Lsi11G011730 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATCCATTTGACAGGAATAGCAAATGCAAAGCAAAAGTTACAGAGAACCTTTTCGGCGAAATACGGAATTGGATCGGCGGTGACGAATGTTCCTAAAGGCCATTTTGCAGTGTACGTAGGAGAAACACAAAAGAAGAGGTTTGTAATTCCGATATGGTACCTGAATCATCCATTGTTTAAGGATTTGCTGAACCTTGCTGAAGAAGAATTTGGATTCGATCATCCAATGGGCGGCCTCACGATTCCTTGCAGCGAAGATTACTTCATCAGCTTAACTTCAGCCCTAAATTGTTCATATATCCATTTGGAATCCCCTTTTCTCTTCATCATCTACCCTAATTTTTAA ATGGGAATCCATTTGACAGGAATAGCAAATGCAAAGCAAAAGTTACAGAGAACCTTTTCGGCGAAATACGGAATTGGATCGGCGGTGACGAATGTTCCTAAAGGCCATTTTGCAGTGTACGTAGGAGAAACACAAAAGAAGAGGTTTGTAATTCCGATATGGTACCTGAATCATCCATTGTTTAAGGATTTGCTGAACCTTGCTGAAGAAGAATTTGGATTCGATCATCCAATGGGCGGCCTCACGATTCCTTGCAGCGAAGATTACTTCATCAGCTTAACTTCAGCCCTAAATTGTTCATATATCCATTTGGAATCCCCTTTTCTCTTCATCATCTACCCTAATTTTTAA ATGGGAATCCATTTGACAGGAATAGCAAATGCAAAGCAAAAGTTACAGAGAACCTTTTCGGCGAAATACGGAATTGGATCGGCGGTGACGAATGTTCCTAAAGGCCATTTTGCAGTGTACGTAGGAGAAACACAAAAGAAGAGGTTTGTAATTCCGATATGGTACCTGAATCATCCATTGTTTAAGGATTTGCTGAACCTTGCTGAAGAAGAATTTGGATTCGATCATCCAATGGGCGGCCTCACGATTCCTTGCAGCGAAGATTACTTCATCAGCTTAACTTCAGCCCTAAATTGTTCATATATCCATTTGGAATCCCCTTTTCTCTTCATCATCTACCCTAATTTTTAA MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCSYIHLESPFLFIIYPNF Homology
BLAST of Lsi11G011730 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 5.6e-24 Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = 0
BLAST of Lsi11G011730 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 3.1e-22 Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Lsi11G011730 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.0e-22 Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 0
BLAST of Lsi11G011730 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.9e-22 Identity = 53/98 (54.08%), Postives = 66/98 (67.35%), Query Frame = 0
BLAST of Lsi11G011730 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.9e-22 Identity = 55/98 (56.12%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of Lsi11G011730 vs. ExPASy TrEMBL
Match: A0A0A0K174 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009140 PE=3 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.8e-49 Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 0
BLAST of Lsi11G011730 vs. ExPASy TrEMBL
Match: A0A5D3CL70 (Auxin-induced protein 15A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001000 PE=3 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 6.9e-49 Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0
BLAST of Lsi11G011730 vs. ExPASy TrEMBL
Match: A0A1S3BIQ8 (auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103490316 PE=3 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 6.9e-49 Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0
BLAST of Lsi11G011730 vs. ExPASy TrEMBL
Match: A0A6J1C266 (auxin-induced protein 15A-like OS=Momordica charantia OX=3673 GN=LOC111007693 PE=3 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48 Identity = 96/100 (96.00%), Postives = 97/100 (97.00%), Query Frame = 0
BLAST of Lsi11G011730 vs. ExPASy TrEMBL
Match: A0A6J1I2U1 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111468489 PE=3 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 3.4e-48 Identity = 95/100 (95.00%), Postives = 97/100 (97.00%), Query Frame = 0
BLAST of Lsi11G011730 vs. NCBI nr
Match: XP_038887902.1 (auxin-induced protein 15A-like [Benincasa hispida]) HSP 1 Score: 208.0 bits (528), Expect = 4.4e-50 Identity = 100/102 (98.04%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of Lsi11G011730 vs. NCBI nr
Match: XP_011658585.1 (auxin-responsive protein SAUR21 [Cucumis sativus] >KGN43218.1 hypothetical protein Csa_020268 [Cucumis sativus]) HSP 1 Score: 204.9 bits (520), Expect = 3.7e-49 Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 0
BLAST of Lsi11G011730 vs. NCBI nr
Match: XP_008448001.1 (PREDICTED: auxin-induced protein 15A [Cucumis melo] >KAA0049715.1 auxin-induced protein 15A [Cucumis melo var. makuwa] >TYK12160.1 auxin-induced protein 15A [Cucumis melo var. makuwa]) HSP 1 Score: 203.0 bits (515), Expect = 1.4e-48 Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0
BLAST of Lsi11G011730 vs. NCBI nr
Match: XP_022135840.1 (auxin-induced protein 15A-like [Momordica charantia]) HSP 1 Score: 202.2 bits (513), Expect = 2.4e-48 Identity = 96/100 (96.00%), Postives = 97/100 (97.00%), Query Frame = 0
BLAST of Lsi11G011730 vs. NCBI nr
Match: XP_023553727.1 (auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 200.7 bits (509), Expect = 7.0e-48 Identity = 95/100 (95.00%), Postives = 97/100 (97.00%), Query Frame = 0
BLAST of Lsi11G011730 vs. TAIR 10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 142.9 bits (359), Expect = 1.6e-34 Identity = 72/104 (69.23%), Postives = 81/104 (77.88%), Query Frame = 0
BLAST of Lsi11G011730 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 109.0 bits (271), Expect = 2.6e-24 Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = 0
BLAST of Lsi11G011730 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 107.8 bits (268), Expect = 5.8e-24 Identity = 53/101 (52.48%), Postives = 69/101 (68.32%), Query Frame = 0
BLAST of Lsi11G011730 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 105.9 bits (263), Expect = 2.2e-23 Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Lsi11G011730 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 105.5 bits (262), Expect = 2.9e-23 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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