Lsi11G008590 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G008590
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	U3 small nucleolar RNA-associated protein 11
Location	chr11: 10879051 .. 10883437 (-)
RNA-Seq Expression	Lsi11G008590
Synteny	Lsi11G008590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAAACAAAAGAAAAAACCCTACAACCCTTTGATCTTCCTTTCACTCTCGCTCTCACGTGCTCCATCTCCTTCTTCTTCACGCCGGCTCCTCCTCCCTTTCAGCAGTATAGTGTCGCCGCCGCCGTCTTCTTCCGCTGCGTCCCTCCGCCTTCCGCCGCTTCTTACGTAATTTTTGCTTTTATCTGTTATCATTCTCAAAGAAGTAGAAAACACATGCAAATGTGCAAAAACCCTAAAAAATTCATGTTCTTTGTCGAATAGCATTGCTCTGAATACTACCTGTGAAAGCAGAAATTCAATCCCGCTTTCGTCTTCCCTTAAACATATCCAACTGTAAAATTTGTTAGTCTTCATTCTCATCTGTTAGAATTTCAACTTTTTTTTTTTCTTCTTTTTCTAAACCTATCGATAGATGCGGATTTCTCTGGTTTAGGGATTGGGTATTTTAGTTGCTATTTAAAAGGGTGTTCTCTTAATGGAAACTTTGAATTTCATCTATGATTTCTGGAATTTGGGTTGACTGGCTTCTTAATACTGACTTATGCCATTGTTTATGTTTTGGGTGTAGGGAAACTAAGACTTAGAGGTCATTATTTGGTTGTACTTGCACATCGGTTTTTTGCTTTCTTATTGATTGCAATGTCGTCCCTAAAGAATGCGGTTCCTAGACGGCCTTACAAGGAGCGAGCTCAGCCGTAAGTGATTAGGCTTTTTCATGTTTTTTTTTTTTTTTTAAAAAAAGAAATTCCAATGTCTGACCTTTTATTGGCGATTCATTAGGCATTCTCGGAAAAAATTTGGGCTTCTTGAGAAGCACAAAGATTATATCGAGCGTGCTAAGGCTTTTCATAAGAAGGAAGATACTTTACGGGTACAGTTTGAAATGCACATACTTCTTCTGTTTTTTAATGCAAAGTGAAGGCAATTTTCTGTTGTTTATTGCATTCTATCGACATTTCCTTGATTTGGTTGTTCTGTATTTTTTGTTGTTTGATTTTCAGAAACTTAAAGAGAAAGCAGCCTTCAAGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTGATGGAGTTCATAAACCAGAGTAATCATCTTAGATGATTTCTAGCATCAGATGAATTTCAGCTCTTCTTTTTGTTTCCTTATGTCTCTTAATCTTTATATGTTGTGTAGGAGTCATGTAAATAAGTATACTGCAGAGCAACTCATGCTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAATGCAGAGTGAGAAAAGGGTGGGTTCTTTCACTCCTTTATTGACAAGGATTCCTTTGAAGAACTCGTTGATTTATTACTTTAACTAATATATCAAACTTGCACTCTTCTGTACAGAAAATTGAAAAACTGACGGCAACGTTGCATTCACTTGATAATCAACCATCAAATAAGCATCTTTACTATGTCGAAGACAGGTTTGAGCACAATTTGAAACTTTTTCCACTTTTCTAGATGAAGATGCATCAAATAATTCTTGGTCTGTTAACAAATGGGTGGAATCATATAATGACCACCTGTAGTTCCTATTCTTTTGGTTTTAAACAAGAGCATCAGAAATGCAGTAACATCCATAAGATAAACATATACTAAGGCTTTTTTTGCACTAAAGATAAATATATACCAAAGAACATTTGATACTGTTGCCTTATGTCATCTTACAAAAACACATTCAACCTTTTTATTTTCCTTAAATTTTTGGTGAACCTGACTCATTTTCTCCCTGCACATTCTAATGCAGTGAAGTTATTTATGTTAATAAATCATTGTCGATTACGTGCAGGGAGGAAGCCAATGAAATTCTATCTTGTTCTTCTAAAGGATTGGTGGCATCTTCTGAGACAGTTCCTGATAGTATTAAAAGGTAACATTATTACTCGGGATACATGTGAATCTTTTTATTTAGAAGCAGGGCACTTCTACTTGATGCTTAGGAGTTCACATAAATCCTCTTTGATTATAGTTTATTACTTGGGTCAAATGAATTTCAGGGGAAAGCCCCAACTGGAACAAAATGATTTAGCAAACAAATAAACTTTTTCTCACTCCTTCACCTCCATTGAATATTTCCCACTCTTTAATGACATCCCCTGTAGATTGTAAGTAAAAAAATTGAGTTCATTTGTGGAATATCGACAATTGTGTTCCATCCAATGCAGTTATGCTGAATTTACATACGTATAATGAAAAAAGAAAGGTGTGGCTTTTAATAATATGTGAGGTAGTTGCGTTTACATTTGATTTTTTTTAGTAATTGGACATTTGGGATAGATTCATCTGCAATATCATGTGGATACTTTCAAATTGAAATAGTGTGTCTCTGTAGTTTTTACCTTGCATGATGTTGGTGTAGGCCAAAATTCTTGACATTGGGTTTTTACAATGATTGTCAGAGAATATTTACTTGAAACTTCATTTTGGATGCTCGTGTTTATAAGCTTGAGAATATTACCTAGAACTGGAGTGATGAATCGTCAGTAGAAAGAAAAATGTTTTCTCACTTCCAGAGTATCCCATTATGAGTGCTTTACAAATTTACAGGAATATATTTAGTAATGGAGTTTGAACACATGCTTTATTCTTCATTGAAGGTAACGGTTCTGCATGTTGAAGCATAGGTTCCTTATCTGATTATTACCCGATGATTATGATTAAGAGGTTCAATTTCTCACTTAGCAAGTGATGTATATTTTACTTAGCAGAGAGACTTTCATTTGCAATGCTCGAGAGTGTTGCCTGATTTGTGTGGTTTCCTTCTTTTGGTTAGTGATGCTCTTTTTCTGCACACAGGAAAACCATTGCTTCTTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTCAGTGAATTAGAGAAACTTTATATGGATATGACACTGCAACAAGAATTAAGGGTACTTTCTAATGTGTGCTTTTAGCTGTTCAAGTTTGGTGGACGGATAGATTGTGTGTTAAAATGATTATTGAATGTGATATGTGATACATGCTTATAACAGAAAAAGGGTCGCAAACGTAAACTCCGGGAAGATGAACTTGCCAATCCGACTTCAAAACCTGTATATAGATGGCGGGCAGAACGGAAGCGCTAAAAGGTTTAATAATTTTGCTTTCTCTATATAAAGTTTGTTTTTTCTTAAAAAAGAATTGCTATGTTTAGGCAATATCAGATTGCCCAAGTTAGAAGTTTTGTTATTTGATGTTGCTTTGCGATGGTGCATTGCTAGGGAAAGAGATTAAGTAGTGTGTTTGTAATAACTTTTGGAAAAATGTTTTTTAAACTATGTCATTTTTCCTATAAGAGTACCTTTGAAAAATTAATACTTTAAAATGTGTTTAAGAGAGGATTTTAAGAGGTTGATTGACCCTCGGGTGAGGTGCAGTCCCTTGTTAGATAGCATGCTTCTTTGTAGGACCCCGAGGGTAAAATTTTTTGTAATTGCCTGTTATGCCTTATTTTGCTTGGGTTTAGTCCTTTCTTCAAATTATGTATTAAAAGAAAACATACTTGTAACTAATAGATCCAATTGAAAAATTGGTTTGAACATTTTTTTTTGGGAAAAAAAAGTGGTAGATGGTATTCCAAATGGACCTAGGTTGCCATACCATAATTTCTAGTTAGTGGTGTGCTATTATTGCAATTTCTTTTGCTCTGTTAGATTGTCTTCATCATTTGAACATTGTGCACCAGTCTAGTGATTTTTTTTCCTATTTGGGTTCTGTACTTTGATTACAACTCTCAAGAATTGAAAAACCTGAAAAACTTTAGAACCATAAAAGAATGCGATTATTTTTAATTTCATATTACAGAATGACCACTTCAAATTTCCCAAATTGCTCTTGTATTCTTATTGTGGTTGATTATAGAATTTGCCTCTTTGTTTTCAGTCCCTTGCCCAAGCATATTTTGCAAGATGTAGTTGCAACTTCCAAGGAAACTGGATGAAGCATTGTTTACCATGCAAATCCTTCGAAAAGTTGGCTGAAATCACACAGGGACCTCATTCTGGTTCGTTGTTTCGGTTTGCAAATTTTGTTTTCACAGCTAATTAGTTAAATCATGCTGTGTTTCTTCTGGGATGAAGAATGTCATCAGTTTGTTGTTACTGTTATTTACTGAGGACTATAGCTTTTTTTTGTTTTGTTTTGTTTTTTTTCCCTTAACAATGTGTGGGATGGAGAAATGGAACTTCTAATTTCGAGATTGATAGTACGATATGTTAGTAGAATTGTGCTCATGTTGTCTATTGAGAAATATAGTGTGATTCAAGTTAAAAGATCTGTCAAGTACTTTGAATAGAGAACGAAAAGAGGCATTAAGGGTGATGAAAAATGCATCGCTATCTCTTTCTTTT

mRNA sequence

GAAAAAAACAAAAGAAAAAACCCTACAACCCTTTGATCTTCCTTTCACTCTCGCTCTCACGTGCTCCATCTCCTTCTTCTTCACGCCGGCTCCTCCTCCCTTTCAGCAGTATAGTGTCGCCGCCGCCGTCTTCTTCCGCTGCGTCCCTCCGCCTTCCGCCGCTTCTTACGTAATTTTTGCTTTTATCTGTTATCATTCTCAAAGAAGTAGAAAACACATGCAAATGTGCAAAAACCCTAAAAAATTCATGTTCTTTGTCGAATAGCATTGCTCTGAATACTACCTGTGAAAGCAGAAATTCAATCCCGCTTTCGTCTTCCCTTAAACATATCCAACTGTAAAATTTGGAAACTAAGACTTAGAGGTCATTATTTGGTTGTACTTGCACATCGGTTTTTTGCTTTCTTATTGATTGCAATGTCGTCCCTAAAGAATGCGGTTCCTAGACGGCCTTACAAGGAGCGAGCTCAGCCGCATTCTCGGAAAAAATTTGGGCTTCTTGAGAAGCACAAAGATTATATCGAGCGTGCTAAGGCTTTTCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCCTTCAAGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTGATGGAGTTCATAAACCAGAGAGTCATGTAAATAAGTATACTGCAGAGCAACTCATGCTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAATGCAGAGTGAGAAAAGGAAAATTGAAAAACTGACGGCAACGTTGCATTCACTTGATAATCAACCATCAAATAAGCATCTTTACTATGTCGAAGACAGGGAGGAAGCCAATGAAATTCTATCTTGTTCTTCTAAAGGATTGGTGGCATCTTCTGAGACAGTTCCTGATAGTATTAAAAGGAAAACCATTGCTTCTTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTCAGTGAATTAGAGAAACTTTATATGGATATGACACTGCAACAAGAATTAAGGAAAAAGGGTCGCAAACGTAAACTCCGGGAAGATGAACTTGCCAATCCGACTTCAAAACCTTCCCTTGCCCAAGCATATTTTGCAAGATGTAGTTGCAACTTCCAAGGAAACTGGATGAAGCATTGTTTACCATGCAAATCCTTCGAAAAGTTGGCTGAAATCACACAGGGACCTCATTCTGGTTCGTTGTTTCGGTTTGCAAATTTTGTTTTCACAGCTAATTAGTTAAATCATGCTGTGTTTCTTCTGGGATGAAGAATGTCATCAGTTTGTTGTTACTGTTATTTACTGAGGACTATAGCTTTTTTTTGTTTTGTTTTGTTTTTTTTCCCTTAACAATGTGTGGGATGGAGAAATGGAACTTCTAATTTCGAGATTGATAGTACGATATGTTAGTAGAATTGTGCTCATGTTGTCTATTGAGAAATATAGTGTGATTCAAGTTAAAAGATCTGTCAAGTACTTTGAATAGAGAACGAAAAGAGGCATTAAGGGTGATGAAAAATGCATCGCTATCTCTTTCTTTT

Coding sequence (CDS)

ATGTCGTCCCTAAAGAATGCGGTTCCTAGACGGCCTTACAAGGAGCGAGCTCAGCCGCATTCTCGGAAAAAATTTGGGCTTCTTGAGAAGCACAAAGATTATATCGAGCGTGCTAAGGCTTTTCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCCTTCAAGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTGATGGAGTTCATAAACCAGAGAGTCATGTAAATAAGTATACTGCAGAGCAACTCATGCTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAATGCAGAGTGAGAAAAGGAAAATTGAAAAACTGACGGCAACGTTGCATTCACTTGATAATCAACCATCAAATAAGCATCTTTACTATGTCGAAGACAGGGAGGAAGCCAATGAAATTCTATCTTGTTCTTCTAAAGGATTGGTGGCATCTTCTGAGACAGTTCCTGATAGTATTAAAAGGAAAACCATTGCTTCTTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTCAGTGAATTAGAGAAACTTTATATGGATATGACACTGCAACAAGAATTAAGGAAAAAGGGTCGCAAACGTAAACTCCGGGAAGATGAACTTGCCAATCCGACTTCAAAACCTTCCCTTGCCCAAGCATATTTTGCAAGATGTAGTTGCAACTTCCAAGGAAACTGGATGAAGCATTGTTTACCATGCAAATCCTTCGAAAAGTTGGCTGAAATCACACAGGGACCTCATTCTGGTTCGTTGTTTCGGTTTGCAAATTTTGTTTTCACAGCTAATTAG

Protein sequence

MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATLHSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKPSLAQAYFARCSCNFQGNWMKHCLPCKSFEKLAEITQGPHSGSLFRFANFVFTAN

Homology

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BLAST of Lsi11G008590 vs. ExPASy Swiss-Prot
Match: Q8S1Z1 (Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0810000 PE=2 SV=2)

HSP 1 Score: 282.7 bits (722), Expect = 4.3e-75
Identity = 144/219 (65.75%), Postives = 178/219 (81.28%), Query Frame = 0


Query: 1   MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSL+NA+ RR +KERAQP SRKKFGLLEKHKDYI RAKAFH+KE+T+RKLKEKA+F+NP
Sbjct: 1   MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQKEETIRKLKEKASFRNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120
           DEFYFKMI ++TVDG+H+P+   NKYT ++LML+KT+D GYILQ +QSEK+KIEKL++ L
Sbjct: 61  DEFYFKMINSKTVDGIHRPKPEANKYTEDELMLLKTKDMGYILQGIQSEKKKIEKLSSML 120

Query: 121 HSLDNQPSNKHLYYVEDREEANEILS-CSSKGLVASSETVPDSIKRKTIASYKELEARRS 180
           H LDN+  NKH+Y+ EDREE  EI S    K      + +P  IKRKT +SY+ELE R+ 
Sbjct: 121 HELDNKRPNKHVYFAEDREEVKEIQSRIEQKSSSLGLDNIPSRIKRKTASSYRELEERKQ 180

Query: 181 RVSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKP 219
           RV +LEKLY DM LQ+EL+K GRKRKLREDE+ N TS+P
Sbjct: 181 RVQKLEKLYADMALQKELKKPGRKRKLREDEIENQTSRP 219

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BLAST of Lsi11G008590 vs. ExPASy Swiss-Prot
Match: Q9M223 (Probable U3 small nucleolar RNA-associated protein 11 OS=Arabidopsis thaliana OX=3702 GN=At3g60360 PE=1 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 6.7e-68
Identity = 133/218 (61.01%), Postives = 175/218 (80.28%), Query Frame = 0


Query: 1   MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSL+NA+PR  +KER+QP +RK+FG+LEKHKDYI RA A+HKK++TL+ L++KAAFKNP
Sbjct: 1   MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120
           DEF FKMI ++TVDG H+P+  VNKY+AE+LM+MKTQD GY+ QK QSEK KI+KLTA+L
Sbjct: 61  DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKNKIDKLTASL 120

Query: 121 HSLDNQPSNKHLYYVEDREEANEI-LSCSSKGLVASSETVPDSIKRKTIASYKELEARRS 180
               +Q S +H+YY EDREEA E+ +   SK  +++ E +P  IK+K   SY++LE R+S
Sbjct: 121 QCTGDQSSRRHVYYAEDREEARELEVQGRSKSDISTVE-IPKDIKKKMDRSYRDLEGRKS 180

Query: 181 RVSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSK 218
           R  +LEKLY DM++Q+EL+KKGRKRKLR+DEL NP  K
Sbjct: 181 RAKDLEKLYTDMSMQKELQKKGRKRKLRDDELLNPNGK 217

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BLAST of Lsi11G008590 vs. ExPASy Swiss-Prot
Match: Q55C50 (Probable U3 small nucleolar RNA-associated protein 11 OS=Dictyostelium discoideum OX=44689 GN=utp11 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.8e-28
Identity = 85/227 (37.44%), Postives = 129/227 (56.83%), Query Frame = 0


Query: 3   SLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDE 62
           +L+  +P+R  +ER QP S KK G LE+ KDY+ERAK ++ K DTL+KLK +AAFKNPDE
Sbjct: 5   NLRRLLPQRAKQERPQPESSKKKGFLERKKDYVERAKDYNNKRDTLKKLKLQAAFKNPDE 64

Query: 63  FYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATLHS 122
           F +KMI ++ VDGVH  E        EQ++ +KTQD  Y+  K +++ +KIE+L ATL  
Sbjct: 65  FNYKMISSKLVDGVHS-EISKTSLKKEQIIDIKTQDILYLQSKRRADDKKIERLQATLQY 124

Query: 123 LDN--QPSNKHLYYVEDREEAN----------------------EILSCSSKGLVASSET 182
           +D+  +P+ + +Y  +++E  N                      +I       LV + +T
Sbjct: 125 MDSGLEPTEQIIYVDDEKEVKNFSATKYFDTVPDAFNGSLSTIPKISKLKEGSLVVNPKT 184

Query: 183 VP--DSIKRKTIASYKELEARRSRVSELEKLYMDMTLQQELRKKGRK 204
            P    ++  T  SYKEL+ R+ R  +L K  MD++  +   K+G K
Sbjct: 185 APTLGQLEAMTATSYKELKERKLRRDQLFKAEMDLSKSKIQLKRGTK 230

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BLAST of Lsi11G008590 vs. ExPASy Swiss-Prot
Match: Q8R5K5 (Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus OX=10116 GN=Utp11 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-24
Identity = 67/158 (42.41%), Postives = 97/158 (61.39%), Query Frame = 0


Query: 10  RRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIR 69
           +R Y+ER+QP  RK  GLLEK KDY  RA  + KK++ L+ L++KA  KNPDEFY+KM R
Sbjct: 13  QREYRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTR 72

Query: 70  TRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATLHSLDNQ--P 129
            +  DGVH  +    + T EQL LM+TQD  YI  K  +E +KIE+L + LH LD Q   
Sbjct: 73  VKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query: 130 SNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKR 166
            N+H+++ + ++E  +        + A  +T P+ + R
Sbjct: 133 QNRHVFFFDTKKEVEQF------DVAAHLQTAPELVDR 164

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BLAST of Lsi11G008590 vs. ExPASy Swiss-Prot
Match: Q9CZJ1 (Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus OX=10090 GN=Utp11 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.0e-24
Identity = 78/203 (38.42%), Postives = 115/203 (56.65%), Query Frame = 0


Query: 10  RRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIR 69
           +R ++ER+QP  RK+ GLLEK KDY  RA  +HKK+D LR L++KA  KNPDEFY+KM R
Sbjct: 13  QREHRERSQPGFRKRLGLLEKKKDYKLRANDYHKKQDFLRALRKKALEKNPDEFYYKMTR 72

Query: 70  TRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATLHSLDNQ--P 129
            +  DGVH  + +  + TAEQL LM+TQD  YI  K  +E +KIE+L + LH LD Q   
Sbjct: 73  AKLQDGVHIFKENKEEVTAEQLKLMRTQDIKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query: 130 SNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSRVSELEK- 189
             KH+++ + ++E           +    +T P+ + R            R R+  L+K 
Sbjct: 133 QKKHVFFFDTKKEVERF------DVATHLQTAPELVDR---------VYNRPRIETLQKE 192

Query: 190 LYMDMTLQQELRKKGRKRKLRED 210
                T Q  L++  ++R+ + D
Sbjct: 193 RVKGATPQTGLKRIAKERQKQYD 200

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BLAST of Lsi11G008590 vs. ExPASy TrEMBL
Match: A0A1S3B400 (U3 small nucleolar RNA-associated protein 11 OS=Cucumis melo OX=3656 GN=LOC103485902 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.3e-106
Identity = 207/218 (94.95%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPES VNKYTAEQLMLMKTQDAGYILQKMQSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESRVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSR 180
           HSLDNQPSNKHLY+ EDREEANEILS SSKGLVASSE VPDSI+RKT+ASYKELEARRSR
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTVASYKELEARRSR 180

Query: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKP 219
           VSELEKLYMDMTLQQELRKKGRKRKLREDE+ANPTSKP
Sbjct: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDEVANPTSKP 218

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BLAST of Lsi11G008590 vs. ExPASy TrEMBL
Match: A0A5A7TX11 (U3 small nucleolar RNA-associated protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001760 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.3e-106
Identity = 207/218 (94.95%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPES VNKYTAEQLMLMKTQDAGYILQKMQSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESRVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSR 180
           HSLDNQPSNKHLY+ EDREEANEILS SSKGLVASSE VPDSI+RKT+ASYKELEARRSR
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTVASYKELEARRSR 180

Query: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKP 219
           VSELEKLYMDMTLQQELRKKGRKRKLREDE+ANPTSKP
Sbjct: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDEVANPTSKP 218

[Close]

BLAST of Lsi11G008590 vs. ExPASy TrEMBL
Match: A0A0A0LKH7 (U3 small nucleolar RNA-associated protein 11 OS=Cucumis sativus OX=3659 GN=Csa_2G074140 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 6.4e-106
Identity = 205/218 (94.04%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSR 180
           HSLDNQPSNKHLY+ EDREEANEILS SSKGLVASSE VPDSI+RKTI+SYKELEARRSR
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180

Query: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKP 219
           V+ELEKLYMDMTLQQELRKKGRKRKLREDEL+NPT KP
Sbjct: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKP 218

[Close]

BLAST of Lsi11G008590 vs. ExPASy TrEMBL
Match: A0A6J1HNU6 (U3 small nucleolar RNA-associated protein 11 OS=Cucurbita maxima OX=3661 GN=LOC111465374 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 6.2e-101
Identity = 199/218 (91.28%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 1   MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLKNAVP+RPYKERAQP+SRKKFGLLEKHKDY+ERAKA+HKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120
           DEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAGYILQK+QSEKRKIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYYVEDREEANEILSCSSKG-LVASSETVPDSIKRKTIASYKELEARRS 180
           HSLDNQPSNKH+Y+ EDREEANEI S SSKG  VASSE VPDSIKRKTI+SYKELEARRS
Sbjct: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180

Query: 181 RVSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSK 218
           RVSELEKLYMDMTLQQEL KKGRKRKLREDEL NPTSK
Sbjct: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSK 218

[Close]

BLAST of Lsi11G008590 vs. ExPASy TrEMBL
Match: A0A6J1FGQ3 (U3 small nucleolar RNA-associated protein 11 OS=Cucurbita moschata OX=3662 GN=LOC111444029 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 6.2e-101
Identity = 199/219 (90.87%), Postives = 209/219 (95.43%), Query Frame = 0


Query: 1   MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLKNAVP+RPYKERAQP+SRKKFGLLEKHKDY+ERAKA+HKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120
           DEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAGYILQK+QSEKRKIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYYVEDREEANEILSCSSKG-LVASSETVPDSIKRKTIASYKELEARRS 180
           HSLDNQPSNKH+Y+ EDREEANEI S SSK   VASSE VPDSIKRKTI+SYKELEARRS
Sbjct: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRS 180

Query: 181 RVSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKP 219
           RVSELEKLYMDMTLQQEL KKGRKRKLREDEL NPTSKP
Sbjct: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKP 219

[Close]

BLAST of Lsi11G008590 vs. NCBI nr
Match: XP_008441892.1 (PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] >XP_008441893.1 PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] >XP_008441895.1 PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] >XP_008441896.1 PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] >XP_008441897.1 PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] >XP_016899516.1 PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] >KAA0047710.1 putative U3 small nucleolar RNA-associated protein 11 [Cucumis melo var. makuwa] >TYK08364.1 putative U3 small nucleolar RNA-associated protein 11 [Cucumis melo var. makuwa])

HSP 1 Score: 396.0 bits (1016), Expect = 2.7e-106
Identity = 207/218 (94.95%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPES VNKYTAEQLMLMKTQDAGYILQKMQSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESRVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSR 180
           HSLDNQPSNKHLY+ EDREEANEILS SSKGLVASSE VPDSI+RKT+ASYKELEARRSR
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTVASYKELEARRSR 180

Query: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKP 219
           VSELEKLYMDMTLQQELRKKGRKRKLREDE+ANPTSKP
Sbjct: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDEVANPTSKP 218

[Close]

BLAST of Lsi11G008590 vs. NCBI nr
Match: KAE8651705.1 (hypothetical protein Csa_006293 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 1.3e-105
Identity = 205/218 (94.04%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 34  MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 93

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEK+KIEKLTATL
Sbjct: 94  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 153

Query: 121 HSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSR 180
           HSLDNQPSNKHLY+ EDREEANEILS SSKGLVASSE VPDSI+RKTI+SYKELEARRSR
Sbjct: 154 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 213

Query: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKP 219
           V+ELEKLYMDMTLQQELRKKGRKRKLREDEL+NPT KP
Sbjct: 214 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKP 251

[Close]

BLAST of Lsi11G008590 vs. NCBI nr
Match: XP_038889584.1 (probable U3 small nucleolar RNA-associated protein 11 [Benincasa hispida])

HSP 1 Score: 393.7 bits (1010), Expect = 1.3e-105
Identity = 208/218 (95.41%), Postives = 211/218 (96.79%), Query Frame = 0


Query: 1   MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120
           DEFYFKMIRTRTVDGVHK ESHVNKYTAE+LMLMKTQDAGYILQKMQSEKRKIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKQESHVNKYTAEKLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSR 180
           HSLDNQPSNKH Y+ EDREEANEILS SSK LVASSE VPDSIKRKTIASYKELEARRSR
Sbjct: 121 HSLDNQPSNKHFYFAEDREEANEILSRSSKRLVASSEAVPDSIKRKTIASYKELEARRSR 180

Query: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKP 219
           VSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKP
Sbjct: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKP 218

[Close]

BLAST of Lsi11G008590 vs. NCBI nr
Match: XP_004152832.1 (probable U3 small nucleolar RNA-associated protein 11 [Cucumis sativus] >XP_031737446.1 probable U3 small nucleolar RNA-associated protein 11 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 1.3e-105
Identity = 205/218 (94.04%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSL+NAVPRRPYKERAQP SRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYYVEDREEANEILSCSSKGLVASSETVPDSIKRKTIASYKELEARRSR 180
           HSLDNQPSNKHLY+ EDREEANEILS SSKGLVASSE VPDSI+RKTI+SYKELEARRSR
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180

Query: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKP 219
           V+ELEKLYMDMTLQQELRKKGRKRKLREDEL+NPT KP
Sbjct: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKP 218

[Close]

BLAST of Lsi11G008590 vs. NCBI nr
Match: KAG6586143.1 (putative U3 small nucleolar RNA-associated protein 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 379.8 bits (974), Expect = 2.0e-101
Identity = 200/219 (91.32%), Postives = 210/219 (95.89%), Query Frame = 0


Query: 1   MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLKNAVP+RPYKERAQP+SRKKFGLLEKHKDY+ERAKA+HKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120
           DEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAGYILQK+QSEKRKIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYYVEDREEANEILSCSSKG-LVASSETVPDSIKRKTIASYKELEARRS 180
           HSLDNQPSNKH+Y+ EDREEANEI S SSKG  VASSE VPDSIKRKTI+SYKELEARRS
Sbjct: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180

Query: 181 RVSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKP 219
           RVSELEKLYMDMTLQQEL KKGRKRKLREDEL NPTSKP
Sbjct: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKP 219

[Close]

BLAST of Lsi11G008590 vs. TAIR 10
Match: AT3G60360.1 (embryo sac development arrest 14 )

HSP 1 Score: 258.8 bits (660), Expect = 4.8e-69
Identity = 133/218 (61.01%), Postives = 175/218 (80.28%), Query Frame = 0


Query: 1   MSSLKNAVPRRPYKERAQPHSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSL+NA+PR  +KER+QP +RK+FG+LEKHKDYI RA A+HKK++TL+ L++KAAFKNP
Sbjct: 1   MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120
           DEF FKMI ++TVDG H+P+  VNKY+AE+LM+MKTQD GY+ QK QSEK KI+KLTA+L
Sbjct: 61  DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKNKIDKLTASL 120

Query: 121 HSLDNQPSNKHLYYVEDREEANEI-LSCSSKGLVASSETVPDSIKRKTIASYKELEARRS 180
               +Q S +H+YY EDREEA E+ +   SK  +++ E +P  IK+K   SY++LE R+S
Sbjct: 121 QCTGDQSSRRHVYYAEDREEARELEVQGRSKSDISTVE-IPKDIKKKMDRSYRDLEGRKS 180

Query: 181 RVSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSK 218
           R  +LEKLY DM++Q+EL+KKGRKRKLR+DEL NP  K
Sbjct: 181 RAKDLEKLYTDMSMQKELQKKGRKRKLRDDELLNPNGK 217

The following BLAST results are available for this feature:

BLAST of Lsi11G008590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S1Z1	4.3e-75	65.75	Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. jap...	[more]
Q9M223	6.7e-68	61.01	Probable U3 small nucleolar RNA-associated protein 11 OS=Arabidopsis thaliana OX...	[more]
Q55C50	8.8e-28	37.44	Probable U3 small nucleolar RNA-associated protein 11 OS=Dictyostelium discoideu...	[more]
Q8R5K5	1.6e-24	42.41	Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus OX=10...	[more]
Q9CZJ1	2.0e-24	38.42	Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus OX=10090 G...	[more]

BLAST of Lsi11G008590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B400	1.3e-106	94.95	U3 small nucleolar RNA-associated protein 11 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A5A7TX11	1.3e-106	94.95	U3 small nucleolar RNA-associated protein 11 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0LKH7	6.4e-106	94.04	U3 small nucleolar RNA-associated protein 11 OS=Cucumis sativus OX=3659 GN=Csa_2...	[more]
A0A6J1HNU6	6.2e-101	91.28	U3 small nucleolar RNA-associated protein 11 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1FGQ3	6.2e-101	90.87	U3 small nucleolar RNA-associated protein 11 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Lsi11G008590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441892.1	2.7e-106	94.95	PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] ...	[more]
KAE8651705.1	1.3e-105	94.04	hypothetical protein Csa_006293 [Cucumis sativus]	[more]
XP_038889584.1	1.3e-105	95.41	probable U3 small nucleolar RNA-associated protein 11 [Benincasa hispida]	[more]
XP_004152832.1	1.3e-105	94.04	probable U3 small nucleolar RNA-associated protein 11 [Cucumis sativus] >XP_0317...	[more]
KAG6586143.1	2.0e-101	91.32	putative U3 small nucleolar RNA-associated protein 11, partial [Cucurbita argyro...	[more]

BLAST of Lsi11G008590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60360.1	4.8e-69	61.01	embryo sac development arrest 14	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..23
None	No IPR available	PANTHER	PTHR12838:SF1	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11	coord: 1..219
IPR007144	Small-subunit processome, Utp11	PFAM	PF03998	Utp11	coord: 10..213 e-value: 1.6E-54 score: 185.4
IPR007144	Small-subunit processome, Utp11	PIRSF	PIRSF015952	U3snoRNP11	coord: 146..221 e-value: 3.8E-7 score: 27.9 coord: 1..149 e-value: 2.1E-54 score: 182.8
IPR007144	Small-subunit processome, Utp11	PANTHER	PTHR12838	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11	coord: 1..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G008590.1	Lsi11G008590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome