Lsi11G007600 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G007600
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	OSBP(Oxysterol binding protein)-related protein 4B, putative
Location	chr11: 8575356 .. 8575916 (+)
RNA-Seq Expression	Lsi11G007600
Synteny	Lsi11G007600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGGCAATTTCATTGGGATATGAAGAGTAAAGTGATATCAAGAACATCTTCCATTGGTTGTTCTTCTCATAGCATTTATTACTCTGGAACAGCTGAAGGAGTCCCTTTCAAATGGGAAACACAACCAGGAACTCCCAAAGATCCTCCCCCTCAAGACTTGCTTCCACCCCTTAGCCCTCCACCCGCGGTCCTCAGCCTCGGGGTACCGAAACCGTGCATCGAGCAACCGAAATCCCGACCCCGACTCCGGATGAGGCTTAGGTTTTGGAAGAGGATCATGAAGAGTAAGGATGGTACGAGAGCTGCCCAAGCAACAACTATAGACTATAGCAATGGAGATCCTTTTAGTCATAATGATAAGTTGGAAACCTTTTCATTTCTTAGCTCTGATTGCGAGTTCATGGCGTCTCCTCGGGATTCAATGTCATCGTCAACGTCATCATCTTCTTCATCGCCATCGTCTTTCCTCGATTCGTTAACCTTGCGAAATACGGGGAGGCCTTCAAGTTGCAGTGCTAGGCAAATTAATAGAATTCTAGCTTGTTACCATTCCTAG

mRNA sequence

ATGGAAGGGCAATTTCATTGGGATATGAAGAGTAAAGTGATATCAAGAACATCTTCCATTGGTTGTTCTTCTCATAGCATTTATTACTCTGGAACAGCTGAAGGAGTCCCTTTCAAATGGGAAACACAACCAGGAACTCCCAAAGATCCTCCCCCTCAAGACTTGCTTCCACCCCTTAGCCCTCCACCCGCGGTCCTCAGCCTCGGGGTACCGAAACCGTGCATCGAGCAACCGAAATCCCGACCCCGACTCCGGATGAGGCTTAGGTTTTGGAAGAGGATCATGAAGAGTAAGGATGGTACGAGAGCTGCCCAAGCAACAACTATAGACTATAGCAATGGAGATCCTTTTAGTCATAATGATAAGTTGGAAACCTTTTCATTTCTTAGCTCTGATTGCGAGTTCATGGCGTCTCCTCGGGATTCAATGTCATCGTCAACGTCATCATCTTCTTCATCGCCATCGTCTTTCCTCGATTCGTTAACCTTGCGAAATACGGGGAGGCCTTCAAGTTGCAGTGCTAGGCAAATTAATAGAATTCTAGCTTGTTACCATTCCTAG

Coding sequence (CDS)

ATGGAAGGGCAATTTCATTGGGATATGAAGAGTAAAGTGATATCAAGAACATCTTCCATTGGTTGTTCTTCTCATAGCATTTATTACTCTGGAACAGCTGAAGGAGTCCCTTTCAAATGGGAAACACAACCAGGAACTCCCAAAGATCCTCCCCCTCAAGACTTGCTTCCACCCCTTAGCCCTCCACCCGCGGTCCTCAGCCTCGGGGTACCGAAACCGTGCATCGAGCAACCGAAATCCCGACCCCGACTCCGGATGAGGCTTAGGTTTTGGAAGAGGATCATGAAGAGTAAGGATGGTACGAGAGCTGCCCAAGCAACAACTATAGACTATAGCAATGGAGATCCTTTTAGTCATAATGATAAGTTGGAAACCTTTTCATTTCTTAGCTCTGATTGCGAGTTCATGGCGTCTCCTCGGGATTCAATGTCATCGTCAACGTCATCATCTTCTTCATCGCCATCGTCTTTCCTCGATTCGTTAACCTTGCGAAATACGGGGAGGCCTTCAAGTTGCAGTGCTAGGCAAATTAATAGAATTCTAGCTTGTTACCATTCCTAG

Protein sequence

MEGQFHWDMKSKVISRTSSIGCSSHSIYYSGTAEGVPFKWETQPGTPKDPPPQDLLPPLSPPPAVLSLGVPKPCIEQPKSRPRLRMRLRFWKRIMKSKDGTRAAQATTIDYSNGDPFSHNDKLETFSFLSSDCEFMASPRDSMSSSTSSSSSSPSSFLDSLTLRNTGRPSSCSARQINRILACYHS

Homology

[Close]

BLAST of Lsi11G007600 vs. ExPASy TrEMBL
Match: A0A6J1ENL5 (uncharacterized protein LOC111436141 OS=Cucurbita moschata OX=3662 GN=LOC111436141 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.5e-69
Identity = 147/191 (76.96%), Postives = 162/191 (84.82%), Query Frame = 0


Query: 1   MEGQFHWDMKSKVISRTSSIGCSSHSIYYSGTAEGVPFKWETQPGTPKDPPPQDLLPPLS 60
           M+G FHWDMKSKVI+RTSSIGCSS S YY G AEGVPFKWETQPGTPKDPPPQDLLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGVPKPCIEQPKSRPRLRMRLRFWKRIMKSKDGTRAAQATTIDYSNGDPFSHN 120
           PPPAV+SLG+P PCIE+PK+RPR  M+L FW+R+ KS+DG RAAQATTIDYS       N
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPTMKLWFWRRVKKSRDGGRAAQATTIDYS-------N 120

Query: 121 DKLETFSFLSSDCEFMASPRDSMSSSTSSSSSSPSSFLDSLTLRN-----TGRPSSCS-A 180
           DKLETFSFLSSDCEFMASPRDSMSS  SSSSSSPSS ++SLT+RN      GRPSSCS A
Sbjct: 121 DKLETFSFLSSDCEFMASPRDSMSS--SSSSSSPSSLIESLTVRNMGRVSLGRPSSCSTA 180

Query: 181 RQINRILACYH 186
            +I+RILACYH
Sbjct: 181 GKIHRILACYH 182

[Close]

BLAST of Lsi11G007600 vs. ExPASy TrEMBL
Match: A0A6J1K9Q8 (uncharacterized protein LOC111492375 OS=Cucurbita maxima OX=3661 GN=LOC111492375 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.3e-69
Identity = 147/192 (76.56%), Postives = 164/192 (85.42%), Query Frame = 0


Query: 1   MEGQFHWDMKSKVISRTSSIGCSSHSIYYSGTAEGVPFKWETQPGTPKDPPPQDLLPPLS 60
           M+G FHWDMKSKVI+RTSSIGCSS S YY G AEGVPFKWETQPGTPKDPPPQDLLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGVPKPCIEQPKSRPRLRMRLRFWKRIMKSKDGTRAAQATTIDYSNGDPFSHN 120
           PPPAVLSLG+P PCIE+PK+RPR  M+LRFW+R+ KS+D  RAAQATTIDYSNG      
Sbjct: 61  PPPAVLSLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDDGRAAQATTIDYSNG------ 120

Query: 121 DKLETFSFLSSDCEFMASPRDSM-SSSTSSSSSSPSSFLDSLTLR-----NTGRPSSC-S 180
            KLETFSFLSSDCEFMASPRDSM SSS+SSSSSSPSS ++SLT+R     + GRPSSC +
Sbjct: 121 -KLETFSFLSSDCEFMASPRDSMSSSSSSSSSSSPSSLIESLTVRHMGRVSLGRPSSCGT 180

Query: 181 ARQINRILACYH 186
           A +I+RILACYH
Sbjct: 181 AGKIHRILACYH 185

[Close]

BLAST of Lsi11G007600 vs. ExPASy TrEMBL
Match: A0A5D3BQA0 (Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00410 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.6e-68
Identity = 157/198 (79.29%), Postives = 168/198 (84.85%), Query Frame = 0


Query: 1   MEGQ-FHWDMKSKVISRTSSIGCSSHSIYYSGTA-EGVPFKWETQPGTPKDPPPQDLLPP 60
           MEGQ FHWDMK+KVISRTSSIGCSSHSIYYSGTA +GVPFKWETQPGTPKDPPPQDLLPP
Sbjct: 1   MEGQLFHWDMKNKVISRTSSIGCSSHSIYYSGTANQGVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVPKP-CIEQPKSRPRLRMRLRFWKRIMKSKDGTRAAQATTIDYSNGDPF 120
           LSPPPAVLSLGVPKP CI+QPKSR   RMRLRFWK+IMKS+DG RAAQ T ID+      
Sbjct: 61  LSPPPAVLSLGVPKPACIDQPKSRSLPRMRLRFWKKIMKSRDGGRAAQTTPIDH------ 120

Query: 121 SHNDKLETFSFLSSDCEFMA--SPRDSM-SSSTSSSSSSPSSFLDSLTLRNT-----GRP 180
            +NDKLETFSFLSSDCEFMA  SPRDSM SSSTSSSSSSPSSF+DSL + NT     GRP
Sbjct: 121 -YNDKLETFSFLSSDCEFMASPSPRDSMSSSSTSSSSSSPSSFIDSLNVGNTQKVSFGRP 180

Query: 181 SSC-SARQINRILACYHS 187
           SS  +A QINR+L CYHS
Sbjct: 181 SSWNNAWQINRMLVCYHS 191

[Close]

BLAST of Lsi11G007600 vs. ExPASy TrEMBL
Match: A0A5A7UK88 (Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00410 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 156/198 (78.79%), Postives = 167/198 (84.34%), Query Frame = 0


Query: 1   MEGQ-FHWDMKSKVISRTSSIGCSSHSIYYSGTA-EGVPFKWETQPGTPKDPPPQDLLPP 60
           MEGQ FHWDMK+KVISRTSSIGCSSHSIYYSGTA +GVPFKWETQPGTPKDPPPQDLLPP
Sbjct: 1   MEGQLFHWDMKNKVISRTSSIGCSSHSIYYSGTANQGVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVPKP-CIEQPKSRPRLRMRLRFWKRIMKSKDGTRAAQATTIDYSNGDPF 120
           LSPPPAVLSLGVPKP CI+QPKSR   RMRLRFWK+IMKS+DG RAAQ T ID+      
Sbjct: 61  LSPPPAVLSLGVPKPACIDQPKSRSLPRMRLRFWKKIMKSRDGGRAAQTTPIDH------ 120

Query: 121 SHNDKLETFSFLSSDCEFMA--SPRDSM-SSSTSSSSSSPSSFLDSLTLRNT-----GRP 180
            +NDKLETFSFLSSDCEFMA  SPRD M SSSTSSSSSSPSSF+DSL + NT     GRP
Sbjct: 121 -YNDKLETFSFLSSDCEFMASPSPRDPMSSSSTSSSSSSPSSFIDSLNVGNTQKVSFGRP 180

Query: 181 SSC-SARQINRILACYHS 187
           SS  +A QINR+L CYHS
Sbjct: 181 SSWNNAWQINRMLVCYHS 191

[Close]

BLAST of Lsi11G007600 vs. ExPASy TrEMBL
Match: A0A6J1FCU1 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111444457 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.0e-62
Identity = 137/185 (74.05%), Postives = 153/185 (82.70%), Query Frame = 0


Query: 1   MEGQFHWDMKSKVISRTSSIGCSSHSIYYSGTAEGVPFKWETQPGTPKDPPPQDLLPPLS 60
           M+  FHWD+K+KVISRTSSIGCSS SIYY GT EGVPFKWETQPGTPKDPPPQD+LPPL+
Sbjct: 1   MDTTFHWDVKNKVISRTSSIGCSSRSIYYCGTPEGVPFKWETQPGTPKDPPPQDMLPPLT 60

Query: 61  PPPAVLSLGVPKPCIEQPKSRPRLRMRLRFWKRIMKSKDGTRAAQATTIDYSNGDPFSHN 120
           PPPAVLSLG+PKPCIEQPK+RPR  +RLRFW+R    K+G R A+A TIDYSN D F + 
Sbjct: 61  PPPAVLSLGLPKPCIEQPKTRPRPLIRLRFWRR--SKKNGKRDARARTIDYSNEDRFGNP 120

Query: 121 DKLETFSFLSSDCEFMASPRDSMSSSTS---SSSSSPSSFLDSLTLRNTGRPSSCSARQI 180
           DKLETFSFLSSDCEFM S R+SM SS S   SSSSSPSSF +SLT+R   R  SC+A QI
Sbjct: 121 DKLETFSFLSSDCEFMTSSRNSMLSSPSLSLSSSSSPSSFFESLTVR---RRLSCNAWQI 180

Query: 181 NRILA 183
           NRILA
Sbjct: 181 NRILA 180

[Close]

BLAST of Lsi11G007600 vs. NCBI nr
Match: KAG7029810.1 (hypothetical protein SDJN02_08153, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.9 bits (694), Expect = 4.0e-69
Identity = 149/193 (77.20%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 1   MEGQFHWDMKSKVISRTSSIGCSSHSIYYSGTAEGVPFKWETQPGTPKDPPPQDLLPPLS 60
           M+G FHWDMKSKVI+RTSSIGCSS S YY G AEGVPFKWETQPGTPKDPPPQDLLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGVPKPCIEQPKSRPRLR--MRLRFWKRIMKSKDGTRAAQATTIDYSNGDPFS 120
           PPPAV+SLG+P PCIE+PK+RPR R  M+LRFW+R+ KS+DG RAAQATTIDYS      
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPRPTMKLRFWRRVKKSRDGGRAAQATTIDYS------ 120

Query: 121 HNDKLETFSFLSSDCEFMASPRDSMSSSTSSSSSSPSSFLDSLTLRN-----TGRPSSCS 180
            NDKLETFSFLSSDCEFMASPRDSMSS  SSSSSSPSS ++SLT+RN      GRPSSCS
Sbjct: 121 -NDKLETFSFLSSDCEFMASPRDSMSS--SSSSSSPSSLIESLTVRNMGRVSLGRPSSCS 180

Query: 181 -ARQINRILACYH 186
            A +I+RILACYH
Sbjct: 181 TAGKIHRILACYH 184

[Close]

BLAST of Lsi11G007600 vs. NCBI nr
Match: XP_022929606.1 (uncharacterized protein LOC111436141 [Cucurbita moschata])

HSP 1 Score: 271.6 bits (693), Expect = 5.2e-69
Identity = 147/191 (76.96%), Postives = 162/191 (84.82%), Query Frame = 0


Query: 1   MEGQFHWDMKSKVISRTSSIGCSSHSIYYSGTAEGVPFKWETQPGTPKDPPPQDLLPPLS 60
           M+G FHWDMKSKVI+RTSSIGCSS S YY G AEGVPFKWETQPGTPKDPPPQDLLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGVPKPCIEQPKSRPRLRMRLRFWKRIMKSKDGTRAAQATTIDYSNGDPFSHN 120
           PPPAV+SLG+P PCIE+PK+RPR  M+L FW+R+ KS+DG RAAQATTIDYS       N
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPTMKLWFWRRVKKSRDGGRAAQATTIDYS-------N 120

Query: 121 DKLETFSFLSSDCEFMASPRDSMSSSTSSSSSSPSSFLDSLTLRN-----TGRPSSCS-A 180
           DKLETFSFLSSDCEFMASPRDSMSS  SSSSSSPSS ++SLT+RN      GRPSSCS A
Sbjct: 121 DKLETFSFLSSDCEFMASPRDSMSS--SSSSSSPSSLIESLTVRNMGRVSLGRPSSCSTA 180

Query: 181 RQINRILACYH 186
            +I+RILACYH
Sbjct: 181 GKIHRILACYH 182

[Close]

BLAST of Lsi11G007600 vs. NCBI nr
Match: XP_022997465.1 (uncharacterized protein LOC111492375 [Cucurbita maxima])

HSP 1 Score: 271.2 bits (692), Expect = 6.8e-69
Identity = 147/192 (76.56%), Postives = 164/192 (85.42%), Query Frame = 0


Query: 1   MEGQFHWDMKSKVISRTSSIGCSSHSIYYSGTAEGVPFKWETQPGTPKDPPPQDLLPPLS 60
           M+G FHWDMKSKVI+RTSSIGCSS S YY G AEGVPFKWETQPGTPKDPPPQDLLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFKWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGVPKPCIEQPKSRPRLRMRLRFWKRIMKSKDGTRAAQATTIDYSNGDPFSHN 120
           PPPAVLSLG+P PCIE+PK+RPR  M+LRFW+R+ KS+D  RAAQATTIDYSNG      
Sbjct: 61  PPPAVLSLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDDGRAAQATTIDYSNG------ 120

Query: 121 DKLETFSFLSSDCEFMASPRDSM-SSSTSSSSSSPSSFLDSLTLR-----NTGRPSSC-S 180
            KLETFSFLSSDCEFMASPRDSM SSS+SSSSSSPSS ++SLT+R     + GRPSSC +
Sbjct: 121 -KLETFSFLSSDCEFMASPRDSMSSSSSSSSSSSPSSLIESLTVRHMGRVSLGRPSSCGT 180

Query: 181 ARQINRILACYH 186
           A +I+RILACYH
Sbjct: 181 AGKIHRILACYH 185

[Close]

BLAST of Lsi11G007600 vs. NCBI nr
Match: XP_023546389.1 (uncharacterized protein LOC111805512 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.4 bits (690), Expect = 1.2e-68
Identity = 146/191 (76.44%), Postives = 162/191 (84.82%), Query Frame = 0


Query: 1   MEGQFHWDMKSKVISRTSSIGCSSHSIYYSGTAEGVPFKWETQPGTPKDPPPQDLLPPLS 60
           M+G FHWDMKSKVI+RTSSIGCSS S YY G AEGVPF WETQPGTPKDPPPQDLLPPLS
Sbjct: 1   MDGNFHWDMKSKVIARTSSIGCSSRSTYYCGAAEGVPFVWETQPGTPKDPPPQDLLPPLS 60

Query: 61  PPPAVLSLGVPKPCIEQPKSRPRLRMRLRFWKRIMKSKDGTRAAQATTIDYSNGDPFSHN 120
           PPPAV+SLG+P PCIE+PK+RPR  M+LRFW+R+ KS+DG RAAQATTIDYS       N
Sbjct: 61  PPPAVISLGLPLPCIEKPKTRPRPTMKLRFWRRVKKSRDGGRAAQATTIDYS-------N 120

Query: 121 DKLETFSFLSSDCEFMASPRDSMSSSTSSSSSSPSSFLDSLTLRN-----TGRPSSCS-A 180
           DKLETFSFLSSDCEFMASPRDSMSS  SSSSSSPSS ++SLT++N      GRPSSCS A
Sbjct: 121 DKLETFSFLSSDCEFMASPRDSMSS--SSSSSSPSSLIESLTVQNMGRASLGRPSSCSTA 180

Query: 181 RQINRILACYH 186
            +I+RILACYH
Sbjct: 181 GKIHRILACYH 182

[Close]

BLAST of Lsi11G007600 vs. NCBI nr
Match: TYK01355.1 (putative OSBP(oxysterol binding protein)-related protein 4B [Cucumis melo var. makuwa])

HSP 1 Score: 267.7 bits (683), Expect = 7.5e-68
Identity = 157/198 (79.29%), Postives = 168/198 (84.85%), Query Frame = 0


Query: 1   MEGQ-FHWDMKSKVISRTSSIGCSSHSIYYSGTA-EGVPFKWETQPGTPKDPPPQDLLPP 60
           MEGQ FHWDMK+KVISRTSSIGCSSHSIYYSGTA +GVPFKWETQPGTPKDPPPQDLLPP
Sbjct: 1   MEGQLFHWDMKNKVISRTSSIGCSSHSIYYSGTANQGVPFKWETQPGTPKDPPPQDLLPP 60

Query: 61  LSPPPAVLSLGVPKP-CIEQPKSRPRLRMRLRFWKRIMKSKDGTRAAQATTIDYSNGDPF 120
           LSPPPAVLSLGVPKP CI+QPKSR   RMRLRFWK+IMKS+DG RAAQ T ID+      
Sbjct: 61  LSPPPAVLSLGVPKPACIDQPKSRSLPRMRLRFWKKIMKSRDGGRAAQTTPIDH------ 120

Query: 121 SHNDKLETFSFLSSDCEFMA--SPRDSM-SSSTSSSSSSPSSFLDSLTLRNT-----GRP 180
            +NDKLETFSFLSSDCEFMA  SPRDSM SSSTSSSSSSPSSF+DSL + NT     GRP
Sbjct: 121 -YNDKLETFSFLSSDCEFMASPSPRDSMSSSSTSSSSSSPSSFIDSLNVGNTQKVSFGRP 180

Query: 181 SSC-SARQINRILACYHS 187
           SS  +A QINR+L CYHS
Sbjct: 181 SSWNNAWQINRMLVCYHS 191

[Close]

BLAST of Lsi11G007600 vs. TAIR 10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-13
Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 0


Query: 14 ISRTSSIGCSSHSIYYSGTAEGVPFKWETQPGTPKDPPPQDLLPPLSPPPAVLSLGVPKP 73
          ISR SS+G      Y     EGVPF+WE QPGTP +  P++++PPLSPPPA+LSLG+PKP
Sbjct: 12 ISRNSSVG-----YYDERMPEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLSLGLPKP 71

Query: 74 --CIEQPKSRP-RLRMRLRFWKRI 95
             IE+PK+     +++LR WK +
Sbjct: 72 SISIEEPKNFVFPTKLKLRNWKHL 90

[Close]

BLAST of Lsi11G007600 vs. TAIR 10
Match: AT4G25850.2 (OSBP(oxysterol binding protein)-related protein 4B )

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-13
Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 0


Query: 14 ISRTSSIGCSSHSIYYSGTAEGVPFKWETQPGTPKDPPPQDLLPPLSPPPAVLSLGVPKP 73
          ISR SS+G      Y     EGVPF+WE QPGTP +  P++++PPLSPPPA+LSLG+PKP
Sbjct: 12 ISRNSSVG-----YYDERMPEGVPFEWEMQPGTPINTQPREVVPPLSPPPAMLSLGLPKP 71

Query: 74 --CIEQPKSRP-RLRMRLRFWKRI 95
             IE+PK+     +++LR WK +
Sbjct: 72 SISIEEPKNFVFPTKLKLRNWKHL 90

[Close]

BLAST of Lsi11G007600 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 8.7e-06
Identity = 27/51 (52.94%), Postives = 32/51 (62.75%), Query Frame = 0


Query: 19  SIGCSSHSI-YYSGTAEGVPFKWETQPGTPKDPPPQ-DLLPPLSPPPAVLS 68
           S  C S  I YY G A  VPF+WE+ PGTPK P  +   LPPL+PPP+  S
Sbjct: 57  SAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFS 107

The following BLAST results are available for this feature:

BLAST of Lsi11G007600 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi11G007600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENL5	2.5e-69	76.96	uncharacterized protein LOC111436141 OS=Cucurbita moschata OX=3662 GN=LOC1114361...	[more]
A0A6J1K9Q8	3.3e-69	76.56	uncharacterized protein LOC111492375 OS=Cucurbita maxima OX=3661 GN=LOC111492375...	[more]
A0A5D3BQA0	3.6e-68	79.29	Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var....	[more]
A0A5A7UK88	1.4e-67	78.79	Putative OSBP(Oxysterol binding protein)-related protein 4B OS=Cucumis melo var....	[more]
A0A6J1FCU1	3.0e-62	74.05	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111444457 PE=4 SV=1	[more]

BLAST of Lsi11G007600 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029810.1	4.0e-69	77.20	hypothetical protein SDJN02_08153, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022929606.1	5.2e-69	76.96	uncharacterized protein LOC111436141 [Cucurbita moschata]	[more]
XP_022997465.1	6.8e-69	76.56	uncharacterized protein LOC111492375 [Cucurbita maxima]	[more]
XP_023546389.1	1.2e-68	76.44	uncharacterized protein LOC111805512 [Cucurbita pepo subsp. pepo]	[more]
TYK01355.1	7.5e-68	79.29	putative OSBP(oxysterol binding protein)-related protein 4B [Cucumis melo var. m...	[more]

BLAST of Lsi11G007600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25845.1	1.9e-13	51.19	BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-rela...	[more]
AT4G25850.2	1.9e-13	51.19	OSBP(oxysterol binding protein)-related protein 4B	[more]
AT5G01790.1	8.7e-06	52.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..62
None	No IPR available	PANTHER	PTHR33257:SF6	OXYSTEROL-BINDING 4B-LIKE PROTEIN-RELATED	coord: 9..165
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 9..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G007600.1	Lsi11G007600.1	mRNA