Lsi11G008080 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G008080
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ribosomal RNA processing protein 1 homolog
Location	chr11: 9878142 .. 9879842 (-)
RNA-Seq Expression	Lsi11G008080
Synteny	Lsi11G008080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGCTGGTTGAAGGAGATCAAAATTTCACTTCATTGGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGTGACAAGACCCTCCGTGTAATCATCAAGACATGGCTTCCGACTCAAACGAGCCTTTCCGATGGCGATATGAAGAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCTGACAAGGTTCCTGTTCAATCTGAGCTTATTAATCGCCTCGCTTCTCTGCTCCTCCATCTCGACCTGCCTCTAGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACCATGCGTCGTGAATGGGCCGGCATTGATGCGCTCAGGTTAGATAAGTTTTACCTTTTGATTCGTCGATTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTGTGTCGTCGTTCGGTTCAAGTTTTGGAAGAGAGGGTGTTTTTTACTGATGATAAGTTTCATGGGAATGGTGTTAATTACCAAATTGCTACTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTATTGATGTCCTGTTCAAGCCATTCCTCTGTACCATGGCTAAACTGCCAGATAAAGTGTTGGTGGGAAAAATTAAGTCTAATCTTTTCGATGTGATACTTAAAATGGGGAAGCAATTACTTGAGCGTCGAAAATGTGGAGATGATGTTGATTCTGGTGATGATATGGTTGTGTTCGGGACAATTTCGTTGACAAATCTATTCTCAACAACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGATTCTGTTTGCCATGCACGAAGAGTATCAGAAGTTGGAGAAAGATTTTATCTCATCAGGAATTGAGATTTCGTTTCCAGATCTTCAAGAACAAGATGGGGATGAAGTGCCTACTTTGGTTCCTGTTTCCAGTGAAGAAGAGGTTCCTTCGGAAATTTCCATGGTTGATGTTGATGTGAATGCTGAATCCACTGATAAGGCACATAAGAAGCAAAAGAAGAATAAAAAGGCCACTGATGGCAGTGGCAAGAAGAAGGCCAAGAAGGCTAAGAAGGCAAAGAAGACAACAAACGGTATTTCTGATCTTGTTTCTGAAAATACTCCTATGAATAAGGACAATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAACTTTTGATGAAACTGTGATATCGAACCTTCAGATGCAATTTGAGAGGGTTGCTGCTGAAGCTGATTTTGGAGACAGTATTGTGAGCCCTGTAATATCAACCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAGTGTTGATGGGCTGCAGAAACATGATGTAGTACTTCCTAGTGAAGTCGACGCTGAAGGAAATACAGCTGCAAAAAGTGAAGAGAAGAGTGTAAAGAAGGTAAGGTTTTCAATGAAAAATAACTTGGTATGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCTGGTCCTATCTTGGAATTCACTGCCACAACTAAAAGGACAAAAAGGAGAGCGGTTGCAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAATTGAAAGCTAAGAGTACTTAG

mRNA sequence

ATGGAGGAGCTGGTTGAAGGAGATCAAAATTTCACTTCATTGGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGTGACAAGACCCTCCGTGTAATCATCAAGACATGGCTTCCGACTCAAACGAGCCTTTCCGATGGCGATATGAAGAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCTGACAAGGTTCCTGTTCAATCTGAGCTTATTAATCGCCTCGCTTCTCTGCTCCTCCATCTCGACCTGCCTCTAGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACCATGCGTCGTGAATGGGCCGGCATTGATGCGCTCAGGTTAGATAAGTTTTACCTTTTGATTCGTCGATTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTGTGTCGTCGTTCGGTTCAAGTTTTGGAAGAGAGGGTGTTTTTTACTGATGATAAGTTTCATGGGAATGGTGTTAATTACCAAATTGCTACTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTATTGATGTCCTGTTCAAGCCATTCCTCTGTACCATGGCTAAACTGCCAGATAAAGTGTTGGTGGGAAAAATTAAGTCTAATCTTTTCGATGTGATACTTAAAATGGGGAAGCAATTACTTGAGCGTCGAAAATGTGGAGATGATGTTGATTCTGGTGATGATATGGTTGTGTTCGGGACAATTTCGTTGACAAATCTATTCTCAACAACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGATTCTGTTTGCCATGCACGAAGAGTATCAGAAGTTGGAGAAAGATTTTATCTCATCAGGAATTGAGATTTCGTTTCCAGATCTTCAAGAACAAGATGGGGATGAAGTGCCTACTTTGGTTCCTGTTTCCAGTGAAGAAGAGGTTCCTTCGGAAATTTCCATGGTTGATGTTGATGTGAATGCTGAATCCACTGATAAGGCACATAAGAAGCAAAAGAAGAATAAAAAGGCCACTGATGGCAGTGGCAAGAAGAAGGCCAAGAAGGCTAAGAAGGCAAAGAAGACAACAAACGGTATTTCTGATCTTGTTTCTGAAAATACTCCTATGAATAAGGACAATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAACTTTTGATGAAACTGTGATATCGAACCTTCAGATGCAATTTGAGAGGGTTGCTGCTGAAGCTGATTTTGGAGACAGTATTGTGAGCCCTGTAATATCAACCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAGTGTTGATGGGCTGCAGAAACATGATGTAGTACTTCCTAGTGAAGTCGACGCTGAAGGAAATACAGCTGCAAAAAGTGAAGAGAAGAGTGTAAAGAAGGTAAGGTTTTCAATGAAAAATAACTTGGTATGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCTGGTCCTATCTTGGAATTCACTGCCACAACTAAAAGGACAAAAAGGAGAGCGGTTGCAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAATTGAAAGCTAAGAGTACTTAG

Coding sequence (CDS)

ATGGAGGAGCTGGTTGAAGGAGATCAAAATTTCACTTCATTGGTCAAGCTTTTGGCGTCCTCCAACAAGGCGACTCGTGACAAGACCCTCCGTGTAATCATCAAGACATGGCTTCCGACTCAAACGAGCCTTTCCGATGGCGATATGAAGAAGCTTTGGAAGGGTTTGTTCTACTGTGTTTGGCATGCTGACAAGGTTCCTGTTCAATCTGAGCTTATTAATCGCCTCGCTTCTCTGCTCCTCCATCTCGACCTGCCTCTAGCTGTTCAGTACTTCTCTGTTTTTCTTCTCACCATGCGTCGTGAATGGGCCGGCATTGATGCGCTCAGGTTAGATAAGTTTTACCTTTTGATTCGTCGATTTTTGCACCAGTTTTTTGCTTTGTTGAAGAAGCATTCTTGGGATTTGGAACTGTGTCGTCGTTCGGTTCAAGTTTTGGAAGAGAGGGTGTTTTTTACTGATGATAAGTTTCATGGGAATGGTGTTAATTACCAAATTGCTACTGTGTTTCTTGAGGAACTTAGGCCGTTTCTTCCTCTTCAGAAGGAAGTTATTGATGTCCTGTTCAAGCCATTCCTCTGTACCATGGCTAAACTGCCAGATAAAGTGTTGGTGGGAAAAATTAAGTCTAATCTTTTCGATGTGATACTTAAAATGGGGAAGCAATTACTTGAGCGTCGAAAATGTGGAGATGATGTTGATTCTGGTGATGATATGGTTGTGTTCGGGACAATTTCGTTGACAAATCTATTCTCAACAACATTTTATGAATTGGGTTCTTCACCTGATTGCTGTCAAGGGAATAGAAAGATTCTGTTTGCCATGCACGAAGAGTATCAGAAGTTGGAGAAAGATTTTATCTCATCAGGAATTGAGATTTCGTTTCCAGATCTTCAAGAACAAGATGGGGATGAAGTGCCTACTTTGGTTCCTGTTTCCAGTGAAGAAGAGGTTCCTTCGGAAATTTCCATGGTTGATGTTGATGTGAATGCTGAATCCACTGATAAGGCACATAAGAAGCAAAAGAAGAATAAAAAGGCCACTGATGGCAGTGGCAAGAAGAAGGCCAAGAAGGCTAAGAAGGCAAAGAAGACAACAAACGGTATTTCTGATCTTGTTTCTGAAAATACTCCTATGAATAAGGACAATGAGAATATAGTTGTTGCTAACGGTGAGAATTCTAATAATGAACAGATTAGTGATGGAAATATGATAACTTTTGATGAAACTGTGATATCGAACCTTCAGATGCAATTTGAGAGGGTTGCTGCTGAAGCTGATTTTGGAGACAGTATTGTGAGCCCTGTAATATCAACCAATGGCTCGGTCAAGAAAAGAAAGAGAGCAAAGAGTGTTGATGGGCTGCAGAAACATGATGTAGTACTTCCTAGTGAAGTCGACGCTGAAGGAAATACAGCTGCAAAAAGTGAAGAGAAGAGTGTAAAGAAGGTAAGGTTTTCAATGAAAAATAACTTGGTATGGAAACCCCATAATCCCTTACCACCTGAAAGTTTGAGACTGCCTCCCTCTGTTACTCCAAGGGGAAGTGCACTTAAGAAAGGAATACCTCCTGGTCCTATCTTGGAATTCACTGCCACAACTAAAAGGACAAAAAGGAGAGCGGTTGCAATGAGGGCTAAGAAAGGTGTAAGAAGCTTGCCTGTCAAACGTTTGAAGAAATTGAAAGCTAAGAGTACTTAG

Protein sequence

MEELVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLPLQKEVIDVLFKPFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLERRKCGDDVDSGDDMVVFGTISLTNLFSTTFYELGSSPDCCQGNRKILFAMHEEYQKLEKDFISSGIEISFPDLQEQDGDEVPTLVPVSSEEEVPSEISMVDVDVNAESTDKAHKKQKKNKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPMNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFERVAAEADFGDSIVSPVISTNGSVKKRKRAKSVDGLQKHDVVLPSEVDAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFTATTKRTKRRAVAMRAKKGVRSLPVKRLKKLKAKST

Homology

[Close]

BLAST of Lsi11G008080 vs. ExPASy Swiss-Prot
Match: Q91YK2 (Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b PE=1 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 6.5e-25
Identity = 80/228 (35.09%), Postives = 121/228 (53.07%), Query Frame = 0


Query: 18  LASSNKATRDKTLRVIIKTWLPTQT-----SLSDGDMKKLWKGLFYCVWHADKVPVQSEL 77
           LASS K  RD+ +R  ++ +L  +T     S S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGVRDRAVRK-LRQYLSARTQSDTGSFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 78  INRLASLLLHLDLPLAVQYFSV--FLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLK 137
            N + S L+H+   L  QY  +  F  TM REW GID L+LDK+Y+LIR  L Q F +LK
Sbjct: 76  AN-IISQLIHVVNSLEAQYLFIQTFWQTMNREWQGIDKLQLDKYYMLIRLVLRQSFEVLK 135

Query: 138 KHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPF--LPLQKEVIDVL 197
           +++W+       + +L + +   + +   NGV   +  V+LEEL       L  +    L
Sbjct: 136 RNAWEESQITLFLDILMKEILSPESQ-SPNGVRTHLIDVYLEELTTVGGAELLADQNLKL 195

Query: 198 FKPFLCTMAKLPDKVLVGKIKSNLFDVILKMG----KQLLERRKCGDD 233
             PF    AK  D  LV  +   +F+VI+       ++ +E RK  +D
Sbjct: 196 IDPFCRIAAKTKDHTLVQTVARGVFEVIVDQSACVPQESVEERKTKED 240

[Close]

BLAST of Lsi11G008080 vs. ExPASy Swiss-Prot
Match: Q14684 (Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE=1 SV=3)

HSP 1 Score: 108.6 bits (270), Expect = 2.3e-22
Identity = 73/208 (35.10%), Postives = 107/208 (51.44%), Query Frame = 0


Query: 18  LASSNKATRDKTLR-----VIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSEL 77
           LASS K  RD+ ++     + +KT   T    S  ++ K+WKGLFYC+W  D+  +Q EL
Sbjct: 16  LASSEKGIRDRAVKKLRQYISVKTQRET-GGFSQEELLKIWKGLFYCMWVQDEPLLQEEL 75

Query: 78  INRLASLLLHLDLPLAVQYF-SVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKK 137
            N +A L+  ++   A   F   F  TM REW GID LRLDK+Y+LIR  L Q F +LK+
Sbjct: 76  ANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQSFEVLKR 135

Query: 138 HSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPF--LPLQKEVIDVLF 197
           + W+    +  + VL + V   + +   NGV +    ++L+EL       L  +      
Sbjct: 136 NGWEESRIKVFLDVLMKEVLCPESQ-SPNGVRFHFIDIYLDELSKVGGKELLADQNLKFI 195

Query: 198 KPFLCTMAKLPDKVLVGKIKSNLFDVIL 218
            PF    AK  D  LV  I   +F+ I+
Sbjct: 196 DPFCKIAAKTKDHTLVQTIARGVFEAIV 221

[Close]

BLAST of Lsi11G008080 vs. ExPASy Swiss-Prot
Match: P56183 (Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE=1 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 1.3e-20
Identity = 72/233 (30.90%), Postives = 113/233 (48.50%), Query Frame = 0


Query: 14  LVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKVPV 73
           L + LA + + TRD+ LR + K ++  ++  + G     ++ K+WKGLFYC+W  DK P+
Sbjct: 13  LAQRLAGNEQVTRDRALRKLRK-YIEARSQRATGGFTPDELLKVWKGLFYCMWMQDK-PL 72

Query: 74  QSELINRLASLLLHL--DLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFF 133
           Q E + R  + L+H         Q+   F  TM REW GID LRLDKFY+L+R  L +  
Sbjct: 73  QQEELGRTIAQLVHAFHTTEAQHQFLKAFWQTMIREWVGIDRLRLDKFYMLMRMVLSESL 132

Query: 134 ALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPF--LPLQKEV 193
             +K   WD     + +++L   +   D +   +GV      +FLEEL       L  + 
Sbjct: 133 KAVKARGWDERQIEQLLELLTTEILNPDSQ-APSGVKSHFLEIFLEELAKVGAAELTADQ 192

Query: 194 IDVLFKPFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLERRKCGDDVDSGD 238
                 PF    A+  D  ++ KI  ++F  I++     +E      D  SG+
Sbjct: 193 NLQFIDPFCQIAARTKDSQVLHKIIQSIFQTIVEQAPLAIEDIMNELDTQSGE 242

[Close]

BLAST of Lsi11G008080 vs. ExPASy Swiss-Prot
Match: P56182 (Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.7e-20
Identity = 69/222 (31.08%), Postives = 111/222 (50.00%), Query Frame = 0


Query: 14  LVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDG-----DMKKLWKGLFYCVWHADKVPV 73
           L + LA + + TRD+ +R + K ++  +T  + G     ++ K+WKGLFYC+W  DK P+
Sbjct: 13  LAQRLAGNEQVTRDRAVRKLRK-YIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDK-PL 72

Query: 74  QSELINRLASLLLHLDLPLAVQ--YFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFF 133
             E + R  S L+H       Q  +   F  TM REW GID LRLDKFY+L+R  L++  
Sbjct: 73  LQEELGRTISQLVHAFQTTEAQHLFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLNESL 132

Query: 134 ALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLPLQKEVID 193
            +LK   W+       +++L   +     +   NGV      +FLEEL   +  ++   D
Sbjct: 133 KVLKMQGWEERQIEELLELLMTEILHPSSQ-APNGVKSHFIEIFLEELTK-VGAEELTAD 192

Query: 194 VLFK---PFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLE 226
              K   PF    A+  D +++  I   +F+ I++     +E
Sbjct: 193 QNLKFIDPFCRIAARTKDSLVLNNITRGIFETIVEQAPLAIE 230

[Close]

BLAST of Lsi11G008080 vs. ExPASy Swiss-Prot
Match: Q9Y7M6 (Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC9B6.07 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.7e-20
Identity = 62/168 (36.90%), Postives = 94/168 (55.95%), Query Frame = 0


Query: 15  VKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVWHADKVPVQSELIN 74
           +K LA++++ TRDK L   ++ +L  +      D  KLWKGLFYC+W ADK   Q +L +
Sbjct: 8   IKKLAANDRKTRDKALE-SLQRFLSQKKKFERLDFLKLWKGLFYCMWMADKPLYQQKLSD 67

Query: 75  RLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRFLHQFFALLKKHSW 134
            LA+L+  + +   + + S F  TM REW GID LR DKFYLL+RRF    F  ++  S 
Sbjct: 68  NLAALVPIVWIDNRILFQSTFWETMGREWTGIDILRTDKFYLLMRRFCAAAFRDIQTRSK 127

Query: 135 DL---ELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLP 180
                ++     Q+  +  F T++    NG+ + +A ++ EELR   P
Sbjct: 128 TALLDKVVAEYNQMWMDGPFNTENLAFPNGILFHLADIWTEELRKVYP 174

[Close]

BLAST of Lsi11G008080 vs. ExPASy TrEMBL
Match: A0A5A7U008 (Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00010 PE=4 SV=1)

HSP 1 Score: 1012.7 bits (2617), Expect = 6.1e-292
Identity = 528/566 (93.29%), Postives = 545/566 (96.29%), Query Frame = 0


Query: 1   MEELVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR  VQVLEERVFFTDDKFHGNGVNYQIA+VFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDVLFKPFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLERRKCGDDVDSGDDMV 240
           QKEV+DVLFKPFL +MAKLPDKVL GKIKSNLFDVILKMGKQLLE RK GDD+DSGDD  
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VFGTISLTNLFSTTFYELGSSPDCCQGNRKILFAMHEEYQKLEKDFISSGIEISFPDLQE 300
           V+GTISLTN FSTTFYELGSSPDCCQGNRK+LFAMHEE+QKLEKDF SSGIEISFPDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPVSSEEEVPSEISMVDVDVNAESTDKAHKKQKKNKKATDGSGKKKAKKAK 360
           QDGDEVPTLVP+ SEEE PSEISMVDVDV+AESTDKA KKQK++KKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENTPMNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAKKTTNGISDLVSEN+P NKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADFGDSIVSPVISTNGSVKKRKRAKSVDGLQKHDVVLPSEVDAEGNTAAKSEEKS 480
           +VAAEADFGDSIVSPVISTNGSVKKRKRAK+VD LQKHDV LPSE  AEGNTAAKSEEKS
Sbjct: 421 KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFTATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEF ATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVAMRAKKGVRSLPVKRLKKLKAKST 567
           AV+MR KKGVRSLPVKRLKKLK+KST
Sbjct: 541 AVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Lsi11G008080 vs. ExPASy TrEMBL
Match: A0A1S3BR64 (ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103492297 PE=4 SV=1)

HSP 1 Score: 1012.7 bits (2617), Expect = 6.1e-292
Identity = 528/566 (93.29%), Postives = 545/566 (96.29%), Query Frame = 0


Query: 1   MEELVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR  VQVLEERVFFTDDKFHGNGVNYQIA+VFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDVLFKPFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLERRKCGDDVDSGDDMV 240
           QKEV+DVLFKPFL +MAKLPDKVL GKIKSNLFDVILKMGKQLLE RK GDD+DSGDD  
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VFGTISLTNLFSTTFYELGSSPDCCQGNRKILFAMHEEYQKLEKDFISSGIEISFPDLQE 300
           V+GTISLTN FSTTFYELGSSPDCCQGNRK+LFAMHEE+QKLEKDF SSGIEISFPDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPVSSEEEVPSEISMVDVDVNAESTDKAHKKQKKNKKATDGSGKKKAKKAK 360
           QDGDEVPTLVP+ SEEE PSEISMVDVDV+AESTDKA KKQK++KKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENTPMNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAKKTTNGISDLVSEN+P NKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADFGDSIVSPVISTNGSVKKRKRAKSVDGLQKHDVVLPSEVDAEGNTAAKSEEKS 480
           +VAAEADFGDSIVSPVISTNGSVKKRKRAK+VD LQKHDV LPSE  AEGNTAAKSEEKS
Sbjct: 421 KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFTATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEF ATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVAMRAKKGVRSLPVKRLKKLKAKST 567
           AV+MR KKGVRSLPVKRLKKLK+KST
Sbjct: 541 AVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Lsi11G008080 vs. ExPASy TrEMBL
Match: A0A0A0LGX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062650 PE=4 SV=1)

HSP 1 Score: 993.0 bits (2566), Expect = 5.0e-286
Identity = 520/566 (91.87%), Postives = 537/566 (94.88%), Query Frame = 0


Query: 1   MEELVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRR VQVLEERV+F +DKFHGNGVNYQIA+VFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDVLFKPFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLERRKCGDDVDSGDDMV 240
           QKEV+DVLFKPFL +M KLPDKVL+GKIKSNLFDVILK GKQLLE RK GDDVDS DD V
Sbjct: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240

Query: 241 VFGTISLTNLFSTTFYELGSSPDCCQGNRKILFAMHEEYQKLEKDFISSGIEISFPDLQE 300
           V+GT+SLTN FSTTFYELGSSPDCCQGNRK+LFAMHEE+QKLEKDF SSGIEISFPDLQE
Sbjct: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPVSSEEEVPSEISMVDVDVNAESTDKAHKKQKKNKKATDGSGKKKAKKAK 360
           QDGDEVPTLVP+SS EE PSEIS+VDVDV  ESTDKA KKQKK+KKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENTPMNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAKKTTNGISDLVSENTP NKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADFGDSIVSPVISTNGSVKKRKRAKSVDGLQKHDVVLPSEVDAEGNTAAKSEEKS 480
           RVAAEADFG S VSPVISTNGSVKKRKRAK+V  LQKHD  LPSE  AEGNTAAKSEEKS
Sbjct: 421 RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFTATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEF ATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVAMRAKKGVRSLPVKRLKKLKAKST 567
           AV+MR K GVRSLPVKRLKKLK+KST
Sbjct: 541 AVSMRTKNGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Lsi11G008080 vs. ExPASy TrEMBL
Match: A0A6J1ENE5 (ribosomal RNA processing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111436194 PE=4 SV=1)

HSP 1 Score: 972.6 bits (2513), Expect = 7.0e-280
Identity = 513/596 (86.07%), Postives = 538/596 (90.27%), Query Frame = 0


Query: 1   MEELVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQ F SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKF+G+GVNYQIA+VFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDVLFKPFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLERRKCGDDVDSGDDMV 240
           QKEV+D+LFKPF+ +MAKL DKVL+GKIKSNLFDVILKMGKQLLERRKCG+DVDS DDMV
Sbjct: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240

Query: 241 VFGTISLTNLFSTTFYELGSSPDCCQGNRKILFAMHEEYQKLEKDFISSGIEISFPDLQE 300
           V G+ISLTNLFSTTFY+LGSSPDCCQGNRK+LFAMHEEYQKLEKD ISSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPVSSEEEVPSEISMVDVDVNAESTDKAH---------------------- 360
           QD DEVPTLVPVSSEEEVPSEIS VDVD+ AESTDKAH                      
Sbjct: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360

Query: 361 --------KKQKKNKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPMNKDNENIVVAN 420
                   KKQKKNKKATDGSGK      KK KKTTNG SDLVSENT +NKDNENIV +N
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGK------KKTKKTTNGSSDLVSENTTVNKDNENIVASN 420

Query: 421 GENSNNEQISDGNMITFDETVISNLQMQFERVAAEADFGDSIVSPVISTNGSVKKRKRAK 480
           GENSNNEQI DGNMI  DE+VISNLQ+QFE+VA+EADFGD++VSPVISTNGSVKKRKRAK
Sbjct: 421 GENSNNEQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAK 480

Query: 481 SVDGLQKHDVVLPSEVDAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540
           +VDGLQKHDVVLPSEVDAEGNTA KS EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS
Sbjct: 481 NVDGLQKHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540

Query: 541 VTPRGSALKKGIPPGPILEFTATTKRTKRRAVAMRAKKGVRSLPVKRLKKLKAKST 567
           VTPRGSALKKGIPPGPILEF AT KRTKRRAVAMRAKKGVRSLPVKR+KKLK+KST
Sbjct: 541 VTPRGSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of Lsi11G008080 vs. ExPASy TrEMBL
Match: A0A6J1D805 (ribosomal RNA processing protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC111018204 PE=4 SV=1)

HSP 1 Score: 967.6 bits (2500), Expect = 2.2e-278
Identity = 504/568 (88.73%), Postives = 537/568 (94.54%), Query Frame = 0


Query: 1   MEELVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEELVEGDQ+FTSL+K LASSNKATRDKTLR+I+KTWLP QTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEELVEGDQDFTSLIKHLASSNKATRDKTLRLIVKTWLPIQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRL++LLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKFPVQSELINRLSALLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLPL 180
           FLHQFFAL+KKHSWDLELCRR +QVLEERVFFTDDKFHGNGVNY IA+VFLEELRPFLPL
Sbjct: 121 FLHQFFALMKKHSWDLELCRRLIQVLEERVFFTDDKFHGNGVNYHIASVFLEELRPFLPL 180

Query: 181 QKEVIDVLFKPFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLERRKCGDDVDSGDDMV 240
           +KEV+DVLFKPFL +MAKLPDKVL+GKIKSNLFDV+LKMGKQLLE RKCGDDVDSGDD+V
Sbjct: 181 RKEVVDVLFKPFLLSMAKLPDKVLMGKIKSNLFDVLLKMGKQLLEHRKCGDDVDSGDDIV 240

Query: 241 VFGTISLTNLFSTTFYELGSSPDCCQGNRKILFAMHEEYQKLEKDFISSGIEISFPDLQE 300
           V+GT+SLTNLFS+TFYELGSSP+CCQGNRK+LFA+HEEYQKLEKDFISSGIEIS PDL E
Sbjct: 241 VYGTLSLTNLFSSTFYELGSSPECCQGNRKVLFALHEEYQKLEKDFISSGIEISIPDLHE 300

Query: 301 QDGDEVPTLVPVSSEEEVPSEISMVDVDVNAESTDKAHKKQKKNKKATDGSG-KKKAKKA 360
           QDGDEVPTLVPVSSEEE PS+ISMVDVDV  ESTDKA KKQKKNKKATD SG KKKAKKA
Sbjct: 301 QDGDEVPTLVPVSSEEEAPSDISMVDVDVTEESTDKALKKQKKNKKATDVSGKKKKAKKA 360

Query: 361 KKAKKTTNGISDLVSENTPMNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQF 420
           KKAKKT NGISDLVSENTPMNKDNENI VANGENSNNEQISDGNMI FDE+VISNLQMQF
Sbjct: 361 KKAKKTMNGISDLVSENTPMNKDNENI-VANGENSNNEQISDGNMINFDESVISNLQMQF 420

Query: 421 ERVAAEADFGDSIVSPVISTNGSVKKRKRAKSVDGLQK-HDVVLPSEVDAEGNTAAKSEE 480
           ERVAAEADF DS+V PV+S NGSVKKRKRAK+ DG Q+ H +VLPS+VDAE N AAKS E
Sbjct: 421 ERVAAEADFEDSVVGPVVSANGSVKKRKRAKNADGQQQTHGLVLPSQVDAEENAAAKSGE 480

Query: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFTATTKRTK 540
           KSVKKVRFSMKNNLVWKPHNPLPPESLRLPP+VTPRGSALKKGIPPGPILEF   TKRTK
Sbjct: 481 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPTVTPRGSALKKGIPPGPILEFPVATKRTK 540

Query: 541 RRAVAMRAKKGVRSLPVKRLKKLKAKST 567
           RRAVAMR+KKGVRSLPVKRLKKLK+K+T
Sbjct: 541 RRAVAMRSKKGVRSLPVKRLKKLKSKTT 567

[Close]

BLAST of Lsi11G008080 vs. NCBI nr
Match: XP_038875379.1 (ribosomal RNA processing protein 1 homolog [Benincasa hispida])

HSP 1 Score: 1018.5 bits (2632), Expect = 2.3e-293
Identity = 528/566 (93.29%), Postives = 548/566 (96.82%), Query Frame = 0


Query: 1   MEELVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQ SLSDGDMKKLWKGLFYC+
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQKSLSDGDMKKLWKGLFYCI 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR SVQVLEERVFF DDKFHGNGVNYQIA+VFLEEL+PFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCSVQVLEERVFFADDKFHGNGVNYQIASVFLEELKPFLPL 180

Query: 181 QKEVIDVLFKPFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLERRKCGDDVDSGDDMV 240
           QKEVIDVLFKPFLC+M KLPDKVL+GKIKSNLFDVILKMGKQLL+RRKCGDDVDSGDD+V
Sbjct: 181 QKEVIDVLFKPFLCSMVKLPDKVLLGKIKSNLFDVILKMGKQLLDRRKCGDDVDSGDDIV 240

Query: 241 VFGTISLTNLFSTTFYELGSSPDCCQGNRKILFAMHEEYQKLEKDFISSGIEISFPDLQE 300
           VFGTIS TNLFSTTFYELGSSPDCCQGNRK+LFAMHEE+QKLEKDFISSG+EIS P LQE
Sbjct: 241 VFGTISFTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFISSGVEISLPGLQE 300

Query: 301 QDGDEVPTLVPVSSEEEVPSEISMVDVDVNAESTDKAHKKQKKNKKATDGSGKKKAKKAK 360
           QDGDEVPTLVPVSSEEE PSEISMVDVDVNA+STDKA KKQKK+KKATD SGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPVSSEEEAPSEISMVDVDVNADSTDKALKKQKKSKKATDDSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENTPMNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAK+TTNGISDLVSENTP+NKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKETTNGISDLVSENTPVNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADFGDSIVSPVISTNGSVKKRKRAKSVDGLQKHDVVLPSEVDAEGNTAAKSEEKS 480
           R AAEADF DS  SPV+S NGSVKKRKRAK+VDG QKH+VVL S+VDAEGNTAAKSEEKS
Sbjct: 421 RAAAEADFEDSFASPVMSANGSVKKRKRAKNVDGSQKHEVVLSSQVDAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFTATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEF ATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVAMRAKKGVRSLPVKRLKKLKAKST 567
           AVAMRAKKGVRSLPVKRLKKLK+KST
Sbjct: 541 AVAMRAKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Lsi11G008080 vs. NCBI nr
Match: XP_008450828.1 (PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo] >KAA0047556.1 ribosomal RNA processing protein 1-like protein [Cucumis melo var. makuwa] >TYK14953.1 ribosomal RNA processing protein 1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1012.7 bits (2617), Expect = 1.3e-291
Identity = 528/566 (93.29%), Postives = 545/566 (96.29%), Query Frame = 0


Query: 1   MEELVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCR  VQVLEERVFFTDDKFHGNGVNYQIA+VFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRCLVQVLEERVFFTDDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDVLFKPFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLERRKCGDDVDSGDDMV 240
           QKEV+DVLFKPFL +MAKLPDKVL GKIKSNLFDVILKMGKQLLE RK GDD+DSGDD  
Sbjct: 181 QKEVVDVLFKPFLLSMAKLPDKVLFGKIKSNLFDVILKMGKQLLESRKRGDDIDSGDDTA 240

Query: 241 VFGTISLTNLFSTTFYELGSSPDCCQGNRKILFAMHEEYQKLEKDFISSGIEISFPDLQE 300
           V+GTISLTN FSTTFYELGSSPDCCQGNRK+LFAMHEE+QKLEKDF SSGIEISFPDLQE
Sbjct: 241 VYGTISLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPVSSEEEVPSEISMVDVDVNAESTDKAHKKQKKNKKATDGSGKKKAKKAK 360
           QDGDEVPTLVP+ SEEE PSEISMVDVDV+AESTDKA KKQK++KKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPILSEEEAPSEISMVDVDVDAESTDKALKKQKRSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENTPMNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAKKTTNGISDLVSEN+P NKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENSPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADFGDSIVSPVISTNGSVKKRKRAKSVDGLQKHDVVLPSEVDAEGNTAAKSEEKS 480
           +VAAEADFGDSIVSPVISTNGSVKKRKRAK+VD LQKHDV LPSE  AEGNTAAKSEEKS
Sbjct: 421 KVAAEADFGDSIVSPVISTNGSVKKRKRAKNVDELQKHDVALPSEAQAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFTATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEF ATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVAMRAKKGVRSLPVKRLKKLKAKST 567
           AV+MR KKGVRSLPVKRLKKLK+KST
Sbjct: 541 AVSMRTKKGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Lsi11G008080 vs. NCBI nr
Match: XP_004150388.1 (ribosomal RNA processing protein 1 homolog [Cucumis sativus])

HSP 1 Score: 993.0 bits (2566), Expect = 1.0e-285
Identity = 520/566 (91.87%), Postives = 537/566 (94.88%), Query Frame = 0


Query: 1   MEELVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADKVPVQSELINRLASLLLHLDL LAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKVPVQSELINRLASLLLHLDLSLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRR VQVLEERV+F +DKFHGNGVNYQIA+VFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRLVQVLEERVYFNEDKFHGNGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDVLFKPFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLERRKCGDDVDSGDDMV 240
           QKEV+DVLFKPFL +M KLPDKVL+GKIKSNLFDVILK GKQLLE RK GDDVDS DD V
Sbjct: 181 QKEVVDVLFKPFLLSMTKLPDKVLLGKIKSNLFDVILKKGKQLLESRKRGDDVDSVDDTV 240

Query: 241 VFGTISLTNLFSTTFYELGSSPDCCQGNRKILFAMHEEYQKLEKDFISSGIEISFPDLQE 300
           V+GT+SLTN FSTTFYELGSSPDCCQGNRK+LFAMHEE+QKLEKDF SSGIEISFPDLQE
Sbjct: 241 VYGTVSLTNQFSTTFYELGSSPDCCQGNRKVLFAMHEEFQKLEKDFFSSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPVSSEEEVPSEISMVDVDVNAESTDKAHKKQKKNKKATDGSGKKKAKKAK 360
           QDGDEVPTLVP+SS EE PSEIS+VDVDV  ESTDKA KKQKK+KKATDGSGKKKAKKAK
Sbjct: 301 QDGDEVPTLVPISSIEEAPSEISLVDVDVGTESTDKALKKQKKSKKATDGSGKKKAKKAK 360

Query: 361 KAKKTTNGISDLVSENTPMNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420
           KAKKTTNGISDLVSENTP NKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE
Sbjct: 361 KAKKTTNGISDLVSENTPANKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 420

Query: 421 RVAAEADFGDSIVSPVISTNGSVKKRKRAKSVDGLQKHDVVLPSEVDAEGNTAAKSEEKS 480
           RVAAEADFG S VSPVISTNGSVKKRKRAK+V  LQKHD  LPSE  AEGNTAAKSEEKS
Sbjct: 421 RVAAEADFGKSTVSPVISTNGSVKKRKRAKNVGELQKHDAGLPSEAVAEGNTAAKSEEKS 480

Query: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFTATTKRTKRR 540
           VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEF ATTKRTKRR
Sbjct: 481 VKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFPATTKRTKRR 540

Query: 541 AVAMRAKKGVRSLPVKRLKKLKAKST 567
           AV+MR K GVRSLPVKRLKKLK+KST
Sbjct: 541 AVSMRTKNGVRSLPVKRLKKLKSKST 566

[Close]

BLAST of Lsi11G008080 vs. NCBI nr
Match: XP_022929687.1 (ribosomal RNA processing protein 1 homolog [Cucurbita moschata] >XP_022929688.1 ribosomal RNA processing protein 1 homolog [Cucurbita moschata])

HSP 1 Score: 972.6 bits (2513), Expect = 1.4e-279
Identity = 513/596 (86.07%), Postives = 538/596 (90.27%), Query Frame = 0


Query: 1   MEELVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQ F SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKF+G+GVNYQIA+VFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFYGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDVLFKPFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLERRKCGDDVDSGDDMV 240
           QKEV+D+LFKPF+ +MAKL DKVL+GKIKSNLFDVILKMGKQLLERRKCG+DVDS DDMV
Sbjct: 181 QKEVVDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSDDDMV 240

Query: 241 VFGTISLTNLFSTTFYELGSSPDCCQGNRKILFAMHEEYQKLEKDFISSGIEISFPDLQE 300
           V G+ISLTNLFSTTFY+LGSSPDCCQGNRK+LFAMHEEYQKLEKD ISSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYDLGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPVSSEEEVPSEISMVDVDVNAESTDKAH---------------------- 360
           QD DEVPTLVPVSSEEEVPSEIS VDVD+ AESTDKAH                      
Sbjct: 301 QDVDEVPTLVPVSSEEEVPSEISAVDVDITAESTDKAHKKKKKHKKATPSEISMLDVDLT 360

Query: 361 --------KKQKKNKKATDGSGKKKAKKAKKAKKTTNGISDLVSENTPMNKDNENIVVAN 420
                   KKQKKNKKATDGSGK      KK KKTTNG SDLVSENT +NKDNENIV +N
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGK------KKTKKTTNGSSDLVSENTTVNKDNENIVASN 420

Query: 421 GENSNNEQISDGNMITFDETVISNLQMQFERVAAEADFGDSIVSPVISTNGSVKKRKRAK 480
           GENSNNEQI DGNMI  DE+VISNLQ+QFE+VA+EADFGD++VSPVISTNGSVKKRKRAK
Sbjct: 421 GENSNNEQIGDGNMIALDESVISNLQIQFEKVASEADFGDNVVSPVISTNGSVKKRKRAK 480

Query: 481 SVDGLQKHDVVLPSEVDAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540
           +VDGLQKHDVVLPSEVDAEGNTA KS EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS
Sbjct: 481 NVDGLQKHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPS 540

Query: 541 VTPRGSALKKGIPPGPILEFTATTKRTKRRAVAMRAKKGVRSLPVKRLKKLKAKST 567
           VTPRGSALKKGIPPGPILEF AT KRTKRRAVAMRAKKGVRSLPVKR+KKLK+KST
Sbjct: 541 VTPRGSALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of Lsi11G008080 vs. NCBI nr
Match: XP_023546269.1 (ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023546270.1 ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023546272.1 ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 969.5 bits (2505), Expect = 1.2e-278
Identity = 514/590 (87.12%), Postives = 538/590 (91.19%), Query Frame = 0


Query: 1   MEELVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60
           MEE+VEGDQ F SLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV
Sbjct: 1   MEEVVEGDQYFVSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCV 60

Query: 61  WHADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120
           WHADK PVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR
Sbjct: 61  WHADKAPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRR 120

Query: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLPL 180
           FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKF G+GVNYQIA+VFLEELRPFLPL
Sbjct: 121 FLHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFPGSGVNYQIASVFLEELRPFLPL 180

Query: 181 QKEVIDVLFKPFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLERRKCGDDVDSGDDMV 240
           QKEVID+LFKPF+ +MAKL DKVL+GKIKSNLFDVILKMGKQLLERRKCG+DVDSGDDMV
Sbjct: 181 QKEVIDILFKPFIYSMAKLSDKVLLGKIKSNLFDVILKMGKQLLERRKCGEDVDSGDDMV 240

Query: 241 VFGTISLTNLFSTTFYELGSSPDCCQGNRKILFAMHEEYQKLEKDFISSGIEISFPDLQE 300
           V G+ISLTNLFSTTFYELGSSPDCCQGNRK+LFAMHEEYQKLEKD ISSGIEISFPDLQE
Sbjct: 241 VLGSISLTNLFSTTFYELGSSPDCCQGNRKVLFAMHEEYQKLEKDIISSGIEISFPDLQE 300

Query: 301 QDGDEVPTLVPVSSEEEVPSEISMVDVDVNAESTDKAHKKQKKNKKATDG---------- 360
           QD DEVPTLVPVSSE E PSEIS VDVD+ AESTDKAHKK+KKNKKAT            
Sbjct: 301 QDVDEVPTLVPVSSEGEAPSEISAVDVDITAESTDKAHKKKKKNKKATPSEISMLDVDLT 360

Query: 361 --------SGKKKAKKA------KKAKKTTNGISDLVSENTPMNKDNENIVVANGENSNN 420
                     +KK KKA      KK KKTTNG SDLVSENT +NKDNENIV +NGENSNN
Sbjct: 361 AESTDKPLKKQKKNKKATDGSGKKKTKKTTNGSSDLVSENTTVNKDNENIVASNGENSNN 420

Query: 421 EQISDGNMITFDETVISNLQMQFERVAAEADFGDSIVSPVISTNGSVKKRKRAKSVDGLQ 480
           EQISDGNMI  DE+VISNLQ+QFERVA+EADFGD+++SPVISTNGSVKKRKRAK+VDGLQ
Sbjct: 421 EQISDGNMIALDESVISNLQIQFERVASEADFGDNLLSPVISTNGSVKKRKRAKNVDGLQ 480

Query: 481 KHDVVLPSEVDAEGNTAAKSEEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540
           KHDVVLPSEVDAEGNTA KS EKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS
Sbjct: 481 KHDVVLPSEVDAEGNTAVKSGEKSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGS 540

Query: 541 ALKKGIPPGPILEFTATTKRTKRRAVAMRAKKGVRSLPVKRLKKLKAKST 567
           ALKKGIPPGPILEF AT KRTKRRAVAMRAKKGVRSLPVKR+KKLK+KST
Sbjct: 541 ALKKGIPPGPILEFPATAKRTKRRAVAMRAKKGVRSLPVKRVKKLKSKST 590

[Close]

BLAST of Lsi11G008080 vs. TAIR 10
Match: AT5G20600.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED IN: preribosome, small subunit precursor; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits to 530 proteins in 201 species: Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink). )

HSP 1 Score: 465.3 bits (1196), Expect = 7.0e-131
Identity = 275/562 (48.93%), Postives = 364/562 (64.77%), Query Frame = 0


Query: 2   EELVEGDQNFTSLVKLLASSNKATRDKTLRVIIKTWLPTQTSLSDGDMKKLWKGLFYCVW 61
           E+ +  +++  SL+K LAS  ++ RD++LR +++TWLP QT +SD DMKKLW+G+FYCVW
Sbjct: 11  EQALPIEEDCKSLIKKLASCKQSIRDRSLRTVLRTWLPEQTEISDEDMKKLWQGIFYCVW 70

Query: 62  HADKVPVQSELINRLASLLLHLDLPLAVQYFSVFLLTMRREWAGIDALRLDKFYLLIRRF 121
           HADK   QSELI+RL+S L  L LPL++ YF+VFL TMRREW+ ID LRLDKFYLLIRRF
Sbjct: 71  HADKSLYQSELIDRLSSALQSLPLPLSIHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRF 130

Query: 122 LHQFFALLKKHSWDLELCRRSVQVLEERVFFTDDKFHGNGVNYQIATVFLEELRPFLPLQ 181
           LH FF+L+  +SWDLE  RR + +L +     DDKF GNGVNY I + F+EELRPFLPL+
Sbjct: 131 LHGFFSLIDSNSWDLEFTRRLMGILFDGTLLADDKFQGNGVNYHITSAFVEELRPFLPLR 190

Query: 182 KEVIDVLFKPFLCTMAKLPDKVLVGKIKSNLFDVILKMGKQLLERRKCGDD-VDSGDDMV 241
           KEV+++LF PF+  M  + DK+LVGKIKSNLFD +LKMGK+LL  ++ GDD V   DD+V
Sbjct: 191 KEVLELLFAPFVKIMGVVNDKILVGKIKSNLFDELLKMGKKLLIIKQSGDDAVPEDDDVV 250

Query: 242 VFGTISLTNLFSTTFYELGSSPDCCQGNRKILFAMHEEYQKLEKDFISSGIEISFPDLQE 301
           V G+I+L+  F+  FYELGSSP+C QGNRK++FA+H+E+ +LEKD  SS IE+S  +   
Sbjct: 251 VLGSIALSMEFAKRFYELGSSPECHQGNRKLIFALHKEFLQLEKDMSSSSIEVSIVEASR 310

Query: 302 QDGDEVPTLVPVSSEEEVPSEISMVDVDVNAESTDKAHKKQKKNKKATDGSGKKKAKKAK 361
              DEVP  VPVS                  ES      K KK       S KK  KK  
Sbjct: 311 PGNDEVPESVPVS------------------ESNTNVVSKSKKIVANGSSSKKKGLKKCS 370

Query: 362 KAKKTTNGISDLVSENTPMNKDNENIVVANGENSNNEQISDGNMITFDETVISNLQMQFE 421
           K KK      D V +   M+      VV  G              +FDET+IS+L+ +FE
Sbjct: 371 KTKK------DSVKKGAVMDS-----VVDLGNKDE----------SFDETMISDLRQEFE 430

Query: 422 RVAAEADFGDSIVSPV--ISTNGSVKKRKRAKSVDGLQKHDVVLPSEVDAEGNTAAKSEE 481
           ++A+E     S V+ V  ++   SV K+ + +  +   +  V   +   AE + A  S E
Sbjct: 431 KIASEMSPSKSEVASVCDVAEPVSVSKKTKKRKRENKGEEQVSTVNRDAAETSLAGPSSE 490

Query: 482 KSVKKVRFSMKNNLVWKPHNPLPPESLRLPPSVTPRGSALKKGIPPGPILEFTATTKRTK 541
           KS K+VRF+MKNNLVWKPH PLPP+ LR PPS TPRGSALK+GIP GP+ E    +++TK
Sbjct: 491 KSSKRVRFAMKNNLVWKPHCPLPPQDLRCPPSATPRGSALKQGIPAGPVREL--ASRKTK 528

Query: 542 RRAVAMRAKKGVRSLPVKRLKK 561
           ++ V   A++GV+S  +K LKK
Sbjct: 551 KK-VKPAARRGVKS--IKNLKK 528

The following BLAST results are available for this feature:

BLAST of Lsi11G008080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91YK2	6.5e-25	35.09	Ribosomal RNA processing protein 1 homolog B OS=Mus musculus OX=10090 GN=Rrp1b P...	[more]
Q14684	2.3e-22	35.10	Ribosomal RNA processing protein 1 homolog B OS=Homo sapiens OX=9606 GN=RRP1B PE...	[more]
P56183	1.3e-20	30.90	Ribosomal RNA processing protein 1 homolog A OS=Mus musculus OX=10090 GN=Rrp1 PE...	[more]
P56182	1.7e-20	31.08	Ribosomal RNA processing protein 1 homolog A OS=Homo sapiens OX=9606 GN=RRP1 PE=...	[more]
Q9Y7M6	3.7e-20	36.90	Ribosomal RNA-processing protein 1 homolog OS=Schizosaccharomyces pombe (strain ...	[more]

BLAST of Lsi11G008080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U008	6.1e-292	93.29	Ribosomal RNA processing protein 1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BR64	6.1e-292	93.29	ribosomal RNA processing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC1034922...	[more]
A0A0A0LGX3	5.0e-286	91.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062650 PE=4 SV=1	[more]
A0A6J1ENE5	7.0e-280	86.07	ribosomal RNA processing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1D805	2.2e-278	88.73	ribosomal RNA processing protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Lsi11G008080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875379.1	2.3e-293	93.29	ribosomal RNA processing protein 1 homolog [Benincasa hispida]	[more]
XP_008450828.1	1.3e-291	93.29	PREDICTED: ribosomal RNA processing protein 1 homolog [Cucumis melo] >KAA0047556...	[more]
XP_004150388.1	1.0e-285	91.87	ribosomal RNA processing protein 1 homolog [Cucumis sativus]	[more]
XP_022929687.1	1.4e-279	86.07	ribosomal RNA processing protein 1 homolog [Cucurbita moschata] >XP_022929688.1 ...	[more]
XP_023546269.1	1.2e-278	87.12	ribosomal RNA processing protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_0235...	[more]

BLAST of Lsi11G008080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20600.1	7.0e-131	48.93	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA processing; LOCATED ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010301	Nucleolar, Nop52	PFAM	PF05997	Nop52	coord: 13..214 e-value: 1.3E-55 score: 188.6
IPR010301	Nucleolar, Nop52	PANTHER	PTHR13026	NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52	coord: 13..558
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 339..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 331..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 499..528
None	No IPR available	PANTHER	PTHR13026:SF0	RIBOSOMAL RNA-PROCESSING 1	coord: 13..558

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G008080.1	Lsi11G008080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0030688	preribosome, small subunit precursor