Lsi11G008100 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G008100
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	methyl-CpG-binding domain-containing protein 2-like
Location	chr11: 9894157 .. 9901443 (+)
RNA-Seq Expression	Lsi11G008100
Synteny	Lsi11G008100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAAATGGCAGTAACGTAAATTGGAAACAGATTAGATTCATAAGTCTAATCCAAACCATAAACAATTAAACGACAATTAATTCAACAATTTTAAGAATATCTGTGTTGTTTTTGGATGAAAACCCATTTCCAAATTCCACCAACGAATTATCCTCCTTCTCCTTCTTCTCTTCTCAACGTCTATCTGCAAATCCTTCTCCTTTCCCTTTTCCCGAGGCCTTACCATCATTTCAACACCAGAATTCCCACACCCATTTCCATTTCCTTCCCCCCAGTTCTTCCGCATTTTCCATCTTCCACCTGCCCATTTCCTCGAAATCAACGTATTTCATCTCTCTTTTCTTCCTCGCCTCTGATTCCAATATTTGTGTAATATCTCTTTCTTTCTCCTCTGTTTTTTTTTTTTCCTTTTATTGTTTTAATTTCCTTCGTTGGATTGTGTTTCTCTTTATGCATCGGCTGGTTGTTTTTGTTGGGTATTTGAGTCAATTTGTTGAGGGGTATGGTGTTTAGAATTGAAGATTTTGTGGGATTGAAGGTTTAGATAGATTGGATGATATTTTGGGTTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCCGATGATGGGAGAGGTTGTGGATCTATGGTGGAGGTGCGTTTGTGTTATGGGTTCCGATCGAGATAAGAATTGAATGATCTCATGAGACTGGTGTATTTTTTTTTGCTCTTTGATTATGTAGCTGGAGAGAAATTATGGGTATGTTTCTTCTACTCCCATGGCGGTCGATCTTGCTGTTTTGCTTCCTTTTTTGTTGTGGGTTTCCTGTTTTTTAGATGATCTTGCTGGCCTGCTGTATTGGGTTCAAATCTTTCTTCTTGTTGTTCATGATGATCTCTTCACTGCATTGTTGTTTTAGAGCTTGGAGTTACGTGTTTTTACCCTTCTCGCCTCTTTGACATTTTGATCATTGCTTAAGTTTCTTGTGTTTACCAGTTTTTTTTCAGTGTTTTGGAGAGAGAATTCATATAGGAAGTATTTGTTTATATCAAGAAGATGCAGAGGCTTTGGTTGCTTGTAATGTTGTGCATTATCCTTATGTCTTTCTAGGATATGTTTTATTGAGAAGATTGAAAGAATGCATTTAACAGGAGAACTTAACTTAGAAGAGCCAAAACAAAAACCTTCATTATAGATTCAATAAAGGTTGCCAAAGTGAGCATAACACACACCTTGCATTCGGATGTGTTACTGATCAAGAGGTCTTTGGTTAGAATCCTCTACACCTATTGTACTTAAAAAAAAAATCATAGATTCAATAAAGGTTCCAATCAATAAGAATAAGGATGAAAGGATAACTCCAAAACTCTTTAGAAATAAACACCCACAATGAGGGGTTGAGCTTAGTATAAGTTCTCTTAAGAAAATGGAAATACATCTTCTGAATATTTTGAATTTAATGCTGAATCAATGCTGCTCATTTCCCTCTTTCTTTATTTTAACCATTTGCTAGTAACAACTCTCAACAAACTTTTACCAACTCATGTGCTAACCAACTAACTCAATGGCCAACCATTAACTCCCTTCTCTAATTGATTAGTCCTAAGATTGTGAATTTTGTTTGGATTTCATCATTTTTTCATATCTTATAGATGGTGTTCTCTTCATAAATCTTCTTCGAATTATACTAAGTGTTTTTTTAACCCTTTCACTTGGGAAGAATATCCTATCCTGCCCTGTTTGTAGTATCTTTTCTTCTCAAGGATTTCATCTTTGCTTTGAGTTTTGACTTGTAAAAATGTAATTGTGTTGCTCTTAAATATCAGAATTTGGGATTATGTTTCAATTGGAACACTATTTCCTCTCTTAGTAATCATTCTTGTTTGATCGATGCCAATAAATGTTTCATTTGGTTATCGCTTTTGGCTCTGGCAGTGGGAGAAGTAGTATCATCCTCTTACCTTTACTAATAAATTTTACTTTTCCTTTCTAATAAAAGGAAATGTAAACTGAGATTATATGGCTTCTCTCGTCTGGGTTTGTGACGAGTTCTTTCTGTAATGATTCGTTAAACCTTATTTTGTTAGATTGGAGACCCTTATTCTAGGGTGCTCCCTTTAGTGGGCTAGGTTCTTTTTGCATGTCCTTGTATTCTTTTATTTTTTCTCAATAAAAGTCGGTCTTTTATTAAAGAAAAAAAAAAAAAAAAAAAGTAAACTGAGATTATATTCTGAATCTGTTTTCTTTGTATATAGCAGGGTTTTGGATCATGGTATGATGTGGTTAAAGCGCTGATAAAATTACCAGTATGGATGGTGGTGAAGAAAATGACTTGAATGAGCCGAGTTTGTCAAACGACCAAGAAACTCCACAGCAAGATGTTATAGCTGTTTCTTCCTCTTCATCCTCTTTTTCATCTTCTTCGTCCGAGAACGAGTTACATGAGACTAGGAACGAGAATGCCCAATCTCAATCTAATGGAAATCCCTCTCGTGAACTGGTTATATACAACCCTTCTGCTAATGATGGAGATGCTAATGAACCTGTTTCCACACCTGTTAAGCAGCAGCGTGCATCACTTGTAGGACACTCGACTCCCAATTCTTCCAGAATTTTACCATCAGTAGGGGCCTTTACTGTCCAGTGTGCAAGCTGTTTTAAATGGAGGCTCATTCCAACGAAGGAAAAGTACGAGGAAATACGTGAACATCTGTTAGAGCAACCTTTTTACTGTGAAACTGCTCGTGAATGGCGGCCTGATATCTCTTGTGATGATCCTGCTGACATTACTCAAGATGGCAGTAGGCTATGGGCAATTGACAAGCCGAATATAGCACAGCCCCCTCCTGGCTGGCAAAGGCTACTACACATCAGAGGTGAAGGAAGCACCAAGTTTGCTGATGTGTATGTACTTTAAATTCTGTATTATCAGTGCAAATTTTGTGGGTTTTATTGTCTATACCTGTCATCAGTTAGATTTGGACTACTACCATGTCTCTCTCTGTCTCTCTCTCTCTAAAATTCTTATTCTTAGATCTTTTGGGTTTATTGTTATGAATTATACTAAAGGAAAAAATCCTATAATTAAATATCTTTGTGTTTTCCTTAAAATTTAAATGTTTTCTATATTATAATTTTTCCTTTTCTGCCTTCTATTAGCTACAAATCAGAATCACCATTCTTACCATTCCGAAGTCATTTAAATTGCTGCTGTTATCAAAAAAGTCATGGTTACTATTCTTTTGTAAAGATATTAAATCGTTTTCCTTCTAATCATCATATCATCACTTAGTACTCATTGTTATTTTTACTCTGTGATTGTGTCCATGGGTGCAAGTGCTAACTCTGAGATTCTGTCCGAACCAGGGAAATACCAACCGTTTGATTCTCTACTAAAAGCTTTTTTGCACCATCAAAATATTTTTGATAGGATGAAAGATTTTAATCAAAGGGGGTTAACCAGGTCCAAATTAGTGGAAATTACTAAATGTCCTAATGAAGCTGAAAGGTCATTTAAATTGTACTTTGTCATTTCTAGAATCATTAGGATCTTATTAAATTTTATGTTCTGCTGTTATCAGGTATTACATTGCACCATCAGGCAAGAAGCTTCGTTCGATGGTGGATATTCAGAAGTATGTTGCTGTATATTGTGCTTCAAACTTTATTTAATGTTTATTCTTTTTTATGTTTGATTGAATGCTTGTAAATAATCTGTGGCCTACAAATATAGTGTGTTATTTATTGATTCTTTTGGGCACCCTCTGATTGTTCATTTGGTTCTGAAGATACCTGATTGAACATCCAGAGTACCAAACGGAAGATGTATCCATGACACGGTTTTCATTTCAAATCCCGAAGCCTCTGCGGGAAAATTATGTGAGAAAGCGGCGCCCCAATATGAATGCTTCATGTGACGGTTCTAAGCTTGAATCTGGTGAAGGTACTCGTTTCCTATTCGTCCCTTGAAATTTTTTGATGACTGAGATCTTGGGAGCTGGTGTGTTAGATTTAACTGTCTTATGTTTTTCTTTAATTATCTTTTAGGCTTTATCCTTTAAATTGTACCCCTTTTATGTATAGTCCTGGTCGGGGGGATTCCTTTTGTTGTTTTTTTTCTTTTTTTTTGTTTGTCCTTACAGTATTCTTGTAGGTTTACTGACTAAAAAAAAGATTTTAGTCTAGCTTTTCAAAAATGTTCCTAATTTAAAGATGAACTATGATGCTAGAAATCAACTGTAAAAAAAATATCAAATTCTAAGCTTTTTTATCCTCTTCAAGATATAGGTTTAAATTGGAGTTTTATTTTTTCTTCTCGTTAGCTTGTTCTTGTTCTTTTTTCTTCCCTCTTTTCCTGGAGTTCGTATCTTTGAGCAATGCTCTCTTTTCATCTTTAATGAAAAGTTTGGTTTCTTGTTGAATAAAAAACAGAAAGATTGGTTTTTTGTTCTATAAAAGTTTGTCCGGATATCTTTCGTTTTCCTCTACATTGACCATGTTTACTTTTGACAGCTTTAATGCATGGTATGTTAATCAGTACAATGCTACAATAGTATATTCTCCCTGTTTTGTGCAGTGCATCCAATATCATGGGCTCGTCCAGACGATTCTACTGCACTGCAGCTTGGAAAGCCGGGGCTCTCGGAACTGCTTTCGACAGCACCGGTTGACAATCCCGTCACTCGACCAGCAAAGAAGGTGAAAAGAGCTCTAGCAAAGGAAATGCGTAGAAGTTCTCTTGCATCGACCGAACCTCCTGCTGTAAAGTTAGAACGTTGCTTTGATCAATATGAAAAGTAATACTGGTTTGAGCCTGGGATTGTATTTTGTTGTGCCTTGTTTTGTTGCATTACATGGTTTCATCAAAGTGGAAAAGGAGTTGTAACTCAAAAAGATGACAAAAGGAGGAATTTTGGAAAGGGAATTGTGACAGAGCATGTATATTATCATTAACCTTATACGATATTTTTTGGTCGTTGTTTGTTTGTTTTAGTTAAACAACGCTAGAGGTGAGGGATTCGAACCTCTCGACATCTTGGTCGTGGGTATATGACCTTAAATCAGTTGAGTTATGCTCGGGTTGACTACATTCTATCTTGAATAGAGATAACATGAAGGGAACGAGAAGGAAGAACATGCATACTCAAGAATGTTAGTAACTAACAATTCTACCTCAAAAATCTTGTATGATATGAATTTCAAAATTCAAACCTCAGTTTATTTTCAAATCCCCTAAGATTGTGCATTTACTTTTTTATACATTGTGCTTCATTGGTTTTC

mRNA sequence

AGAGAAATGGCAGTAACGTAAATTGGAAACAGATTAGATTCATAAGTCTAATCCAAACCATAAACAATTAAACGACAATTAATTCAACAATTTTAAGAATATCTGTGTTGTTTTTGGATGAAAACCCATTTCCAAATTCCACCAACGAATTATCCTCCTTCTCCTTCTTCTCTTCTCAACGTCTATCTGCAAATCCTTCTCCTTTCCCTTTTCCCGAGGCCTTACCATCATTTCAACACCAGAATTCCCACACCCATTTCCATTTCCTTCCCCCCAGTTCTTCCGCATTTTCCATCTTCCACCTGCCCATTTCCTCGAAATCAACGTATTTCATCTCTCTTTTCTTCCTCGCCTCTGATTCCAATATTTGTGGTTTTGGATCATGGTATGATGTGGTTAAAGCGCTGATAAAATTACCAGTATGGATGGTGGTGAAGAAAATGACTTGAATGAGCCGAGTTTGTCAAACGACCAAGAAACTCCACAGCAAGATGTTATAGCTGTTTCTTCCTCTTCATCCTCTTTTTCATCTTCTTCGTCCGAGAACGAGTTACATGAGACTAGGAACGAGAATGCCCAATCTCAATCTAATGGAAATCCCTCTCGTGAACTGGTTATATACAACCCTTCTGCTAATGATGGAGATGCTAATGAACCTGTTTCCACACCTGTTAAGCAGCAGCGTGCATCACTTGTAGGACACTCGACTCCCAATTCTTCCAGAATTTTACCATCAGTAGGGGCCTTTACTGTCCAGTGTGCAAGCTGTTTTAAATGGAGGCTCATTCCAACGAAGGAAAAGTACGAGGAAATACGTGAACATCTGTTAGAGCAACCTTTTTACTGTGAAACTGCTCGTGAATGGCGGCCTGATATCTCTTGTGATGATCCTGCTGACATTACTCAAGATGGCAGTAGGCTATGGGCAATTGACAAGCCGAATATAGCACAGCCCCCTCCTGGCTGGCAAAGGCTACTACACATCAGAGGTGAAGGAAGCACCAAGTTTGCTGATGTGTATTACATTGCACCATCAGGCAAGAAGCTTCGTTCGATGGTGGATATTCAGAAATACCTGATTGAACATCCAGAGTACCAAACGGAAGATGTATCCATGACACGGTTTTCATTTCAAATCCCGAAGCCTCTGCGGGAAAATTATGTGAGAAAGCGGCGCCCCAATATGAATGCTTCATGTGACGGTTCTAAGCTTGAATCTGGTGAAGTGCATCCAATATCATGGGCTCGTCCAGACGATTCTACTGCACTGCAGCTTGGAAAGCCGGGGCTCTCGGAACTGCTTTCGACAGCACCGGTTGACAATCCCGTCACTCGACCAGCAAAGAAGGTGAAAAGAGCTCTAGCAAAGGAAATGCGTAGAAGTTCTCTTGCATCGACCGAACCTCCTGCTGTAAAGTTAGAACGTTGCTTTGATCAATATGAAAAGTAATACTGGTTTGAGCCTGGGATTGTATTTTGTTGTGCCTTGTTTTGTTGCATTACATGGTTTCATCAAAGTGGAAAAGGAGTTGTAACTCAAAAAGATGACAAAAGGAGGAATTTTGGAAAGGGAATTGTGACAGAGCATGTATATTATCATTAACCTTATACGATATTTTTTGGTCGTTGTTTGTTTGTTTTAGTTAAACAACGCTAGAGGTGAGGGATTCGAACCTCTCGACATCTTGGTCGTGGGTATATGACCTTAAATCAGTTGAGTTATGCTCGGGTTGACTACATTCTATCTTGAATAGAGATAACATGAAGGGAACGAGAAGGAAGAACATGCATACTCAAGAATGTTAGTAACTAACAATTCTACCTCAAAAATCTTGTATGATATGAATTTCAAAATTCAAACCTCAGTTTATTTTCAAATCCCCTAAGATTGTGCATTTACTTTTTTATACATTGTGCTTCATTGGTTTTC

Coding sequence (CDS)

ATGGATGGTGGTGAAGAAAATGACTTGAATGAGCCGAGTTTGTCAAACGACCAAGAAACTCCACAGCAAGATGTTATAGCTGTTTCTTCCTCTTCATCCTCTTTTTCATCTTCTTCGTCCGAGAACGAGTTACATGAGACTAGGAACGAGAATGCCCAATCTCAATCTAATGGAAATCCCTCTCGTGAACTGGTTATATACAACCCTTCTGCTAATGATGGAGATGCTAATGAACCTGTTTCCACACCTGTTAAGCAGCAGCGTGCATCACTTGTAGGACACTCGACTCCCAATTCTTCCAGAATTTTACCATCAGTAGGGGCCTTTACTGTCCAGTGTGCAAGCTGTTTTAAATGGAGGCTCATTCCAACGAAGGAAAAGTACGAGGAAATACGTGAACATCTGTTAGAGCAACCTTTTTACTGTGAAACTGCTCGTGAATGGCGGCCTGATATCTCTTGTGATGATCCTGCTGACATTACTCAAGATGGCAGTAGGCTATGGGCAATTGACAAGCCGAATATAGCACAGCCCCCTCCTGGCTGGCAAAGGCTACTACACATCAGAGGTGAAGGAAGCACCAAGTTTGCTGATGTGTATTACATTGCACCATCAGGCAAGAAGCTTCGTTCGATGGTGGATATTCAGAAATACCTGATTGAACATCCAGAGTACCAAACGGAAGATGTATCCATGACACGGTTTTCATTTCAAATCCCGAAGCCTCTGCGGGAAAATTATGTGAGAAAGCGGCGCCCCAATATGAATGCTTCATGTGACGGTTCTAAGCTTGAATCTGGTGAAGTGCATCCAATATCATGGGCTCGTCCAGACGATTCTACTGCACTGCAGCTTGGAAAGCCGGGGCTCTCGGAACTGCTTTCGACAGCACCGGTTGACAATCCCGTCACTCGACCAGCAAAGAAGGTGAAAAGAGCTCTAGCAAAGGAAATGCGTAGAAGTTCTCTTGCATCGACCGAACCTCCTGCTGTAAAGTTAGAACGTTGCTTTGATCAATATGAAAAGTAA

Protein sequence

MDGGEENDLNEPSLSNDQETPQQDVIAVSSSSSSFSSSSSENELHETRNENAQSQSNGNPSRELVIYNPSANDGDANEPVSTPVKQQRASLVGHSTPNSSRILPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQTEDVSMTRFSFQIPKPLRENYVRKRRPNMNASCDGSKLESGEVHPISWARPDDSTALQLGKPGLSELLSTAPVDNPVTRPAKKVKRALAKEMRRSSLASTEPPAVKLERCFDQYEK

Homology

[Close]

BLAST of Lsi11G008100 vs. ExPASy Swiss-Prot
Match: Q8LA53 (Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=MBD2 PE=1 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.7e-73
Identity = 156/284 (54.93%), Postives = 193/284 (67.96%), Query Frame = 0


Query: 30  SSSSSFSSSSSENELHETRNENAQSQSNGNPSRELVIYNPSANDGDANEPVSTPVKQQRA 89
           S S +   SSS N   E R EN           +LV+Y+   ND D  E V  PV+ Q  
Sbjct: 4   SQSRAVQRSSSPN---EDRGEN-----------QLVVYDLKGND-DTEEEV-LPVQSQ-- 63

Query: 90  SLVGHSTPNSSRI-LPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFYCETAREW 149
                  P SSR   PS+GAFTVQCASCFKWRL+P+ +KYEEIRE LLE PF+C+TAREW
Sbjct: 64  -------PLSSRTQCPSIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREW 123

Query: 150 RPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKK 209
           +PDISCD PADI QDG+RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYY+APSGKK
Sbjct: 124 KPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKK 183

Query: 210 LRSMVDIQKYLIEHPEYQTEDVSMTRFSFQIPKPLRENYVRKRRPNMNASCDGSKLE-SG 269
           LRS V++QKYL ++ EY  E V +++FSFQIPKPL+++YVRKR   +  S D +    + 
Sbjct: 184 LRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQDDYVRKRPARLLDSIDNTNTPVAK 243

Query: 270 EVHPISWARPDDSTALQLGKPGLSELLSTAPVDNPVTRPAKKVK 312
           E +P++W  PDD  +LQLG P  S L      +N   +P+KK K
Sbjct: 244 EANPLAWISPDDHISLQLGTPTESGL------NNSHYQPSKKKK 256

[Close]

BLAST of Lsi11G008100 vs. ExPASy Swiss-Prot
Match: Q9FZP6 (Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN=MBD12 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.1e-34
Identity = 73/141 (51.77%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 111 VQCASCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAI 170
           VQC  C KWRLIP+ + Y  I+E  L+ PF C T   W P++SC+ P D T   +  W  
Sbjct: 2   VQCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQDGTTCDT--W-- 61

Query: 171 DKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQTEDV 230
             P+I   P GW R +HIR E STKFADVYY  PSG++LRS  ++Q +L  HPEY  E V
Sbjct: 62  --PSIPPIPTGWSRSVHIRSE-STKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGV 121

Query: 231 SMTRFSFQIPKPLRENYVRKR 252
           + ++FSFQIPKPL +NYV+KR
Sbjct: 122 NRSQFSFQIPKPLDDNYVKKR 135

[Close]

BLAST of Lsi11G008100 vs. ExPASy Swiss-Prot
Match: Q9LYB9 (Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=MBD4 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 8.8e-25
Identity = 54/140 (38.57%), Postives = 87/140 (62.14%), Query Frame = 0


Query: 106 VGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGS 165
           +  +  QC +C KWR+I ++E+YE+IR  +LE PF C+     +  +SC++PADI  D S
Sbjct: 25  IDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQK----KQGMSCEEPADIDYDSS 84

Query: 166 RLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEY 225
           R W IDKP + + P G++R L +R + S    D YY  P+GKKLRS  +I  ++  +PE+
Sbjct: 85  RTWVIDKPGLPKTPKGFKRSLVLRKDYSK--MDTYYFTPTGKKLRSRNEIAAFVEANPEF 144

Query: 226 QTEDVSMTRFSFQIPKPLRE 246
           +  +  +  F+F +PK + +
Sbjct: 145 R--NAPLGDFNFTVPKVMED 156

[Close]

BLAST of Lsi11G008100 vs. ExPASy Swiss-Prot
Match: Q5XEN5 (Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=MBD1 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.7e-24
Identity = 68/202 (33.66%), Postives = 108/202 (53.47%), Query Frame = 0


Query: 44  LHETRNENAQSQSNGNPSRELVIYNPSANDGDANEPVSTPVKQQRASLVGHSTPNSSRIL 103
           L ++R+EN+   S+G+   E            + EP +  V Q++A   G          
Sbjct: 9   LKKSRSENSSVASSGSKIEE--------QTEKSAEPTTIKV-QKKAGTPGR--------- 68

Query: 104 PSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQD 163
            S+  F VQC  C KWR I T+++YE+IR  + E PF+C+T    +  +SC+D  D+  D
Sbjct: 69  -SIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKT----KEGVSCEDVGDLNYD 128

Query: 164 GSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHP 223
            SR W IDKP + + P G++R L +R + S    D YYI P+GKKL+S  +I  ++  + 
Sbjct: 129 SSRTWVIDKPGLPRTPRGFKRSLILRKDYSK--MDAYYITPTGKKLKSRNEIAAFIDANQ 183

Query: 224 EYQTEDVSMTRFSFQIPKPLRE 246
           +Y+     +  F+F +PK + E
Sbjct: 189 DYKY--ALLGDFNFTVPKVMEE 183

[Close]

BLAST of Lsi11G008100 vs. ExPASy TrEMBL
Match: A0A0A0LHE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062680 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 5.7e-176
Identity = 312/342 (91.23%), Postives = 327/342 (95.61%), Query Frame = 0


Query: 1   MDGGEENDLNEPSLSNDQETPQQDVIAVSSSSSSFSSSSSENELHETRNENAQSQSNGNP 60
           M GGEENDLNEPSLSNDQETP+QDVIAVSSSSSS SSSSSENELHETRNEN QSQSN NP
Sbjct: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENVQSQSNDNP 60

Query: 61  SRELVIYNPSANDGDANEPVSTPVKQQRASLVGHSTPNSSRILPSVGAFTVQCASCFKWR 120
           SRELVIY+PSA+DG AN+PVSTPVKQQ + ++GH TPNSSR+LPSVGAFTVQCA CFKWR
Sbjct: 61  SRELVIYDPSADDGHANDPVSTPVKQQPSPVLGHLTPNSSRVLPSVGAFTVQCAGCFKWR 120

Query: 121 LIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPP 180
           LIPTKEKYEEIREHLLE+PFYCETAR WRPDISCDDPADITQDGSRLWAIDKPNIAQPPP
Sbjct: 121 LIPTKEKYEEIREHLLEKPFYCETARGWRPDISCDDPADITQDGSRLWAIDKPNIAQPPP 180

Query: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQTEDVSMTRFSFQIP 240
           GWQRLLHIRGEGSTKFADVYY APSGKKLRSMVDIQKYLIEHPEYQTE VSMTRFSFQIP
Sbjct: 181 GWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQIP 240

Query: 241 KPLRENYVRKRRPNMNASCDGSKLESGEVHPISWARPDDSTALQLGKPGLSELLSTAPVD 300
           KPLRE+YVRKRRPNMNASCD SKLESGEV PISWARPDDSTALQLGKPGL+ELLST+PV+
Sbjct: 241 KPLREDYVRKRRPNMNASCDASKLESGEVRPISWARPDDSTALQLGKPGLTELLSTSPVN 300

Query: 301 NPVTRPAKKVKRALAKEMRRSSLASTEPPAVKLERCFDQYEK 343
           NPVTRPAKKVKRALA+EMRRSSL STEPPA+KLERCFDQYEK
Sbjct: 301 NPVTRPAKKVKRALAQEMRRSSLTSTEPPAIKLERCFDQYEK 342

[Close]

BLAST of Lsi11G008100 vs. ExPASy TrEMBL
Match: A0A5D3CST2 (Methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00130 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.8e-172
Identity = 308/342 (90.06%), Postives = 322/342 (94.15%), Query Frame = 0


Query: 1   MDGGEENDLNEPSLSNDQETPQQDVIAVSSSSSSFSSSSSENELHETRNENAQSQSNGNP 60
           M GGEENDLNEPSLSNDQETP+QDVIAVSSSSSS  SSSSENELHETRNEN QSQ N N 
Sbjct: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSL-SSSSENELHETRNENVQSQPNENS 60

Query: 61  SRELVIYNPSANDGDANEPVSTPVKQQRASLVGHSTPNSSRILPSVGAFTVQCASCFKWR 120
           SRELVIYNPSA DG AN+PV+TPVKQQ + L+GH TPNS+R+LPSVGAFTVQCA CFKWR
Sbjct: 61  SRELVIYNPSAKDGRANDPVATPVKQQPSPLLGHLTPNSTRVLPSVGAFTVQCAGCFKWR 120

Query: 121 LIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPP 180
           LIPTKEKYEEIREHLLEQPFYCETAREWRPDI+CDDPADITQDGSRLWAIDKPNIAQPPP
Sbjct: 121 LIPTKEKYEEIREHLLEQPFYCETAREWRPDITCDDPADITQDGSRLWAIDKPNIAQPPP 180

Query: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQTEDVSMTRFSFQIP 240
           GWQRLLHIRGEGSTKFADVYY APSGKKLRSMVDIQKYLIEHPEYQTE VSMTRFSFQIP
Sbjct: 181 GWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQIP 240

Query: 241 KPLRENYVRKRRPNMNASCDGSKLESGEVHPISWARPDDSTALQLGKPGLSELLSTAPVD 300
           KPLRE+YVRKRRPN+NASCD SKLESGEV PISWARPDDSTALQLGKPGL ELLST+PVD
Sbjct: 241 KPLREDYVRKRRPNINASCDASKLESGEVRPISWARPDDSTALQLGKPGLPELLSTSPVD 300

Query: 301 NPVTRPAKKVKRALAKEMRRSSLASTEPPAVKLERCFDQYEK 343
           +PVTRPAKKVKRAL +EMRRSSLASTEPPA+KLE CFDQYEK
Sbjct: 301 HPVTRPAKKVKRALGQEMRRSSLASTEPPAIKLEGCFDQYEK 341

[Close]

BLAST of Lsi11G008100 vs. ExPASy TrEMBL
Match: A0A1S3BR32 (methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo OX=3656 GN=LOC103492271 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.8e-172
Identity = 308/342 (90.06%), Postives = 322/342 (94.15%), Query Frame = 0


Query: 1   MDGGEENDLNEPSLSNDQETPQQDVIAVSSSSSSFSSSSSENELHETRNENAQSQSNGNP 60
           M GGEENDLNEPSLSNDQETP+QDVIAVSSSSSS  SSSSENELHETRNEN QSQ N N 
Sbjct: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSL-SSSSENELHETRNENVQSQPNENS 60

Query: 61  SRELVIYNPSANDGDANEPVSTPVKQQRASLVGHSTPNSSRILPSVGAFTVQCASCFKWR 120
           SRELVIYNPSA DG AN+PV+TPVKQQ + L+GH TPNS+R+LPSVGAFTVQCA CFKWR
Sbjct: 61  SRELVIYNPSAKDGRANDPVATPVKQQPSPLLGHLTPNSTRVLPSVGAFTVQCAGCFKWR 120

Query: 121 LIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPP 180
           LIPTKEKYEEIREHLLEQPFYCETAREWRPDI+CDDPADITQDGSRLWAIDKPNIAQPPP
Sbjct: 121 LIPTKEKYEEIREHLLEQPFYCETAREWRPDITCDDPADITQDGSRLWAIDKPNIAQPPP 180

Query: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQTEDVSMTRFSFQIP 240
           GWQRLLHIRGEGSTKFADVYY APSGKKLRSMVDIQKYLIEHPEYQTE VSMTRFSFQIP
Sbjct: 181 GWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQIP 240

Query: 241 KPLRENYVRKRRPNMNASCDGSKLESGEVHPISWARPDDSTALQLGKPGLSELLSTAPVD 300
           KPLRE+YVRKRRPN+NASCD SKLESGEV PISWARPDDSTALQLGKPGL ELLST+PVD
Sbjct: 241 KPLREDYVRKRRPNINASCDASKLESGEVRPISWARPDDSTALQLGKPGLPELLSTSPVD 300

Query: 301 NPVTRPAKKVKRALAKEMRRSSLASTEPPAVKLERCFDQYEK 343
           +PVTRPAKKVKRAL +EMRRSSLASTEPPA+KLE CFDQYEK
Sbjct: 301 HPVTRPAKKVKRALGQEMRRSSLASTEPPAIKLEGCFDQYEK 341

[Close]

BLAST of Lsi11G008100 vs. ExPASy TrEMBL
Match: A0A6J1EN70 (methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111436133 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 2.6e-160
Identity = 295/343 (86.01%), Postives = 315/343 (91.84%), Query Frame = 0


Query: 1   MDGGEENDLNEPSLSNDQETPQQDVIAVSSSSSSFSSSSSENELHETRNENAQSQSNGNP 60
           M GGEENDLNEPSLSN QET QQDVIAVSSSSSSFSSSSSE+ELHETRNEN QSQSN N 
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVIYNPSAND-GDANEPVSTPVKQQRASLVGHSTPNSSRILPSVGAFTVQCASCFKW 120
           SRELV+YNPSAND G A+EPVSTPV+ QR  L+GH TPNSSR+L  VGAFTVQCASCFKW
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVL-RVGAFTVQCASCFKW 120

Query: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPP 180
           RLIPTKEKYEEIREHLLE+PFYCETAREWRPDISC+DPADITQD  RLWAIDKPNIAQPP
Sbjct: 121 RLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPP 180

Query: 181 PGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQTEDVSMTRFSFQI 240
           PGWQRLLHIRGEGSTKFADVYYIAPSGK+LRSMVDIQKYLIEHPEYQTE V MTRFSFQ 
Sbjct: 181 PGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQT 240

Query: 241 PKPLRENYVRKRRPNMNASCDGSKLESGEVHPISWARPDDSTALQLGKPGLSELLSTAPV 300
           PKPL+ENYVRKRR NMNASCDGSKLESGEV+PISWARPD+STALQLG+PGLSEL  TAPV
Sbjct: 241 PKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPV 300

Query: 301 DNPVTRPAKKVKRALAKEMRRSSLASTEPPAVKLERCFDQYEK 343
           DN V++PAKK KRA+AKEM RSSLASTEPP + LER F++Y+K
Sbjct: 301 DNRVSQPAKKAKRAVAKEM-RSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of Lsi11G008100 vs. ExPASy TrEMBL
Match: A0A6J1K3E0 (methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111492010 PE=4 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 8.2e-159
Identity = 292/343 (85.13%), Postives = 312/343 (90.96%), Query Frame = 0


Query: 1   MDGGEENDLNEPSLSNDQETPQQDVIAVSSSSSSFSSSSSENELHETRNENAQSQSNGNP 60
           M GGEENDLNEPSLSN QET QQDVIAVSSSSSSFSSSSSE+ELHETRNEN QSQSN N 
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVIYNPSAND-GDANEPVSTPVKQQRASLVGHSTPNSSRILPSVGAFTVQCASCFKW 120
           SRELV+YNPSAND G A+EPVSTPV+ QR  L+GH TPNSSR+L  VGAFTVQCASCFKW
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVL-RVGAFTVQCASCFKW 120

Query: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPP 180
           RLIPTKEKYEEIREHLLE+PFYCETAREWRPDISC+DPADITQD  RLWAIDKPNIAQPP
Sbjct: 121 RLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPP 180

Query: 181 PGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQTEDVSMTRFSFQI 240
           PGWQRLLHIRGEGSTKFADVYYIAPSGK+LRSMVDIQKYLIEHPEYQTE V MTRFSFQ 
Sbjct: 181 PGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQT 240

Query: 241 PKPLRENYVRKRRPNMNASCDGSKLESGEVHPISWARPDDSTALQLGKPGLSELLSTAPV 300
           PKPL+ENYVRKRR NMNASCDGSKLESGEV+PISWARPD+ST LQLG+PGLSEL  TAPV
Sbjct: 241 PKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTGLQLGRPGLSELFPTAPV 300

Query: 301 DNPVTRPAKKVKRALAKEMRRSSLASTEPPAVKLERCFDQYEK 343
           DN V++PAKK KRA+ KEM  SSLASTEPP + LER F++Y+K
Sbjct: 301 DNRVSQPAKKAKRAVTKEM-HSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of Lsi11G008100 vs. NCBI nr
Match: XP_004150390.1 (methyl-CpG-binding domain-containing protein 2 [Cucumis sativus] >XP_031737021.1 methyl-CpG-binding domain-containing protein 2 [Cucumis sativus] >KGN61193.1 hypothetical protein Csa_006529 [Cucumis sativus])

HSP 1 Score: 626.7 bits (1615), Expect = 1.2e-175
Identity = 312/342 (91.23%), Postives = 327/342 (95.61%), Query Frame = 0


Query: 1   MDGGEENDLNEPSLSNDQETPQQDVIAVSSSSSSFSSSSSENELHETRNENAQSQSNGNP 60
           M GGEENDLNEPSLSNDQETP+QDVIAVSSSSSS SSSSSENELHETRNEN QSQSN NP
Sbjct: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENVQSQSNDNP 60

Query: 61  SRELVIYNPSANDGDANEPVSTPVKQQRASLVGHSTPNSSRILPSVGAFTVQCASCFKWR 120
           SRELVIY+PSA+DG AN+PVSTPVKQQ + ++GH TPNSSR+LPSVGAFTVQCA CFKWR
Sbjct: 61  SRELVIYDPSADDGHANDPVSTPVKQQPSPVLGHLTPNSSRVLPSVGAFTVQCAGCFKWR 120

Query: 121 LIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPP 180
           LIPTKEKYEEIREHLLE+PFYCETAR WRPDISCDDPADITQDGSRLWAIDKPNIAQPPP
Sbjct: 121 LIPTKEKYEEIREHLLEKPFYCETARGWRPDISCDDPADITQDGSRLWAIDKPNIAQPPP 180

Query: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQTEDVSMTRFSFQIP 240
           GWQRLLHIRGEGSTKFADVYY APSGKKLRSMVDIQKYLIEHPEYQTE VSMTRFSFQIP
Sbjct: 181 GWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQIP 240

Query: 241 KPLRENYVRKRRPNMNASCDGSKLESGEVHPISWARPDDSTALQLGKPGLSELLSTAPVD 300
           KPLRE+YVRKRRPNMNASCD SKLESGEV PISWARPDDSTALQLGKPGL+ELLST+PV+
Sbjct: 241 KPLREDYVRKRRPNMNASCDASKLESGEVRPISWARPDDSTALQLGKPGLTELLSTSPVN 300

Query: 301 NPVTRPAKKVKRALAKEMRRSSLASTEPPAVKLERCFDQYEK 343
           NPVTRPAKKVKRALA+EMRRSSL STEPPA+KLERCFDQYEK
Sbjct: 301 NPVTRPAKKVKRALAQEMRRSSLTSTEPPAIKLERCFDQYEK 342

[Close]

BLAST of Lsi11G008100 vs. NCBI nr
Match: XP_038890273.1 (methyl-CpG-binding domain-containing protein 2 isoform X1 [Benincasa hispida] >XP_038890274.1 methyl-CpG-binding domain-containing protein 2 isoform X1 [Benincasa hispida] >XP_038890275.1 methyl-CpG-binding domain-containing protein 2 isoform X1 [Benincasa hispida] >XP_038890276.1 methyl-CpG-binding domain-containing protein 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 616.3 bits (1588), Expect = 1.6e-172
Identity = 314/356 (88.20%), Postives = 324/356 (91.01%), Query Frame = 0


Query: 1   MDGGEENDLNEPSLSNDQETPQQDVIAVSSSSSSFSSSSSENELHETRNE---------- 60
           M GGEENDLNEPSLSN QETP+QDV AVSS SSS SSSS ENELHE RNE          
Sbjct: 1   MVGGEENDLNEPSLSNGQETPRQDVRAVSSFSSSLSSSSFENELHEPRNENAQSQSNENP 60

Query: 61  ----NAQSQSNGNPSRELVIYNPSANDGDANEPVSTPVKQQRASLVGHSTPNSSRILPSV 120
               NAQSQSN NPSRELV+Y+ SANDG ANEPVSTPV+ QR  L+GH TPNSSR+LPSV
Sbjct: 61  SRNKNAQSQSNENPSRELVLYDSSANDGGANEPVSTPVEHQRPPLLGHLTPNSSRVLPSV 120

Query: 121 GAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSR 180
           GAFTVQCASCFKWRLIPTKEKYEEIREHLLE+PFYCETAREWRPDISCDDPADITQDGSR
Sbjct: 121 GAFTVQCASCFKWRLIPTKEKYEEIREHLLEKPFYCETAREWRPDISCDDPADITQDGSR 180

Query: 181 LWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQ 240
           LWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQ
Sbjct: 181 LWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQ 240

Query: 241 TEDVSMTRFSFQIPKPLRENYVRKRRPNMNASCDGSKLESGEVHPISWARPDDSTALQLG 300
           TE VSMTRFSFQIPKPLRENYVRKRRPNMNASCDGSKLESG VHPISWARPDDSTALQLG
Sbjct: 241 TEGVSMTRFSFQIPKPLRENYVRKRRPNMNASCDGSKLESGGVHPISWARPDDSTALQLG 300

Query: 301 KPGLSELLSTAPVDNPVTRPAKKVKRALAKEMRRSSLASTEPPAVKLERCFDQYEK 343
           KPGLSELL TAPVDNP+TRP KKVKRALA+EMRRSSLASTEPPAVKLERCFD+YEK
Sbjct: 301 KPGLSELLLTAPVDNPITRPVKKVKRALAREMRRSSLASTEPPAVKLERCFDKYEK 356

[Close]

BLAST of Lsi11G008100 vs. NCBI nr
Match: XP_008450795.1 (PREDICTED: methyl-CpG-binding domain-containing protein 2-like [Cucumis melo] >KAA0047569.1 methyl-CpG-binding domain-containing protein 2-like [Cucumis melo var. makuwa] >TYK14963.1 methyl-CpG-binding domain-containing protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 614.0 bits (1582), Expect = 7.9e-172
Identity = 308/342 (90.06%), Postives = 322/342 (94.15%), Query Frame = 0


Query: 1   MDGGEENDLNEPSLSNDQETPQQDVIAVSSSSSSFSSSSSENELHETRNENAQSQSNGNP 60
           M GGEENDLNEPSLSNDQETP+QDVIAVSSSSSS  SSSSENELHETRNEN QSQ N N 
Sbjct: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSL-SSSSENELHETRNENVQSQPNENS 60

Query: 61  SRELVIYNPSANDGDANEPVSTPVKQQRASLVGHSTPNSSRILPSVGAFTVQCASCFKWR 120
           SRELVIYNPSA DG AN+PV+TPVKQQ + L+GH TPNS+R+LPSVGAFTVQCA CFKWR
Sbjct: 61  SRELVIYNPSAKDGRANDPVATPVKQQPSPLLGHLTPNSTRVLPSVGAFTVQCAGCFKWR 120

Query: 121 LIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPP 180
           LIPTKEKYEEIREHLLEQPFYCETAREWRPDI+CDDPADITQDGSRLWAIDKPNIAQPPP
Sbjct: 121 LIPTKEKYEEIREHLLEQPFYCETAREWRPDITCDDPADITQDGSRLWAIDKPNIAQPPP 180

Query: 181 GWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQTEDVSMTRFSFQIP 240
           GWQRLLHIRGEGSTKFADVYY APSGKKLRSMVDIQKYLIEHPEYQTE VSMTRFSFQIP
Sbjct: 181 GWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQIP 240

Query: 241 KPLRENYVRKRRPNMNASCDGSKLESGEVHPISWARPDDSTALQLGKPGLSELLSTAPVD 300
           KPLRE+YVRKRRPN+NASCD SKLESGEV PISWARPDDSTALQLGKPGL ELLST+PVD
Sbjct: 241 KPLREDYVRKRRPNINASCDASKLESGEVRPISWARPDDSTALQLGKPGLPELLSTSPVD 300

Query: 301 NPVTRPAKKVKRALAKEMRRSSLASTEPPAVKLERCFDQYEK 343
           +PVTRPAKKVKRAL +EMRRSSLASTEPPA+KLE CFDQYEK
Sbjct: 301 HPVTRPAKKVKRALGQEMRRSSLASTEPPAIKLEGCFDQYEK 341

[Close]

BLAST of Lsi11G008100 vs. NCBI nr
Match: XP_022929597.1 (methyl-CpG-binding domain-containing protein 2-like [Cucurbita moschata] >XP_022929598.1 methyl-CpG-binding domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 574.7 bits (1480), Expect = 5.3e-160
Identity = 295/343 (86.01%), Postives = 315/343 (91.84%), Query Frame = 0


Query: 1   MDGGEENDLNEPSLSNDQETPQQDVIAVSSSSSSFSSSSSENELHETRNENAQSQSNGNP 60
           M GGEENDLNEPSLSN QET QQDVIAVSSSSSSFSSSSSE+ELHETRNEN QSQSN N 
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVIYNPSAND-GDANEPVSTPVKQQRASLVGHSTPNSSRILPSVGAFTVQCASCFKW 120
           SRELV+YNPSAND G A+EPVSTPV+ QR  L+GH TPNSSR+L  VGAFTVQCASCFKW
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVL-RVGAFTVQCASCFKW 120

Query: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPP 180
           RLIPTKEKYEEIREHLLE+PFYCETAREWRPDISC+DPADITQD  RLWAIDKPNIAQPP
Sbjct: 121 RLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPP 180

Query: 181 PGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQTEDVSMTRFSFQI 240
           PGWQRLLHIRGEGSTKFADVYYIAPSGK+LRSMVDIQKYLIEHPEYQTE V MTRFSFQ 
Sbjct: 181 PGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQT 240

Query: 241 PKPLRENYVRKRRPNMNASCDGSKLESGEVHPISWARPDDSTALQLGKPGLSELLSTAPV 300
           PKPL+ENYVRKRR NMNASCDGSKLESGEV+PISWARPD+STALQLG+PGLSEL  TAPV
Sbjct: 241 PKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPV 300

Query: 301 DNPVTRPAKKVKRALAKEMRRSSLASTEPPAVKLERCFDQYEK 343
           DN V++PAKK KRA+AKEM RSSLASTEPP + LER F++Y+K
Sbjct: 301 DNRVSQPAKKAKRAVAKEM-RSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of Lsi11G008100 vs. NCBI nr
Match: XP_023546682.1 (methyl-CpG-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo] >XP_023546683.1 methyl-CpG-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 573.2 bits (1476), Expect = 1.5e-159
Identity = 294/343 (85.71%), Postives = 314/343 (91.55%), Query Frame = 0


Query: 1   MDGGEENDLNEPSLSNDQETPQQDVIAVSSSSSSFSSSSSENELHETRNENAQSQSNGNP 60
           M GGEENDLNEPSLSN QET QQDVIAVSSSSSSFSSSSSE+ELHETRNEN QSQSN N 
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVIYNPSAND-GDANEPVSTPVKQQRASLVGHSTPNSSRILPSVGAFTVQCASCFKW 120
           SRELV+YNPSAND G A+EPVSTPV+ QR  L+GH TPNSSR+L  VGAFTVQCASCFKW
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQRPPLLGHLTPNSSRVL-RVGAFTVQCASCFKW 120

Query: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPP 180
           RLIPTKEKYEEIREHLLE+PFYCETAREWRPDISC+DPADITQD  RLWAIDKPNIAQPP
Sbjct: 121 RLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQPP 180

Query: 181 PGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQTEDVSMTRFSFQI 240
           PGWQRLLHIRGEGSTKFADVYYIAPSGK+LRSMVDIQKYLIEHPEYQTE V MTRFSFQ 
Sbjct: 181 PGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQT 240

Query: 241 PKPLRENYVRKRRPNMNASCDGSKLESGEVHPISWARPDDSTALQLGKPGLSELLSTAPV 300
           PKPL+ENYVRKRR NMNASCDGSKLESGEV+PISWARPD+STALQLG+PGLSEL  TAPV
Sbjct: 241 PKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAPV 300

Query: 301 DNPVTRPAKKVKRALAKEMRRSSLASTEPPAVKLERCFDQYEK 343
           DN  ++PAKK KRA+AKEM RSSLASTEPP + LER F++Y+K
Sbjct: 301 DNRASQPAKKAKRAVAKEM-RSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of Lsi11G008100 vs. TAIR 10
Match: AT5G35330.1 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-74
Identity = 156/284 (54.93%), Postives = 193/284 (67.96%), Query Frame = 0


Query: 30  SSSSSFSSSSSENELHETRNENAQSQSNGNPSRELVIYNPSANDGDANEPVSTPVKQQRA 89
           S S +   SSS N   E R EN           +LV+Y+   ND D  E V  PV+ Q  
Sbjct: 4   SQSRAVQRSSSPN---EDRGEN-----------QLVVYDLKGND-DTEEEV-LPVQSQ-- 63

Query: 90  SLVGHSTPNSSRI-LPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFYCETAREW 149
                  P SSR   PS+GAFTVQCASCFKWRL+P+ +KYEEIRE LLE PF+C+TAREW
Sbjct: 64  -------PLSSRTQCPSIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREW 123

Query: 150 RPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKK 209
           +PDISCD PADI QDG+RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYY+APSGKK
Sbjct: 124 KPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKK 183

Query: 210 LRSMVDIQKYLIEHPEYQTEDVSMTRFSFQIPKPLRENYVRKRRPNMNASCDGSKLE-SG 269
           LRS V++QKYL ++ EY  E V +++FSFQIPKPL+++YVRKR   +  S D +    + 
Sbjct: 184 LRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQDDYVRKRPARLLDSIDNTNTPVAK 243

Query: 270 EVHPISWARPDDSTALQLGKPGLSELLSTAPVDNPVTRPAKKVK 312
           E +P++W  PDD  +LQLG P  S L      +N   +P+KK K
Sbjct: 244 EANPLAWISPDDHISLQLGTPTESGL------NNSHYQPSKKKK 256

[Close]

BLAST of Lsi11G008100 vs. TAIR 10
Match: AT5G35330.2 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-74
Identity = 156/284 (54.93%), Postives = 193/284 (67.96%), Query Frame = 0


Query: 30  SSSSSFSSSSSENELHETRNENAQSQSNGNPSRELVIYNPSANDGDANEPVSTPVKQQRA 89
           S S +   SSS N   E R EN           +LV+Y+   ND D  E V  PV+ Q  
Sbjct: 4   SQSRAVQRSSSPN---EDRGEN-----------QLVVYDLKGND-DTEEEV-LPVQSQ-- 63

Query: 90  SLVGHSTPNSSRI-LPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFYCETAREW 149
                  P SSR   PS+GAFTVQCASCFKWRL+P+ +KYEEIRE LLE PF+C+TAREW
Sbjct: 64  -------PLSSRTQCPSIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREW 123

Query: 150 RPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKK 209
           +PDISCD PADI QDG+RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYY+APSGKK
Sbjct: 124 KPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKK 183

Query: 210 LRSMVDIQKYLIEHPEYQTEDVSMTRFSFQIPKPLRENYVRKRRPNMNASCDGSKLE-SG 269
           LRS V++QKYL ++ EY  E V +++FSFQIPKPL+++YVRKR   +  S D +    + 
Sbjct: 184 LRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQDDYVRKRPARLLDSIDNTNTPVAK 243

Query: 270 EVHPISWARPDDSTALQLGKPGLSELLSTAPVDNPVTRPAKKVK 312
           E +P++W  PDD  +LQLG P  S L      +N   +P+KK K
Sbjct: 244 EANPLAWISPDDHISLQLGTPTESGL------NNSHYQPSKKKK 256

[Close]

BLAST of Lsi11G008100 vs. TAIR 10
Match: AT5G35330.3 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-74
Identity = 156/284 (54.93%), Postives = 193/284 (67.96%), Query Frame = 0


Query: 30  SSSSSFSSSSSENELHETRNENAQSQSNGNPSRELVIYNPSANDGDANEPVSTPVKQQRA 89
           S S +   SSS N   E R EN           +LV+Y+   ND D  E V  PV+ Q  
Sbjct: 4   SQSRAVQRSSSPN---EDRGEN-----------QLVVYDLKGND-DTEEEV-LPVQSQ-- 63

Query: 90  SLVGHSTPNSSRI-LPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFYCETAREW 149
                  P SSR   PS+GAFTVQCASCFKWRL+P+ +KYEEIRE LLE PF+C+TAREW
Sbjct: 64  -------PLSSRTQCPSIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREW 123

Query: 150 RPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKK 209
           +PDISCD PADI QDG+RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYY+APSGKK
Sbjct: 124 KPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKK 183

Query: 210 LRSMVDIQKYLIEHPEYQTEDVSMTRFSFQIPKPLRENYVRKRRPNMNASCDGSKLE-SG 269
           LRS V++QKYL ++ EY  E V +++FSFQIPKPL+++YVRKR   +  S D +    + 
Sbjct: 184 LRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQDDYVRKRPARLLDSIDNTNTPVAK 243

Query: 270 EVHPISWARPDDSTALQLGKPGLSELLSTAPVDNPVTRPAKKVK 312
           E +P++W  PDD  +LQLG P  S L      +N   +P+KK K
Sbjct: 244 EANPLAWISPDDHISLQLGTPTESGL------NNSHYQPSKKKK 256

[Close]

BLAST of Lsi11G008100 vs. TAIR 10
Match: AT5G35338.2 (methyl-CPG-binding domain 12 )

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-35
Identity = 73/141 (51.77%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 111 VQCASCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAI 170
           VQC  C KWRLIP+ + Y  I+E  L+ PF C T   W P++SC+ P D T   +  W  
Sbjct: 2   VQCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQDGTTCDT--W-- 61

Query: 171 DKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEYQTEDV 230
             P+I   P GW R +HIR E STKFADVYY  PSG++LRS  ++Q +L  HPEY  E V
Sbjct: 62  --PSIPPIPTGWSRSVHIRSE-STKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGV 121

Query: 231 SMTRFSFQIPKPLRENYVRKR 252
           + ++FSFQIPKPL +NYV+KR
Sbjct: 122 NRSQFSFQIPKPLDDNYVKKR 135

[Close]

BLAST of Lsi11G008100 vs. TAIR 10
Match: AT3G63030.1 (methyl-CPG-binding domain 4 )

HSP 1 Score: 115.9 bits (289), Expect = 6.3e-26
Identity = 54/140 (38.57%), Postives = 87/140 (62.14%), Query Frame = 0


Query: 106 VGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGS 165
           +  +  QC +C KWR+I ++E+YE+IR  +LE PF C+     +  +SC++PADI  D S
Sbjct: 25  IDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQK----KQGMSCEEPADIDYDSS 84

Query: 166 RLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEY 225
           R W IDKP + + P G++R L +R + S    D YY  P+GKKLRS  +I  ++  +PE+
Sbjct: 85  RTWVIDKPGLPKTPKGFKRSLVLRKDYSK--MDTYYFTPTGKKLRSRNEIAAFVEANPEF 144

Query: 226 QTEDVSMTRFSFQIPKPLRE 246
           +  +  +  F+F +PK + +
Sbjct: 145 R--NAPLGDFNFTVPKVMED 156

The following BLAST results are available for this feature:

BLAST of Lsi11G008100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LA53	1.7e-73	54.93	Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9FZP6	2.1e-34	51.77	Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LYB9	8.8e-25	38.57	Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q5XEN5	9.7e-24	33.66	Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Lsi11G008100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHE0	5.7e-176	91.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062680 PE=4 SV=1	[more]
A0A5D3CST2	3.8e-172	90.06	Methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BR32	3.8e-172	90.06	methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1EN70	2.6e-160	86.01	methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita moschata OX=366...	[more]
A0A6J1K3E0	8.2e-159	85.13	methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of Lsi11G008100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150390.1	1.2e-175	91.23	methyl-CpG-binding domain-containing protein 2 [Cucumis sativus] >XP_031737021.1...	[more]
XP_038890273.1	1.6e-172	88.20	methyl-CpG-binding domain-containing protein 2 isoform X1 [Benincasa hispida] >X...	[more]
XP_008450795.1	7.9e-172	90.06	PREDICTED: methyl-CpG-binding domain-containing protein 2-like [Cucumis melo] >K...	[more]
XP_022929597.1	5.3e-160	86.01	methyl-CpG-binding domain-containing protein 2-like [Cucurbita moschata] >XP_022...	[more]
XP_023546682.1	1.5e-159	85.71	methyl-CpG-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo]...	[more]

BLAST of Lsi11G008100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35330.1	1.2e-74	54.93	methyl-CPG-binding domain protein 02	[more]
AT5G35330.2	1.2e-74	54.93	methyl-CPG-binding domain protein 02	[more]
AT5G35330.3	1.2e-74	54.93	methyl-CPG-binding domain protein 02	[more]
AT5G35338.2	1.5e-35	51.77	methyl-CPG-binding domain 12	[more]
AT3G63030.1	6.3e-26	38.57	methyl-CPG-binding domain 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001739	Methyl-CpG DNA binding	SMART	SM00391	TAM_2	coord: 172..247 e-value: 7.2E-8 score: 42.2
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 179..238 e-value: 5.0E-11 score: 42.1
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 168..242 score: 17.057789
None	No IPR available	GENE3D	3.30.890.10		coord: 162..267 e-value: 2.8E-20 score: 74.6
None	No IPR available	GENE3D	3.30.40.100		coord: 107..161 e-value: 2.2E-6 score: 29.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..66
None	No IPR available	PANTHER	PTHR12396:SF41	ZINC FINGER, CW-TYPE, DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 21..290
None	No IPR available	PANTHER	PTHR12396	METHYL-CPG BINDING PROTEIN, MBD	coord: 21..290
None	No IPR available	CDD	cd01396	MeCP2_MBD	coord: 172..251 e-value: 8.23436E-27 score: 99.3692
IPR011124	Zinc finger, CW-type	PFAM	PF07496	zf-CW	coord: 109..159 e-value: 9.1E-13 score: 48.0
IPR011124	Zinc finger, CW-type	PROSITE	PS51050	ZF_CW	coord: 103..162 score: 12.698874
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 147..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G008100.1	Lsi11G008100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding