Homology
BLAST of Lsi11G007780 vs. ExPASy Swiss-Prot
Match:
O64705 (Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E23 PE=3 SV=2)
HSP 1 Score: 654.4 bits (1687), Expect = 1.2e-186
Identity = 334/611 (54.66%), Postives = 430/611 (70.38%), Query Frame = 0
Query: 4 IKASPHLISRYLNFDKTNSK--PNPNRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSIH 63
IK S Y F K + R L + L++C+S+ QL+QI QML +S+
Sbjct: 7 IKPEKLAFSIYRQFPKFKPRQFEEARRGDLERDFLFLLKKCISVNQLRQIQAQMLLHSVE 66
Query: 64 KPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFL 123
KP+ + K V+L DF Y+S FS +P YSFN MIRGL+ TWN AL Y RMKF
Sbjct: 67 KPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFS 126
Query: 124 GLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVSHA 183
GLKP+K TY F+FIAC+ L + GR H S+ K GL+ D H++HSLI MYA+CGQV +A
Sbjct: 127 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYA 186
Query: 184 RKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGEL 243
RK+FDEI E+D VSWNSMISGYS+ +A +A+ LFR+M E GF+P+E TLVS+LGAC L
Sbjct: 187 RKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHL 246
Query: 244 GDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMI 303
GDL G +EE + K+ L++F+GS LI MYGKCGDL SARR+F+ M KKD+V W AMI
Sbjct: 247 GDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMI 306
Query: 304 T--GQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGLR 363
T QNG S EA KLF +M + +PD TL +LSAC S+GAL+LGKQ+E +ASE L+
Sbjct: 307 TVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQ 366
Query: 364 DDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKSM 423
+IYVAT LVDMY KCG ++ A RVF MP KNE +WNAMI+A A G A+EAL LF M
Sbjct: 367 HNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM 426
Query: 424 INEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSRA 483
+ P+DITF+GVLSACVHAGLV +G R FH MSS FGLVPKIEHY+ ++DLLSRA
Sbjct: 427 -----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRA 486
Query: 484 GHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLEL-EPSNSGNYVIS 543
G L+EAW+F+ + P KPDE++L A+LGAC KRK+V I E+ M++L+E+ E N+GNYVIS
Sbjct: 487 GMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVIS 546
Query: 544 SRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAG-DVLHEEWIQIHQI 603
S + A+++ WD+SA+MR LM+ +GV KTPGCSWI+I +L EF AG D L +
Sbjct: 547 SNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSL 606
Query: 604 LDLLIDDLRRE 609
DLL+++++RE
Sbjct: 607 FDLLVEEMKRE 612
BLAST of Lsi11G007780 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 428.3 bits (1100), Expect = 1.4e-118
Identity = 229/606 (37.79%), Postives = 359/606 (59.24%), Query Frame = 0
Query: 36 IAFLQQCVSIKQLKQIHTQMLTNSIHKPSSFLYKIVD-------LKDFAYASDFFSNILD 95
++ L C +++ L+ IH QM+ +H + L K+++ + YA F I +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 96 PTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRV 155
P +N M RG + + + S AL+ Y M LGL PN T+PF+ +C+ A ++G+
Sbjct: 97 PNLLIWNTMFRGHALSSDPVS-ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 156
Query: 156 GHCSVIKRGLDEDGHVSHSLITM-------------------------------YARCGQ 215
H V+K G D D +V SLI+M YA G
Sbjct: 157 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 216
Query: 216 VSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGA 275
+ +A+K+FDEIP KD+VSWN+MISGY++ + EA+ LF++MM+ +P+E T+V+V+ A
Sbjct: 217 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 276
Query: 276 CGELGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTW 335
C + G +ELG V ++ ++ N I +ALI +Y KCG+L +A +F+ + KD ++W
Sbjct: 277 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 336
Query: 336 NAMITGQNGMS--EEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASE 395
N +I G M+ +EA+ LFQ+M S P+ +T++ IL ACA +GA+D+G+ + +Y +
Sbjct: 337 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 396
Query: 396 R--GLRDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEAL 455
R G+ + + T+L+DMYAKCG ++ A +VF + K+ SWNAMI A HG+A +
Sbjct: 397 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 456
Query: 456 ALFKSMINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMV 515
LF M G P+DITFVG+LSAC H+G++D GR +F M+ + + PK+EHY CM+
Sbjct: 457 DLFSRMRKIG--IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 516
Query: 516 DLLSRAGHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLELEPSNSG 575
DLL +G +EA + +N M +PD VI +LL AC+ NV++ E + L+++EP N G
Sbjct: 517 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 576
Query: 576 NYVISSRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHEEWIQ 600
+YV+ S +YA+ RW++ A+ R L+ KG+ K PGCS I+I+S +HEF GD H +
Sbjct: 577 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 636
BLAST of Lsi11G007780 vs. ExPASy Swiss-Prot
Match:
Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 419.9 bits (1078), Expect = 5.1e-116
Identity = 241/641 (37.60%), Postives = 364/641 (56.79%), Query Frame = 0
Query: 3 RIKASPHLISRYLNFDKTNSKPNPNRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSI-- 62
R ++ PH + +N++ T+S L+ L++ L++C + LKQI QM+ N +
Sbjct: 30 RTRSLPHHRDKPINWNSTHS------FVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLIL 89
Query: 63 -HKPSSFLYKIVDLKD---FAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYS 122
SS L L + Y+ I +P +S+NV IRG S + N L Y
Sbjct: 90 DPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFL-LYK 149
Query: 123 RMKFLGL---KPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYA 182
+M G +P+ TYP LF C++L G + V+K L+ HV ++ I M+A
Sbjct: 150 QMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFA 209
Query: 183 RCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVS 242
CG + +ARKVFDE P +DLVSWN +I+GY K+ A +A+ +++ M G +P+++T++
Sbjct: 210 SCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIG 269
Query: 243 VLGACGELGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKK-- 302
++ +C LGDL G E+V EN + + + +AL+ M+ KCGD+ ARRIFD+++K
Sbjct: 270 LVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT 329
Query: 303 -----------------------------KDKVTWNAMITG--QNGMSEEAIKLFQDMRM 362
KD V WNAMI G Q ++A+ LFQ+M+
Sbjct: 330 IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQT 389
Query: 363 SSTAPDQITLIGILSACASIGALDLGKQVEIYASERGLRDDIYVATALVDMYAKCGSLDN 422
S+T PD+IT+I LSAC+ +GALD+G + Y + L ++ + T+LVDMYAKCG++
Sbjct: 390 SNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 449
Query: 423 AFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKSMINEGGAASPNDITFVGVLSAC 482
A VF+G+ +N +++ A+I LA HG A A++ F MI+ G +P++ITF+G+LSAC
Sbjct: 450 ALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAG--IAPDEITFIGLLSAC 509
Query: 483 VHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSRAGHLEEAWDFVNKMPEKPDEVI 542
H G++ GR F M S F L P+++HYS MVDLL RAG LEEA + MP + D +
Sbjct: 510 CHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAV 569
Query: 543 LGALLGACQKRKNVDISERVMKLLLELEPSNSGNYVISSRLYANLRRWDDSARMRLLMKQ 602
GALL C+ NV++ E+ K LLEL+PS+SG YV+ +Y W+D+ R R +M +
Sbjct: 570 WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNE 629
BLAST of Lsi11G007780 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 418.3 bits (1074), Expect = 1.5e-115
Identity = 226/640 (35.31%), Postives = 362/640 (56.56%), Query Frame = 0
Query: 6 ASPHLISRYLNFDKTNSKPNPNRQALYEKLIAFLQQCVSIKQLKQIHTQML-TNSIHKP- 65
A P + R+ NF N N ++ + I+ +++CVS++QLKQ H M+ T + P
Sbjct: 7 AQPLSLPRHPNFSNPNQPTTNNERSRH---ISLIERCVSLRQLKQTHGHMIRTGTFSDPY 66
Query: 66 -SSFLYKIVDLKDFA---YASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMK 125
+S L+ + L FA YA F I P +++N +IR ++ + F +
Sbjct: 67 SASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVS 126
Query: 126 FLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVS 185
PNK T+PFL A + + ++ G+ H +K + D V++SLI Y CG +
Sbjct: 127 ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLD 186
Query: 186 HARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACG 245
A KVF I EKD+VSWNSMI+G+ + +A+ LF++M + + +T+V VL AC
Sbjct: 187 SACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACA 246
Query: 246 ELGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNA 305
++ +LE G V ++ EN++ +N + +A++ MY KCG + A+R+FD+M++KD VTW
Sbjct: 247 KIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTT 306
Query: 306 MITG---------------------------------QNGMSEEAIKLFQDMRMSSTAP- 365
M+ G QNG EA+ +F ++++
Sbjct: 307 MLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKL 366
Query: 366 DQITLIGILSACASIGALDLGKQVEIYASERGLRDDIYVATALVDMYAKCGSLDNAFRVF 425
+QITL+ LSACA +GAL+LG+ + Y + G+R + +V +AL+ MY+KCG L+ + VF
Sbjct: 367 NQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVF 426
Query: 426 YGMPRKNEVSWNAMISALAFHGQAQEALALFKSMINEGGAASPNDITFVGVLSACVHAGL 485
+ +++ W+AMI LA HG EA+ +F M + PN +TF V AC H GL
Sbjct: 427 NSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM--QEANVKPNGVTFTNVFCACSHTGL 486
Query: 486 VDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSRAGHLEEAWDFVNKMPEKPDEVILGALL 545
VDE LFH M S++G+VP+ +HY+C+VD+L R+G+LE+A F+ MP P + GALL
Sbjct: 487 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 546
Query: 546 GACQKRKNVDISERVMKLLLELEPSNSGNYVISSRLYANLRRWDDSARMRLLMKQKGVSK 602
GAC+ N++++E LLELEP N G +V+ S +YA L +W++ + +R M+ G+ K
Sbjct: 547 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKK 606
BLAST of Lsi11G007780 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 406.8 bits (1044), Expect = 4.4e-112
Identity = 226/622 (36.33%), Postives = 350/622 (56.27%), Query Frame = 0
Query: 27 NRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSIHKPSSFLYKIVDLKDFAYASDFFSNI 86
N + +LI +C S++ +Q+ +M +I+ +S + + L A F ++
Sbjct: 53 NEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSM 112
Query: 87 LDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDG 146
+ + ++N M+ G + ++ AL +++ M G N+ ++ + ACS L + G
Sbjct: 113 PERDQCTWNSMVSGFA-QHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG 172
Query: 147 RVGHCSVIKRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKM 206
H + K D ++ +L+ MY++CG V+ A++VFDE+ ++++VSWNS+I+ + +
Sbjct: 173 VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 232
Query: 207 RHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFVVENKMVLNSFI- 266
A EA+ +F+ M+E+ +P+E+TL SV+ AC L +++G V VV+N + N I
Sbjct: 233 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 292
Query: 267 GSALIHMYGKCGDLVSARRIFDS-------------------------------MKKKDK 326
+A + MY KC + AR IFDS M +++
Sbjct: 293 SNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 352
Query: 327 VTWNAMITG--QNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIY 386
V+WNA+I G QNG +EEA+ LF ++ S P + IL ACA + L LG Q ++
Sbjct: 353 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 412
Query: 387 ASERGLR------DDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFH 446
+ G + DDI+V +L+DMY KCG ++ + VF M ++ VSWNAMI A +
Sbjct: 413 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 472
Query: 447 GQAQEALALFKSMINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKI 506
G EAL LF+ M+ G P+ IT +GVLSAC HAG V+EGR F M+ FG+ P
Sbjct: 473 GYGNEALELFREMLESG--EKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 532
Query: 507 EHYSCMVDLLSRAGHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLE 566
+HY+CMVDLL RAG LEEA + +MP +PD VI G+LL AC+ +N+ + + V + LLE
Sbjct: 533 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE 592
Query: 567 LEPSNSGNYVISSRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 609
+EPSNSG YV+ S +YA L +W+D +R M+++GV+K PGCSWI I H F D
Sbjct: 593 VEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDK 652
BLAST of Lsi11G007780 vs. ExPASy TrEMBL
Match:
A0A6J1EUW3 (pentatricopeptide repeat-containing protein At2g34400 OS=Cucurbita moschata OX=3662 GN=LOC111436152 PE=4 SV=1)
HSP 1 Score: 1140.2 bits (2948), Expect = 0.0e+00
Identity = 563/610 (92.30%), Postives = 591/610 (96.89%), Query Frame = 0
Query: 1 MLRIKASPHLISRYLNFDKTNSKPNPNRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSI 60
MLRIK+SPHLISRYLNFDKT+SKPNPNRQA EKL+ FLQQCVSIKQLKQIH QMLTNSI
Sbjct: 1 MLRIKSSPHLISRYLNFDKTHSKPNPNRQAFSEKLVTFLQQCVSIKQLKQIHNQMLTNSI 60
Query: 61 HKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
HKP+SFLYK+VDLKDFAYASDFFS IL+PTEY+FNVMIRGLSTTWNKSSLALEFYSRMKF
Sbjct: 61 HKPNSFLYKVVDLKDFAYASDFFSKILEPTEYAFNVMIRGLSTTWNKSSLALEFYSRMKF 120
Query: 121 LGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVSH 180
LGLKPNKLTYPFLFIACSNLLAVE+GRVGH SVIKRGLDEDGHVSHSLITMYARCG+V
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHSSVIKRGLDEDGHVSHSLITMYARCGEVGD 180
Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLFR+MM+AGF PNEMTLVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAVEAVGLFRDMMQAGFDPNEMTLVSVLGACGE 240
Query: 241 LGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
LGDL+LGTWVEEFVV+N+MVLNS++GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVDNRMVLNSYMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
Query: 301 ITG--QNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGL 360
ITG QNGMSEEAIKLFQDMR+SSTAPDQITL+G LSACASIGALDLGKQVEIYASERGL
Sbjct: 301 ITGYAQNGMSEEAIKLFQDMRISSTAPDQITLVGTLSACASIGALDLGKQVEIYASERGL 360
Query: 361 RDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKS 420
RD+IYV+TALVDMYAKCGSLDNAFRVF MP+KNEVSWNAMISALAFHGQAQ+ALALF+S
Sbjct: 361 RDNIYVSTALVDMYAKCGSLDNAFRVFDVMPQKNEVSWNAMISALAFHGQAQKALALFES 420
Query: 421 MINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSR 480
MI EGGAASPNDITFVGVLSACVHAGLVDEGRR FH+MSSSFGLVPKIEHYSCMVDLLSR
Sbjct: 421 MIKEGGAASPNDITFVGVLSACVHAGLVDEGRRFFHMMSSSFGLVPKIEHYSCMVDLLSR 480
Query: 481 AGHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLELEPSNSGNYVIS 540
AGHLEEAWDFV KMPEKPDEVILGALLGACQKRKNV+ISERVMKLLLELEPSNSGNYVIS
Sbjct: 481 AGHLEEAWDFVKKMPEKPDEVILGALLGACQKRKNVEISERVMKLLLELEPSNSGNYVIS 540
Query: 541 SRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHEEWIQIHQIL 600
SRLYANLRRWDDSARMR+LMKQKGVSKTPGCSWIDINSQLHEFHAGDVLH+EWI+I QIL
Sbjct: 541 SRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIQQIL 600
Query: 601 DLLIDDLRRE 609
DLLIDDLRRE
Sbjct: 601 DLLIDDLRRE 610
BLAST of Lsi11G007780 vs. ExPASy TrEMBL
Match:
A0A6J1KBU4 (pentatricopeptide repeat-containing protein At2g34400 OS=Cucurbita maxima OX=3661 GN=LOC111492454 PE=4 SV=1)
HSP 1 Score: 1137.9 bits (2942), Expect = 0.0e+00
Identity = 559/610 (91.64%), Postives = 592/610 (97.05%), Query Frame = 0
Query: 1 MLRIKASPHLISRYLNFDKTNSKPNPNRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSI 60
MLRIK+SPHLISRYLNFDKT+SKPNPNRQAL EKL+ FLQQC+SIKQ+KQIH QMLTNSI
Sbjct: 1 MLRIKSSPHLISRYLNFDKTHSKPNPNRQALSEKLVTFLQQCLSIKQMKQIHNQMLTNSI 60
Query: 61 HKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
HKP+SFLYK+VDLKDFAYASDFFS IL+PTEY+FNVMIRGLSTTWNKSSLALEFYSRMKF
Sbjct: 61 HKPNSFLYKVVDLKDFAYASDFFSKILEPTEYAFNVMIRGLSTTWNKSSLALEFYSRMKF 120
Query: 121 LGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVSH 180
LGLKPNKLTYPFLFIACSNLLAVE+GRVGH SVIKRGLDEDGHVSHSLITMYARCG+V
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHSSVIKRGLDEDGHVSHSLITMYARCGEVGD 180
Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLF +MM+AGF+PNEMTLVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAVEAVGLFSDMMQAGFEPNEMTLVSVLGACGE 240
Query: 241 LGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
LGDL+LGTWVEEFV++N+MVLNS++GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVMDNRMVLNSYMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
Query: 301 ITG--QNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGL 360
ITG QNGMSEEAIKLFQDMR+SSTAPDQITL+G LSACASIGALDLGKQVEIYASERGL
Sbjct: 301 ITGYAQNGMSEEAIKLFQDMRISSTAPDQITLVGTLSACASIGALDLGKQVEIYASERGL 360
Query: 361 RDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKS 420
RD+IYV+TALVDMY+KCGSLDNAFRVF MPRKNEVSWNAMISALAFHGQAQ+A+ALF S
Sbjct: 361 RDNIYVSTALVDMYSKCGSLDNAFRVFDVMPRKNEVSWNAMISALAFHGQAQKAMALFNS 420
Query: 421 MINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSR 480
M+NEGGAASPNDITFVGVLSACVHAGLVDEGRR FH+MSSSFGLVPKIEHYSCMVDLLSR
Sbjct: 421 MLNEGGAASPNDITFVGVLSACVHAGLVDEGRRFFHMMSSSFGLVPKIEHYSCMVDLLSR 480
Query: 481 AGHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLELEPSNSGNYVIS 540
AGHLEEAWDFV KMPEKPDEVILGALLGACQKRKNV+ISERVMKLLLELEPSNSGNYVIS
Sbjct: 481 AGHLEEAWDFVKKMPEKPDEVILGALLGACQKRKNVEISERVMKLLLELEPSNSGNYVIS 540
Query: 541 SRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHEEWIQIHQIL 600
SRLYANLRRWDDSARMR+LMKQKGVSKTPGCSWIDINSQLHEFHAGDVLH+EWI+I QIL
Sbjct: 541 SRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIQQIL 600
Query: 601 DLLIDDLRRE 609
DLLIDDLRRE
Sbjct: 601 DLLIDDLRRE 610
BLAST of Lsi11G007780 vs. ExPASy TrEMBL
Match:
A0A0A0LMG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060420 PE=4 SV=1)
HSP 1 Score: 1132.9 bits (2929), Expect = 0.0e+00
Identity = 558/610 (91.48%), Postives = 582/610 (95.41%), Query Frame = 0
Query: 1 MLRIKASPHLISRYLNFDKTNSKPNPNRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSI 60
MLR KASPHLISRYLN K +SKPNPNRQAL +K + LQQC+SIKQLKQIH Q+LTNSI
Sbjct: 1 MLRTKASPHLISRYLNLQKPHSKPNPNRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSI 60
Query: 61 HKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
HKP+SFLYKI DLKDFAYAS FFSNILDPTEYSFNVMIRGLST WNKSSLALEFYSRMKF
Sbjct: 61 HKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKF 120
Query: 121 LGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVSH 180
LGLKPN LTYPFLFIACSNLLAVE+GR+GHCSVI+RGLDEDGHVSHSLITMYARCG++
Sbjct: 121 LGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGD 180
Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
ARKVFDEI +KDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEM+LVSVLGACGE
Sbjct: 181 ARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGE 240
Query: 241 LGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
LGDL+LGTWVEEFVVENKM LN F+GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
Query: 301 ITG--QNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGL 360
ITG QNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERG
Sbjct: 301 ITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGF 360
Query: 361 RDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKS 420
+DD+YV TALVDMYAKCGSLDNAFRVFYGMP KNEVSWNAMISALAFHGQAQEALALFKS
Sbjct: 361 QDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKS 420
Query: 421 MINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSR 480
M+NEGG SPNDITFVGVLSACVHAGLVDEGRRLFH+MSSSFGLVPKIEHYSCMVDL SR
Sbjct: 421 MMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSR 480
Query: 481 AGHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLELEPSNSGNYVIS 540
AGHLEEAWDFV MPEKPDEVILGALLGACQKRKN+DISERVMKLLLELEPSNSGNYVIS
Sbjct: 481 AGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVIS 540
Query: 541 SRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHEEWIQIHQIL 600
S+LYANLRRWDDSARMR+LMKQKGVSKTPGCSWIDINSQLHEFHAGDVLH+EWI+IHQIL
Sbjct: 541 SKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQIL 600
Query: 601 DLLIDDLRRE 609
DLLIDDLRRE
Sbjct: 601 DLLIDDLRRE 610
BLAST of Lsi11G007780 vs. ExPASy TrEMBL
Match:
A0A6J1DIG6 (pentatricopeptide repeat-containing protein At2g34400 OS=Momordica charantia OX=3673 GN=LOC111020815 PE=4 SV=1)
HSP 1 Score: 1113.6 bits (2879), Expect = 0.0e+00
Identity = 555/612 (90.69%), Postives = 585/612 (95.59%), Query Frame = 0
Query: 1 MLRIKASPHLISRYLNFDKTNSKPNPNRQALYEKLIAF-LQQCVSIKQLKQIHTQMLTNS 60
MLRIKASPHLISRYLN +KTN PNPNR+AL EKL+AF LQQC+S++QLKQIHTQM+TNS
Sbjct: 1 MLRIKASPHLISRYLNLEKTN--PNPNRRALSEKLLAFLLQQCLSLRQLKQIHTQMITNS 60
Query: 61 IHKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMK 120
IHKP+SFL+KI DLKDFAYASDFFS IL+PTEY+FNVMIRGLSTTWNKSSLALE Y RMK
Sbjct: 61 IHKPNSFLFKIADLKDFAYASDFFSRILEPTEYAFNVMIRGLSTTWNKSSLALELYFRMK 120
Query: 121 FLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVS 180
FLGLKPNKLTYPFLFIACSNLLAVE GRVGH SV+KRG DEDGHVSHSLITMYARCG++
Sbjct: 121 FLGLKPNKLTYPFLFIACSNLLAVEYGRVGHSSVVKRGFDEDGHVSHSLITMYARCGELG 180
Query: 181 HARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACG 240
ARKVFDEIPE+DLVSWNSMISGYSKMR+A EAVGLFREMM AGF+PNEMTLVSVLGACG
Sbjct: 181 DARKVFDEIPERDLVSWNSMISGYSKMRYAAEAVGLFREMMGAGFEPNEMTLVSVLGACG 240
Query: 241 ELGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNA 300
ELGDL+LGTWVEEFVVENKMVLNSF+GSALIHMYGKCGDLVSARRIF+SMKKKDKVTWNA
Sbjct: 241 ELGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFESMKKKDKVTWNA 300
Query: 301 MITG--QNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERG 360
MITG QNG+SEEAIKLFQDMRMSST PDQITLIG+LSACASIGALDLGKQ EIYASERG
Sbjct: 301 MITGYAQNGLSEEAIKLFQDMRMSSTTPDQITLIGMLSACASIGALDLGKQAEIYASERG 360
Query: 361 LRDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFK 420
LRDDIYVATALVDMYAKCGSLDNAFRVF GMPRKNEVSWNAMISALAFHGQAQEALALFK
Sbjct: 361 LRDDIYVATALVDMYAKCGSLDNAFRVFNGMPRKNEVSWNAMISALAFHGQAQEALALFK 420
Query: 421 SMINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLS 480
SMI EGG+ASPNDITFVGVLSACVHAGLVDEGRRLFH+M SSF LVPKIEHYSCMVDLLS
Sbjct: 421 SMIKEGGSASPNDITFVGVLSACVHAGLVDEGRRLFHMMCSSFRLVPKIEHYSCMVDLLS 480
Query: 481 RAGHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLELEPSNSGNYVI 540
RAGHLEEAWDF+ KMPEKPDEVILGALLGACQKRKN+DISERVMKLLLELEPSNSGNYVI
Sbjct: 481 RAGHLEEAWDFIEKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVI 540
Query: 541 SSRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHA-GDVLHEEWIQIHQ 600
SSRLYANLRRWDDSARMR+LMKQKGVSKTPGCSWIDI+SQLHEFHA GDVLH EWI+IHQ
Sbjct: 541 SSRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDIDSQLHEFHAGGDVLHHEWIEIHQ 600
Query: 601 ILDLLIDDLRRE 609
IL+LLIDDLRRE
Sbjct: 601 ILNLLIDDLRRE 610
BLAST of Lsi11G007780 vs. ExPASy TrEMBL
Match:
A0A1S3BRJ2 (pentatricopeptide repeat-containing protein At2g34400 OS=Cucumis melo OX=3656 GN=LOC103492726 PE=4 SV=1)
HSP 1 Score: 1113.2 bits (2878), Expect = 0.0e+00
Identity = 550/610 (90.16%), Postives = 578/610 (94.75%), Query Frame = 0
Query: 1 MLRIKASPHLISRYLNFDKTNSKPNPNRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSI 60
MLRIKASPHLISRY N K +SKPNPN QAL EKL + LQQC+SI+QLKQIHTQ+LTNSI
Sbjct: 1 MLRIKASPHLISRYPNLQKPHSKPNPNPQALSEKLNSLLQQCLSIRQLKQIHTQLLTNSI 60
Query: 61 HKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
+KP+SFLYKIVDLKDFAYAS FFSNIL+PTEYSFNVMIRGLST WNK SLALEFYSRMKF
Sbjct: 61 YKPNSFLYKIVDLKDFAYASVFFSNILEPTEYSFNVMIRGLSTAWNKPSLALEFYSRMKF 120
Query: 121 LGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVSH 180
LGLKPNK TYPFLFIACSNLLAV++GR+GHCS IKRGLDEDGHVSHSLITMYARCG++
Sbjct: 121 LGLKPNKFTYPFLFIACSNLLAVDNGRMGHCSGIKRGLDEDGHVSHSLITMYARCGKMGD 180
Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
ARKVFDEI +KDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEM+LVSVLGACGE
Sbjct: 181 ARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGE 240
Query: 241 LGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
LGDL+LGTWVEEFVVENKM LNSF+GSALIHMYGKCGDLVSARRIFDS KKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVENKMPLNSFMGSALIHMYGKCGDLVSARRIFDSTKKKDKVTWNAM 300
Query: 301 ITG--QNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGL 360
ITG QNGMSEEAIKLFQDMR+SSTAPDQITLIGILSACASIGALDLGKQ+EIYASERG
Sbjct: 301 ITGYAQNGMSEEAIKLFQDMRVSSTAPDQITLIGILSACASIGALDLGKQLEIYASERGY 360
Query: 361 RDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKS 420
RDDIYV TALVDMYAKCGSLDNAFRVFYGMP+KNEVSWNAMISALAFHGQAQEALALFKS
Sbjct: 361 RDDIYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKS 420
Query: 421 MINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSR 480
M+NEGG SPNDITFVGVLSACVHAGLVDEGRRLFH+MSSSFGLVPKIEHYSCMVDL SR
Sbjct: 421 MMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSR 480
Query: 481 AGHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLELEPSNSGNYVIS 540
AGHLEEAWDF+ MPEKPDEVILGALLGACQKRKN+DISERVM LLLELEPSNS NYVIS
Sbjct: 481 AGHLEEAWDFIMAMPEKPDEVILGALLGACQKRKNIDISERVMNLLLELEPSNSANYVIS 540
Query: 541 SRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHEEWIQIHQIL 600
S+LYA L RWDDSA MR+LMKQKGVSKTPGCSWIDINSQLHEFHAGDVLH+EWI+IHQIL
Sbjct: 541 SKLYAKLGRWDDSAMMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQIL 600
Query: 601 DLLIDDLRRE 609
DLLIDDLRRE
Sbjct: 601 DLLIDDLRRE 610
BLAST of Lsi11G007780 vs. NCBI nr
Match:
XP_038889591.1 (pentatricopeptide repeat-containing protein At2g34400 [Benincasa hispida])
HSP 1 Score: 1163.3 bits (3008), Expect = 0.0e+00
Identity = 577/610 (94.59%), Postives = 595/610 (97.54%), Query Frame = 0
Query: 1 MLRIKASPHLISRYLNFDKTNSKPNPNRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSI 60
MLRIKASPHLISRY NF+KTNSKP+PNRQAL EKL +FLQQCVSIKQLKQIHTQMLTNSI
Sbjct: 1 MLRIKASPHLISRYFNFNKTNSKPSPNRQALSEKLNSFLQQCVSIKQLKQIHTQMLTNSI 60
Query: 61 HKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
HKP+SFLYKIVDLKDFAY+ DFFS I++PTEYSFNVMIRGL+ TWNKSSLALE Y RMKF
Sbjct: 61 HKPNSFLYKIVDLKDFAYSLDFFSKIVEPTEYSFNVMIRGLAKTWNKSSLALELYYRMKF 120
Query: 121 LGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVSH 180
LGLKPNKLTYPFLFIACSNLLAVE+GRVGHCSVIKRGLDEDGHVSHSLITMYARCGQV
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVGD 180
Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
ARKVFDEIPEKDLVSW+SMISGYSKMRHAGEAVGLFREMMEAGFQPNEM LVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWSSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMALVSVLGACGE 240
Query: 241 LGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
LGDL+LGTWVEEFVVENKMVLNSF+GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVENKMVLNSFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
Query: 301 ITG--QNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGL 360
ITG QNGMS+EAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGL
Sbjct: 301 ITGYAQNGMSDEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGL 360
Query: 361 RDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKS 420
RDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKS
Sbjct: 361 RDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKS 420
Query: 421 MINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSR 480
MINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFH+MSSSFGLVPKIEHYSCMVDLLSR
Sbjct: 421 MINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLLSR 480
Query: 481 AGHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLELEPSNSGNYVIS 540
AGHLEEAWDFV KMPEKPDEVILGALLGACQKRKN+DISERVMKLLLELEPSNSGNYVIS
Sbjct: 481 AGHLEEAWDFVKKMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVIS 540
Query: 541 SRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHEEWIQIHQIL 600
SRLYANLRRWDDSARMR+LMKQKGVSKTPGCSWIDINSQLHEFHAGDVLH+EWI+I QIL
Sbjct: 541 SRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIRQIL 600
Query: 601 DLLIDDLRRE 609
DLLIDDLRRE
Sbjct: 601 DLLIDDLRRE 610
BLAST of Lsi11G007780 vs. NCBI nr
Match:
KAG7029836.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1142.1 bits (2953), Expect = 0.0e+00
Identity = 562/608 (92.43%), Postives = 590/608 (97.04%), Query Frame = 0
Query: 1 MLRIKASPHLISRYLNFDKTNSKPNPNRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSI 60
MLRIK+SPHLISRYLNFDKT+SKPNPNRQA EKL+ FLQQCVSIKQLKQIH QMLTNSI
Sbjct: 1 MLRIKSSPHLISRYLNFDKTHSKPNPNRQAFSEKLVTFLQQCVSIKQLKQIHNQMLTNSI 60
Query: 61 HKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
HKP+SFLYK+VDLKDFAYAS FFS IL+PTEY+FNVMIRGLSTTWNKSSLALEFYSRMKF
Sbjct: 61 HKPNSFLYKVVDLKDFAYASAFFSKILEPTEYAFNVMIRGLSTTWNKSSLALEFYSRMKF 120
Query: 121 LGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVSH 180
LGLKPNKLTYPFLFIACSNLLAVE+GRVGH SVIKRGLDEDGHVSHSLITMYARCG+V
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHSSVIKRGLDEDGHVSHSLITMYARCGEVGD 180
Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLFR+MM+AGF PNEMTLVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAVEAVGLFRDMMQAGFDPNEMTLVSVLGACGE 240
Query: 241 LGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
LGDL+LGTWVEEFVV+N+MVLNS++GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVDNRMVLNSYMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
Query: 301 ITGQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGLRD 360
ITGQNGMSEEAIKLFQDMR+SSTAPDQITL+G LSACASIGALDLGKQVEIYASERGLRD
Sbjct: 301 ITGQNGMSEEAIKLFQDMRISSTAPDQITLVGTLSACASIGALDLGKQVEIYASERGLRD 360
Query: 361 DIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKSMI 420
+IYV+TALVDMYAKCGSLDNAFRVF MP+KNEVSWNAMISALAFHGQAQ+ALALF+SMI
Sbjct: 361 NIYVSTALVDMYAKCGSLDNAFRVFDVMPQKNEVSWNAMISALAFHGQAQKALALFESMI 420
Query: 421 NEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSRAG 480
EGGAASPNDITFVGVLSACVHAGLVDEGRR FH+MSSSFGLVPKIEHYSCMVDLLSRAG
Sbjct: 421 KEGGAASPNDITFVGVLSACVHAGLVDEGRRFFHMMSSSFGLVPKIEHYSCMVDLLSRAG 480
Query: 481 HLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLELEPSNSGNYVISSR 540
HLEEAWDFV KMPEKPDEVILGALLGACQKRKNV+ISERVMKLLLELEPSNSGNYVISSR
Sbjct: 481 HLEEAWDFVKKMPEKPDEVILGALLGACQKRKNVEISERVMKLLLELEPSNSGNYVISSR 540
Query: 541 LYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHEEWIQIHQILDL 600
LYANLRRWDDSARMR+LMKQKGVSKTPGCSWIDINSQLHEFHAGDVLH+EWI+I QILDL
Sbjct: 541 LYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIQQILDL 600
Query: 601 LIDDLRRE 609
LIDDLRRE
Sbjct: 601 LIDDLRRE 608
BLAST of Lsi11G007780 vs. NCBI nr
Match:
XP_023521362.1 (pentatricopeptide repeat-containing protein At2g34400-like [Cucurbita pepo subsp. pepo] >XP_023545668.1 pentatricopeptide repeat-containing protein At2g34400-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1141.3 bits (2951), Expect = 0.0e+00
Identity = 564/610 (92.46%), Postives = 592/610 (97.05%), Query Frame = 0
Query: 1 MLRIKASPHLISRYLNFDKTNSKPNPNRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSI 60
MLRIK+SPHLISRYLNFDKT+SKPNPNRQAL EKL+ FLQQCVSIKQLKQIH QMLTNSI
Sbjct: 1 MLRIKSSPHLISRYLNFDKTHSKPNPNRQALSEKLVTFLQQCVSIKQLKQIHNQMLTNSI 60
Query: 61 HKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
HKP+SFLYK+VDLKDFAYASDFFS IL+PTEY+FNVMIRGLSTTWNKSSLALEFYSRMKF
Sbjct: 61 HKPNSFLYKVVDLKDFAYASDFFSKILEPTEYTFNVMIRGLSTTWNKSSLALEFYSRMKF 120
Query: 121 LGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVSH 180
LGLKPNKLTYPFLFIACSNLLAVE+GRVGH SVIKRGLDEDGHVSHSLITMYARCG+V
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHSSVIKRGLDEDGHVSHSLITMYARCGEVGD 180
Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLFR+MM+AGF PNEMTLVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAVEAVGLFRDMMQAGFDPNEMTLVSVLGACGE 240
Query: 241 LGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
LGDL+LGTWVEEFVV+N+MVLNS++GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVDNRMVLNSYMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
Query: 301 ITG--QNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGL 360
ITG QNGMSEEAIKLFQDMR+SSTAPDQITL+G LSACASIGALDLGKQVEIYASERGL
Sbjct: 301 ITGYAQNGMSEEAIKLFQDMRISSTAPDQITLVGTLSACASIGALDLGKQVEIYASERGL 360
Query: 361 RDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKS 420
+D+IYV+TALVDMYAKCGSLDNAFRVF MPRKNEVSWNAMISALAFHGQAQ+ALALFKS
Sbjct: 361 QDNIYVSTALVDMYAKCGSLDNAFRVFDIMPRKNEVSWNAMISALAFHGQAQKALALFKS 420
Query: 421 MINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSR 480
MINEGG ASPNDITFVGVLSACVHAGLVDEGRR FH+MSSSFGLVPKIEHYSCMVDLLSR
Sbjct: 421 MINEGGDASPNDITFVGVLSACVHAGLVDEGRRFFHMMSSSFGLVPKIEHYSCMVDLLSR 480
Query: 481 AGHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLELEPSNSGNYVIS 540
AGHLEEAWDFV KMPEKPDEVILGALLGACQKRKNV+ISERVM+LLLELEPSNSGNYVIS
Sbjct: 481 AGHLEEAWDFVKKMPEKPDEVILGALLGACQKRKNVEISERVMELLLELEPSNSGNYVIS 540
Query: 541 SRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHEEWIQIHQIL 600
SRLYANLRRWDDSARMR+LMKQKGVSKTPGCSWIDINSQLHEFHAGDVLH+EWI+I QIL
Sbjct: 541 SRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIQQIL 600
Query: 601 DLLIDDLRRE 609
DLLIDDLRRE
Sbjct: 601 DLLIDDLRRE 610
BLAST of Lsi11G007780 vs. NCBI nr
Match:
XP_022929625.1 (pentatricopeptide repeat-containing protein At2g34400 [Cucurbita moschata])
HSP 1 Score: 1140.2 bits (2948), Expect = 0.0e+00
Identity = 563/610 (92.30%), Postives = 591/610 (96.89%), Query Frame = 0
Query: 1 MLRIKASPHLISRYLNFDKTNSKPNPNRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSI 60
MLRIK+SPHLISRYLNFDKT+SKPNPNRQA EKL+ FLQQCVSIKQLKQIH QMLTNSI
Sbjct: 1 MLRIKSSPHLISRYLNFDKTHSKPNPNRQAFSEKLVTFLQQCVSIKQLKQIHNQMLTNSI 60
Query: 61 HKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
HKP+SFLYK+VDLKDFAYASDFFS IL+PTEY+FNVMIRGLSTTWNKSSLALEFYSRMKF
Sbjct: 61 HKPNSFLYKVVDLKDFAYASDFFSKILEPTEYAFNVMIRGLSTTWNKSSLALEFYSRMKF 120
Query: 121 LGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVSH 180
LGLKPNKLTYPFLFIACSNLLAVE+GRVGH SVIKRGLDEDGHVSHSLITMYARCG+V
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHSSVIKRGLDEDGHVSHSLITMYARCGEVGD 180
Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLFR+MM+AGF PNEMTLVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAVEAVGLFRDMMQAGFDPNEMTLVSVLGACGE 240
Query: 241 LGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
LGDL+LGTWVEEFVV+N+MVLNS++GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVVDNRMVLNSYMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
Query: 301 ITG--QNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGL 360
ITG QNGMSEEAIKLFQDMR+SSTAPDQITL+G LSACASIGALDLGKQVEIYASERGL
Sbjct: 301 ITGYAQNGMSEEAIKLFQDMRISSTAPDQITLVGTLSACASIGALDLGKQVEIYASERGL 360
Query: 361 RDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKS 420
RD+IYV+TALVDMYAKCGSLDNAFRVF MP+KNEVSWNAMISALAFHGQAQ+ALALF+S
Sbjct: 361 RDNIYVSTALVDMYAKCGSLDNAFRVFDVMPQKNEVSWNAMISALAFHGQAQKALALFES 420
Query: 421 MINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSR 480
MI EGGAASPNDITFVGVLSACVHAGLVDEGRR FH+MSSSFGLVPKIEHYSCMVDLLSR
Sbjct: 421 MIKEGGAASPNDITFVGVLSACVHAGLVDEGRRFFHMMSSSFGLVPKIEHYSCMVDLLSR 480
Query: 481 AGHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLELEPSNSGNYVIS 540
AGHLEEAWDFV KMPEKPDEVILGALLGACQKRKNV+ISERVMKLLLELEPSNSGNYVIS
Sbjct: 481 AGHLEEAWDFVKKMPEKPDEVILGALLGACQKRKNVEISERVMKLLLELEPSNSGNYVIS 540
Query: 541 SRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHEEWIQIHQIL 600
SRLYANLRRWDDSARMR+LMKQKGVSKTPGCSWIDINSQLHEFHAGDVLH+EWI+I QIL
Sbjct: 541 SRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIQQIL 600
Query: 601 DLLIDDLRRE 609
DLLIDDLRRE
Sbjct: 601 DLLIDDLRRE 610
BLAST of Lsi11G007780 vs. NCBI nr
Match:
XP_022997564.1 (pentatricopeptide repeat-containing protein At2g34400 [Cucurbita maxima])
HSP 1 Score: 1137.9 bits (2942), Expect = 0.0e+00
Identity = 559/610 (91.64%), Postives = 592/610 (97.05%), Query Frame = 0
Query: 1 MLRIKASPHLISRYLNFDKTNSKPNPNRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSI 60
MLRIK+SPHLISRYLNFDKT+SKPNPNRQAL EKL+ FLQQC+SIKQ+KQIH QMLTNSI
Sbjct: 1 MLRIKSSPHLISRYLNFDKTHSKPNPNRQALSEKLVTFLQQCLSIKQMKQIHNQMLTNSI 60
Query: 61 HKPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKF 120
HKP+SFLYK+VDLKDFAYASDFFS IL+PTEY+FNVMIRGLSTTWNKSSLALEFYSRMKF
Sbjct: 61 HKPNSFLYKVVDLKDFAYASDFFSKILEPTEYAFNVMIRGLSTTWNKSSLALEFYSRMKF 120
Query: 121 LGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVSH 180
LGLKPNKLTYPFLFIACSNLLAVE+GRVGH SVIKRGLDEDGHVSHSLITMYARCG+V
Sbjct: 121 LGLKPNKLTYPFLFIACSNLLAVENGRVGHSSVIKRGLDEDGHVSHSLITMYARCGEVGD 180
Query: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGE 240
ARKVFDEIPEKDLVSWNSMISGYSKMRHA EAVGLF +MM+AGF+PNEMTLVSVLGACGE
Sbjct: 181 ARKVFDEIPEKDLVSWNSMISGYSKMRHAVEAVGLFSDMMQAGFEPNEMTLVSVLGACGE 240
Query: 241 LGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
LGDL+LGTWVEEFV++N+MVLNS++GSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM
Sbjct: 241 LGDLKLGTWVEEFVMDNRMVLNSYMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAM 300
Query: 301 ITG--QNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGL 360
ITG QNGMSEEAIKLFQDMR+SSTAPDQITL+G LSACASIGALDLGKQVEIYASERGL
Sbjct: 301 ITGYAQNGMSEEAIKLFQDMRISSTAPDQITLVGTLSACASIGALDLGKQVEIYASERGL 360
Query: 361 RDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKS 420
RD+IYV+TALVDMY+KCGSLDNAFRVF MPRKNEVSWNAMISALAFHGQAQ+A+ALF S
Sbjct: 361 RDNIYVSTALVDMYSKCGSLDNAFRVFDVMPRKNEVSWNAMISALAFHGQAQKAMALFNS 420
Query: 421 MINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSR 480
M+NEGGAASPNDITFVGVLSACVHAGLVDEGRR FH+MSSSFGLVPKIEHYSCMVDLLSR
Sbjct: 421 MLNEGGAASPNDITFVGVLSACVHAGLVDEGRRFFHMMSSSFGLVPKIEHYSCMVDLLSR 480
Query: 481 AGHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLELEPSNSGNYVIS 540
AGHLEEAWDFV KMPEKPDEVILGALLGACQKRKNV+ISERVMKLLLELEPSNSGNYVIS
Sbjct: 481 AGHLEEAWDFVKKMPEKPDEVILGALLGACQKRKNVEISERVMKLLLELEPSNSGNYVIS 540
Query: 541 SRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHEEWIQIHQIL 600
SRLYANLRRWDDSARMR+LMKQKGVSKTPGCSWIDINSQLHEFHAGDVLH+EWI+I QIL
Sbjct: 541 SRLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIQQIL 600
Query: 601 DLLIDDLRRE 609
DLLIDDLRRE
Sbjct: 601 DLLIDDLRRE 610
BLAST of Lsi11G007780 vs. TAIR 10
Match:
AT2G34400.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 654.4 bits (1687), Expect = 8.7e-188
Identity = 334/611 (54.66%), Postives = 430/611 (70.38%), Query Frame = 0
Query: 4 IKASPHLISRYLNFDKTNSK--PNPNRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSIH 63
IK S Y F K + R L + L++C+S+ QL+QI QML +S+
Sbjct: 7 IKPEKLAFSIYRQFPKFKPRQFEEARRGDLERDFLFLLKKCISVNQLRQIQAQMLLHSVE 66
Query: 64 KPSSFLYKIVDLKDFAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFL 123
KP+ + K V+L DF Y+S FS +P YSFN MIRGL+ TWN AL Y RMKF
Sbjct: 67 KPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFS 126
Query: 124 GLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVSHA 183
GLKP+K TY F+FIAC+ L + GR H S+ K GL+ D H++HSLI MYA+CGQV +A
Sbjct: 127 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYA 186
Query: 184 RKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGEL 243
RK+FDEI E+D VSWNSMISGYS+ +A +A+ LFR+M E GF+P+E TLVS+LGAC L
Sbjct: 187 RKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHL 246
Query: 244 GDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMI 303
GDL G +EE + K+ L++F+GS LI MYGKCGDL SARR+F+ M KKD+V W AMI
Sbjct: 247 GDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMI 306
Query: 304 T--GQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGLR 363
T QNG S EA KLF +M + +PD TL +LSAC S+GAL+LGKQ+E +ASE L+
Sbjct: 307 TVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQ 366
Query: 364 DDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKSM 423
+IYVAT LVDMY KCG ++ A RVF MP KNE +WNAMI+A A G A+EAL LF M
Sbjct: 367 HNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM 426
Query: 424 INEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSRA 483
+ P+DITF+GVLSACVHAGLV +G R FH MSS FGLVPKIEHY+ ++DLLSRA
Sbjct: 427 -----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRA 486
Query: 484 GHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLEL-EPSNSGNYVIS 543
G L+EAW+F+ + P KPDE++L A+LGAC KRK+V I E+ M++L+E+ E N+GNYVIS
Sbjct: 487 GMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVIS 546
Query: 544 SRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAG-DVLHEEWIQIHQI 603
S + A+++ WD+SA+MR LM+ +GV KTPGCSWI+I +L EF AG D L +
Sbjct: 547 SNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSL 606
Query: 604 LDLLIDDLRRE 609
DLL+++++RE
Sbjct: 607 FDLLVEEMKRE 612
BLAST of Lsi11G007780 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 428.3 bits (1100), Expect = 1.0e-119
Identity = 229/606 (37.79%), Postives = 359/606 (59.24%), Query Frame = 0
Query: 36 IAFLQQCVSIKQLKQIHTQMLTNSIHKPSSFLYKIVD-------LKDFAYASDFFSNILD 95
++ L C +++ L+ IH QM+ +H + L K+++ + YA F I +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 96 PTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDGRV 155
P +N M RG + + + S AL+ Y M LGL PN T+PF+ +C+ A ++G+
Sbjct: 97 PNLLIWNTMFRGHALSSDPVS-ALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 156
Query: 156 GHCSVIKRGLDEDGHVSHSLITM-------------------------------YARCGQ 215
H V+K G D D +V SLI+M YA G
Sbjct: 157 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 216
Query: 216 VSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGA 275
+ +A+K+FDEIP KD+VSWN+MISGY++ + EA+ LF++MM+ +P+E T+V+V+ A
Sbjct: 217 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 276
Query: 276 CGELGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTW 335
C + G +ELG V ++ ++ N I +ALI +Y KCG+L +A +F+ + KD ++W
Sbjct: 277 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 336
Query: 336 NAMITGQNGMS--EEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASE 395
N +I G M+ +EA+ LFQ+M S P+ +T++ IL ACA +GA+D+G+ + +Y +
Sbjct: 337 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 396
Query: 396 R--GLRDDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFHGQAQEAL 455
R G+ + + T+L+DMYAKCG ++ A +VF + K+ SWNAMI A HG+A +
Sbjct: 397 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 456
Query: 456 ALFKSMINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMV 515
LF M G P+DITFVG+LSAC H+G++D GR +F M+ + + PK+EHY CM+
Sbjct: 457 DLFSRMRKIG--IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 516
Query: 516 DLLSRAGHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLELEPSNSG 575
DLL +G +EA + +N M +PD VI +LL AC+ NV++ E + L+++EP N G
Sbjct: 517 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 576
Query: 576 NYVISSRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHEEWIQ 600
+YV+ S +YA+ RW++ A+ R L+ KG+ K PGCS I+I+S +HEF GD H +
Sbjct: 577 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 636
BLAST of Lsi11G007780 vs. TAIR 10
Match:
AT2G22410.1 (SLOW GROWTH 1 )
HSP 1 Score: 419.9 bits (1078), Expect = 3.6e-117
Identity = 241/641 (37.60%), Postives = 364/641 (56.79%), Query Frame = 0
Query: 3 RIKASPHLISRYLNFDKTNSKPNPNRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSI-- 62
R ++ PH + +N++ T+S L+ L++ L++C + LKQI QM+ N +
Sbjct: 30 RTRSLPHHRDKPINWNSTHS------FVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLIL 89
Query: 63 -HKPSSFLYKIVDLKD---FAYASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYS 122
SS L L + Y+ I +P +S+NV IRG S + N L Y
Sbjct: 90 DPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFL-LYK 149
Query: 123 RMKFLGL---KPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYA 182
+M G +P+ TYP LF C++L G + V+K L+ HV ++ I M+A
Sbjct: 150 QMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFA 209
Query: 183 RCGQVSHARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVS 242
CG + +ARKVFDE P +DLVSWN +I+GY K+ A +A+ +++ M G +P+++T++
Sbjct: 210 SCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIG 269
Query: 243 VLGACGELGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKK-- 302
++ +C LGDL G E+V EN + + + +AL+ M+ KCGD+ ARRIFD+++K
Sbjct: 270 LVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT 329
Query: 303 -----------------------------KDKVTWNAMITG--QNGMSEEAIKLFQDMRM 362
KD V WNAMI G Q ++A+ LFQ+M+
Sbjct: 330 IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQT 389
Query: 363 SSTAPDQITLIGILSACASIGALDLGKQVEIYASERGLRDDIYVATALVDMYAKCGSLDN 422
S+T PD+IT+I LSAC+ +GALD+G + Y + L ++ + T+LVDMYAKCG++
Sbjct: 390 SNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 449
Query: 423 AFRVFYGMPRKNEVSWNAMISALAFHGQAQEALALFKSMINEGGAASPNDITFVGVLSAC 482
A VF+G+ +N +++ A+I LA HG A A++ F MI+ G +P++ITF+G+LSAC
Sbjct: 450 ALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAG--IAPDEITFIGLLSAC 509
Query: 483 VHAGLVDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSRAGHLEEAWDFVNKMPEKPDEVI 542
H G++ GR F M S F L P+++HYS MVDLL RAG LEEA + MP + D +
Sbjct: 510 CHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAV 569
Query: 543 LGALLGACQKRKNVDISERVMKLLLELEPSNSGNYVISSRLYANLRRWDDSARMRLLMKQ 602
GALL C+ NV++ E+ K LLEL+PS+SG YV+ +Y W+D+ R R +M +
Sbjct: 570 WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNE 629
BLAST of Lsi11G007780 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 418.3 bits (1074), Expect = 1.0e-116
Identity = 226/640 (35.31%), Postives = 362/640 (56.56%), Query Frame = 0
Query: 6 ASPHLISRYLNFDKTNSKPNPNRQALYEKLIAFLQQCVSIKQLKQIHTQML-TNSIHKP- 65
A P + R+ NF N N ++ + I+ +++CVS++QLKQ H M+ T + P
Sbjct: 7 AQPLSLPRHPNFSNPNQPTTNNERSRH---ISLIERCVSLRQLKQTHGHMIRTGTFSDPY 66
Query: 66 -SSFLYKIVDLKDFA---YASDFFSNILDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMK 125
+S L+ + L FA YA F I P +++N +IR ++ + F +
Sbjct: 67 SASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVS 126
Query: 126 FLGLKPNKLTYPFLFIACSNLLAVEDGRVGHCSVIKRGLDEDGHVSHSLITMYARCGQVS 185
PNK T+PFL A + + ++ G+ H +K + D V++SLI Y CG +
Sbjct: 127 ESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLD 186
Query: 186 HARKVFDEIPEKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMTLVSVLGACG 245
A KVF I EKD+VSWNSMI+G+ + +A+ LF++M + + +T+V VL AC
Sbjct: 187 SACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACA 246
Query: 246 ELGDLELGTWVEEFVVENKMVLNSFIGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNA 305
++ +LE G V ++ EN++ +N + +A++ MY KCG + A+R+FD+M++KD VTW
Sbjct: 247 KIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTT 306
Query: 306 MITG---------------------------------QNGMSEEAIKLFQDMRMSSTAP- 365
M+ G QNG EA+ +F ++++
Sbjct: 307 MLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKL 366
Query: 366 DQITLIGILSACASIGALDLGKQVEIYASERGLRDDIYVATALVDMYAKCGSLDNAFRVF 425
+QITL+ LSACA +GAL+LG+ + Y + G+R + +V +AL+ MY+KCG L+ + VF
Sbjct: 367 NQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVF 426
Query: 426 YGMPRKNEVSWNAMISALAFHGQAQEALALFKSMINEGGAASPNDITFVGVLSACVHAGL 485
+ +++ W+AMI LA HG EA+ +F M + PN +TF V AC H GL
Sbjct: 427 NSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKM--QEANVKPNGVTFTNVFCACSHTGL 486
Query: 486 VDEGRRLFHLMSSSFGLVPKIEHYSCMVDLLSRAGHLEEAWDFVNKMPEKPDEVILGALL 545
VDE LFH M S++G+VP+ +HY+C+VD+L R+G+LE+A F+ MP P + GALL
Sbjct: 487 VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 546
Query: 546 GACQKRKNVDISERVMKLLLELEPSNSGNYVISSRLYANLRRWDDSARMRLLMKQKGVSK 602
GAC+ N++++E LLELEP N G +V+ S +YA L +W++ + +R M+ G+ K
Sbjct: 547 GACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKK 606
BLAST of Lsi11G007780 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 406.8 bits (1044), Expect = 3.2e-113
Identity = 226/622 (36.33%), Postives = 350/622 (56.27%), Query Frame = 0
Query: 27 NRQALYEKLIAFLQQCVSIKQLKQIHTQMLTNSIHKPSSFLYKIVDLKDFAYASDFFSNI 86
N + +LI +C S++ +Q+ +M +I+ +S + + L A F ++
Sbjct: 53 NEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSM 112
Query: 87 LDPTEYSFNVMIRGLSTTWNKSSLALEFYSRMKFLGLKPNKLTYPFLFIACSNLLAVEDG 146
+ + ++N M+ G + ++ AL +++ M G N+ ++ + ACS L + G
Sbjct: 113 PERDQCTWNSMVSGFA-QHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG 172
Query: 147 RVGHCSVIKRGLDEDGHVSHSLITMYARCGQVSHARKVFDEIPEKDLVSWNSMISGYSKM 206
H + K D ++ +L+ MY++CG V+ A++VFDE+ ++++VSWNS+I+ + +
Sbjct: 173 VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 232
Query: 207 RHAGEAVGLFREMMEAGFQPNEMTLVSVLGACGELGDLELGTWVEEFVVENKMVLNSFI- 266
A EA+ +F+ M+E+ +P+E+TL SV+ AC L +++G V VV+N + N I
Sbjct: 233 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 292
Query: 267 GSALIHMYGKCGDLVSARRIFDS-------------------------------MKKKDK 326
+A + MY KC + AR IFDS M +++
Sbjct: 293 SNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 352
Query: 327 VTWNAMITG--QNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIY 386
V+WNA+I G QNG +EEA+ LF ++ S P + IL ACA + L LG Q ++
Sbjct: 353 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 412
Query: 387 ASERGLR------DDIYVATALVDMYAKCGSLDNAFRVFYGMPRKNEVSWNAMISALAFH 446
+ G + DDI+V +L+DMY KCG ++ + VF M ++ VSWNAMI A +
Sbjct: 413 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 472
Query: 447 GQAQEALALFKSMINEGGAASPNDITFVGVLSACVHAGLVDEGRRLFHLMSSSFGLVPKI 506
G EAL LF+ M+ G P+ IT +GVLSAC HAG V+EGR F M+ FG+ P
Sbjct: 473 GYGNEALELFREMLESG--EKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 532
Query: 507 EHYSCMVDLLSRAGHLEEAWDFVNKMPEKPDEVILGALLGACQKRKNVDISERVMKLLLE 566
+HY+CMVDLL RAG LEEA + +MP +PD VI G+LL AC+ +N+ + + V + LLE
Sbjct: 533 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE 592
Query: 567 LEPSNSGNYVISSRLYANLRRWDDSARMRLLMKQKGVSKTPGCSWIDINSQLHEFHAGDV 609
+EPSNSG YV+ S +YA L +W+D +R M+++GV+K PGCSWI I H F D
Sbjct: 593 VEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDK 652
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O64705 | 1.2e-186 | 54.66 | Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana OX... | [more] |
Q9LN01 | 1.4e-118 | 37.79 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9SJZ3 | 5.1e-116 | 37.60 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
O82380 | 1.5e-115 | 35.31 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9SIT7 | 4.4e-112 | 36.33 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EUW3 | 0.0e+00 | 92.30 | pentatricopeptide repeat-containing protein At2g34400 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1KBU4 | 0.0e+00 | 91.64 | pentatricopeptide repeat-containing protein At2g34400 OS=Cucurbita maxima OX=366... | [more] |
A0A0A0LMG0 | 0.0e+00 | 91.48 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060420 PE=4 SV=1 | [more] |
A0A6J1DIG6 | 0.0e+00 | 90.69 | pentatricopeptide repeat-containing protein At2g34400 OS=Momordica charantia OX=... | [more] |
A0A1S3BRJ2 | 0.0e+00 | 90.16 | pentatricopeptide repeat-containing protein At2g34400 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
XP_038889591.1 | 0.0e+00 | 94.59 | pentatricopeptide repeat-containing protein At2g34400 [Benincasa hispida] | [more] |
KAG7029836.1 | 0.0e+00 | 92.43 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023521362.1 | 0.0e+00 | 92.46 | pentatricopeptide repeat-containing protein At2g34400-like [Cucurbita pepo subsp... | [more] |
XP_022929625.1 | 0.0e+00 | 92.30 | pentatricopeptide repeat-containing protein At2g34400 [Cucurbita moschata] | [more] |
XP_022997564.1 | 0.0e+00 | 91.64 | pentatricopeptide repeat-containing protein At2g34400 [Cucurbita maxima] | [more] |