Lsi11G007130 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G007130
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Cytochrome c oxidase subunit
Location	chr11: 7614338 .. 7616116 (+)
RNA-Seq Expression	Lsi11G007130
Synteny	Lsi11G007130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTCTTCCGTTTGATCTCTTCAAGCTTCAATTTGATCAGTCATGGCTGAGGTAAGCTTCGTTTCGCTCTCTTCCTGTGTTTAGTTGCAAGAAAATCAATGGTAGTGAATCGATTTTTCATTTCTTCTTTTGATGTTCTGTATTTTTCCTTTCATTTTTCCAATCATTAACGGCCTCGATTTGGACGCAATTATCGTTTTCTGTATGAAAATATGATTGCGTAATGCTTGTTTTGTTTGGATTATTTGTAGATTCTGAATTATAGTTTATGGAGGAAAGGCGTCTTTACTTTTTTGTCGATGTTTTCTACAAATAACTAATAAGCTTCACTGGTCAAAATTTCCGACGTATTTGAAGGAATTGTTGTTTACAATTGGAAAACCTCTGAATCCCCTCTTTAAATTGTCCCATCGCTGTCATTACCAAAATTAAGACTCACGTCATGAATACTGGTTGTGAGAGCAGAGAACTTAACGTGCTAATCTCACTATAGTTTCTTCTAAGAGGAAGATCCCATGCATTGAGGCAACAAGGGTTCTACCCGGGTTCTGCCCCGGTTCGGCCCGAATGTTTCTGATTGAAATATAACTGATATGTTTGTAGAAAAATAATTTACAAGAAGGAGATGCAACACCATATATTCTGTCAAATACAATTTATTTGACAATTGCCAAAGTAAACTTCACACTAGGGGAGAAAGTGTTGATGATTTGAGAAATATATGTTTATTAGAATAGTAGAAGATAATACATGGAGGATTAAACATGTCTCCATTCAGTATTCACATATGAGAAGGATAGTAAATGGAACTCCCAATAAGCAATAATAGAAGAAAGATCAGAAGAAGCACATCAAACTGTGTCAATTTAGCATAATTTTACACATGAAATAAATGTTTATGTTAAAAAAAAATCTTTTTGATGTATATATTGTGTCTATCCATGCTTCATACATGACATTGTGATTGTGCATGCTGTAGATAATGTTTCTTGCTGTTGTCAATAATTGAAGATTATAACCTAGGGACGTCAGTTTGTACTTCGTATCTTGGTGTTTGGCATGAGTTGAGGTATAGAAGGCACAAGATACCTGTAAAATGTTGCAATGTGTTGGTTGCTCATTTTGGAATAATGTTATTAGGAAAATGATTAATAACTACCCATATCTTATTAAATGAAAATTTAATGATGTGTATTGAGTGAGTATTTCTAAGACTAGTGGTTATCGTTTATCAAGATGATCCTCTTCAATGTCTATTTTATTTTTATTTGTTCTATGCCTTCTTGTTTGCCATCTCAGATTGAGCTGAAAACAGCACCAGCTGACTTTCGATTCCCTACTACTAATCAAACCAGGCACTGTTTCACTCGCTACATTGAGTTCCACAGGTGCATTTTTCTTACAACTTGGGATGAGGGTTAAAATGGAAAAATGTAGAGGGACTACAGTCTTCTGTGTTTTCATAGTTAGTTTTCACCTTAAATATGCAAAACTTTCCACAGGTGCCTGACAGCAAAGGGTGAGGAGTCTGGTGAATGTGAGAGATTTGCAAAGTACTATCGTGCTCTTTGCCCTGGTGAATGGGTGAGTTCTTTGTTGCATTTGGTGGTGTTTAAAGTATACAAAATTTTACTTATTCTATTTTTCCTGCTCATATCGATGCAGTTCTGCTAACATTTAGGTGCATTGCCACAAAAACTCTTTTGCCTTTTTTCAATGTTATAATTTTTCGAGTTTTGTATGCATATGCTCTAGATTAAATTCTATGTTCCAATCGTAA

mRNA sequence

AGTCTTCCGTTTGATCTCTTCAAGCTTCAATTTGATCAGTCATGGCTGAGAGGAAGATCCCATGCATTGAGGCAACAAGGGTTCTACCCGGGTTCTGCCCCGATTGAGCTGAAAACAGCACCAGCTGACTTTCGATTCCCTACTACTAATCAAACCAGGCACTGTTTCACTCGCTACATTGAGTTCCACAGGTGCCTGACAGCAAAGGGTGAGGAGTCTGGTGAATGTGAGAGATTTGCAAAGTACTATCGTGCTCTTTGCCCTGGTGAATGGGTGCATTGCCACAAAAACTCTTTTGCCTTTTTTCAATGTTATAATTTTTCGAGTTTTGTATGCATATGCTCTAGATTAAATTCTATGTTCCAATCGTAA

Coding sequence (CDS)

AGTCTTCCGTTTGATCTCTTCAAGCTTCAATTTGATCAGTCATGGCTGAGAGGAAGATCCCATGCATTGAGGCAACAAGGGTTCTACCCGGGTTCTGCCCCGATTGAGCTGAAAACAGCACCAGCTGACTTTCGATTCCCTACTACTAATCAAACCAGGCACTGTTTCACTCGCTACATTGAGTTCCACAGGTGCCTGACAGCAAAGGGTGAGGAGTCTGGTGAATGTGAGAGATTTGCAAAGTACTATCGTGCTCTTTGCCCTGGTGAATGGGTGCATTGCCACAAAAACTCTTTTGCCTTTTTTCAATGTTATAATTTTTCGAGTTTTGTATGCATATGCTCTAGATTAAATTCTATGTTCCAATCGTAA

Protein sequence

SLPFDLFKLQFDQSWLRGRSHALRQQGFYPGSAPIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVHCHKNSFAFFQCYNFSSFVCICSRLNSMFQS

Homology

[Close]

BLAST of Lsi11G007130 vs. ExPASy Swiss-Prot
Match: Q945L0 (Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.3e-28
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 35 IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 93
          IELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGEES +CERFAKYYRALCPGEWV
Sbjct: 5  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEWV 62

[Close]

BLAST of Lsi11G007130 vs. ExPASy Swiss-Prot
Match: Q9SUD3 (Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=2 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 5.2e-28
Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 35 IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 93
          IELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGE++ ECERFAKYYRALCPGEWV
Sbjct: 5  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEWV 62

[Close]

BLAST of Lsi11G007130 vs. ExPASy Swiss-Prot
Match: Q9S7L9 (Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-23
Identity = 43/58 (74.14%), Postives = 55/58 (94.83%), Query Frame = 0


Query: 35  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 93
           I+L+TAPADFRFPTTNQTRHCFTRY+E+HRC+ AKG+++ EC++FAK+YR+LCP EWV
Sbjct: 117 IKLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWV 174

[Close]

BLAST of Lsi11G007130 vs. ExPASy Swiss-Prot
Match: O94581 (Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox12 PE=3 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 0


Query: 39 TAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 93
          T   D RFP TNQT+HCF  YI++ RC+ AKGE+   C++F   Y++LCP EWV
Sbjct: 17 TVGFDARFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWHAYQSLCPMEWV 70

[Close]

BLAST of Lsi11G007130 vs. ExPASy Swiss-Prot
Match: P14854 (Cytochrome c oxidase subunit 6B1 OS=Homo sapiens OX=9606 GN=COX6B1 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11
Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 38 KTAPADFRFPTTNQTRHCFTRYIEFHRC---LTAKGEESGECERFAKYYRALCPGEWV 93
          KTAP D RFP  NQTR+C+  Y++FHRC   +TAKG +   CE + + Y++LCP  WV
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWV 70

[Close]

BLAST of Lsi11G007130 vs. ExPASy TrEMBL
Match: A0A6J1I3B0 (Cytochrome c oxidase subunit OS=Cucurbita maxima OX=3661 GN=LOC111468624 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 9.2e-28
Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 33 APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 92
          A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Sbjct: 2  AEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 61

[Close]

BLAST of Lsi11G007130 vs. ExPASy TrEMBL
Match: A0A6J1K554 (Cytochrome c oxidase subunit OS=Cucurbita maxima OX=3661 GN=LOC111492384 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 9.2e-28
Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 33 APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 92
          A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Sbjct: 2  AEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 61

[Close]

BLAST of Lsi11G007130 vs. ExPASy TrEMBL
Match: A0A6J1EUQ5 (Cytochrome c oxidase subunit OS=Cucurbita moschata OX=3662 GN=LOC111436111 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 9.2e-28
Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 33 APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 92
          A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Sbjct: 2  AEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 61

[Close]

BLAST of Lsi11G007130 vs. ExPASy TrEMBL
Match: A0A1S3BUT2 (Cytochrome c oxidase subunit OS=Cucumis melo OX=3656 GN=LOC103493433 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.1e-27
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 35 IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 93
          IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Sbjct: 4  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 61

[Close]

BLAST of Lsi11G007130 vs. ExPASy TrEMBL
Match: A0A6J1DIX3 (Cytochrome c oxidase subunit OS=Momordica charantia OX=3673 GN=LOC111020894 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.7e-27
Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 33 APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 92
          A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEWV
Sbjct: 2  AEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWV 61

[Close]

BLAST of Lsi11G007130 vs. NCBI nr
Match: XP_022997477.1 (cytochrome c oxidase subunit 6b-2 [Cucurbita maxima])

HSP 1 Score: 132.9 bits (333), Expect = 1.9e-27
Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 33 APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 92
          A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Sbjct: 2  AEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 61

[Close]

BLAST of Lsi11G007130 vs. NCBI nr
Match: XP_022969669.1 (cytochrome c oxidase subunit 6b-2-like [Cucurbita maxima])

HSP 1 Score: 132.9 bits (333), Expect = 1.9e-27
Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 33 APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 92
          A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Sbjct: 2  AEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 61

[Close]

BLAST of Lsi11G007130 vs. NCBI nr
Match: XP_038889175.1 (cytochrome c oxidase subunit 6b-2 isoform X2 [Benincasa hispida])

HSP 1 Score: 132.9 bits (333), Expect = 1.9e-27
Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 33 APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 92
          A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Sbjct: 2  AEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 61

[Close]

BLAST of Lsi11G007130 vs. NCBI nr
Match: XP_022929560.1 (cytochrome c oxidase subunit 6b-2 [Cucurbita moschata] >XP_023536781.1 cytochrome c oxidase subunit 6b-2 [Cucurbita pepo subsp. pepo] >XP_023547233.1 cytochrome c oxidase subunit 6b-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 132.9 bits (333), Expect = 1.9e-27
Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 33 APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 92
          A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Sbjct: 2  AEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 61

[Close]

BLAST of Lsi11G007130 vs. NCBI nr
Match: XP_038889174.1 (cytochrome c oxidase subunit 6b-2 isoform X1 [Benincasa hispida])

HSP 1 Score: 132.5 bits (332), Expect = 2.5e-27
Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 32 SAPIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW 91
          S  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW
Sbjct: 2  SPQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW 61

Query: 92 V 93
          V
Sbjct: 62 V 62

[Close]

BLAST of Lsi11G007130 vs. TAIR 10
Match: AT5G57815.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 126.3 bits (316), Expect = 1.7e-29
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 35 IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 93
          IELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGEES +CERFAKYYRALCPGEWV
Sbjct: 5  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEWV 62

[Close]

BLAST of Lsi11G007130 vs. TAIR 10
Match: AT4G28060.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 125.2 bits (313), Expect = 3.7e-29
Identity = 54/58 (93.10%), Postives = 56/58 (96.55%), Query Frame = 0


Query: 35 IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 93
          IELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGE++ ECERFAKYYRALCPGEWV
Sbjct: 5  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEWV 62

[Close]

BLAST of Lsi11G007130 vs. TAIR 10
Match: AT1G22450.1 (cytochrome C oxidase 6B )

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24
Identity = 43/58 (74.14%), Postives = 55/58 (94.83%), Query Frame = 0


Query: 35  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 93
           I+L+TAPADFRFPTTNQTRHCFTRY+E+HRC+ AKG+++ EC++FAK+YR+LCP EWV
Sbjct: 117 IKLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWV 174

[Close]

BLAST of Lsi11G007130 vs. TAIR 10
Match: AT1G32710.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10
Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 40  APADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV 93
           A  + RFP TN+TRHCF R++++H+C+   G ++ +C     Y R++CP E V
Sbjct: 59  AAVEERFPVTNETRHCFNRFMQYHKCIEKNGRDANDCNNLRDYVRSICPEELV 111

The following BLAST results are available for this feature:

BLAST of Lsi11G007130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945L0	2.3e-28	94.83	Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=...	[more]
Q9SUD3	5.2e-28	93.10	Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=...	[more]
Q9S7L9	1.7e-23	74.14	Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=...	[more]
O94581	2.0e-11	53.70	Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (str...	[more]
P14854	2.0e-11	51.72	Cytochrome c oxidase subunit 6B1 OS=Homo sapiens OX=9606 GN=COX6B1 PE=1 SV=2	[more]

BLAST of Lsi11G007130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3B0	9.2e-28	98.33	Cytochrome c oxidase subunit OS=Cucurbita maxima OX=3661 GN=LOC111468624 PE=3 SV...	[more]
A0A6J1K554	9.2e-28	98.33	Cytochrome c oxidase subunit OS=Cucurbita maxima OX=3661 GN=LOC111492384 PE=3 SV...	[more]
A0A6J1EUQ5	9.2e-28	98.33	Cytochrome c oxidase subunit OS=Cucurbita moschata OX=3662 GN=LOC111436111 PE=3 ...	[more]
A0A1S3BUT2	2.1e-27	100.00	Cytochrome c oxidase subunit OS=Cucumis melo OX=3656 GN=LOC103493433 PE=3 SV=1	[more]
A0A6J1DIX3	2.7e-27	96.67	Cytochrome c oxidase subunit OS=Momordica charantia OX=3673 GN=LOC111020894 PE=3...	[more]

BLAST of Lsi11G007130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997477.1	1.9e-27	98.33	cytochrome c oxidase subunit 6b-2 [Cucurbita maxima]	[more]
XP_022969669.1	1.9e-27	98.33	cytochrome c oxidase subunit 6b-2-like [Cucurbita maxima]	[more]
XP_038889175.1	1.9e-27	98.33	cytochrome c oxidase subunit 6b-2 isoform X2 [Benincasa hispida]	[more]
XP_022929560.1	1.9e-27	98.33	cytochrome c oxidase subunit 6b-2 [Cucurbita moschata] >XP_023536781.1 cytochrom...	[more]
XP_038889174.1	2.5e-27	96.72	cytochrome c oxidase subunit 6b-2 isoform X1 [Benincasa hispida]	[more]

BLAST of Lsi11G007130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57815.1	1.7e-29	94.83	Cytochrome c oxidase, subunit Vib family protein	[more]
AT4G28060.1	3.7e-29	93.10	Cytochrome c oxidase, subunit Vib family protein	[more]
AT1G22450.1	1.2e-24	74.14	cytochrome C oxidase 6B	[more]
AT1G32710.1	1.7e-10	41.51	Cytochrome c oxidase, subunit Vib family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003213	Cytochrome c oxidase, subunit VIb	PFAM	PF02297	COX6B	coord: 45..92 e-value: 3.7E-13 score: 49.5
IPR003213	Cytochrome c oxidase, subunit VIb	CDD	cd00926	Cyt_c_Oxidase_VIb	coord: 35..92 e-value: 1.26198E-25 score: 90.0598
IPR036549	Cytochrome c oxidase, subunit VIb superfamily	GENE3D	1.10.10.140	Cytochrome c oxidase, subunit VIb	coord: 32..106 e-value: 1.2E-23 score: 84.8
IPR036549	Cytochrome c oxidase, subunit VIb superfamily	SUPERFAMILY	47694	Cytochrome c oxidase subunit h	coord: 35..96
None	No IPR available	PANTHER	PTHR46281:SF8	CYTOCHROME C OXIDASE SUBUNIT 6B-2-RELATED	coord: 35..96
None	No IPR available	PANTHER	PTHR46281	CYTOCHROME C OXIDASE SUBUNIT 6B	coord: 35..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G007130.1	Lsi11G007130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0045277	respiratory chain complex IV