Lsi11G009660 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G009660
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function, DUF538
Location	chr11: 15186963 .. 15189377 (-)
RNA-Seq Expression	Lsi11G009660
Synteny	Lsi11G009660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGATGAAGGAATGAATACGCGAAAAGAAGAGTGAAACGCAAACCTCAGAAATTCCCATTCCTTCTTCTTCTCTTCCTCTTGCAGCCTCCAGGCTTTGCCTCTGTTCTTGCGCCGTTCTTCTCTGCCGCCTTCTTCAACCTCAAAATTCCCAATTCCTCTCTGTCTTCTTCTCCATTTTCCATTTCCGCCATGACCCTTTCTCTCTCTTCCCCTTTCTCTCTCCTCCCCTTCATCCTCTTCTTCTTCGCCTCCCCTCTCATCGCCGCTCCTGACCCATCCACCATTTACGACCATCTCCAACTTCACGGCCTCCCCATCGGCCTCCTCCCCAAGAACATCACCAGATTCTCAATCGATTCTTCCACCGGACGTTTCCAGGTCTTCCTCGACCAACCCTGCAATGCCAAGTTTGAGAATGAGGTTCATTATGATTTCAACGTCTCCGGCAGGCTCACCTACGGCCAGATCGCTGAATTGGCCGGAATTTCCTCCCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCCCACTTCTGGTGTAATTCATTTCGACGTCGGTGTTGTTGACAAGCAATTCTCTCTTTCCCTCTTTGAGTCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCAATCCTTCGCCTTCGATGGAGCCTCTCTCGATTTGGATGGGCCTTTTTCGACGGTACGTTGTTGCTTCATCATCTATTTTACTTGCCCCCGAATTGAAATTTATGGTGCGAGAGTAATTATGATGATGTTGATATCTTTGCTTAAATTTCTGCGTTGCTTTGGGAAATATTGTTGTTCATTATGGATCAGGAAGCATTGGTATTGTACTTCACATAGGGCAGTCATGTCGTGTCAGTTATCAGTACGATAAATCCTTGTTCTGATTTGCCTTGTGTTTATATTGTAGAACTGAATTATTTGTTAATCCATGTTTTCTAAAATTTTTGTAGAATGATGTGTTTAAAGATAATTCATTGCTTTGCTACCTGCTAATCCATATTTAGCATTAGATTAATGCTTTGTGGTGGAAACATCCAGTTTTAACTGATTTAGATTTTAGATGAATACATTGGAGAGTTGTCTAAAATTTGTGATAGAATTTGAAGTTGTAGAGACATGGCAATGGAGTGAATCAATGCTATCACTGTCTTCTTCTTTGAAGAATAGCAGTGTTCATTGTGGCTGTATTGTTGGTCGAGTCATATCATAATGTATTCATGTGTTCGGGTTCTTCGAGTGTGTGATGAGTGTAGATAGCTTTCTGAATTTTGTATGATTCAAGGTCTGTTATTGTAAAGTGCAAAGAGAGACTGATTACAGAAAATTATTCAATGAGGCTTGTCCCTTAATAATGGTTGGATGTTTCGAAAATCTGCATGTTTCCGGTAAGTTGGTAACCACTGAATATAAATTCGAAGTAATTTTGCAGTTTCTTCCTCTCACATCCAACCGTGCAAATTTGGTAGTCACATTGTGGCAGCCTCCTTTAATAATCTTATACTAATTAAGGCCCGGTACATTCTCAACATCTTTAGGAATCAACTTAGGCCATGTTTACTGCTCCGTAATTAAAATTGTTGCAATCGTAATAAAATTTTTTTATCATTCATATAACTCACAGAATATTGTTACTAGTTTTTTGAGAACATATTTAAATGGACCCCACTTTTCATATTACGATTGATTGATTACGTTTACTCTAGGAAGTAAACATGACCTTATATAAATAGGATGAGTATTCATGTTTGAATTCCGAACTATATAATAATTATTATTATTATTTAAATTACGATGCATTTTTCTTTGATTTTATGGTCTCTAGGCTGGGATTTGTATTTGACAGCATTTTATATTATAATATTGGAATACTTCATAATCTACTCATAGTTGGAAGTCACATGTTTTTAATAAGAGGTTGCTTCTTTGGGTTGTCAAATAATTTCAGAAGGAAGCACAGAATCTCCAGCTTGAAGACAGTGAACTAAGGGCAACCTCATAGATTAGCGACAAAGAAATGTTGTGGATTTTCCAAGGATGTCATTTCGAGAGAGTCTGGCTTTGCTGGTCTGGTAAATCGTAGATTTTCCTCTACTATTTGTGGATTGCTTTTGTTTTGTACAGTCTTTGTTTCCTGATAGTTCTGTCTGATGGGGGAAAAGAGGCCTATTTGTCTTCATATAAAGAGCTTACAGAAATATATAGCCTCCAACCATCAAGTCTATACTACTAGCTGAATTTAAGGGAGGAGATCGTTGCTTGGGTCGGTTTATAAGAATCCTAGAAGTTTGGTATAATTTAGAAGTCATCTCGTCTATTGCAAGTGTTTTTTATATCTCTATTATGAAGTATATTACTGCTTCTGTGTTTGGTTTTGGCTACTCACATAAA

mRNA sequence

GTGATGAAGGAATGAATACGCGAAAAGAAGAGTGAAACGCAAACCTCAGAAATTCCCATTCCTTCTTCTTCTCTTCCTCTTGCAGCCTCCAGGCTTTGCCTCTGTTCTTGCGCCGTTCTTCTCTGCCGCCTTCTTCAACCTCAAAATTCCCAATTCCTCTCTGTCTTCTTCTCCATTTTCCATTTCCGCCATGACCCTTTCTCTCTCTTCCCCTTTCTCTCTCCTCCCCTTCATCCTCTTCTTCTTCGCCTCCCCTCTCATCGCCGCTCCTGACCCATCCACCATTTACGACCATCTCCAACTTCACGGCCTCCCCATCGGCCTCCTCCCCAAGAACATCACCAGATTCTCAATCGATTCTTCCACCGGACGTTTCCAGGTCTTCCTCGACCAACCCTGCAATGCCAAGTTTGAGAATGAGGTTCATTATGATTTCAACGTCTCCGGCAGGCTCACCTACGGCCAGATCGCTGAATTGGCCGGAATTTCCTCCCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCCCACTTCTGGTGTAATTCATTTCGACGTCGGTGTTGTTGACAAGCAATTCTCTCTTTCCCTCTTTGAGTCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCAATCCTTCGCCTTCGATGGAGCCTCTCTCGATTTGGATGGGCCTTTTTCGACGAAGGAAGCACAGAATCTCCAGCTTGAAGACAGTGAACTAAGGGCAACCTCATAGATTAGCGACAAAGAAATGTTGTGGATTTTCCAAGGATGTCATTTCGAGAGAGTCTGGCTTTGCTGGTCTGGTAAATCGTAGATTTTCCTCTACTATTTGTGGATTGCTTTTGTTTTGTACAGTCTTTGTTTCCTGATAGTTCTGTCTGATGGGGGAAAAGAGGCCTATTTGTCTTCATATAAAGAGCTTACAGAAATATATAGCCTCCAACCATCAAGTCTATACTACTAGCTGAATTTAAGGGAGGAGATCGTTGCTTGGGTCGGTTTATAAGAATCCTAGAAGTTTGGTATAATTTAGAAGTCATCTCGTCTATTGCAAGTGTTTTTTATATCTCTATTATGAAGTATATTACTGCTTCTGTGTTTGGTTTTGGCTACTCACATAAA

Coding sequence (CDS)

ATGACCCTTTCTCTCTCTTCCCCTTTCTCTCTCCTCCCCTTCATCCTCTTCTTCTTCGCCTCCCCTCTCATCGCCGCTCCTGACCCATCCACCATTTACGACCATCTCCAACTTCACGGCCTCCCCATCGGCCTCCTCCCCAAGAACATCACCAGATTCTCAATCGATTCTTCCACCGGACGTTTCCAGGTCTTCCTCGACCAACCCTGCAATGCCAAGTTTGAGAATGAGGTTCATTATGATTTCAACGTCTCCGGCAGGCTCACCTACGGCCAGATCGCTGAATTGGCCGGAATTTCCTCCCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCCCACTTCTGGTGTAATTCATTTCGACGTCGGTGTTGTTGACAAGCAATTCTCTCTTTCCCTCTTTGAGTCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCAATCCTTCGCCTTCGATGGAGCCTCTCTCGATTTGGATGGGCCTTTTTCGACGAAGGAAGCACAGAATCTCCAGCTTGAAGACAGTGAACTAAGGGCAACCTCATAG

Protein sequence

MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS

Homology

[Close]

BLAST of Lsi11G009660 vs. ExPASy TrEMBL
Match: A0A1S3B435 (uncharacterized protein LOC103485796 OS=Cucumis melo OX=3656 GN=LOC103485796 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.4e-88
Identity = 168/187 (89.84%), Postives = 172/187 (91.98%), Query Frame = 0


Query: 1   MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTG 60
           MTL L SPF    F   FFASPLIAAPDPSTIYDHL LHGLPIGLLPKNIT+FSIDSSTG
Sbjct: 1   MTLFLFSPFFF--FFFIFFASPLIAAPDPSTIYDHLHLHGLPIGLLPKNITKFSIDSSTG 60

Query: 61  RFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTS 120
           RF VFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGIRVDL +S
Sbjct: 61  RFHVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSSS 120

Query: 121 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLED 180
           GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAF+ ASLD D PFSTKEAQNLQLED
Sbjct: 121 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFNAASLDTDRPFSTKEAQNLQLED 180

Query: 181 SELRATS 188
           SELRATS
Sbjct: 181 SELRATS 185

[Close]

BLAST of Lsi11G009660 vs. ExPASy TrEMBL
Match: A0A0A0LN19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G99990 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.2e-80
Identity = 159/189 (84.13%), Postives = 168/189 (88.89%), Query Frame = 0


Query: 1   MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTG 60
           MTL L SPF +   ILFFFASP I A DPSTIYDHL L+GLPIGLLPKNIT+FSIDSSTG
Sbjct: 24  MTLFLFSPFFI---ILFFFASPFITASDPSTIYDHLHLYGLPIGLLPKNITKFSIDSSTG 83

Query: 61  RFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTS 120
           RFQVFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGIRVDL TS
Sbjct: 84  RFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSTS 143

Query: 121 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQ--NLQL 180
           G+IHFDVGVVDKQFSLSLFESP DCTAADPVD+S AF+ ASLD+D P STKE Q  N QL
Sbjct: 144 GLIHFDVGVVDKQFSLSLFESPIDCTAADPVDRSIAFNAASLDMDRPLSTKEDQRHNPQL 203

Query: 181 EDSELRATS 188
           E SELRA+S
Sbjct: 204 EVSELRASS 209

[Close]

BLAST of Lsi11G009660 vs. ExPASy TrEMBL
Match: A0A6J1G2H3 (uncharacterized protein LOC111450229 OS=Cucurbita moschata OX=3662 GN=LOC111450229 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.2e-80
Identity = 154/169 (91.12%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTG 60
           M LS+SSPFSLL FIL FFASPLIAAP+P+TIYDHL  HGLPIGLLPKNITRFSIDSSTG
Sbjct: 1   MILSISSPFSLLSFIL-FFASPLIAAPEPATIYDHLHRHGLPIGLLPKNITRFSIDSSTG 60

Query: 61  RFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTS 120
           RFQVFLDQPCNAKFENEVHYDFNVSGRL YGQIAELAGISSQELFLWFPVKGIRVDL TS
Sbjct: 61  RFQVFLDQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTS 120

Query: 121 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFS 170
           GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQS A DG SL LDG FS
Sbjct: 121 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSVALDGVSLGLDGAFS 168

[Close]

BLAST of Lsi11G009660 vs. ExPASy TrEMBL
Match: A0A6J1GC72 (uncharacterized protein LOC111452833 OS=Cucurbita moschata OX=3662 GN=LOC111452833 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.2e-79
Identity = 152/177 (85.88%), Postives = 159/177 (89.83%), Query Frame = 0


Query: 11  LLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPC 70
           LL   L FFASPL+AA DPSTIYDHL LHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPC
Sbjct: 3   LLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPC 62

Query: 71  NAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTSGVIHFDVGVV 130
           NAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGI VDL +SG+IHFDVGVV
Sbjct: 63  NAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVV 122

Query: 131 DKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS 188
           DKQFSLSLFESPPDCTAADPVD SF  +GAS+DL+   S  EAQNLQLED ELRA S
Sbjct: 123 DKQFSLSLFESPPDCTAADPVDHSFELNGASVDLNVAISMSEAQNLQLEDRELRAAS 179

[Close]

BLAST of Lsi11G009660 vs. ExPASy TrEMBL
Match: A0A6J1K9Y4 (uncharacterized protein LOC111492997 OS=Cucurbita maxima OX=3661 GN=LOC111492997 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.6e-79
Identity = 151/177 (85.31%), Postives = 159/177 (89.83%), Query Frame = 0


Query: 11  LLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPC 70
           LL   L FFASPL+AA DPSTIYDHL LHGLPIGLLPK+ITRFSIDSSTGRFQVFLDQPC
Sbjct: 3   LLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKDITRFSIDSSTGRFQVFLDQPC 62

Query: 71  NAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTSGVIHFDVGVV 130
           NAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGI VDL +SG+IHFDVGVV
Sbjct: 63  NAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVV 122

Query: 131 DKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS 188
           DKQFSLSLFESPPDCTAADPVD SF  +GAS+DL+   S  EAQNLQLED ELRA S
Sbjct: 123 DKQFSLSLFESPPDCTAADPVDHSFELNGASVDLNVAISMSEAQNLQLEDRELRAAS 179

[Close]

BLAST of Lsi11G009660 vs. NCBI nr
Match: XP_038891231.1 (uncharacterized protein LOC120080586 [Benincasa hispida])

HSP 1 Score: 357.5 bits (916), Expect = 7.2e-95
Identity = 178/187 (95.19%), Postives = 180/187 (96.26%), Query Frame = 0


Query: 1   MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTG 60
           MTLSLSS FSLLPFILFFFASPLIAAPDPSTIYDHL LHGLPIGLLPKNITRFSIDSSTG
Sbjct: 1   MTLSLSSTFSLLPFILFFFASPLIAAPDPSTIYDHLHLHGLPIGLLPKNITRFSIDSSTG 60

Query: 61  RFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTS 120
           RFQVFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGIRVDLPTS
Sbjct: 61  RFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLPTS 120

Query: 121 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLED 180
           GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSF F+GASLD  GPFS  EAQNLQLED
Sbjct: 121 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFVFNGASLDFVGPFSPMEAQNLQLED 180

Query: 181 SELRATS 188
           SELRATS
Sbjct: 181 SELRATS 187

[Close]

BLAST of Lsi11G009660 vs. NCBI nr
Match: XP_008441719.1 (PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo])

HSP 1 Score: 333.6 bits (854), Expect = 1.1e-87
Identity = 168/187 (89.84%), Postives = 172/187 (91.98%), Query Frame = 0


Query: 1   MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTG 60
           MTL L SPF    F   FFASPLIAAPDPSTIYDHL LHGLPIGLLPKNIT+FSIDSSTG
Sbjct: 1   MTLFLFSPFFF--FFFIFFASPLIAAPDPSTIYDHLHLHGLPIGLLPKNITKFSIDSSTG 60

Query: 61  RFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTS 120
           RF VFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGIRVDL +S
Sbjct: 61  RFHVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSSS 120

Query: 121 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLED 180
           GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAF+ ASLD D PFSTKEAQNLQLED
Sbjct: 121 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFNAASLDTDRPFSTKEAQNLQLED 180

Query: 181 SELRATS 188
           SELRATS
Sbjct: 181 SELRATS 185

[Close]

BLAST of Lsi11G009660 vs. NCBI nr
Match: XP_022946011.1 (uncharacterized protein LOC111450229 [Cucurbita moschata])

HSP 1 Score: 307.4 bits (786), Expect = 8.6e-80
Identity = 154/169 (91.12%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTG 60
           M LS+SSPFSLL FIL FFASPLIAAP+P+TIYDHL  HGLPIGLLPKNITRFSIDSSTG
Sbjct: 1   MILSISSPFSLLSFIL-FFASPLIAAPEPATIYDHLHRHGLPIGLLPKNITRFSIDSSTG 60

Query: 61  RFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTS 120
           RFQVFLDQPCNAKFENEVHYDFNVSGRL YGQIAELAGISSQELFLWFPVKGIRVDL TS
Sbjct: 61  RFQVFLDQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTS 120

Query: 121 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFS 170
           GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQS A DG SL LDG FS
Sbjct: 121 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSVALDGVSLGLDGAFS 168

[Close]

BLAST of Lsi11G009660 vs. NCBI nr
Match: XP_004138912.1 (uncharacterized protein LOC101222871 [Cucumis sativus] >KGN61366.1 hypothetical protein Csa_005959 [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 8.6e-80
Identity = 159/189 (84.13%), Postives = 168/189 (88.89%), Query Frame = 0


Query: 1   MTLSLSSPFSLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTG 60
           MTL L SPF +   ILFFFASP I A DPSTIYDHL L+GLPIGLLPKNIT+FSIDSSTG
Sbjct: 24  MTLFLFSPFFI---ILFFFASPFITASDPSTIYDHLHLYGLPIGLLPKNITKFSIDSSTG 83

Query: 61  RFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTS 120
           RFQVFLDQPCNAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGIRVDL TS
Sbjct: 84  RFQVFLDQPCNAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSTS 143

Query: 121 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQ--NLQL 180
           G+IHFDVGVVDKQFSLSLFESP DCTAADPVD+S AF+ ASLD+D P STKE Q  N QL
Sbjct: 144 GLIHFDVGVVDKQFSLSLFESPIDCTAADPVDRSIAFNAASLDMDRPLSTKEDQRHNPQL 203

Query: 181 EDSELRATS 188
           E SELRA+S
Sbjct: 204 EVSELRASS 209

[Close]

BLAST of Lsi11G009660 vs. NCBI nr
Match: XP_022949506.1 (uncharacterized protein LOC111452833 [Cucurbita moschata] >XP_023524763.1 uncharacterized protein LOC111788601 [Cucurbita pepo subsp. pepo] >KAG6607127.1 hypothetical protein SDJN03_00469, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.8 bits (782), Expect = 2.5e-79
Identity = 152/177 (85.88%), Postives = 159/177 (89.83%), Query Frame = 0


Query: 11  LLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPC 70
           LL   L FFASPL+AA DPSTIYDHL LHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPC
Sbjct: 3   LLLAFLLFFASPLMAASDPSTIYDHLHLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPC 62

Query: 71  NAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTSGVIHFDVGVV 130
           NAKFENEVHYDFNVSGRL+YGQIAELAGISSQELFLWFPVKGI VDL +SG+IHFDVGVV
Sbjct: 63  NAKFENEVHYDFNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVV 122

Query: 131 DKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLEDSELRATS 188
           DKQFSLSLFESPPDCTAADPVD SF  +GAS+DL+   S  EAQNLQLED ELRA S
Sbjct: 123 DKQFSLSLFESPPDCTAADPVDHSFELNGASVDLNVAISMSEAQNLQLEDRELRAAS 179

[Close]

BLAST of Lsi11G009660 vs. TAIR 10
Match: AT5G16380.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 165.2 bits (417), Expect = 4.9e-41
Identity = 89/186 (47.85%), Postives = 122/186 (65.59%), Query Frame = 0


Query: 5   LSSPFSLLPFILFFFAS----PLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTG 64
           + S   L   I+  F+S     L + PDPS  YD+L+   LP G++PK +T FSID  TG
Sbjct: 1   MGSSQDLFFLIIVLFSSILFPQLSSLPDPS-FYDYLRESNLPAGIVPKGVTNFSIDIKTG 60

Query: 65  RFQVFLDQPCNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTS 124
           RF V L  PC+AKFEN+ H+D+N+SG L+ G+I  L+G++ +ELFLWF VKGI VD  +S
Sbjct: 61  RFTVALPVPCDAKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSS 120

Query: 125 GVIHFDVGVVDKQFSLSLFESPPDCTAADPVDQSFAFDGASLDLDGPFSTKEAQNLQLED 184
           G+IHFDVGV DKQ SLSLFESP DCTAA+   +       ++DL  P      ++L+ + 
Sbjct: 121 GLIHFDVGVADKQLSLSLFESPRDCTAAESQPR-------AVDLSRP------RDLEKQS 172

Query: 185 SELRAT 187
            E+++T
Sbjct: 181 EEMQST 172

[Close]

BLAST of Lsi11G009660 vs. TAIR 10
Match: AT3G07470.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 164.5 bits (415), Expect = 8.4e-41
Identity = 72/121 (59.50%), Postives = 95/121 (78.51%), Query Frame = 0


Query: 25  AAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNV 84
           A  +  TIY+ L  +GLP G+ PK +  F+ D  TGRF V+L+Q C AK+E E+HYD N+
Sbjct: 24  AISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETEIHYDANI 83

Query: 85  SGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFESPPD 144
           +G +   QI++L+GIS+QELFLWFPVKGIRVD+P+SG+I+FDVGVV KQ+SLSLFE+P D
Sbjct: 84  TGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRD 143

Query: 145 C 146
           C
Sbjct: 144 C 144

[Close]

BLAST of Lsi11G009660 vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 152.5 bits (384), Expect = 3.3e-37
Identity = 74/138 (53.62%), Postives = 99/138 (71.74%), Query Frame = 0


Query: 10  SLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQP 69
           +LL F+L    S      +  +I + L  +GLP+GL PK +  F+++  TGRF V+L+Q 
Sbjct: 8   TLLCFVLAAGISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQS 67

Query: 70  CNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTSGVIHFDVGV 129
           C AK+E E+HYD  VSG + Y QI +L+GIS+QELFLW  VKGIRVD+P+SG+I FDVGV
Sbjct: 68  CQAKYETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGV 127

Query: 130 VDKQFSLSLFESPPDCTA 148
           + KQ+SLSLFE+P DC A
Sbjct: 128 LRKQYSLSLFETPRDCVA 145

[Close]

BLAST of Lsi11G009660 vs. TAIR 10
Match: AT3G07460.2 (Protein of unknown function, DUF538 )

HSP 1 Score: 152.5 bits (384), Expect = 3.3e-37
Identity = 74/138 (53.62%), Postives = 99/138 (71.74%), Query Frame = 0


Query: 10  SLLPFILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQP 69
           +LL F+L    S      +  +I + L  +GLP+GL PK +  F+++  TGRF V+L+Q 
Sbjct: 8   TLLCFVLAAGISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQS 67

Query: 70  CNAKFENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTSGVIHFDVGV 129
           C AK+E E+HYD  VSG + Y QI +L+GIS+QELFLW  VKGIRVD+P+SG+I FDVGV
Sbjct: 68  CQAKYETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGV 127

Query: 130 VDKQFSLSLFESPPDCTA 148
           + KQ+SLSLFE+P DC A
Sbjct: 128 LRKQYSLSLFETPRDCVA 145

[Close]

BLAST of Lsi11G009660 vs. TAIR 10
Match: AT1G61667.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 60/131 (45.80%), Postives = 82/131 (62.60%), Query Frame = 0


Query: 15  ILFFFASPLIAAPDPSTIYDHLQLHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKF 74
           +L     P I     S+I + L+  GLP GL P N+  +S+D  TG  +V L  PC A+F
Sbjct: 5   LLLLLLVPFITPSSQSSIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNPCFARF 64

Query: 75  ENEVHYDFNVSGRLTYGQIAELAGISSQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQF 134
           EN V++D  +   L+YG +  L G++ +ELFLW PVKGI V+ P+SG++ FD+GV  KQ 
Sbjct: 65  ENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVAHKQI 124

Query: 135 SLSLFESPPDC 146
           S SLFE PP C
Sbjct: 125 SRSLFEDPPVC 135

The following BLAST results are available for this feature:

BLAST of Lsi11G009660 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi11G009660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B435	5.4e-88	89.84	uncharacterized protein LOC103485796 OS=Cucumis melo OX=3656 GN=LOC103485796 PE=...	[more]
A0A0A0LN19	4.2e-80	84.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G99990 PE=4 SV=1	[more]
A0A6J1G2H3	4.2e-80	91.12	uncharacterized protein LOC111450229 OS=Cucurbita moschata OX=3662 GN=LOC1114502...	[more]
A0A6J1GC72	1.2e-79	85.88	uncharacterized protein LOC111452833 OS=Cucurbita moschata OX=3662 GN=LOC1114528...	[more]
A0A6J1K9Y4	4.6e-79	85.31	uncharacterized protein LOC111492997 OS=Cucurbita maxima OX=3661 GN=LOC111492997...	[more]

BLAST of Lsi11G009660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891231.1	7.2e-95	95.19	uncharacterized protein LOC120080586 [Benincasa hispida]	[more]
XP_008441719.1	1.1e-87	89.84	PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo]	[more]
XP_022946011.1	8.6e-80	91.12	uncharacterized protein LOC111450229 [Cucurbita moschata]	[more]
XP_004138912.1	8.6e-80	84.13	uncharacterized protein LOC101222871 [Cucumis sativus] >KGN61366.1 hypothetical ...	[more]
XP_022949506.1	2.5e-79	85.88	uncharacterized protein LOC111452833 [Cucurbita moschata] >XP_023524763.1 unchar...	[more]

BLAST of Lsi11G009660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16380.1	4.9e-41	47.85	Protein of unknown function, DUF538	[more]
AT3G07470.1	8.4e-41	59.50	Protein of unknown function, DUF538	[more]
AT3G07460.1	3.3e-37	53.62	Protein of unknown function, DUF538	[more]
AT3G07460.2	3.3e-37	53.62	Protein of unknown function, DUF538	[more]
AT1G61667.1	1.3e-30	45.80	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 23..151 e-value: 2.6E-33 score: 116.6
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 9..147
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 32..140 e-value: 1.0E-30 score: 106.5
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 15..163
None	No IPR available	PANTHER	PTHR31676:SF115	PROTEIN, PUTATIVE-RELATED	coord: 15..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G009660.1	Lsi11G009660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane