Lsi11G014570 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi11G014570
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein DETOXIFICATION
Locationchr11: 23156864 .. 23157073 (+)
RNA-Seq ExpressionLsi11G014570
SyntenyLsi11G014570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCTGTTTCTGAAGACGATGTTCGTCAAGCGCTGCTGCAGCCGGCAGCGGCGGCATTGCTGTCGTCTCAGTCACTAATGTCGAACCACCACGGCGGTAGCGACGAGCTCGAGAGGATTTTATCTGACACAGAGATGTCGGCGATGGAACGTTACAGTCGAGCCAGTTGGATCGAGATTAAGCTTCTGTTTTACTTNGGATCGTAA

mRNA sequence

ATGGGATCTGTTTCTGAAGACGATGTTCGTCAAGCGCTGCTGCAGCCGGCAGCGGCGGCATTGCTGTCGTCTCAGTCACTAATGTCGAACCACCACGGCGGTAGCGACGAGCTCGAGAGGATTTTATCTGACACAGAGATGTCGGCGATGGAACGTTACAGTCGAGCCAGTTGGATCGAGATTAAGCTTCTGTTTTACTTNGGATCGTAA

Coding sequence (CDS)

ATGGGATCTGTTTCTGAAGACGATGTTCGTCAAGCGCTGCTGCAGCCGGCAGCGGCGGCATTGCTGTCGTCTCAGTCACTAATGTCGAACCACCACGGCGGTAGCGACGAGCTCGAGAGGATTTTATCTGACACAGAGATGTCGGCGATGGAACGTTACAGTCGAGCCAGTTGGATCGAGATTAAGCTTCTGTTTTACTTNGGATCGTAA

Protein sequence

MGSVSEDDVRQALLQPAAAALLSSQSLMSNHHGGSDELERILSDTEMSAMERYSRASWIEIKLLFYXGS
Homology
[Close]
BLAST of Lsi11G014570 vs. ExPASy TrEMBL
Match: A0A5A7TG60 (Protein DETOXIFICATION OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004190 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-23
Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 1  MGSVSEDDVRQALLQPAAAALLSSQSLMSNHHGGSDELERILSDTEMSAMERYSRASWIE 60
          MGSV EDDVRQALLQPA+AALLSS SL SNHHGG++ELERILSDTEMSAMERYSRA+WIE
Sbjct: 1  MGSVFEDDVRQALLQPASAALLSSHSLCSNHHGGNEELERILSDTEMSAMERYSRATWIE 60

Query: 61 IKLLFY 67
          IKLLFY
Sbjct: 61 IKLLFY 66

[Close]
BLAST of Lsi11G014570 vs. ExPASy TrEMBL
Match: A0A1S3C1M1 (Protein DETOXIFICATION OS=Cucumis melo OX=3656 GN=LOC103495591 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-23
Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 1  MGSVSEDDVRQALLQPAAAALLSSQSLMSNHHGGSDELERILSDTEMSAMERYSRASWIE 60
          MGSV EDDVRQALLQPA+AALLSS SL SNHHGG++ELERILSDTEMSAMERYSRA+WIE
Sbjct: 1  MGSVFEDDVRQALLQPASAALLSSHSLCSNHHGGNEELERILSDTEMSAMERYSRATWIE 60

Query: 61 IKLLFY 67
          IKLLFY
Sbjct: 61 IKLLFY 66

[Close]
BLAST of Lsi11G014570 vs. ExPASy TrEMBL
Match: A0A0A0K262 (Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_7G044190 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.6e-21
Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 1  MGSVSEDDVRQALLQPAAAALLSSQSLMSNHHGGSDELERILSDTEMSAMERYSRASWIE 60
          MGS+ EDDVRQALLQPA+AALLSS SL SNHHGG++ELERILSDTE+S M+RY RA+WIE
Sbjct: 1  MGSIFEDDVRQALLQPASAALLSSHSLCSNHHGGNEELERILSDTEISVMDRYRRATWIE 60

Query: 61 IKLLFY 67
          IKLLFY
Sbjct: 61 IKLLFY 66

[Close]
BLAST of Lsi11G014570 vs. ExPASy TrEMBL
Match: A0A6J1JN69 (Protein DETOXIFICATION OS=Cucurbita maxima OX=3661 GN=LOC111485991 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.7e-19
Identity = 54/66 (81.82%), Postives = 57/66 (86.36%), Query Frame = 0 

Query: 1  MGSVSEDDVRQALLQPAAAALLSSQSLMSNHHGGSDELERILSDTEMSAMERYSRASWIE 60
          M S  EDDVRQALLQPAAAALLSSQSL SN H GSDELERILSDTEM  ++RYS A+WIE
Sbjct: 1  MVSAYEDDVRQALLQPAAAALLSSQSLCSNKHEGSDELERILSDTEMPVVQRYSHATWIE 60

Query: 61 IKLLFY 67
          IKLLFY
Sbjct: 61 IKLLFY 66

[Close]
BLAST of Lsi11G014570 vs. ExPASy TrEMBL
Match: A0A6J1GLY1 (Protein DETOXIFICATION OS=Cucurbita moschata OX=3662 GN=LOC111455182 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18
Identity = 53/66 (80.30%), Postives = 58/66 (87.88%), Query Frame = 0 

Query: 1  MGSVSEDDVRQALLQPAAAALLSSQSLMSNHHGGSDELERILSDTEMSAMERYSRASWIE 60
          M S+S+DDVRQALLQPAAAALLSSQSL SN H  SDELERILSDTEM  +ERY+RA+WIE
Sbjct: 1  MESISDDDVRQALLQPAAAALLSSQSLCSNKHEVSDELERILSDTEMPVVERYTRATWIE 60

Query: 61 IKLLFY 67
          IKLL Y
Sbjct: 61 IKLLLY 66

[Close]
BLAST of Lsi11G014570 vs. NCBI nr
Match: XP_038888771.1 (protein DETOXIFICATION 40-like [Benincasa hispida])

HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24
Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 1  MGSVSEDDVRQALLQPAAAALLSSQSLMSNHHGGSDELERILSDTEMSAMERYSRASWIE 60
          MGSVSEDDVRQALLQPA+AALLSSQSL SNHHGGS+ELERILSDTEMSAMERYSRA+WIE
Sbjct: 1  MGSVSEDDVRQALLQPASAALLSSQSLCSNHHGGSEELERILSDTEMSAMERYSRATWIE 60

Query: 61 IKLLFY 67
          IKLLFY
Sbjct: 61 IKLLFY 66

[Close]
BLAST of Lsi11G014570 vs. NCBI nr
Match: KAA0040249.1 (protein DETOXIFICATION 40-like [Cucumis melo var. makuwa] >TYK07100.1 protein DETOXIFICATION 40-like [Cucumis melo var. makuwa])

HSP 1 Score: 116.7 bits (291), Expect = 7.9e-23
Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 1  MGSVSEDDVRQALLQPAAAALLSSQSLMSNHHGGSDELERILSDTEMSAMERYSRASWIE 60
          MGSV EDDVRQALLQPA+AALLSS SL SNHHGG++ELERILSDTEMSAMERYSRA+WIE
Sbjct: 1  MGSVFEDDVRQALLQPASAALLSSHSLCSNHHGGNEELERILSDTEMSAMERYSRATWIE 60

Query: 61 IKLLFY 67
          IKLLFY
Sbjct: 61 IKLLFY 66

[Close]
BLAST of Lsi11G014570 vs. NCBI nr
Match: XP_008455432.1 (PREDICTED: protein DETOXIFICATION 40-like [Cucumis melo])

HSP 1 Score: 116.7 bits (291), Expect = 7.9e-23
Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 1  MGSVSEDDVRQALLQPAAAALLSSQSLMSNHHGGSDELERILSDTEMSAMERYSRASWIE 60
          MGSV EDDVRQALLQPA+AALLSS SL SNHHGG++ELERILSDTEMSAMERYSRA+WIE
Sbjct: 1  MGSVFEDDVRQALLQPASAALLSSHSLCSNHHGGNEELERILSDTEMSAMERYSRATWIE 60

Query: 61 IKLLFY 67
          IKLLFY
Sbjct: 61 IKLLFY 66

[Close]
BLAST of Lsi11G014570 vs. NCBI nr
Match: XP_004144494.1 (protein DETOXIFICATION 40 [Cucumis sativus] >KGN43528.1 hypothetical protein Csa_020430 [Cucumis sativus])

HSP 1 Score: 110.2 bits (274), Expect = 7.4e-21
Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 1  MGSVSEDDVRQALLQPAAAALLSSQSLMSNHHGGSDELERILSDTEMSAMERYSRASWIE 60
          MGS+ EDDVRQALLQPA+AALLSS SL SNHHGG++ELERILSDTE+S M+RY RA+WIE
Sbjct: 1  MGSIFEDDVRQALLQPASAALLSSHSLCSNHHGGNEELERILSDTEISVMDRYRRATWIE 60

Query: 61 IKLLFY 67
          IKLLFY
Sbjct: 61 IKLLFY 66

[Close]
BLAST of Lsi11G014570 vs. NCBI nr
Match: XP_023531518.1 (protein DETOXIFICATION 40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 105.5 bits (262), Expect = 1.8e-19
Identity = 54/66 (81.82%), Postives = 59/66 (89.39%), Query Frame = 0 

Query: 1  MGSVSEDDVRQALLQPAAAALLSSQSLMSNHHGGSDELERILSDTEMSAMERYSRASWIE 60
          MGS  EDD+RQALLQPAAAALLSSQSL SN H GSDELERILSDTEM  ++RYS+A+WIE
Sbjct: 1  MGSAYEDDLRQALLQPAAAALLSSQSLCSNKHEGSDELERILSDTEMPVVQRYSQATWIE 60

Query: 61 IKLLFY 67
          IKLLFY
Sbjct: 61 IKLLFY 66

The following BLAST results are available for this feature:
BLAST of Lsi11G014570 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi11G014570 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TG603.8e-2389.39Protein DETOXIFICATION OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
A0A1S3C1M13.8e-2389.39Protein DETOXIFICATION OS=Cucumis melo OX=3656 GN=LOC103495591 PE=3 SV=1[more]
A0A0A0K2623.6e-2181.82Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_7G044190 PE=3 SV=1[more]
A0A6J1JN695.7e-1981.82Protein DETOXIFICATION OS=Cucurbita maxima OX=3661 GN=LOC111485991 PE=3 SV=1[more]
A0A6J1GLY11.3e-1880.30Protein DETOXIFICATION OS=Cucurbita moschata OX=3662 GN=LOC111455182 PE=3 SV=1[more]
BLAST of Lsi11G014570 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038888771.11.9e-2493.94protein DETOXIFICATION 40-like [Benincasa hispida][more]
KAA0040249.17.9e-2389.39protein DETOXIFICATION 40-like [Cucumis melo var. makuwa] >TYK07100.1 protein DE... [more]
XP_008455432.17.9e-2389.39PREDICTED: protein DETOXIFICATION 40-like [Cucumis melo][more]
XP_004144494.17.4e-2181.82protein DETOXIFICATION 40 [Cucumis sativus] >KGN43528.1 hypothetical protein Csa... [more]
XP_023531518.11.8e-1981.82protein DETOXIFICATION 40-like [Cucurbita pepo subsp. pepo][more]
BLAST of Lsi11G014570 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G014570.1Lsi11G014570.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0015297 antiporter activity
molecular_function GO:0042910 xenobiotic transmembrane transporter activity