Lsi11G009920 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G009920
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X1
Location	chr11: 16600908 .. 16603133 (-)
RNA-Seq Expression	Lsi11G009920
Synteny	Lsi11G009920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATTGATTTTGATAGATTCAATCGAAAGATTCCACATTTTGGCATTTCTCTTGTTTGTTTTGGCTCAAAACATTTTGGAGGCAGAGGGTCCTTGGTTTGGGAGTTTTCTCTATGTAAGTTGTCTCGACCATCTTTACTTGAAACATTATGTTACGAAAATTAATTAGTAGAATTCTTTTTCTAATAAATTTTATTTGGTGGCTGCAGAATGCGCTCATGGTTTTCATCTGTGAAATGCTCATTGATATCATAAAGCACTCATTCTTAGCTAAATTCAACGACATAAAGCCTATCGCATACTCAGAGTTTCTTGAAGACCTTTGCAAACAGGTTCATGACTTTCGCATTTTTGCTTTTTTCTCCCTTTATCCGTTTAATGCATCTGTCAATTTTTTCTCGTAATTGCATAATCTAACCCTTTTTTTTCTAATAATTGTTGTTACATCCATCCTTAGGCTCTAAATATGCAAGGTGAAGATGCAAAGAAAAATTTGACATTTATTCCCGTTGCGCCAGCATGTGTGGTATGGATGCTTGTTTTATAGTTTAGATATCTTTCTTTAAATGGAAAAATAACTTCTTCATTGATGATTAATGAATGAAATGACCACCAATGGTGGATTAAAAAATAACTCCAATTGTAAATTAAAGAAGAAAGACTATAATTAAAAGGCTGGGTATATTTTCACGAATAGAGGGCGTTAAATAAAATAAAACCAAATCCATAAAAGTGGCAAAAGACGAGTGCTTAGCATCGAAGATTTTTTCATGAGCTTATTTAATCCCCTTCTATTACTTGAGAAAAATCTTGATAACTAATGTTGGAAATATGCTTCTATGAACCATAAAACCTGTACCAAGGAAGGAGTGTCTTGCCTCGTTATATGAACATTAAGTGTTTAGGTTTTAAATACTACTTTGGTCTTGTACTTTTGACTTTAGTTCATTTTGGTTCTTGTATTTTTAAAATGTTCATTTTGGTTCTTAAACTTTCAACTTTTAAAATGTTCATTTTGGTCCTTGAACTTTCAAAAGGTGACCATTTTGATACCTTAAAAATGAAGTAAAAATAAAAGGACCAAAATGGTATTTTTTTTTTTAAGTACAAGGACCAAAACGAACATTATGAAAGTATAGGGACCAAAATGAACCAAAGTTAAAAGTATAGGGAGCAAAATGAACATTTTGAAAGTATAGGGACCAAAATGAACCAAAATCAAAAGTATAGAGACCAAAGTAGTAGTTAAACCTACAATGTATTTACCGTCGATAGATAGATTCAGGAACATTTAAGCAAAATACCTCTTGAATTGTCCGGAAGGGATCTTTTCCTGCAGATTATGATCATTTTTGCTAGCTTGAGCTTGGATTTTTGGATGCATAAGGCGTTGCTATTATGTGTAAACTAAAGATTCGGCAACATTTATCCAATAAGACCTTTTGAATAGCCCAAAATGGATCTTTAATTACTTGCGGATTATGATCATTTTTGGTAGTTAAGTTAAAAAAAATTTGGATGCATAAAGTATTGTTTCACATTCAATGTAGGTCATTCGCGTGCTGACTCCCGTATATGCTGCCCTTCTTCCTTACAATCCTCTCCCATGGAGGTTTCTTTCGGTTCCGCTCCTCTTCGGTGTGACCTATGTGATGCTTATAAGCCTCAAGATTTTGGTTGGCATTAGTCTGCAGAAGTATGCAACTTGGTATATCGACCGATGCCGAAAGAAGAAGCATCATCTACACACCGACTAATCAGAAGAAGGATCGGTATTAAACCTTGCTCACATTATGATCAAATGACATTGTTGCTTCAAGTGCTTGCCATGACATGCCACATAGATGATGACTCACCTTGCTCATGCTGTGGGTTGAAGCAGCAAACTTGAGATCCTTTTTGCCACAGGTTTTCGGGATGTCATACTTTTCGGTATCAAGATGCAAAATGTGAATACAAAGGAGTAAAGAAAAATGAACTTGCGCATCAAATTTTGCTATTTACTACCATCTTATAGAGGTTGTGGCTTTAGGAGTTGGCAATCATGAGTTGCACACTCTCATATGGTTCACACTAGAAATTGTATCATTGAATAAAAAAACAATAGAAGAAAAGATTTTCCGGCATACTTTCTCCCATCGGTATTATTTAGGAGAAAAATTATAAATTTTGAAATTTTGATGATTGAATGTAGAGATTAAGTGCACTTGGAGAGTTGGCGACA

mRNA sequence

ATGTTATTGATTTTGATAGATTCAATCGAAAGATTCCACATTTTGGCATTTCTCTTGTTTGTTTTGGCTCAAAACATTTTGGAGGCAGAGGGTCCTTGGTTTGGGAGTTTTCTCTATAATGCGCTCATGGTTTTCATCTGTGAAATGCTCATTGATATCATAAAGCACTCATTCTTAGCTAAATTCAACGACATAAAGCCTATCGCATACTCAGAGTTTCTTGAAGACCTTTGCAAACAGGCTCTAAATATGCAAGGTGAAGATGCAAAGAAAAATTTGACATTTATTCCCGTTGCGCCAGCATGTGTGGTCATTCGCGTGCTGACTCCCGTATATGCTGCCCTTCTTCCTTACAATCCTCTCCCATGGAGGTTTCTTTCGGTTCCGCTCCTCTTCGGTGTGACCTATGTGATGCTTATAAGCCTCAAGATTTTGGTTGGCATTAGTCTGCAGAAGTATGCAACTTGGTATATCGACCGATGCCGAAAGAAGAAGCATCATCTACACACCGACTAATCAGAAGAAGGATCGGTATTAAACCTTGCTCACATTATGATCAAATGACATTGTTGCTTCAAGTGCTTGCCATGACATGCCACATAGATGATGACTCACCTTGCTCATGCTGTGGGTTGAAGCAGCAAACTTGAGATCCTTTTTGCCACAGGTTTTCGGGATGTCATACTTTTCGGTATCAAGATGCAAAATGTGAATACAAAGGAGTAAAGAAAAATGAACTTGCGCATCAAATTTTGCTATTTACTACCATCTTATAGAGGTTGTGGCTTTAGGAGTTGGCAATCATGAGTTGCACACTCTCATATGGTTCACACTAGAAATTGTATCATTGAATAAAAAAACAATAGAAGAAAAGATTTTCCGGCATACTTTCTCCCATCGGTATTATTTAGGAGAAAAATTATAAATTTTGAAATTTTGATGATTGAATGTAGAGATTAAGTGCACTTGGAGAGTTGGCGACA

Coding sequence (CDS)

ATGTTATTGATTTTGATAGATTCAATCGAAAGATTCCACATTTTGGCATTTCTCTTGTTTGTTTTGGCTCAAAACATTTTGGAGGCAGAGGGTCCTTGGTTTGGGAGTTTTCTCTATAATGCGCTCATGGTTTTCATCTGTGAAATGCTCATTGATATCATAAAGCACTCATTCTTAGCTAAATTCAACGACATAAAGCCTATCGCATACTCAGAGTTTCTTGAAGACCTTTGCAAACAGGCTCTAAATATGCAAGGTGAAGATGCAAAGAAAAATTTGACATTTATTCCCGTTGCGCCAGCATGTGTGGTCATTCGCGTGCTGACTCCCGTATATGCTGCCCTTCTTCCTTACAATCCTCTCCCATGGAGGTTTCTTTCGGTTCCGCTCCTCTTCGGTGTGACCTATGTGATGCTTATAAGCCTCAAGATTTTGGTTGGCATTAGTCTGCAGAAGTATGCAACTTGGTATATCGACCGATGCCGAAAGAAGAAGCATCATCTACACACCGACTAA

Protein sequence

MLLILIDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKFNDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPYNPLPWRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKKKHHLHTD

Homology

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BLAST of Lsi11G009920 vs. ExPASy Swiss-Prot
Match: F4HVJ3 (Protein POLLEN DEFECTIVE IN GUIDANCE 1 OS=Arabidopsis thaliana OX=3702 GN=POD1 PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.3e-64
Identity = 121/170 (71.18%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 3   LILIDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 62
           L+  DSIERFHI AFL+ VLAQNILE+EG WFG+F+YNA  VF CEM+IDIIKHSFLAKF
Sbjct: 455 LVYADSIERFHISAFLVSVLAQNILESEGAWFGNFIYNATTVFFCEMMIDIIKHSFLAKF 514

Query: 63  NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPYNPLP 122
           NDIKPIAYSEFL+ LC+Q LN++ ED K NLTF+P+APACVVIRVLTPVYAA LPY+PLP
Sbjct: 515 NDIKPIAYSEFLQALCEQTLNIRPEDRKTNLTFVPLAPACVVIRVLTPVYAAHLPYSPLP 574

Query: 123 WRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKK-KHHLHTD 172
           WR L + +LF +TY+ML SLK+L+G+ L+K+ATWYI+RCR++   HLH D
Sbjct: 575 WRMLWMVILFVITYIMLTSLKVLIGMGLRKHATWYINRCRRRNSSHLHND 624

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BLAST of Lsi11G009920 vs. ExPASy Swiss-Prot
Match: Q9U3H8 (Protein TAPT1 homolog OS=Caenorhabditis elegans OX=6239 GN=F26F2.7 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 43/168 (25.60%), Postives = 80/168 (47.62%), Query Frame = 0


Query: 7   DSIERFHILAFLLFVLAQNILEAEGPW----FGSFLYNALMVFICEMLIDIIKHSFLAKF 66
           D  ERFHI A L  V+ +N+      W    F   + + +MV  CE  +D +KH+F+ KF
Sbjct: 373 DVRERFHIFALLFVVMIRNMTAVN--WNIDSFTEMIPDIIMVVGCEYFVDWLKHAFITKF 432

Query: 67  NDIKPIAYSEF--------LEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAA 126
           N+I    Y +F        +    + A +   +   + + FIP+  + ++IRVL+  +  
Sbjct: 433 NEINAEVYKDFTITIAFDVIRSRDQSAFSDYSDQVSRRMGFIPIPLSIMIIRVLSQTFTL 492

Query: 127 LLPYNPLPWRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCR 163
                   W      ++FG+ ++++ ++KI  G+ +   A  ++ R R
Sbjct: 493 ------DNW---GSCIIFGIGWLLVFAVKICNGVVMLGQACHHVKRFR 529

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BLAST of Lsi11G009920 vs. ExPASy Swiss-Prot
Match: Q550C1 (Protein TAPT1 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0277313 PE=3 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 7.8e-06
Identity = 43/153 (28.10%), Postives = 71/153 (46.41%), Query Frame = 0


Query: 7   DSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNAL----MVFICEMLIDIIKHSFLAKF 66
           D +ERF    FL  ++ QN+ +        F  N L     V+  E+L+D IKH+F+ KF
Sbjct: 633 DIVERFQAFIFLTIIIFQNLSDLNWDLSWDFAINMLTVVGTVWGSEVLVDAIKHAFITKF 692

Query: 67  NDIKPIAYSEFLEDLCKQALNMQGEDAKKN-------LTFIPVAPACVVIRVLTPVYAAL 126
           N   P  YS+F   L    ++ +  +  ++       + F+P   A +V+R    V+   
Sbjct: 693 NKFSPQMYSKFFVLLSDTIVDPRNRNFTESSWGVNNIIGFVPFPLASIVVR----VFHKF 752

Query: 127 LPYNPLPWRFLSVPLLFGVTYVMLISLKILVGI 149
           +P   +   FL V +     Y+ L+ LKI + I
Sbjct: 753 IPSKGIFGIFLMVQI-----YICLVLLKIFIKI 776

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BLAST of Lsi11G009920 vs. ExPASy Swiss-Prot
Match: Q4VBD2 (Transmembrane anterior posterior transformation protein 1 OS=Mus musculus OX=10090 GN=Tapt1 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-05
Identity = 52/173 (30.06%), Postives = 78/173 (45.09%), Query Frame = 0


Query: 7   DSIERFHILAFLLFVLAQNILEAEGPWFGSFLY----NALMVFICEMLIDIIKHSFLAKF 66
           D  ERF     LL V  +N+   +  W    L+    +  MV   E+ +DI+KH+F+ KF
Sbjct: 303 DIKERFTNYVLLLIVCLRNM--EQFSWNPDHLWVLFPDVCMVIASEIAVDIVKHAFITKF 362

Query: 67  NDIKPIAYSEFLEDLC--------KQALNMQGEDAKKNLTFIPVAPACVVIRVLTP--VY 126
           NDI    YSE+   L         K A     +   + + FIP+  A ++IRV+T     
Sbjct: 363 NDITADVYSEYRASLAFDLVSSRQKNAYTDYSDSVARRMGFIPLPLAVLLIRVVTSSIKV 422

Query: 127 AALLPYNPLPWRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKKK 166
             +L Y        +  +LF   Y  LISLKIL  I L   +  Y+   + ++
Sbjct: 423 QGILSY--------ACVILF---YFGLISLKILNSIVLLGKSCQYVKEAKMEE 462

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BLAST of Lsi11G009920 vs. ExPASy Swiss-Prot
Match: Q6NXT6 (Transmembrane anterior posterior transformation protein 1 homolog OS=Homo sapiens OX=9606 GN=TAPT1 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-05
Identity = 51/173 (29.48%), Postives = 78/173 (45.09%), Query Frame = 0


Query: 7   DSIERFHILAFLLFVLAQNILEAEGPWFGSFLY----NALMVFICEMLIDIIKHSFLAKF 66
           D  ERF     LL V  +N+   +  W    L+    +  MV   E+ +DI+KH+F+ KF
Sbjct: 306 DIKERFTNYVLLLIVCLRNM--EQFSWNPDHLWVLFPDVCMVIASEIAVDIVKHAFITKF 365

Query: 67  NDIKPIAYSEFLEDLC--------KQALNMQGEDAKKNLTFIPVAPACVVIRVLTP--VY 126
           NDI    YSE+   L         K A     +   + + FIP+  A ++IRV+T     
Sbjct: 366 NDITADVYSEYRASLAFDLVSSRQKNAYTDYSDSVARRMGFIPLPLAVLLIRVVTSSIKV 425

Query: 127 AALLPYNPLPWRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKKK 166
             +L Y        +  +LF   Y  LISLK+L  I L   +  Y+   + ++
Sbjct: 426 QGILSY--------ACVILF---YFGLISLKVLNSIVLLGKSCQYVKEAKMEE 465

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BLAST of Lsi11G009920 vs. ExPASy TrEMBL
Match: A0A0A0K3C5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219260 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.0e-84
Identity = 159/169 (94.08%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 3   LILIDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 62
           L+  DSIERFHILAFLLFVLAQNILEAEGPWFG+FLYNALMVFICEMLIDIIKHSFLAKF
Sbjct: 459 LVYFDSIERFHILAFLLFVLAQNILEAEGPWFGNFLYNALMVFICEMLIDIIKHSFLAKF 518

Query: 63  NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPYNPLP 122
           NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLP+NPLP
Sbjct: 519 NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPFNPLP 578

Query: 123 WRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKKKHHLHTD 172
           WRF+SVPLL GVTYVML+SLKILVG+SLQKYATWYIDRC+KKKHHLHTD
Sbjct: 579 WRFVSVPLLLGVTYVMLVSLKILVGLSLQKYATWYIDRCQKKKHHLHTD 627

[Close]

BLAST of Lsi11G009920 vs. ExPASy TrEMBL
Match: A0A1S3BHQ5 (protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490200 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.7e-84
Identity = 159/169 (94.08%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 3   LILIDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 62
           L+  DSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF
Sbjct: 473 LVYFDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 532

Query: 63  NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPYNPLP 122
           NDIKPIAYSEFLEDLCKQALNMQ EDAKKNLTFIPVAPACVVIRVLTPVYAALLP+NPLP
Sbjct: 533 NDIKPIAYSEFLEDLCKQALNMQDEDAKKNLTFIPVAPACVVIRVLTPVYAALLPFNPLP 592

Query: 123 WRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKKKHHLHTD 172
           WRF+SVPLL GVTYVML+SLKILVGISLQKYATWYIDRCRK+KHHLH D
Sbjct: 593 WRFVSVPLLLGVTYVMLVSLKILVGISLQKYATWYIDRCRKRKHHLHAD 641

[Close]

BLAST of Lsi11G009920 vs. ExPASy TrEMBL
Match: A0A1S3BIB0 (protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490200 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.7e-84
Identity = 159/169 (94.08%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 3   LILIDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 62
           L+  DSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF
Sbjct: 468 LVYFDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 527

Query: 63  NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPYNPLP 122
           NDIKPIAYSEFLEDLCKQALNMQ EDAKKNLTFIPVAPACVVIRVLTPVYAALLP+NPLP
Sbjct: 528 NDIKPIAYSEFLEDLCKQALNMQDEDAKKNLTFIPVAPACVVIRVLTPVYAALLPFNPLP 587

Query: 123 WRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKKKHHLHTD 172
           WRF+SVPLL GVTYVML+SLKILVGISLQKYATWYIDRCRK+KHHLH D
Sbjct: 588 WRFVSVPLLLGVTYVMLVSLKILVGISLQKYATWYIDRCRKRKHHLHAD 636

[Close]

BLAST of Lsi11G009920 vs. ExPASy TrEMBL
Match: A0A6J1EEL0 (protein POLLEN DEFECTIVE IN GUIDANCE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433424 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.8e-83
Identity = 159/169 (94.08%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 3   LILIDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 62
           L+  DSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF
Sbjct: 471 LVYFDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 530

Query: 63  NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPYNPLP 122
           N IKPIAYSEFLEDLCKQALNM  EDAKKNLTF+PVAPACVVIRVLTPVYAALLPYNPLP
Sbjct: 531 NGIKPIAYSEFLEDLCKQALNMPCEDAKKNLTFVPVAPACVVIRVLTPVYAALLPYNPLP 590

Query: 123 WRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKKKHHLHTD 172
           WRFLSVPLLFGVTYVMLISLKILVG+SLQKYATWYI+RCRKKKHHLH D
Sbjct: 591 WRFLSVPLLFGVTYVMLISLKILVGLSLQKYATWYINRCRKKKHHLHAD 639

[Close]

BLAST of Lsi11G009920 vs. ExPASy TrEMBL
Match: A0A6J1EKK0 (protein POLLEN DEFECTIVE IN GUIDANCE 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433424 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 4.8e-83
Identity = 159/169 (94.08%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 3   LILIDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 62
           L+  DSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF
Sbjct: 466 LVYFDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 525

Query: 63  NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPYNPLP 122
           N IKPIAYSEFLEDLCKQALNM  EDAKKNLTF+PVAPACVVIRVLTPVYAALLPYNPLP
Sbjct: 526 NGIKPIAYSEFLEDLCKQALNMPCEDAKKNLTFVPVAPACVVIRVLTPVYAALLPYNPLP 585

Query: 123 WRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKKKHHLHTD 172
           WRFLSVPLLFGVTYVMLISLKILVG+SLQKYATWYI+RCRKKKHHLH D
Sbjct: 586 WRFLSVPLLFGVTYVMLISLKILVGLSLQKYATWYINRCRKKKHHLHAD 634

[Close]

BLAST of Lsi11G009920 vs. NCBI nr
Match: XP_004139799.1 (protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 4.0e-84
Identity = 159/169 (94.08%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 3   LILIDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 62
           L+  DSIERFHILAFLLFVLAQNILEAEGPWFG+FLYNALMVFICEMLIDIIKHSFLAKF
Sbjct: 473 LVYFDSIERFHILAFLLFVLAQNILEAEGPWFGNFLYNALMVFICEMLIDIIKHSFLAKF 532

Query: 63  NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPYNPLP 122
           NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLP+NPLP
Sbjct: 533 NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPFNPLP 592

Query: 123 WRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKKKHHLHTD 172
           WRF+SVPLL GVTYVML+SLKILVG+SLQKYATWYIDRC+KKKHHLHTD
Sbjct: 593 WRFVSVPLLLGVTYVMLVSLKILVGLSLQKYATWYIDRCQKKKHHLHTD 641

[Close]

BLAST of Lsi11G009920 vs. NCBI nr
Match: XP_011658997.1 (protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X2 [Cucumis sativus] >KAE8646067.1 hypothetical protein Csa_016604 [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 4.0e-84
Identity = 159/169 (94.08%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 3   LILIDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 62
           L+  DSIERFHILAFLLFVLAQNILEAEGPWFG+FLYNALMVFICEMLIDIIKHSFLAKF
Sbjct: 468 LVYFDSIERFHILAFLLFVLAQNILEAEGPWFGNFLYNALMVFICEMLIDIIKHSFLAKF 527

Query: 63  NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPYNPLP 122
           NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLP+NPLP
Sbjct: 528 NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPFNPLP 587

Query: 123 WRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKKKHHLHTD 172
           WRF+SVPLL GVTYVML+SLKILVG+SLQKYATWYIDRC+KKKHHLHTD
Sbjct: 588 WRFVSVPLLLGVTYVMLVSLKILVGLSLQKYATWYIDRCQKKKHHLHTD 636

[Close]

BLAST of Lsi11G009920 vs. NCBI nr
Match: XP_008447820.1 (PREDICTED: protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X1 [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83
Identity = 159/169 (94.08%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 3   LILIDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 62
           L+  DSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF
Sbjct: 473 LVYFDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 532

Query: 63  NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPYNPLP 122
           NDIKPIAYSEFLEDLCKQALNMQ EDAKKNLTFIPVAPACVVIRVLTPVYAALLP+NPLP
Sbjct: 533 NDIKPIAYSEFLEDLCKQALNMQDEDAKKNLTFIPVAPACVVIRVLTPVYAALLPFNPLP 592

Query: 123 WRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKKKHHLHTD 172
           WRF+SVPLL GVTYVML+SLKILVGISLQKYATWYIDRCRK+KHHLH D
Sbjct: 593 WRFVSVPLLLGVTYVMLVSLKILVGISLQKYATWYIDRCRKRKHHLHAD 641

[Close]

BLAST of Lsi11G009920 vs. NCBI nr
Match: XP_008447821.1 (PREDICTED: protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X2 [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83
Identity = 159/169 (94.08%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 3   LILIDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 62
           L+  DSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF
Sbjct: 468 LVYFDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 527

Query: 63  NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPYNPLP 122
           NDIKPIAYSEFLEDLCKQALNMQ EDAKKNLTFIPVAPACVVIRVLTPVYAALLP+NPLP
Sbjct: 528 NDIKPIAYSEFLEDLCKQALNMQDEDAKKNLTFIPVAPACVVIRVLTPVYAALLPFNPLP 587

Query: 123 WRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKKKHHLHTD 172
           WRF+SVPLL GVTYVML+SLKILVGISLQKYATWYIDRCRK+KHHLH D
Sbjct: 588 WRFVSVPLLLGVTYVMLVSLKILVGISLQKYATWYIDRCRKRKHHLHAD 636

[Close]

BLAST of Lsi11G009920 vs. NCBI nr
Match: KAG7037282.1 (Protein POLLEN DEFECTIVE IN GUIDANCE 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.0 bits (811), Expect = 9.9e-83
Identity = 159/169 (94.08%), Postives = 163/169 (96.45%), Query Frame = 0


Query: 3   LILIDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 62
           L+  DSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF
Sbjct: 475 LVYFDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 534

Query: 63  NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPYNPLP 122
           N IKPIAYSEFLEDLCKQALNM  EDAKKNLTF+PVAPACVVIRVLTPVYAALLPYNPLP
Sbjct: 535 NGIKPIAYSEFLEDLCKQALNMPCEDAKKNLTFVPVAPACVVIRVLTPVYAALLPYNPLP 594

Query: 123 WRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKKKHHLHTD 172
           WRFLSVPLLFGVTYVMLISLKILVG+SLQKYATWYI+RCRKKKHHLH D
Sbjct: 595 WRFLSVPLLFGVTYVMLISLKILVGLSLQKYATWYINRCRKKKHHLHAD 643

[Close]

BLAST of Lsi11G009920 vs. TAIR 10
Match: AT1G67960.1 (CONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008010); Has 447 Blast hits to 428 proteins in 176 species: Archae - 0; Bacteria - 0; Metazoa - 190; Fungi - 133; Plants - 49; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). )

HSP 1 Score: 247.3 bits (630), Expect = 9.0e-66
Identity = 121/170 (71.18%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 3   LILIDSIERFHILAFLLFVLAQNILEAEGPWFGSFLYNALMVFICEMLIDIIKHSFLAKF 62
           L+  DSIERFHI AFL+ VLAQNILE+EG WFG+F+YNA  VF CEM+IDIIKHSFLAKF
Sbjct: 455 LVYADSIERFHISAFLVSVLAQNILESEGAWFGNFIYNATTVFFCEMMIDIIKHSFLAKF 514

Query: 63  NDIKPIAYSEFLEDLCKQALNMQGEDAKKNLTFIPVAPACVVIRVLTPVYAALLPYNPLP 122
           NDIKPIAYSEFL+ LC+Q LN++ ED K NLTF+P+APACVVIRVLTPVYAA LPY+PLP
Sbjct: 515 NDIKPIAYSEFLQALCEQTLNIRPEDRKTNLTFVPLAPACVVIRVLTPVYAAHLPYSPLP 574

Query: 123 WRFLSVPLLFGVTYVMLISLKILVGISLQKYATWYIDRCRKK-KHHLHTD 172
           WR L + +LF +TY+ML SLK+L+G+ L+K+ATWYI+RCR++   HLH D
Sbjct: 575 WRMLWMVILFVITYIMLTSLKVLIGMGLRKHATWYINRCRRRNSSHLHND 624

The following BLAST results are available for this feature:

BLAST of Lsi11G009920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HVJ3	1.3e-64	71.18	Protein POLLEN DEFECTIVE IN GUIDANCE 1 OS=Arabidopsis thaliana OX=3702 GN=POD1 P...	[more]
Q9U3H8	1.1e-07	25.60	Protein TAPT1 homolog OS=Caenorhabditis elegans OX=6239 GN=F26F2.7 PE=3 SV=1	[more]
Q550C1	7.8e-06	28.10	Protein TAPT1 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0277313 PE=3 ...	[more]
Q4VBD2	1.3e-05	30.06	Transmembrane anterior posterior transformation protein 1 OS=Mus musculus OX=100...	[more]
Q6NXT6	1.7e-05	29.48	Transmembrane anterior posterior transformation protein 1 homolog OS=Homo sapien...	[more]

BLAST of Lsi11G009920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3C5	2.0e-84	94.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219260 PE=3 SV=1	[more]
A0A1S3BHQ5	9.7e-84	94.08	protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S3BIB0	9.7e-84	94.08	protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1EEL0	4.8e-83	94.08	protein POLLEN DEFECTIVE IN GUIDANCE 1-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1EKK0	4.8e-83	94.08	protein POLLEN DEFECTIVE IN GUIDANCE 1-like isoform X2 OS=Cucurbita moschata OX=...	[more]

BLAST of Lsi11G009920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139799.1	4.0e-84	94.08	protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X1 [Cucumis sativus]	[more]
XP_011658997.1	4.0e-84	94.08	protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X2 [Cucumis sativus] >KAE8646067....	[more]
XP_008447820.1	2.0e-83	94.08	PREDICTED: protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X1 [Cucumis melo]	[more]
XP_008447821.1	2.0e-83	94.08	PREDICTED: protein POLLEN DEFECTIVE IN GUIDANCE 1 isoform X2 [Cucumis melo]	[more]
KAG7037282.1	9.9e-83	94.08	Protein POLLEN DEFECTIVE IN GUIDANCE 1 [Cucurbita argyrosperma subsp. argyrosper...	[more]

BLAST of Lsi11G009920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67960.1	9.0e-66	71.18	CONTAINS InterPro DOMAIN/s: Membrane protein,Tapt1/CMV receptor (InterPro:IPR008...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008010	Tapt1 family	PFAM	PF05346	DUF747	coord: 4..157 e-value: 4.1E-29 score: 102.0
IPR008010	Tapt1 family	PANTHER	PTHR13317	UNCHARACTERIZED	coord: 6..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G009920.1	Lsi11G009920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane