSVISA TRNDLYE+ALGFFYLM R Y L PDGFTFG+VLTAC N
Sbjct: 216 RQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACAN 275

Query: 243 LGRLRQGEEVHAKVIAYGLVGNVVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSAL 302
           LGRLRQGEEVHAKVIA+GL GNVVV SSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSAL
Sbjct: 276 LGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSAL 335

Query: 303 LGVYCQNGDFEKVVNLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV 362
           LGVYCQNGDFEKV+N+FR ME++DLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV
Sbjct: 336 LGVYCQNGDFEKVINIFRGMEKIDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV 395

Query: 363 IVESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKE 422
           IVESALVDLYAKCGCIDFAYRIFEQMP RNLITWNSMIRGFAQNGR GI+I+IFE+MIKE
Sbjct: 396 IVESALVDLYAKCGCIDFAYRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKE 455

Query: 423 GIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEE 482
           GIKPDYISFIGVLFACSHTGLVDQGRHYF  MT EYGIKPGIEHYNCMVDLLGRAGLLEE
Sbjct: 456 GIKPDYISFIGVLFACSHTGLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEE 515

Query: 483 AENLIENADCRNDSALWQVLLGACTTCTNYATAERIAKKMMELEPQHHLSYVLLANVYRA 542
           AENLIENAD RNDS+LWQVLLGACTT TN  TAERIAKKMMELEPQHHLSYVLLANVYRA
Sbjct: 516 AENLIENADFRNDSSLWQVLLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRA 575

Query: 543 VGRWDDALKIRKLMKNRQVKKMPGQSWM 571
           VGRWDDAL IRK+MK+RQVKK+PGQSWM
Sbjct: 576 VGRWDDALTIRKVMKSRQVKKVPGQSWM 603

[Close]

BLAST of Lsi11G015230 vs. NCBI nr
Match: KAG7022900.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1066.2 bits (2756), Expect = 9.6e-308
Identity = 516/568 (90.85%), Postives = 538/568 (94.72%), Query Frame = 0


Query: 3   SGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRF 62
           SGLLHDA+H LNS+D FDS TNK ILYASLLQTCTKVASFSHG QIHAHV+KSGLE DRF
Sbjct: 36  SGLLHDAVHTLNSLDSFDSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRF 95

Query: 63  VGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDL 122
           VGNSLLSLYFKLGSD+ LTRRVFDGLFVKDVVSWTSMIT YVREGK GNAIELFWDMLDL
Sbjct: 96  VGNSLLSLYFKLGSDVRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDL 155

Query: 123 GIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSDA 182
           GIEPNGFTLSAVIKACSEIGNLVLGRCFHG+V+RHGF+SNHVIVSSLIDMYGRN+ SSDA
Sbjct: 156 GIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDA 215

Query: 183 RQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACGN 242
           RQLFDE+ EPDAICWTSVISA TRNDLYE+ALGFFYLM R Y L PDGFTFG+VLTAC N
Sbjct: 216 RQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACAN 275

Query: 243 LGRLRQGEEVHAKVIAYGLVGNVVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSAL 302
           LGRLRQGEEVHAKVIA+GL GNVVV SSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSAL
Sbjct: 276 LGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSAL 335

Query: 303 LGVYCQNGDFEKVVNLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV 362
           LGVYCQNGDFEKV+N+FR ME++DLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV
Sbjct: 336 LGVYCQNGDFEKVINIFRGMEKIDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV 395

Query: 363 IVESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKE 422
           IVESALVDLYAKCGCIDFAYRIFEQMP RNLITWNSMIRGFAQNGR GI+I+IFE+MIKE
Sbjct: 396 IVESALVDLYAKCGCIDFAYRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKE 455

Query: 423 GIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEE 482
           GIKPDYISFIGVLFACSHTGLVDQGRHYF  MT EYGIKPGIEHYNCMVDLLGRAGLLEE
Sbjct: 456 GIKPDYISFIGVLFACSHTGLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEE 515

Query: 483 AENLIENADCRNDSALWQVLLGACTTCTNYATAERIAKKMMELEPQHHLSYVLLANVYRA 542
           AENLIENAD RNDS+LWQVLLGACTT TN  TAERIAKKMMELEPQHHLSYVLLANVYRA
Sbjct: 516 AENLIENADFRNDSSLWQVLLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRA 575

Query: 543 VGRWDDALKIRKLMKNRQVKKMPGQSWM 571
           VGRWDDAL IRKLMK+RQVKK+PGQSWM
Sbjct: 576 VGRWDDALTIRKLMKSRQVKKVPGQSWM 603

[Close]

BLAST of Lsi11G015230 vs. NCBI nr
Match: XP_022930613.1 (pentatricopeptide repeat-containing protein At1g03540 [Cucurbita moschata])

HSP 1 Score: 1063.5 bits (2749), Expect = 6.2e-307
Identity = 515/568 (90.67%), Postives = 537/568 (94.54%), Query Frame = 0


Query: 3   SGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRF 62
           SGLL+DALH LNS+D FDS TNK ILYASLLQTCTKVASFSHG QIHAHV+KSGLE DRF
Sbjct: 36  SGLLYDALHTLNSLDSFDSTTNKSILYASLLQTCTKVASFSHGRQIHAHVLKSGLEADRF 95

Query: 63  VGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDL 122
           VGNSLLSLYFKLGSD+ LTRRVFDGLFVKDVVSWTSMIT YVREGK GNAIELFWDMLDL
Sbjct: 96  VGNSLLSLYFKLGSDVRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDL 155

Query: 123 GIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSDA 182
           GIEPNGFTLSAVIKACSEIGNLVLGRCFHG+V+RHGF+SNHVIVSSLIDMYGRN+ SSDA
Sbjct: 156 GIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDA 215

Query: 183 RQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACGN 242
           RQLFDE+ EPDAICWTSVISA TRNDLYE+ALGFFYLM R Y L PDGFTFG+VLTAC N
Sbjct: 216 RQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACAN 275

Query: 243 LGRLRQGEEVHAKVIAYGLVGNVVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSAL 302
           LGRLRQGEEVHAKVI +GL GNVVV SSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSAL
Sbjct: 276 LGRLRQGEEVHAKVIVHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSAL 335

Query: 303 LGVYCQNGDFEKVVNLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV 362
           LGVYCQNGDFEKV+N+FR ME++DLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV
Sbjct: 336 LGVYCQNGDFEKVINIFRGMEKIDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDV 395

Query: 363 IVESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKE 422
           IVESALVDLYAKCGCIDFAYRIFEQMP RNLITWNSMIRGFAQNGR GI+I+IFE+MIKE
Sbjct: 396 IVESALVDLYAKCGCIDFAYRIFEQMPTRNLITWNSMIRGFAQNGRSGISIEIFEEMIKE 455

Query: 423 GIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEE 482
           GIKPDYISFIGVLFACSHTGLVDQGRHYF  MT EYGIKPGIEHYNCMVDLLGRAGLLEE
Sbjct: 456 GIKPDYISFIGVLFACSHTGLVDQGRHYFVRMTEEYGIKPGIEHYNCMVDLLGRAGLLEE 515

Query: 483 AENLIENADCRNDSALWQVLLGACTTCTNYATAERIAKKMMELEPQHHLSYVLLANVYRA 542
           AENLIENAD RNDS+LWQVLLGACTT TN  TAERIAKKMMELEPQHHLSYVLLANVYRA
Sbjct: 516 AENLIENADFRNDSSLWQVLLGACTTSTNSGTAERIAKKMMELEPQHHLSYVLLANVYRA 575

Query: 543 VGRWDDALKIRKLMKNRQVKKMPGQSWM 571
           VGRWDDAL IRKLMK+RQVKK+PGQSWM
Sbjct: 576 VGRWDDALTIRKLMKSRQVKKVPGQSWM 603

[Close]

BLAST of Lsi11G015230 vs. TAIR 10
Match: AT1G03540.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 760.8 bits (1963), Expect = 8.1e-220
Identity = 366/570 (64.21%), Postives = 447/570 (78.42%), Query Frame = 0


Query: 2   KSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDR 61
           K G L +A+ ILNS      I   P LYASLLQTC KV SF HG Q HAHVVKSGLETDR
Sbjct: 38  KLGQLTEAIRILNSTH-SSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDR 97

Query: 62  FVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLD 121
            VGNSLLSLYFKLG  +  TRRVFDG FVKD +SWTSM++GYV   +   A+E+F +M+ 
Sbjct: 98  NVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVS 157

Query: 122 LGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSD 181
            G++ N FTLS+ +KACSE+G + LGRCFHGVVI HGF+ NH I S+L  +YG N    D
Sbjct: 158 FGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD 217

Query: 182 ARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACG 241
           AR++FDE+ EPD ICWT+V+SAF++NDLYEEALG FY M R   L PDG TFGTVLTACG
Sbjct: 218 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 277

Query: 242 NLGRLRQGEEVHAKVIAYGLVGNVVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSA 301
           NL RL+QG+E+H K+I  G+  NVVV SSL+DMYGKCG+V ++++VF+ MSK+NSVSWSA
Sbjct: 278 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 337

Query: 302 LLGVYCQNGDFEKVVNLFREMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRD 361
           LLG YCQNG+ EK + +FREMEE DLY FGTV++ACAGLAAV  GKE+H QYVR+G + +
Sbjct: 338 LLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN 397

Query: 362 VIVESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIK 421
           VIVESAL+DLY K GCID A R++ +M +RN+ITWN+M+   AQNGRG  A+  F DM+K
Sbjct: 398 VIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVK 457

Query: 422 EGIKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLE 481
           +GIKPDYISFI +L AC HTG+VD+GR+YF LM   YGIKPG EHY+CM+DLLGRAGL E
Sbjct: 458 KGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFE 517

Query: 482 EAENLIENADCRNDSALWQVLLGACTTCTNYA-TAERIAKKMMELEPQHHLSYVLLANVY 541
           EAENL+E A+CRND++LW VLLG C    + +  AERIAK+MMELEP++H+SYVLL+N+Y
Sbjct: 518 EAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMY 577

Query: 542 RAVGRWDDALKIRKLMKNRQVKKMPGQSWM 571
           +A+GR  DAL IRKLM  R V K  GQSW+
Sbjct: 578 KAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606

[Close]

BLAST of Lsi11G015230 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 402.9 bits (1034), Expect = 4.3e-112
Identity = 215/617 (34.85%), Postives = 350/617 (56.73%), Query Frame = 0


Query: 29  YASLLQTCTK-VASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDG 88
           +A LL +C K   S  +   +HA V+KSG   + F+ N L+  Y K GS L   R+VFD 
Sbjct: 22  FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGS-LEDGRQVFDK 81

Query: 89  LFVKDVVSWTSMITGYVREGKSGNAIELF----------WDMLDLGIEP----------- 148
           +  +++ +W S++TG  + G    A  LF          W+ +  G              
Sbjct: 82  MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 141

Query: 149 ----------NGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRN 208
                     N ++ ++V+ ACS + ++  G   H ++ +  F S+  I S+L+DMY + 
Sbjct: 142 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 201

Query: 209 YVSSDARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLPPDGFTFGTV 268
              +DA+++FDE+ + + + W S+I+ F +N    EAL  F +M  + R+ PD  T  +V
Sbjct: 202 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLES-RVEPDEVTLASV 261

Query: 269 LTACGNLGRLRQGEEVHAKVIAYGLVGN-VVVGSSLVDMYGKCGAVEKSQRVFD------ 328
           ++AC +L  ++ G+EVH +V+    + N +++ ++ VDMY KC  +++++ +FD      
Sbjct: 262 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 321

Query: 329 -------------------------RMSKRNSVSWSALLGVYCQNGDFEKVVNLF----R 388
                                    +M++RN VSW+AL+  Y QNG+ E+ ++LF    R
Sbjct: 322 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 381

Query: 389 EMEEVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWR-------DVIVESALVDLYA 448
           E      YSF  +++ACA LA +  G + H  +V K G++       D+ V ++L+D+Y 
Sbjct: 382 ESVCPTHYSFANILKACADLAELHLGMQAHV-HVLKHGFKFQSGEEDDIFVGNSLIDMYV 441

Query: 449 KCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKEGIKPDYISFIG 508
           KCGC++  Y +F +M  R+ ++WN+MI GFAQNG G  A+++F +M++ G KPD+I+ IG
Sbjct: 442 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 501

Query: 509 VLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADCR 568
           VL AC H G V++GRHYF+ MT ++G+ P  +HY CMVDLLGRAG LEEA+++IE    +
Sbjct: 502 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 561

Query: 569 NDSALWQVLLGACTTCTNYATAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALKIR 571
            DS +W  LL AC    N    + +A+K++E+EP +   YVLL+N+Y  +G+W+D + +R
Sbjct: 562 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 621

[Close]

BLAST of Lsi11G015230 vs. TAIR 10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 390.2 bits (1001), Expect = 2.9e-108
Identity = 203/549 (36.98%), Postives = 325/549 (59.20%), Query Frame = 0


Query: 27  ILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFD 86
           + +  +L T  KV S + G Q+H   +K GL+    V NSL+++Y KL       R VFD
Sbjct: 316 VTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL-RKFGFARTVFD 375

Query: 87  GLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEI-GNLV 146
            +  +D++SW S+I G  + G    A+ LF  +L  G++P+ +T+++V+KA S +   L 
Sbjct: 376 NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLS 435

Query: 147 LGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSDARQLFDELLEPDAICWTSVISAFT 206
           L +  H   I+    S+  + ++LID Y RN    +A  LF E    D + W ++++ +T
Sbjct: 436 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYT 495

Query: 207 RNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACGNLGRLRQGEEVHAKVIAYGLVGNV 266
           ++    + L  F LM +      D FT  TV   CG L  + QG++VHA  I  G   ++
Sbjct: 496 QSHDGHKTLKLFALMHKQGE-RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 555

Query: 267 VVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVVNLFREMEEV 326
            V S ++DMY KCG +  +Q  FD +   + V+W+ ++    +NG+ E+  ++F +M  +
Sbjct: 556 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 615

Query: 327 ----DLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDFA 386
               D ++  T+ +A + L A+ QG+++H   ++     D  V ++LVD+YAKCG ID A
Sbjct: 616 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 675

Query: 387 YRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKEGIKPDYISFIGVLFACSHT 446
           Y +F+++ + N+  WN+M+ G AQ+G G   +Q+F+ M   GIKPD ++FIGVL ACSH+
Sbjct: 676 YCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 735

Query: 447 GLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADCRNDSALWQV 506
           GLV +   +   M G+YGIKP IEHY+C+ D LGRAGL+++AENLIE+      +++++ 
Sbjct: 736 GLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRT 795

Query: 507 LLGACTTCTNYATAERIAKKMMELEPQHHLSYVLLANVYRAVGRWDDALKIRKLMKNRQV 566
           LL AC    +  T +R+A K++ELEP    +YVLL+N+Y A  +WD+    R +MK  +V
Sbjct: 796 LLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKV 855

Query: 567 KKMPGQSWM 571
           KK PG SW+
Sbjct: 856 KKDPGFSWI 861

[Close]

BLAST of Lsi11G015230 vs. TAIR 10
Match: AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 381.3 bits (978), Expect = 1.3e-105
Identity = 199/568 (35.04%), Postives = 322/568 (56.69%), Query Frame = 0


Query: 28  LYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDG 87
           +YAS+L++C  ++    G Q+HAH +KS    D  V  + L +Y K   ++   + +FD 
Sbjct: 283 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKC-DNMQDAQILFDN 342

Query: 88  LFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 147
               +  S+ +MITGY +E     A+ LF  ++  G+  +  +LS V +AC+ +  L  G
Sbjct: 343 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 402

Query: 148 RCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSDARQLFDELLEPDAICWTSVISAFTRN 207
              +G+ I+     +  + ++ IDMYG+    ++A ++FDE+   DA+ W ++I+A  +N
Sbjct: 403 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQN 462

Query: 208 DLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACGNLGRLRQGEEVHAKVIAYGLVGNVVV 267
               E L  F  M R+ R+ PD FTFG++L AC   G L  G E+H+ ++  G+  N  V
Sbjct: 463 GKGYETLFLFVSMLRS-RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSV 522

Query: 268 GSSLVDMYGKCGAVEKSQRVFDRMSKRNS--------------------VSWSALLGVYC 327
           G SL+DMY KCG +E+++++  R  +R +                    VSW++++  Y 
Sbjct: 523 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 582

Query: 328 QNGDFEKVVNLFREMEEV----DLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVI 387
                E    LF  M E+    D +++ TV+  CA LA+   GK++H Q ++K    DV 
Sbjct: 583 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVY 642

Query: 388 VESALVDLYAKCGCIDFAYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKEG 447
           + S LVD+Y+KCG +  +  +FE+   R+ +TWN+MI G+A +G+G  AIQ+FE MI E 
Sbjct: 643 ICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN 702

Query: 448 IKPDYISFIGVLFACSHTGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEEA 507
           IKP++++FI +L AC+H GL+D+G  YF +M  +YG+ P + HY+ MVD+LG++G ++ A
Sbjct: 703 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 762

Query: 508 ENLIENADCRNDSALWQVLLGACTT-CTNYATAERIAKKMMELEPQHHLSYVLLANVYRA 567
             LI       D  +W+ LLG CT    N   AE     ++ L+PQ   +Y LL+NVY  
Sbjct: 763 LELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYAD 822

Query: 568 VGRWDDALKIRKLMKNRQVKKMPGQSWM 571
            G W+    +R+ M+  ++KK PG SW+
Sbjct: 823 AGMWEKVSDLRRNMRGFKLKKEPGCSWV 847

[Close]

BLAST of Lsi11G015230 vs. TAIR 10
Match: AT3G02010.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 379.8 bits (974), Expect = 3.9e-105
Identity = 202/551 (36.66%), Postives = 311/551 (56.44%), Query Frame = 0


Query: 27  ILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRF--VGNSLLSLYFKLGSDLLLTRRV 86
           + + +LL  C      +   Q+HA  VK G +T+ F  V N LL  Y ++   L L   +
Sbjct: 148 VTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV-RRLDLACVL 207

Query: 87  FDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNL 146
           F+ +  KD V++ ++ITGY ++G    +I LF  M   G +P+ FT S V+KA   + + 
Sbjct: 208 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 267

Query: 147 VLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYVSSDARQLFDELLEPDAICWTSVISAF 206
            LG+  H + +  GF  +  + + ++D Y ++    + R LFDE+ E D + +  VIS++
Sbjct: 268 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 327

Query: 207 TRNDLYEEALGFFYLMQRAYRLPPDGFTFGTVLTACGNLGRLRQGEEVHAKVIAYGLVGN 266
           ++ D YE +L FF  MQ         F F T+L+   NL  L+ G ++H + +       
Sbjct: 328 SQADQYEASLHFFREMQ-CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 387

Query: 267 VVVGSSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVVNLFREME- 326
           + VG+SLVDMY KC   E+++ +F  + +R +VSW+AL+  Y Q G     + LF +M  
Sbjct: 388 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 447

Query: 327 ---EVDLYSFGTVIRACAGLAAVTQGKEVHCQYVRKGGWRDVIVESALVDLYAKCGCIDF 386
                D  +F TV++A A  A++  GK++H   +R G   +V   S LVD+YAKCG I  
Sbjct: 448 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 507

Query: 387 AYRIFEQMPVRNLITWNSMIRGFAQNGRGGIAIQIFEDMIKEGIKPDYISFIGVLFACSH 446
           A ++FE+MP RN ++WN++I   A NG G  AI  F  MI+ G++PD +S +GVL ACSH
Sbjct: 508 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 567

Query: 447 TGLVDQGRHYFALMTGEYGIKPGIEHYNCMVDLLGRAGLLEEAENLIENADCRNDSALWQ 506
            G V+QG  YF  M+  YGI P  +HY CM+DLLGR G   EAE L++      D  +W 
Sbjct: 568 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 627

Query: 507 VLLGACTTCTNYATAERIAKKMMELEP-QHHLSYVLLANVYRAVGRWDDALKIRKLMKNR 566
            +L AC    N + AER A+K+  +E  +   +YV ++N+Y A G W+    ++K M+ R
Sbjct: 628 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 687

Query: 567 QVKKMPGQSWM 571
            +KK+P  SW+
Sbjct: 688 GIKKVPAYSWV 696

The following BLAST results are available for this feature:

BLAST of Lsi11G015230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LR69	1.1e-218	64.21	Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX...	[more]
Q9SIT7	6.0e-111	34.85	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9SMZ2	4.0e-107	36.98	Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX...	[more]
Q9FWA6	1.9e-104	35.04	Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidop...	[more]
Q9S7F4	5.4e-104	36.66	Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis th...	[more]

BLAST of Lsi11G015230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3F1	0.0e+00	93.50	pentatricopeptide repeat-containing protein At1g03540 OS=Momordica charantia OX=...	[more]
A0A6J1EVR7	3.0e-307	90.67	pentatricopeptide repeat-containing protein At1g03540 OS=Cucurbita moschata OX=3...	[more]
A0A6J1JMC8	2.6e-306	89.96	pentatricopeptide repeat-containing protein At1g03540 OS=Cucurbita maxima OX=366...	[more]
A0A0A0K5P0	2.0e-295	86.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047230 PE=4 SV=1	[more]
A0A5A7SR37	1.7e-294	87.19	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Lsi11G015230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888158.1	0.0e+00	95.78	pentatricopeptide repeat-containing protein At1g03540 [Benincasa hispida]	[more]
XP_022147827.1	0.0e+00	93.50	pentatricopeptide repeat-containing protein At1g03540 [Momordica charantia]	[more]
KAG6589200.1	9.6e-308	90.85	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG7022900.1	9.6e-308	90.85	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022930613.1	6.2e-307	90.67	pentatricopeptide repeat-containing protein At1g03540 [Cucurbita moschata]	[more]

BLAST of Lsi11G015230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03540.1	8.1e-220	64.21	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT2G13600.1	4.3e-112	34.85	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G33170.1	2.9e-108	36.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G02330.1	1.3e-105	35.04	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G02010.1	3.9e-105	36.66	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 480..500
None	No IPR available	PANTHER	PTHR24015:SF328	OS06G0611200 PROTEIN	coord: 2..570
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 2..570
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..147 e-value: 1.0E-22 score: 82.9 coord: 325..431 e-value: 3.7E-23 score: 84.4 coord: 148..255 e-value: 2.1E-17 score: 65.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 432..565 e-value: 8.3E-16 score: 59.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 256..324 e-value: 3.1E-9 score: 38.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 294..552
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 392..438 e-value: 2.7E-9 score: 37.1 coord: 192..240 e-value: 3.6E-7 score: 30.3 coord: 91..138 e-value: 6.4E-13 score: 48.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 297..324 e-value: 1.5E-7 score: 31.2 coord: 532..560 e-value: 0.5 score: 10.7 coord: 269..295 e-value: 0.015 score: 15.5 coord: 466..488 e-value: 0.0055 score: 16.9 coord: 165..190 e-value: 1.1 score: 9.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 195..229 e-value: 1.1E-4 score: 20.1 coord: 94..127 e-value: 1.4E-5 score: 23.0 coord: 394..427 e-value: 4.7E-9 score: 33.9 coord: 297..326 e-value: 9.8E-7 score: 26.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 295..329 score: 11.125777
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 92..126 score: 12.353442
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 193..227 score: 8.95544
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 392..426 score: 13.219385

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G015230.1	Lsi11G015230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding