Lsi11G011820 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G011820
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Peptidyl-prolyl cis-trans isomerase
Location	chr11: 20307474 .. 20307992 (+)
RNA-Seq Expression	Lsi11G011820
Synteny	Lsi11G011820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAACCCTAAAGTATTCTTCGACATGACAATCGGCGGCCAACCGGCAGGCCGGATCGTGATGGAGCTGTACGCCGATGTCACTCCCCGCACGGCCGAGAACTTCCGTGCACTGTGTACTGGTGAGAAAGGAGTCGGCAGAAGCGGCAAACCCCTTCATTACAAGGGATCTTCGTTCCACCGTGTGATCCCTAATTTCATGTGCCAAGGAGGCGATTTCACCGCCGGAAATGGTACAGGAGGTGAATCGATCTATGGCGCCAAGTTCGCCGACGAGAACTTCATCAAGAAGCACACCGGCCCTGGTATTTTATCCATGGCGAATGCTGGACCTGGAACCAACGGATCTCAGTTCTTCATTTGCACCGCTAAGACCGAGTGGCTCGATGGAAAGCACGTCGTGTTCGGTCAAGTCGTTGAAGGCATGGATGTGGTAAAGGCCGTTGAGAAAGTCGGATCGAGCTCTGGAAGGACCTCAAGACCGGTTGTCGTTGCTGATTGTGGCCAGCTCTCTTAG

mRNA sequence

ATGCCAAACCCTAAAGTATTCTTCGACATGACAATCGGCGGCCAACCGGCAGGCCGGATCGTGATGGAGCTGTACGCCGATGTCACTCCCCGCACGGCCGAGAACTTCCGTGCACTGTGTACTGGTGAGAAAGGAGTCGGCAGAAGCGGCAAACCCCTTCATTACAAGGGATCTTCGTTCCACCGTGTGATCCCTAATTTCATGTGCCAAGGAGGCGATTTCACCGCCGGAAATGGTACAGGAGGTGAATCGATCTATGGCGCCAAGTTCGCCGACGAGAACTTCATCAAGAAGCACACCGGCCCTGGTATTTTATCCATGGCGAATGCTGGACCTGGAACCAACGGATCTCAGTTCTTCATTTGCACCGCTAAGACCGAGTGGCTCGATGGAAAGCACGTCGTGTTCGGTCAAGTCGTTGAAGGCATGGATGTGGTAAAGGCCGTTGAGAAAGTCGGATCGAGCTCTGGAAGGACCTCAAGACCGGTTGTCGTTGCTGATTGTGGCCAGCTCTCTTAG

Coding sequence (CDS)

ATGCCAAACCCTAAAGTATTCTTCGACATGACAATCGGCGGCCAACCGGCAGGCCGGATCGTGATGGAGCTGTACGCCGATGTCACTCCCCGCACGGCCGAGAACTTCCGTGCACTGTGTACTGGTGAGAAAGGAGTCGGCAGAAGCGGCAAACCCCTTCATTACAAGGGATCTTCGTTCCACCGTGTGATCCCTAATTTCATGTGCCAAGGAGGCGATTTCACCGCCGGAAATGGTACAGGAGGTGAATCGATCTATGGCGCCAAGTTCGCCGACGAGAACTTCATCAAGAAGCACACCGGCCCTGGTATTTTATCCATGGCGAATGCTGGACCTGGAACCAACGGATCTCAGTTCTTCATTTGCACCGCTAAGACCGAGTGGCTCGATGGAAAGCACGTCGTGTTCGGTCAAGTCGTTGAAGGCATGGATGTGGTAAAGGCCGTTGAGAAAGTCGGATCGAGCTCTGGAAGGACCTCAAGACCGGTTGTCGTTGCTGATTGTGGCCAGCTCTCTTAG

Protein sequence

MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS

Homology

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BLAST of Lsi11G011820 vs. ExPASy Swiss-Prot
Match: Q8W171 (Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max OX=3847 GN=Cyp1 PE=2 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 3.2e-92
Identity = 158/172 (91.86%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
           MPNPKVFFDMTIGGQ AGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMTIGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

Query: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120
           HRVIP+FMCQGGDFTAGNGTGGESIYGAKFADENF+KKHTGPGILSMANAGPGTNGSQFF
Sbjct: 61  HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           ICT KTEWLDGKHVVFGQV+EG++VVK +EKVGS SGRTS+PVV+A+CGQ S
Sbjct: 121 ICTEKTEWLDGKHVVFGQVIEGLNVVKDIEKVGSGSGRTSKPVVIANCGQPS 172

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BLAST of Lsi11G011820 vs. ExPASy Swiss-Prot
Match: Q39613 (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus OX=4058 GN=PCKR1 PE=1 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 9.4e-92
Identity = 158/172 (91.86%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
           MPNP+VFFDM++GGQPAGRIVMEL+AD TPRTAENFRALCTGEKG GRSGKPLHYK SSF
Sbjct: 1   MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSF 60

Query: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGP TNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFF 120

Query: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           ICTAKTEWLDGKHVVFGQVVEGMDVVKA+EKVGSSSGRT++ VVV DCGQLS
Sbjct: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172

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BLAST of Lsi11G011820 vs. ExPASy Swiss-Prot
Match: O49886 (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus OX=3873 PE=2 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 9.7e-89
Identity = 152/172 (88.37%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
           M NPKVFFDM I G PAGRIVMELYAD TPRTAENFRALCTGEKGVGRSGKPLHYKGS+F
Sbjct: 1   MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTF 60

Query: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120
           HRVIPNFMCQGGDFTAGNGTG ESIYGAKFADENFIK+HTGPGILSMANAG GTNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFF 120

Query: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           ICT KTEWLDGKHVVFG+V+EGM+VV+ +EKVGS SG+TSRPV +ADCGQLS
Sbjct: 121 ICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172

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BLAST of Lsi11G011820 vs. ExPASy Swiss-Prot
Match: P21568 (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum OX=4081 GN=CYP PE=2 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 1.7e-88
Identity = 150/171 (87.72%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
           M NPKVFFD+TIGG PAGR+VMEL+AD TP+TAENFRALCTGEKGVG+ GKPLHYKGS+F
Sbjct: 1   MANPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTF 60

Query: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYGAKF DENF+KKHTGPGILSMANAGPGTNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQL 172
           ICTAKTEWL+GKHVVFGQVVEGMDV+K  E VGSSSGR S+PVV+ADCGQL
Sbjct: 121 ICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171

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BLAST of Lsi11G011820 vs. ExPASy Swiss-Prot
Match: Q9SKQ0 (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana OX=3702 GN=CYP19-2 PE=2 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 5.9e-86
Identity = 145/170 (85.29%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 3   NPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 62
           +PKVFFDMTIGG PAG+IVMELY D TP+TAENFRALCTGEKGVGRSGKPLH+KGSSFHR
Sbjct: 4   HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHR 63

Query: 63  VIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 122
           VIPNFMCQGGDFT GNGTGGESIYGAKF DENF +KHTGPGILSMANAG  TNGSQFFIC
Sbjct: 64  VIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFIC 123

Query: 123 TAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           T KT+WLDGKHVVFGQVVEG+DVVKA+EK+GSSSG+ ++PVV+ADCG++S
Sbjct: 124 TVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173

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BLAST of Lsi11G011820 vs. ExPASy TrEMBL
Match: A0A5A7U8B9 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00830 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 4.7e-94
Identity = 167/172 (97.09%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
           MPNPKVFFDM+IGG PAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMSIGGAPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

Query: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120
           HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           ICTAKT+WLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTS+PVV+ADCGQLS
Sbjct: 121 ICTAKTDWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSKPVVIADCGQLS 172

[Close]

BLAST of Lsi11G011820 vs. ExPASy TrEMBL
Match: A0A1S3BJB0 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103490307 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 4.7e-94
Identity = 167/172 (97.09%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
           MPNPKVFFDM+IGG PAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMSIGGAPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

Query: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120
           HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           ICTAKT+WLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTS+PVV+ADCGQLS
Sbjct: 121 ICTAKTDWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSKPVVIADCGQLS 172

[Close]

BLAST of Lsi11G011820 vs. ExPASy TrEMBL
Match: G8XQW2 (Peptidyl-prolyl cis-trans isomerase OS=Gossypium hirsutum OX=3635 GN=LOC107916701 PE=2 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 6.7e-93
Identity = 165/170 (97.06%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 3   NPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 62
           NPKVFFDMTIGGQPAGRIVMEL+AD TPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR
Sbjct: 4   NPKVFFDMTIGGQPAGRIVMELFADCTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 63

Query: 63  VIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 122
           VIPNFMCQGGDFTAGNGTGGESIYG+KFADENFIKKHTGPGILSMANAGPGTNGSQFFIC
Sbjct: 64  VIPNFMCQGGDFTAGNGTGGESIYGSKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 123

Query: 123 TAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           TAKTEWLDGKHVVFGQVVEGMDVVKA+EKVGSSSGRTS+PVVVADCGQLS
Sbjct: 124 TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSKPVVVADCGQLS 173

[Close]

BLAST of Lsi11G011820 vs. ExPASy TrEMBL
Match: A0A5D2HN69 (Peptidyl-prolyl cis-trans isomerase OS=Gossypium darwinii OX=34276 GN=ES288_A01G189100v1 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 6.7e-93
Identity = 165/170 (97.06%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 3   NPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 62
           NPKVFFDMTIGGQPAGRIVMEL+AD TPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR
Sbjct: 4   NPKVFFDMTIGGQPAGRIVMELFADCTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 63

Query: 63  VIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 122
           VIPNFMCQGGDFTAGNGTGGESIYG+KFADENFIKKHTGPGILSMANAGPGTNGSQFFIC
Sbjct: 64  VIPNFMCQGGDFTAGNGTGGESIYGSKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 123

Query: 123 TAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           TAKTEWLDGKHVVFGQVVEGMDVVKA+EKVGSSSGRTS+PVVVADCGQLS
Sbjct: 124 TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSKPVVVADCGQLS 173

[Close]

BLAST of Lsi11G011820 vs. ExPASy TrEMBL
Match: A0A2P5YKR2 (Peptidyl-prolyl cis-trans isomerase OS=Gossypium barbadense OX=3634 GN=ES319_A01G173700v1 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 6.7e-93
Identity = 165/170 (97.06%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 3   NPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 62
           NPKVFFDMTIGGQPAGRIVMEL+AD TPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR
Sbjct: 4   NPKVFFDMTIGGQPAGRIVMELFADCTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 63

Query: 63  VIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 122
           VIPNFMCQGGDFTAGNGTGGESIYG+KFADENFIKKHTGPGILSMANAGPGTNGSQFFIC
Sbjct: 64  VIPNFMCQGGDFTAGNGTGGESIYGSKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 123

Query: 123 TAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           TAKTEWLDGKHVVFGQVVEGMDVVKA+EKVGSSSGRTS+PVVVADCGQLS
Sbjct: 124 TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSKPVVVADCGQLS 173

[Close]

BLAST of Lsi11G011820 vs. NCBI nr
Match: XP_008447986.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase [Cucumis melo] >KAA0049729.1 peptidyl-prolyl cis-trans isomerase [Cucumis melo var. makuwa] >TYK12146.1 peptidyl-prolyl cis-trans isomerase [Cucumis melo var. makuwa])

HSP 1 Score: 353.6 bits (906), Expect = 9.6e-94
Identity = 167/172 (97.09%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
           MPNPKVFFDM+IGG PAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMSIGGAPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

Query: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120
           HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           ICTAKT+WLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTS+PVV+ADCGQLS
Sbjct: 121 ICTAKTDWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSKPVVIADCGQLS 172

[Close]

BLAST of Lsi11G011820 vs. NCBI nr
Match: XP_038888644.1 (peptidyl-prolyl cis-trans isomerase [Benincasa hispida])

HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92
Identity = 164/172 (95.35%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
           MPNP+VFFDMT+GGQPAGRIVMEL+ADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF
Sbjct: 1   MPNPRVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

Query: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120
           HRVIP+FMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF
Sbjct: 61  HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           ICTAKTEWLDGKHVVFGQV+EGMDVVKAVEKVGSSSGRTS+ VV+ADCGQLS
Sbjct: 121 ICTAKTEWLDGKHVVFGQVIEGMDVVKAVEKVGSSSGRTSKAVVIADCGQLS 172

[Close]

BLAST of Lsi11G011820 vs. NCBI nr
Match: BAQ21277.1 (cyclophilin [Citrus tamurana] >GAY67145.1 hypothetical protein CUMW_254230 [Citrus unshiu])

HSP 1 Score: 349.7 bits (896), Expect = 1.4e-92
Identity = 161/172 (93.60%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
           MPNPKVFFDMT+GGQPAGRIVMEL+ADVTPRTAENFRALCTGEKGVG+SGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSF 60

Query: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120
           HRVIP FMCQGGDFTAGNGTGGESIYG+KFADENF+KKHTGPGILSMANAGPGTNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           +CTAKTEWLDGKHVVFGQVVEGMDVVKA+EKVGSSSGRT++PVV+ADCGQLS
Sbjct: 121 VCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 172

[Close]

BLAST of Lsi11G011820 vs. NCBI nr
Match: KAG4979361.1 (hypothetical protein JHK85_033319 [Glycine max])

HSP 1 Score: 349.7 bits (896), Expect = 1.4e-92
Identity = 164/172 (95.35%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1    MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
            MPNPKVFFDMTIGGQPAGRIVMELYADVTP TAENFRALCTGEKG GRSGKPLHYKGSSF
Sbjct: 2000 MPNPKVFFDMTIGGQPAGRIVMELYADVTPSTAENFRALCTGEKGAGRSGKPLHYKGSSF 2059

Query: 61   HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120
            HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENF+KKHTGPGILSMANAGPGTNGSQFF
Sbjct: 2060 HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQFF 2119

Query: 121  ICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
            ICT KTEWLDGKHVVFGQVVEGMDVVK +EKVGSSSGRT++PVVVADCGQLS
Sbjct: 2120 ICTTKTEWLDGKHVVFGQVVEGMDVVKEIEKVGSSSGRTAKPVVVADCGQLS 2171

[Close]

BLAST of Lsi11G011820 vs. NCBI nr
Match: XP_016701538.1 (peptidyl-prolyl cis-trans isomerase [Gossypium hirsutum] >XP_017623315.1 PREDICTED: peptidyl-prolyl cis-trans isomerase [Gossypium arboreum] >KAB2045811.1 hypothetical protein ES319_D01G187700v1 [Gossypium barbadense] >KAG8503698.1 hypothetical protein CXB51_001697 [Gossypium anomalum] >TYG83857.1 hypothetical protein ES288_D01G201900v1 [Gossypium darwinii] >TYH88671.1 hypothetical protein ES332_D01G203900v1 [Gossypium tomentosum] >TYI98161.1 hypothetical protein E1A91_D01G193800v1 [Gossypium mustelinum])

HSP 1 Score: 349.7 bits (896), Expect = 1.4e-92
Identity = 165/170 (97.06%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 3   NPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 62
           NPKVFFDMTIGGQPAGRIVMEL+AD TPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR
Sbjct: 4   NPKVFFDMTIGGQPAGRIVMELFADCTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 63

Query: 63  VIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 122
           VIPNFMCQGGDFTAGNGTGGESIYG+KFADENFIKKHTGPGILSMANAGPGTNGSQFFIC
Sbjct: 64  VIPNFMCQGGDFTAGNGTGGESIYGSKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 123

Query: 123 TAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           TAKTEWLDGKHVVFGQVVEGMDVVKA+EKVGSSSGRTS+PVVVADCGQLS
Sbjct: 124 TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSKPVVVADCGQLS 173

[Close]

BLAST of Lsi11G011820 vs. TAIR 10
Match: AT2G21130.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 318.2 bits (814), Expect = 4.2e-87
Identity = 145/170 (85.29%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 3   NPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 62
           +PKVFFDMTIGG PAG+IVMELY D TP+TAENFRALCTGEKGVGRSGKPLH+KGSSFHR
Sbjct: 4   HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHR 63

Query: 63  VIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 122
           VIPNFMCQGGDFT GNGTGGESIYGAKF DENF +KHTGPGILSMANAG  TNGSQFFIC
Sbjct: 64  VIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFIC 123

Query: 123 TAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           T KT+WLDGKHVVFGQVVEG+DVVKA+EK+GSSSG+ ++PVV+ADCG++S
Sbjct: 124 TVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173

[Close]

BLAST of Lsi11G011820 vs. TAIR 10
Match: AT2G16600.1 (rotamase CYP 3 )

HSP 1 Score: 316.6 bits (810), Expect = 1.2e-86
Identity = 144/170 (84.71%), Postives = 158/170 (92.94%), Query Frame = 0


Query: 3   NPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 62
           NPKV+FDMT+GG+ AGRIVMELYAD TP TAENFRALCTGE+G+G+ GKPLHYKGSSFHR
Sbjct: 4   NPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHR 63

Query: 63  VIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 122
           VIP FMCQGGDFTAGNGTGGESIYG+KF DENFIKKHTGPGILSMANAG  TNGSQFFIC
Sbjct: 64  VIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFIC 123

Query: 123 TAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           T KT WLDGKHVVFGQVVEG++VV+ +EKVGS SGRTS+PVV+ADCGQ+S
Sbjct: 124 TEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173

[Close]

BLAST of Lsi11G011820 vs. TAIR 10
Match: AT4G38740.1 (rotamase CYP 1 )

HSP 1 Score: 316.6 bits (810), Expect = 1.2e-86
Identity = 148/172 (86.05%), Postives = 159/172 (92.44%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
           M  PKV+FDMTI GQPAGRIVMELY D TPRTAENFRALCTGEKGVG +GKPLH+KGS F
Sbjct: 1   MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60

Query: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120
           HRVIPNFMCQGGDFTAGNGTGGESIYG+KF DENF +KHTGPGILSMANAG  TNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFF 120

Query: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           ICT KT+WLDGKHVVFGQVVEG+DVVKA+EKVGSSSG+ ++PVVVADCGQLS
Sbjct: 121 ICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172

[Close]

BLAST of Lsi11G011820 vs. TAIR 10
Match: AT4G34870.1 (rotamase cyclophilin 5 )

HSP 1 Score: 299.3 bits (765), Expect = 2.0e-81
Identity = 138/172 (80.23%), Postives = 152/172 (88.37%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
           M NP+VFFDM++ G P GRI MEL+AD TP TAENFRALCTGEKG+G+ GKPLH+KGS F
Sbjct: 1   MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60

Query: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120
           HRVIP FMCQGGDFTA NGTGGESIYGAKF DENFIKKHTG GILSMAN+GP TNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFF 120

Query: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQLS 173
           ICT KT WLDGKHVVFGQVV+G+DVVKA+EKVGS SG+TS+ V + DCGQLS
Sbjct: 121 ICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172

[Close]

BLAST of Lsi11G011820 vs. TAIR 10
Match: AT3G56070.1 (rotamase cyclophilin 2 )

HSP 1 Score: 283.9 bits (725), Expect = 8.7e-77
Identity = 130/171 (76.02%), Postives = 146/171 (85.38%), Query Frame = 0


Query: 1   MPNPKVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
           M NPKVFFD+ IG   AGR+VMEL+ADVTPRTA NFRALCTGE G+G++GK LHYKGS+F
Sbjct: 1   MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60

Query: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120
           HR+IP FMCQGGDFT GNGTGGESIYG+KF DENF  KHTGPGILSMAN+GP TNGSQFF
Sbjct: 61  HRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFF 120

Query: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSRPVVVADCGQL 172
           ICT KT WLDGKHVVFG+VV+G +VVKA+E VGS  G  S  VV+ DCG+L
Sbjct: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171

The following BLAST results are available for this feature:

BLAST of Lsi11G011820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W171	3.2e-92	91.86	Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max OX=3847 GN=Cyp1 PE=2 SV=1	[more]
Q39613	9.4e-92	91.86	Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus OX=4058 GN=PCKR1 PE=1...	[more]
O49886	9.7e-89	88.37	Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus OX=3873 PE=2 SV=1	[more]
P21568	1.7e-88	87.72	Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum OX=4081 GN=CYP PE=2 ...	[more]
Q9SKQ0	5.9e-86	85.29	Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of Lsi11G011820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U8B9	4.7e-94	97.09	Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BJB0	4.7e-94	97.09	Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103490307 PE=3...	[more]
G8XQW2	6.7e-93	97.06	Peptidyl-prolyl cis-trans isomerase OS=Gossypium hirsutum OX=3635 GN=LOC10791670...	[more]
A0A5D2HN69	6.7e-93	97.06	Peptidyl-prolyl cis-trans isomerase OS=Gossypium darwinii OX=34276 GN=ES288_A01G...	[more]
A0A2P5YKR2	6.7e-93	97.06	Peptidyl-prolyl cis-trans isomerase OS=Gossypium barbadense OX=3634 GN=ES319_A01...	[more]

BLAST of Lsi11G011820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447986.1	9.6e-94	97.09	PREDICTED: peptidyl-prolyl cis-trans isomerase [Cucumis melo] >KAA0049729.1 pept...	[more]
XP_038888644.1	1.1e-92	95.35	peptidyl-prolyl cis-trans isomerase [Benincasa hispida]	[more]
BAQ21277.1	1.4e-92	93.60	cyclophilin [Citrus tamurana] >GAY67145.1 hypothetical protein CUMW_254230 [Citr...	[more]
KAG4979361.1	1.4e-92	95.35	hypothetical protein JHK85_033319 [Glycine max]	[more]
XP_016701538.1	1.4e-92	97.06	peptidyl-prolyl cis-trans isomerase [Gossypium hirsutum] >XP_017623315.1 PREDICT...	[more]

BLAST of Lsi11G011820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21130.1	4.2e-87	85.29	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT2G16600.1	1.2e-86	84.71	rotamase CYP 3	[more]
AT4G38740.1	1.2e-86	86.05	rotamase CYP 1	[more]
AT4G34870.1	2.0e-81	80.23	rotamase cyclophilin 5	[more]
AT3G56070.1	8.7e-77	76.02	rotamase cyclophilin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 24..39 score: 62.55 coord: 131..146 score: 72.77 coord: 103..118 score: 81.15 coord: 118..130 score: 69.29 coord: 60..72 score: 81.69
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 8..169 e-value: 4.5E-49 score: 166.7
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50072	CSA_PPIASE_2	coord: 7..170 score: 46.266838
IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	PIRSF	PIRSF001467	Peptidylpro_ismrse	coord: 1..172 e-value: 3.4E-81 score: 269.0
IPR029000	Cyclophilin-like domain superfamily	GENE3D	2.40.100.10		coord: 1..172 e-value: 4.4E-86 score: 289.9
IPR029000	Cyclophilin-like domain superfamily	SUPERFAMILY	50891	Cyclophilin-like	coord: 2..171
None	No IPR available	PANTHER	PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 1..172
None	No IPR available	PANTHER	PTHR11071:SF439	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 1..172
None	No IPR available	CDD	cd01926	cyclophilin_ABH_like	coord: 4..169 e-value: 1.68238E-121 score: 337.692
IPR020892	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	PROSITE	PS00170	CSA_PPIASE_1	coord: 55..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G011820.1	Lsi11G011820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016018	cyclosporin A binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity