Lsi11G014940 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G014940
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	fasciclin-like arabinogalactan protein 21
Location	chr11: 23426291 .. 23427373 (+)
RNA-Seq Expression	Lsi11G014940
Synteny	Lsi11G014940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAGTGTTCATTCGAATGGTGGCATGCACCCATCGTCTTCTCCATCTCTGTAGTTTTAGCCTTCTTCGCCATCTCCACAGCTCTGCATTCCTCTACTTCCCACTCTGCAACTCCACCCAACAAAGCCATGGCCGACGAACTCTCTTTAAACGCATCAACAGCCTTAAGAAGAGCCGGTTTCAACACCATTGCCACACTCCTTCAGGTCTTCCCTGAACATTTCTTCTCCCCTCAAAACTCCACCATCTTCGCCATTAAAGATTCCGCCATCTCCAATATCTCCCTCCCTCCATGGCTCCTCAAGAATCTTGTCCAATACCACACTTCCCCTTCCAAGCTTTCCATGGCTGACCTGTTAAAGAAGCCTCAAGGGGTCTGTCTCTCGACCCTTTTGACGCCAAAGAAAATTGCTATCACTAAAATGGATTCCACTGCCAGATTGGTTGAGATCAATCATGTTCTTGTCACTGACCCTGATATTTTTCTTGGTGGGAATGTTTCCATTCATGGAGTTCTTGGGCCATTTTCTCCTCTGGATCCTCTTGATGCTAGTCAGGGATGGAGTTTCATTCAAGCGCCGTTCTGCGATTCAAACGCCACTGTAATTTCAGATCCTCTTGAAACCAAGAATGGGGTTGAGGTTGAAGTCGAATGGAGAAGAATCATACGGTGGCTTAGTGCAAATGGGTTTGTTTCTTATGCAATCGGATTGCAATCCGTTCTCGAAGGGATTCTTCAAGATTTCGAAGGATTGAGATCGATTACCGTCTTTGCGCCGCCGAATTTGGCTTCTGTAGCATCTCCATCGCCTGTTCTGAATCGAGCTGTGAGGCTTCATATTGTTCCTCAAATGGTTACATACAAATCCCTAGCTTCGTTGCCGACCAGAACTTCGCTCAAGACGCTCGTCTCCGGCCAAGATCTCGAGATCCTCGGAGGAGTTCGAGTTCCGAGAGGAATGGTGGTCGTTAACGGCGTGGAGATTGTCTCACCAGAGATCTTCCGATCTGCGAACTGTGTAATCCATGGAATTTCCCGGTCGCTTGAGATCGCCGGTTTACCTCATTCATCAAGATGA

mRNA sequence

ATGGCCAAGTGTTCATTCGAATGGTGGCATGCACCCATCGTCTTCTCCATCTCTGTAGTTTTAGCCTTCTTCGCCATCTCCACAGCTCTGCATTCCTCTACTTCCCACTCTGCAACTCCACCCAACAAAGCCATGGCCGACGAACTCTCTTTAAACGCATCAACAGCCTTAAGAAGAGCCGGTTTCAACACCATTGCCACACTCCTTCAGGTCTTCCCTGAACATTTCTTCTCCCCTCAAAACTCCACCATCTTCGCCATTAAAGATTCCGCCATCTCCAATATCTCCCTCCCTCCATGGCTCCTCAAGAATCTTGTCCAATACCACACTTCCCCTTCCAAGCTTTCCATGGCTGACCTGTTAAAGAAGCCTCAAGGGGTCTGTCTCTCGACCCTTTTGACGCCAAAGAAAATTGCTATCACTAAAATGGATTCCACTGCCAGATTGGTTGAGATCAATCATGTTCTTGTCACTGACCCTGATATTTTTCTTGGTGGGAATGTTTCCATTCATGGAGTTCTTGGGCCATTTTCTCCTCTGGATCCTCTTGATGCTAGTCAGGGATGGAGTTTCATTCAAGCGCCGTTCTGCGATTCAAACGCCACTGTAATTTCAGATCCTCTTGAAACCAAGAATGGGGTTGAGGTTGAAGTCGAATGGAGAAGAATCATACGGTGGCTTAGTGCAAATGGGTTTGTTTCTTATGCAATCGGATTGCAATCCGTTCTCGAAGGGATTCTTCAAGATTTCGAAGGATTGAGATCGATTACCGTCTTTGCGCCGCCGAATTTGGCTTCTGTAGCATCTCCATCGCCTGTTCTGAATCGAGCTGTGAGGCTTCATATTGTTCCTCAAATGGTTACATACAAATCCCTAGCTTCGTTGCCGACCAGAACTTCGCTCAAGACGCTCGTCTCCGGCCAAGATCTCGAGATCCTCGGAGGAGTTCGAGTTCCGAGAGGAATGGTGGTCGTTAACGGCGTGGAGATTGTCTCACCAGAGATCTTCCGATCTGCGAACTGTGTAATCCATGGAATTTCCCGGTCGCTTGAGATCGCCGGTTTACCTCATTCATCAAGATGA

Coding sequence (CDS)

ATGGCCAAGTGTTCATTCGAATGGTGGCATGCACCCATCGTCTTCTCCATCTCTGTAGTTTTAGCCTTCTTCGCCATCTCCACAGCTCTGCATTCCTCTACTTCCCACTCTGCAACTCCACCCAACAAAGCCATGGCCGACGAACTCTCTTTAAACGCATCAACAGCCTTAAGAAGAGCCGGTTTCAACACCATTGCCACACTCCTTCAGGTCTTCCCTGAACATTTCTTCTCCCCTCAAAACTCCACCATCTTCGCCATTAAAGATTCCGCCATCTCCAATATCTCCCTCCCTCCATGGCTCCTCAAGAATCTTGTCCAATACCACACTTCCCCTTCCAAGCTTTCCATGGCTGACCTGTTAAAGAAGCCTCAAGGGGTCTGTCTCTCGACCCTTTTGACGCCAAAGAAAATTGCTATCACTAAAATGGATTCCACTGCCAGATTGGTTGAGATCAATCATGTTCTTGTCACTGACCCTGATATTTTTCTTGGTGGGAATGTTTCCATTCATGGAGTTCTTGGGCCATTTTCTCCTCTGGATCCTCTTGATGCTAGTCAGGGATGGAGTTTCATTCAAGCGCCGTTCTGCGATTCAAACGCCACTGTAATTTCAGATCCTCTTGAAACCAAGAATGGGGTTGAGGTTGAAGTCGAATGGAGAAGAATCATACGGTGGCTTAGTGCAAATGGGTTTGTTTCTTATGCAATCGGATTGCAATCCGTTCTCGAAGGGATTCTTCAAGATTTCGAAGGATTGAGATCGATTACCGTCTTTGCGCCGCCGAATTTGGCTTCTGTAGCATCTCCATCGCCTGTTCTGAATCGAGCTGTGAGGCTTCATATTGTTCCTCAAATGGTTACATACAAATCCCTAGCTTCGTTGCCGACCAGAACTTCGCTCAAGACGCTCGTCTCCGGCCAAGATCTCGAGATCCTCGGAGGAGTTCGAGTTCCGAGAGGAATGGTGGTCGTTAACGGCGTGGAGATTGTCTCACCAGAGATCTTCCGATCTGCGAACTGTGTAATCCATGGAATTTCCCGGTCGCTTGAGATCGCCGGTTTACCTCATTCATCAAGATGA

Protein sequence

MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRAGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPWLLKNLVQYHTSPSKLSMADLLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQGWSFIQAPFCDSNATVISDPLETKNGVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSSR

Homology

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BLAST of Lsi11G014940 vs. ExPASy Swiss-Prot
Match: Q9FL53 (Fasciclin-like arabinogalactan protein 21 OS=Arabidopsis thaliana OX=3702 GN=FLA21 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.9e-71
Identity = 163/353 (46.18%), Postives = 215/353 (60.91%), Query Frame = 0


Query: 13  IVFSISVVLAFFAISTALHSSTSHSATPP--NKAMADELSLNASTALRRAGFNTIATLLQ 72
           + F +S+ LAF AIST L S      T P    + +  LSLNAS  LR++ F  IATLL 
Sbjct: 10  VYFILSIALAFMAISTTLRSPPDSEPTIPIAFSSSSPSLSLNASNTLRQSNFKAIATLLH 69

Query: 73  VFPEHFFSPQ-NSTIFAIKDSAISNI-SLPPWLLKNLVQYHTSPSKLSMADLLKKPQGVC 132
           + PE F S   N+T+FAI+D++  N  SL P  LK L+ YHT P  LSM DLLKKPQG C
Sbjct: 70  ISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLHYHTLPLMLSMDDLLKKPQGTC 129

Query: 133 LSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQG 192
           L TLL  K + I+ ++  +R  E+NHV +T PD+FLG ++ IHGV+GPFSPL P      
Sbjct: 130 LPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLGDSLVIHGVIGPFSPLQP----HS 189

Query: 193 WSFIQAPFCDSNATVISDPLETKNGVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQ 252
              I  P C S+ T   +       V V ++W RI++ LS+NGFV +AIGL SVL  I+ 
Sbjct: 190 DHLIHTPLCQSDTT---NKTSNNEEVPVSIDWTRIVQLLSSNGFVPFAIGLHSVLNRIVN 249

Query: 253 D---FEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRTSLKTLV 312
           D    + L  +T+ A PNL S++S SP L   VR HI+ Q +TYK  AS+  + ++KTL 
Sbjct: 250 DHNHHKNLTGVTILATPNLVSLSSASPFLYEVVRHHILVQRLTYKDFASMSDKATVKTLD 309

Query: 313 SGQDLEIL-GGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPH 358
             QDL I    V    G  +++GVEIV P++F S+N VIHGIS +LEI   PH
Sbjct: 310 PYQDLTITRRNVNSSGGDFMISGVEIVDPDMFSSSNFVIHGISHTLEI---PH 352

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BLAST of Lsi11G014940 vs. ExPASy TrEMBL
Match: A0A0A0K1P3 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G045490 PE=3 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 2.7e-184
Identity = 333/363 (91.74%), Postives = 345/363 (95.04%), Query Frame = 0


Query: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRA 60
           MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHS TPPNK+MAD+LSLNAS ALRRA
Sbjct: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSPTPPNKSMADDLSLNASRALRRA 60

Query: 61  GFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPWLLKNLVQYHTSPSKLSMADL 120
           GFNTIATLLQV PEHFFSPQNSTIFAIKDSAISN SLPPWLLKNLVQYHTSP KLSMADL
Sbjct: 61  GFNTIATLLQVSPEHFFSPQNSTIFAIKDSAISNTSLPPWLLKNLVQYHTSPVKLSMADL 120

Query: 121 LKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180
           LKKP+GVCL TLL PKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL
Sbjct: 121 LKKPRGVCLPTLLMPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180

Query: 181 DPLDASQGWSFIQAPFCDSNATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAI 240
           DPLD  QGWSFIQ+P+CD+NAT+ISDP ET N   GV VEVEWRRIIRWLSANGF+SYAI
Sbjct: 181 DPLDLRQGWSFIQSPYCDTNATMISDPFETNNGVVGVGVEVEWRRIIRWLSANGFISYAI 240

Query: 241 GLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT 300
           GLQ+VLEG+LQDFEGLRSITVFAPPNL+SVASPSPVLNRAVRLHIVPQMVTYKSLASLPT
Sbjct: 241 GLQTVLEGLLQDFEGLRSITVFAPPNLSSVASPSPVLNRAVRLHIVPQMVTYKSLASLPT 300

Query: 301 RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPH 360
           RTSLKTLVSGQD+EILGGVRVPRG V VNGVEIVSPEIFRS NCVIHGISRSLEIAGLPH
Sbjct: 301 RTSLKTLVSGQDIEILGGVRVPRGTVKVNGVEIVSPEIFRSENCVIHGISRSLEIAGLPH 360

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BLAST of Lsi11G014940 vs. ExPASy TrEMBL
Match: A0A5A7SLY0 (Fasciclin-like arabinogalactan protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003880 PE=3 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.4e-180
Identity = 326/363 (89.81%), Postives = 337/363 (92.84%), Query Frame = 0


Query: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRA 60
           MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSH+ATPPNK+M DELSLNAS ALRRA
Sbjct: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHTATPPNKSMTDELSLNASRALRRA 60

Query: 61  GFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPWLLKNLVQYHTSPSKLSMADL 120
           GFNTIATLLQV PEHFF PQNSTIFAIKDSAISN SLPPWLLKNLV+YHTSP KLSM DL
Sbjct: 61  GFNTIATLLQVSPEHFFFPQNSTIFAIKDSAISNTSLPPWLLKNLVKYHTSPFKLSMTDL 120

Query: 121 LKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180
           LKKPQG CL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL
Sbjct: 121 LKKPQGACLPTLLMPKKIAITRMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180

Query: 181 DPLDASQGWSFIQAPFCDSNATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAI 240
           DPLD  QGWS IQ+P+CDSN T+ISDP ET N   GV VEVEWRRIIRWLSANGFVSYAI
Sbjct: 181 DPLDVRQGWSLIQSPYCDSNGTIISDPFETNNGVVGVGVEVEWRRIIRWLSANGFVSYAI 240

Query: 241 GLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT 300
           GLQ+VLEG+LQDF GLRSITVFAPPNL SV SPSPVLNRAVRLHIVPQMVTYKSLASLP 
Sbjct: 241 GLQTVLEGLLQDFGGLRSITVFAPPNLVSVTSPSPVLNRAVRLHIVPQMVTYKSLASLPA 300

Query: 301 RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPH 360
           RTSLKTLVSGQD+EILGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLEIAG+PH
Sbjct: 301 RTSLKTLVSGQDIEILGGVRVPRGTVVVNGVEIVSPEIFRSENCVIHGISRSLEIAGIPH 360

[Close]

BLAST of Lsi11G014940 vs. ExPASy TrEMBL
Match: A0A1S3C0C6 (fasciclin-like arabinogalactan protein 21 OS=Cucumis melo OX=3656 GN=LOC103495560 PE=3 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.4e-180
Identity = 327/363 (90.08%), Postives = 337/363 (92.84%), Query Frame = 0


Query: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRA 60
           MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSH+ATPPNK+MADELSLNAS ALRRA
Sbjct: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHTATPPNKSMADELSLNASRALRRA 60

Query: 61  GFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPWLLKNLVQYHTSPSKLSMADL 120
           GFNTIATLLQV PEHFF PQNSTIFAIKDSAISN SLPPWLLKNLV+YHTSP KLSM DL
Sbjct: 61  GFNTIATLLQVSPEHFFFPQNSTIFAIKDSAISNTSLPPWLLKNLVKYHTSPFKLSMTDL 120

Query: 121 LKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180
           LKKPQG CL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL
Sbjct: 121 LKKPQGACLPTLLMPKKIAITRMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180

Query: 181 DPLDASQGWSFIQAPFCDSNATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAI 240
           DPLD  QGWS IQ+P+CDSN T+ISDP E  N   GV VEVEWRRIIRWLSANGFVSYAI
Sbjct: 181 DPLDVRQGWSLIQSPYCDSNGTIISDPFEPNNGVVGVGVEVEWRRIIRWLSANGFVSYAI 240

Query: 241 GLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT 300
           GLQ+VLEG+LQDF GLRSITVFAPPNL SV SPSPVLNRAVRLHIVPQMVTYKSLASLP 
Sbjct: 241 GLQTVLEGLLQDFGGLRSITVFAPPNLVSVTSPSPVLNRAVRLHIVPQMVTYKSLASLPA 300

Query: 301 RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPH 360
           RTSLKTLVSGQD+EILGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLEIAGLPH
Sbjct: 301 RTSLKTLVSGQDIEILGGVRVPRGTVVVNGVEIVSPEIFRSENCVIHGISRSLEIAGLPH 360

[Close]

BLAST of Lsi11G014940 vs. ExPASy TrEMBL
Match: A0A6J1I056 (fasciclin-like arabinogalactan protein 21 OS=Cucurbita maxima OX=3661 GN=LOC111468229 PE=3 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 1.3e-175
Identity = 323/361 (89.47%), Postives = 334/361 (92.52%), Query Frame = 0


Query: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHS-STSHSATPPNKAMADELSLNASTALRR 60
           M KCSFEWWHAPI F++SVVLAFFAISTAL+S +TSHSATPP KA+ADELS+NAS ALRR
Sbjct: 1   MGKCSFEWWHAPIYFAVSVVLAFFAISTALNSTATSHSATPPIKAVADELSINASRALRR 60

Query: 61  AGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPWLLKNLVQYHTSPSKLSMAD 120
           AGFNTIATLLQV PEHFFSPQNSTIFAIKDSAISN SLPPWLLKNLVQYHTSPSKLSMAD
Sbjct: 61  AGFNTIATLLQVSPEHFFSPQNSTIFAIKDSAISNTSLPPWLLKNLVQYHTSPSKLSMAD 120

Query: 121 LLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSP 180
           LLKKPQGVCL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSP
Sbjct: 121 LLKKPQGVCLPTLLAPKKIAITRMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSP 180

Query: 181 LDPLDASQGWSFIQAPFCDSNATVISDPLETKNGVEVEVEWRRIIRWLSANGFVSYAIGL 240
           LDPLD  QGWSFIQAPFCDS AT+ISD LE K G  VEVEWRRIIRWLSANGFVSYAIGL
Sbjct: 181 LDPLDVHQGWSFIQAPFCDSTATLISDSLENKKG--VEVEWRRIIRWLSANGFVSYAIGL 240

Query: 241 QSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRT 300
           QSVLEGILQDFEGLRSITVFAPPNLASVAS SPVL RAVRLHIVP+MVTYK LASLP RT
Sbjct: 241 QSVLEGILQDFEGLRSITVFAPPNLASVASSSPVLTRAVRLHIVPRMVTYKFLASLPART 300

Query: 301 SLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSS 360
           S KTLVSGQDL++LGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLE A LPH S
Sbjct: 301 SFKTLVSGQDLQVLGGVRVPRGTVVVNGVEIVSPEIFRSRNCVIHGISRSLETASLPHLS 359

[Close]

BLAST of Lsi11G014940 vs. ExPASy TrEMBL
Match: A0A6J1GJX5 (fasciclin-like arabinogalactan protein 21 OS=Cucurbita moschata OX=3662 GN=LOC111454951 PE=3 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 1.3e-175
Identity = 323/361 (89.47%), Postives = 334/361 (92.52%), Query Frame = 0


Query: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHS-STSHSATPPNKAMADELSLNASTALRR 60
           M KCSFEWWHAPI F++SVVLAFFAISTAL+S +TSHSATPP KA+ADELS+NAS ALRR
Sbjct: 1   MGKCSFEWWHAPIYFAVSVVLAFFAISTALNSTATSHSATPPIKAVADELSINASRALRR 60

Query: 61  AGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPWLLKNLVQYHTSPSKLSMAD 120
           AGFNTIATLLQV PEHFFSPQNSTIFAIKDSAISN SLPPWLLKNLVQYHTSPSKLSMAD
Sbjct: 61  AGFNTIATLLQVSPEHFFSPQNSTIFAIKDSAISNTSLPPWLLKNLVQYHTSPSKLSMAD 120

Query: 121 LLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSP 180
           LLKKPQGVCL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSP
Sbjct: 121 LLKKPQGVCLPTLLAPKKIAITRMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSP 180

Query: 181 LDPLDASQGWSFIQAPFCDSNATVISDPLETKNGVEVEVEWRRIIRWLSANGFVSYAIGL 240
           LDPLD  QGWSFIQAPFCDS AT+ISD LE K G  VEVEWRRIIRWLSANGFVSYAIGL
Sbjct: 181 LDPLDVHQGWSFIQAPFCDSTATLISDSLENKKG--VEVEWRRIIRWLSANGFVSYAIGL 240

Query: 241 QSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRT 300
           QSVLEGILQDFEGLRSITVFAPPNLASVAS SPVL RAVRLHIVP+MVTYK LASLP RT
Sbjct: 241 QSVLEGILQDFEGLRSITVFAPPNLASVASSSPVLTRAVRLHIVPRMVTYKFLASLPART 300

Query: 301 SLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSS 360
           S KTLVSGQDL++LGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLE A LPH S
Sbjct: 301 SFKTLVSGQDLQVLGGVRVPRGTVVVNGVEIVSPEIFRSRNCVIHGISRSLETASLPHLS 359

[Close]

BLAST of Lsi11G014940 vs. NCBI nr
Match: XP_038886823.1 (fasciclin-like arabinogalactan protein 21 [Benincasa hispida])

HSP 1 Score: 666.0 bits (1717), Expect = 1.8e-187
Identity = 341/361 (94.46%), Postives = 348/361 (96.40%), Query Frame = 0


Query: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRA 60
           MAKCSFEWWHAPIVFSISVVLAFFAI+TALHS+TSHSATPPNKAMADELSLNAS ALRRA
Sbjct: 1   MAKCSFEWWHAPIVFSISVVLAFFAITTALHSTTSHSATPPNKAMADELSLNASRALRRA 60

Query: 61  GFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPWLLKNLVQYHTSPSKLSMADL 120
           GFNTIATLLQV PEHFFSPQNSTIFAIKDSAISN SLPPWLLKNLVQYHTSPSKLSMADL
Sbjct: 61  GFNTIATLLQVSPEHFFSPQNSTIFAIKDSAISNTSLPPWLLKNLVQYHTSPSKLSMADL 120

Query: 121 LKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180
           LKKPQGVCL TLL PKKIAIT+M+STARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL
Sbjct: 121 LKKPQGVCLPTLLMPKKIAITRMNSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180

Query: 181 DPLDASQGWSFIQAPFCDSNATVISDPLETKNG-VEVEVEWRRIIRWLSANGFVSYAIGL 240
           DPLD  QGWSFIQAPFCDSNATVISDPLETKNG V VEVEWRRIIRWLSANGFVSYAIGL
Sbjct: 181 DPLDVRQGWSFIQAPFCDSNATVISDPLETKNGVVGVEVEWRRIIRWLSANGFVSYAIGL 240

Query: 241 QSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRT 300
           QSVLEGILQ+FEGL+SITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLP +T
Sbjct: 241 QSVLEGILQEFEGLKSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPAKT 300

Query: 301 SLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSS 360
           SLKTLVSGQDLEILGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLEI GLPHSS
Sbjct: 301 SLKTLVSGQDLEILGGVRVPRGTVVVNGVEIVSPEIFRSGNCVIHGISRSLEIVGLPHSS 360

[Close]

BLAST of Lsi11G014940 vs. NCBI nr
Match: XP_004144575.2 (fasciclin-like arabinogalactan protein 21 [Cucumis sativus])

HSP 1 Score: 654.4 bits (1687), Expect = 5.5e-184
Identity = 333/363 (91.74%), Postives = 345/363 (95.04%), Query Frame = 0


Query: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRA 60
           MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHS TPPNK+MAD+LSLNAS ALRRA
Sbjct: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSPTPPNKSMADDLSLNASRALRRA 60

Query: 61  GFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPWLLKNLVQYHTSPSKLSMADL 120
           GFNTIATLLQV PEHFFSPQNSTIFAIKDSAISN SLPPWLLKNLVQYHTSP KLSMADL
Sbjct: 61  GFNTIATLLQVSPEHFFSPQNSTIFAIKDSAISNTSLPPWLLKNLVQYHTSPVKLSMADL 120

Query: 121 LKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180
           LKKP+GVCL TLL PKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL
Sbjct: 121 LKKPRGVCLPTLLMPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180

Query: 181 DPLDASQGWSFIQAPFCDSNATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAI 240
           DPLD  QGWSFIQ+P+CD+NAT+ISDP ET N   GV VEVEWRRIIRWLSANGF+SYAI
Sbjct: 181 DPLDLRQGWSFIQSPYCDTNATMISDPFETNNGVVGVGVEVEWRRIIRWLSANGFISYAI 240

Query: 241 GLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT 300
           GLQ+VLEG+LQDFEGLRSITVFAPPNL+SVASPSPVLNRAVRLHIVPQMVTYKSLASLPT
Sbjct: 241 GLQTVLEGLLQDFEGLRSITVFAPPNLSSVASPSPVLNRAVRLHIVPQMVTYKSLASLPT 300

Query: 301 RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPH 360
           RTSLKTLVSGQD+EILGGVRVPRG V VNGVEIVSPEIFRS NCVIHGISRSLEIAGLPH
Sbjct: 301 RTSLKTLVSGQDIEILGGVRVPRGTVKVNGVEIVSPEIFRSENCVIHGISRSLEIAGLPH 360

[Close]

BLAST of Lsi11G014940 vs. NCBI nr
Match: KAA0031618.1 (fasciclin-like arabinogalactan protein 21 [Cucumis melo var. makuwa] >TYK07070.1 fasciclin-like arabinogalactan protein 21 [Cucumis melo var. makuwa])

HSP 1 Score: 642.1 bits (1655), Expect = 2.8e-180
Identity = 326/363 (89.81%), Postives = 337/363 (92.84%), Query Frame = 0


Query: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRA 60
           MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSH+ATPPNK+M DELSLNAS ALRRA
Sbjct: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHTATPPNKSMTDELSLNASRALRRA 60

Query: 61  GFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPWLLKNLVQYHTSPSKLSMADL 120
           GFNTIATLLQV PEHFF PQNSTIFAIKDSAISN SLPPWLLKNLV+YHTSP KLSM DL
Sbjct: 61  GFNTIATLLQVSPEHFFFPQNSTIFAIKDSAISNTSLPPWLLKNLVKYHTSPFKLSMTDL 120

Query: 121 LKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180
           LKKPQG CL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL
Sbjct: 121 LKKPQGACLPTLLMPKKIAITRMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180

Query: 181 DPLDASQGWSFIQAPFCDSNATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAI 240
           DPLD  QGWS IQ+P+CDSN T+ISDP ET N   GV VEVEWRRIIRWLSANGFVSYAI
Sbjct: 181 DPLDVRQGWSLIQSPYCDSNGTIISDPFETNNGVVGVGVEVEWRRIIRWLSANGFVSYAI 240

Query: 241 GLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT 300
           GLQ+VLEG+LQDF GLRSITVFAPPNL SV SPSPVLNRAVRLHIVPQMVTYKSLASLP 
Sbjct: 241 GLQTVLEGLLQDFGGLRSITVFAPPNLVSVTSPSPVLNRAVRLHIVPQMVTYKSLASLPA 300

Query: 301 RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPH 360
           RTSLKTLVSGQD+EILGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLEIAG+PH
Sbjct: 301 RTSLKTLVSGQDIEILGGVRVPRGTVVVNGVEIVSPEIFRSENCVIHGISRSLEIAGIPH 360

[Close]

BLAST of Lsi11G014940 vs. NCBI nr
Match: XP_008455382.1 (PREDICTED: fasciclin-like arabinogalactan protein 21 [Cucumis melo])

HSP 1 Score: 642.1 bits (1655), Expect = 2.8e-180
Identity = 327/363 (90.08%), Postives = 337/363 (92.84%), Query Frame = 0


Query: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHSATPPNKAMADELSLNASTALRRA 60
           MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSH+ATPPNK+MADELSLNAS ALRRA
Sbjct: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHSSTSHTATPPNKSMADELSLNASRALRRA 60

Query: 61  GFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPWLLKNLVQYHTSPSKLSMADL 120
           GFNTIATLLQV PEHFF PQNSTIFAIKDSAISN SLPPWLLKNLV+YHTSP KLSM DL
Sbjct: 61  GFNTIATLLQVSPEHFFFPQNSTIFAIKDSAISNTSLPPWLLKNLVKYHTSPFKLSMTDL 120

Query: 121 LKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180
           LKKPQG CL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL
Sbjct: 121 LKKPQGACLPTLLMPKKIAITRMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPL 180

Query: 181 DPLDASQGWSFIQAPFCDSNATVISDPLETKN---GVEVEVEWRRIIRWLSANGFVSYAI 240
           DPLD  QGWS IQ+P+CDSN T+ISDP E  N   GV VEVEWRRIIRWLSANGFVSYAI
Sbjct: 181 DPLDVRQGWSLIQSPYCDSNGTIISDPFEPNNGVVGVGVEVEWRRIIRWLSANGFVSYAI 240

Query: 241 GLQSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPT 300
           GLQ+VLEG+LQDF GLRSITVFAPPNL SV SPSPVLNRAVRLHIVPQMVTYKSLASLP 
Sbjct: 241 GLQTVLEGLLQDFGGLRSITVFAPPNLVSVTSPSPVLNRAVRLHIVPQMVTYKSLASLPA 300

Query: 301 RTSLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPH 360
           RTSLKTLVSGQD+EILGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLEIAGLPH
Sbjct: 301 RTSLKTLVSGQDIEILGGVRVPRGTVVVNGVEIVSPEIFRSENCVIHGISRSLEIAGLPH 360

[Close]

BLAST of Lsi11G014940 vs. NCBI nr
Match: XP_022952208.1 (fasciclin-like arabinogalactan protein 21 [Cucurbita moschata] >XP_022969148.1 fasciclin-like arabinogalactan protein 21 [Cucurbita maxima] >XP_023554529.1 fasciclin-like arabinogalactan protein 21 [Cucurbita pepo subsp. pepo] >KAG6572324.1 Fasciclin-like arabinogalactan protein 21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 625.5 bits (1612), Expect = 2.7e-175
Identity = 323/361 (89.47%), Postives = 334/361 (92.52%), Query Frame = 0


Query: 1   MAKCSFEWWHAPIVFSISVVLAFFAISTALHS-STSHSATPPNKAMADELSLNASTALRR 60
           M KCSFEWWHAPI F++SVVLAFFAISTAL+S +TSHSATPP KA+ADELS+NAS ALRR
Sbjct: 1   MGKCSFEWWHAPIYFAVSVVLAFFAISTALNSTATSHSATPPIKAVADELSINASRALRR 60

Query: 61  AGFNTIATLLQVFPEHFFSPQNSTIFAIKDSAISNISLPPWLLKNLVQYHTSPSKLSMAD 120
           AGFNTIATLLQV PEHFFSPQNSTIFAIKDSAISN SLPPWLLKNLVQYHTSPSKLSMAD
Sbjct: 61  AGFNTIATLLQVSPEHFFSPQNSTIFAIKDSAISNTSLPPWLLKNLVQYHTSPSKLSMAD 120

Query: 121 LLKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSP 180
           LLKKPQGVCL TLL PKKIAIT+MDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSP
Sbjct: 121 LLKKPQGVCLPTLLAPKKIAITRMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSP 180

Query: 181 LDPLDASQGWSFIQAPFCDSNATVISDPLETKNGVEVEVEWRRIIRWLSANGFVSYAIGL 240
           LDPLD  QGWSFIQAPFCDS AT+ISD LE K G  VEVEWRRIIRWLSANGFVSYAIGL
Sbjct: 181 LDPLDVHQGWSFIQAPFCDSTATLISDSLENKKG--VEVEWRRIIRWLSANGFVSYAIGL 240

Query: 241 QSVLEGILQDFEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRT 300
           QSVLEGILQDFEGLRSITVFAPPNLASVAS SPVL RAVRLHIVP+MVTYK LASLP RT
Sbjct: 241 QSVLEGILQDFEGLRSITVFAPPNLASVASSSPVLTRAVRLHIVPRMVTYKFLASLPART 300

Query: 301 SLKTLVSGQDLEILGGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPHSS 360
           S KTLVSGQDL++LGGVRVPRG VVVNGVEIVSPEIFRS NCVIHGISRSLE A LPH S
Sbjct: 301 SFKTLVSGQDLQVLGGVRVPRGTVVVNGVEIVSPEIFRSRNCVIHGISRSLETASLPHLS 359

[Close]

BLAST of Lsi11G014940 vs. TAIR 10
Match: AT5G06920.1 (FASCICLIN-like arabinogalactan protein 21 precursor )

HSP 1 Score: 270.4 bits (690), Expect = 2.1e-72
Identity = 163/353 (46.18%), Postives = 215/353 (60.91%), Query Frame = 0


Query: 13  IVFSISVVLAFFAISTALHSSTSHSATPP--NKAMADELSLNASTALRRAGFNTIATLLQ 72
           + F +S+ LAF AIST L S      T P    + +  LSLNAS  LR++ F  IATLL 
Sbjct: 10  VYFILSIALAFMAISTTLRSPPDSEPTIPIAFSSSSPSLSLNASNTLRQSNFKAIATLLH 69

Query: 73  VFPEHFFSPQ-NSTIFAIKDSAISNI-SLPPWLLKNLVQYHTSPSKLSMADLLKKPQGVC 132
           + PE F S   N+T+FAI+D++  N  SL P  LK L+ YHT P  LSM DLLKKPQG C
Sbjct: 70  ISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLHYHTLPLMLSMDDLLKKPQGTC 129

Query: 133 LSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGVLGPFSPLDPLDASQG 192
           L TLL  K + I+ ++  +R  E+NHV +T PD+FLG ++ IHGV+GPFSPL P      
Sbjct: 130 LPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLGDSLVIHGVIGPFSPLQP----HS 189

Query: 193 WSFIQAPFCDSNATVISDPLETKNGVEVEVEWRRIIRWLSANGFVSYAIGLQSVLEGILQ 252
              I  P C S+ T   +       V V ++W RI++ LS+NGFV +AIGL SVL  I+ 
Sbjct: 190 DHLIHTPLCQSDTT---NKTSNNEEVPVSIDWTRIVQLLSSNGFVPFAIGLHSVLNRIVN 249

Query: 253 D---FEGLRSITVFAPPNLASVASPSPVLNRAVRLHIVPQMVTYKSLASLPTRTSLKTLV 312
           D    + L  +T+ A PNL S++S SP L   VR HI+ Q +TYK  AS+  + ++KTL 
Sbjct: 250 DHNHHKNLTGVTILATPNLVSLSSASPFLYEVVRHHILVQRLTYKDFASMSDKATVKTLD 309

Query: 313 SGQDLEIL-GGVRVPRGMVVVNGVEIVSPEIFRSANCVIHGISRSLEIAGLPH 358
             QDL I    V    G  +++GVEIV P++F S+N VIHGIS +LEI   PH
Sbjct: 310 PYQDLTITRRNVNSSGGDFMISGVEIVDPDMFSSSNFVIHGISHTLEI---PH 352

[Close]

BLAST of Lsi11G014940 vs. TAIR 10
Match: AT1G30800.1 (Fasciclin-like arabinogalactan family protein )

HSP 1 Score: 44.3 bits (103), Expect = 2.4e-04
Identity = 40/120 (33.33%), Postives = 57/120 (47.50%), Query Frame = 0


Query: 66  ATLLQVFPEHFFSPQNSTIFAIKD-----------SAISNISLPPWLLKNLVQYHTSPSK 125
           A  L    + F  P ++TIF   D           S   N +  P  L   V YH  P +
Sbjct: 54  ADFLSAVDDQFGIPLSATIFIPSDFDSADISSSSSSTTGNNNANPRRLS--VAYHIVPQR 113

Query: 126 LSMADL-LKKPQGVCLSTLLTPKKIAITKMDSTARLVEINHVLVTDPDIFLGGNVSIHGV 174
           LS  DL L KP    L TLL    I +T  +++     ++ VLV++PD+FL  +++IHGV
Sbjct: 114 LSFTDLRLFKPLS-RLPTLLPGNTIVVT--NNSVPGYALDGVLVSEPDLFLSSSIAIHGV 168

The following BLAST results are available for this feature:

BLAST of Lsi11G014940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FL53	2.9e-71	46.18	Fasciclin-like arabinogalactan protein 21 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]

BLAST of Lsi11G014940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1P3	2.7e-184	91.74	FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G045490 PE=3 S...	[more]
A0A5A7SLY0	1.4e-180	89.81	Fasciclin-like arabinogalactan protein 21 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3C0C6	1.4e-180	90.08	fasciclin-like arabinogalactan protein 21 OS=Cucumis melo OX=3656 GN=LOC10349556...	[more]
A0A6J1I056	1.3e-175	89.47	fasciclin-like arabinogalactan protein 21 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1GJX5	1.3e-175	89.47	fasciclin-like arabinogalactan protein 21 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Lsi11G014940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886823.1	1.8e-187	94.46	fasciclin-like arabinogalactan protein 21 [Benincasa hispida]	[more]
XP_004144575.2	5.5e-184	91.74	fasciclin-like arabinogalactan protein 21 [Cucumis sativus]	[more]
KAA0031618.1	2.8e-180	89.81	fasciclin-like arabinogalactan protein 21 [Cucumis melo var. makuwa] >TYK07070.1...	[more]
XP_008455382.1	2.8e-180	90.08	PREDICTED: fasciclin-like arabinogalactan protein 21 [Cucumis melo]	[more]
XP_022952208.1	2.7e-175	89.47	fasciclin-like arabinogalactan protein 21 [Cucurbita moschata] >XP_022969148.1 f...	[more]

BLAST of Lsi11G014940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06920.1	2.1e-72	46.18	FASCICLIN-like arabinogalactan protein 21 precursor	[more]
AT1G30800.1	2.4e-04	33.33	Fasciclin-like arabinogalactan family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 83..180 e-value: 4.5E-8 score: 42.8 coord: 257..353 e-value: 2.2E-10 score: 50.5
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 245..350 e-value: 3.5E-8 score: 33.7
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 220..350 score: 11.024975
IPR036378	FAS1 domain superfamily	GENE3D	2.30.180.10	FAS1 domain	coord: 26..179 e-value: 2.6E-8 score: 36.2 coord: 227..351 e-value: 6.2E-9 score: 38.2
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 50..179
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 222..349
None	No IPR available	PANTHER	PTHR33985:SF19	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 21	coord: 6..351
None	No IPR available	PANTHER	PTHR33985	OS02G0491300 PROTEIN-RELATED	coord: 6..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G014940.1	Lsi11G014940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane