Lsi11G007050 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi11G007050
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-adenosyl-l-methionine decarboxylase leader peptide
Locationchr11: 7483280 .. 7490755 (-)
RNA-Seq ExpressionLsi11G007050
SyntenyLsi11G007050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATGAATTGACACAACAAATTTATAATGGTTCATTTCAAATTTAAAAATATGCTCAATGTTTGTGACAACAAGTTTTACAAAAGTATATATTGTGAAGATTATAATAATACTCTAAAACCTTCCAAAACGATTCTTGCTATCTTTCACTACAATAGCAAAATTCGTTATCACTCTTTAAATTAGGGTTAGTAATCGGTTTTGGAGCCAACCAAAAACCAAACTAAATCAATTGGTTTTATAAAGAAGGAAAGGAATCGAAATTGATGTTTAGTAAAGAATAAAACTACTAGATTGGTTTTTATTCGGTTCAGTATATTATCGATTTGATTCTTGGTTTTTTACTTTTTTTTTTTCTCTTTTTTACAAGTTTTTATTTTTATTTTTGCTTTTGATTTGAATGGTCTTTTTGCTATTTTCATATTAAAATTAGTCCTTTTTTTATATATATATACATAGATTAAAATTTTATTTTTTTGGCATTTTTCTAAATAACAAAACATACACAGTAATAATTATACTTGCACCATAATAATTGGTATTTTTTTCTAAATAAAAAATATGCATGCACCGTAATAATTAAAATACTGAAAAGTGCTTAAGGTTATAGTTTATTTTTAAGGGTATATATACTCTCTGTTTGGTTTGGGTTTGATTGATTTTTTCAACAAAAAATCGATCGAACCAATAATTTTTTGTTTTCTTCAAATACAAATCAAGATTCCAATTTTATACTAGACAAACCAAATCAAACTAAATTAAGTTTTTTTTGTTATTTTGTTACACTCCTACTTTAAATCATTGCCTAAGTTTTACAAGGGTGATTACCTAAACTCTCTAGTGTATATTTCAATTTTTCTTCTAGCCATCACAATTTTTCTTCCTCTATTTTAGAATGTCCTAAAATATATATAATATTACAACATATCATATATAGGAGCTACCAGATAAGGGATCGTTAGATGACTATGATTTATGCAAAGAAAATCATGTCAATGCTATGGCTCTATTATGGAGCCTCACGACACTCCCCACTCGAAACATTACTATCTAAAATAGTATTATTTTTCATTAATATTTTCTTCTAAGGGGCTGTTTGGTTTAAAGTTTTATAGATGTCTGAGAATAAAGTATGTCGATGTTTGGAAATCAAAGATGATTATGTTTGGCTATGCATATGAAAAATGCTATCAGAATTTTACGGTCTAACCCTTCTTTAGCAATACTTCTAATAAACTTGTCCACTTTGTGCATTTTCACCAACTCGTGTTTTGAAATAGCCTTCCAATGAGTCTTGTTGATAATTAAGGCTACTCCACATAATGATCCAACAATTTATAGAGTATTTTTTTTAATATAAAAAATGAGAACAAGGATTTGAAGCTTCGATCTAAAAGAAGAATTACATACCTAATTAATTATTGGAGCCATGCTCACGTTACTTGTGTAAAATCATTTCTAAATGTAGTGTAACCAAACAAACTTATAATTAAGAACGTCAAAACATTTGACTATTTTATTAGGACAATGTTTATTTAATAGAAATTTGACAAGAAAACAATGTTAAAAATGTATTTCAATTAGTTGTATGTTAATGTTGGGGTTTGTGTCGCAAAACCTCATAGTTAATTAGTTATTTAATATAATATTAAATATGCAATATTAAATTATTCATTATAGTAAAAATTCAAGGTTATTAGATGTAATCTTGAATAATATGTGGTTAACATACATGTGGATCATGTTCAAATAATAACCTACAGGGTCTATAGTATATGGATAAGGTTGGGGTACCTTATTTTGGTGACACTATAGATACGACCCACTTTATAATTGTTACAAAATGTTTGATCTAAATCGTTCATGTGGAGACATGTGAGTGGGGGTGTCCTATACAAATAGTTTAAGACTGGACCACGAAATAATTAATCTCTCTTTGTAAATCTGTTAATTGAAGAGATTAATATTTCGCAGGATGATCATATATGACTCGATCTTAATCTTGAGTGAGTTATGAACTCCTGTCTGTGAGGACTCGTCCTTTGCATGGGTGAGAGTGGCTCGAGTCGTCAACTTAATATGTCTACCATTTTGGGGACTTGACAAGATGAGGAGCACGTAATTTCATAAGATAAAATTCACCCATTCCCGTATATGGAAAGTAGATGAGTAGTTCCCTTAAGTGCTGACTATAAGACTTGAACAAGGAGTCTCACCTTCCACTGACCCGAGAGGGACTTGGTTTATGGTTTGACCATAAACAAATTGTTTATTAAAGGATCAACGGTATTTAAGGAGATAAAGGTAATTACAAGGGTAAACTAGATTTTTAACACAGCTGTATATTTACGAACAACTCGTGAATGATCGACTTACTTGCAATGGTTATATCTATGAACGCAACTTGTCCTCCAATGCATAAGAGTGAAACTATAGGCATATAGTATTTTGTTCTATATATAGTTAATGAATAAATATTAATTAAGTAAGAGTTTAATTAATTAATCTTGTATCATTGAAACTTATAATCTGTAGGTCCATAAGATCCACTTGCTAGCTCACAACGGACCAACAAGGATCAAAATTATTGAAAAAAAATTTGAAACGTGCGAATTTATTGAAGGAAAAATATATTTATTGTATTTGATACAATTAATATAAGTATTAATGTACTATAATACATTATTATAAAATTAATTTGAATGAGATTAATGAATTTTAATATGAATCAAATAATTAATGAATAATTATAAGGGGTCTTTCCACAAATAGAAAAAAAAACAAAAGTAATTACACATATAGAAAAAAAAAAAGATGGAAAATACAAAAGCATGAGGTGCACTTTTTTCTATATGTGTAATTACTTTTGTTTTTTTTTCTATACACAACAATTTCCCTAATTATAATTATCACTAAGATTATCCAAATCATCTAAATCATTTTAATATGAGATATTAATATGAGATATTAAGATGGATAATTATAACTAATTAGGTTTTATCCTATTTAGGTTCTATAAATAGGACCTTGTGGAGAACACTAGAGGTATTTTAAAAGTTACACGAATCCTCTCTAAAATTCTCCCAAAATACAAAGAAAGGTTTTCTGATTTAACTTTTCTTTCAAGAAGGCTTTCACAAGCCGGATCCTTGCTAGAGTTATAGCGAGGAAGACCTCGTATAGGAGAATATCTATAGGAGAAGGTTTTCGATGCAACTACGTTTCTACAAAGGTATGATTCTCATATGCTTAACCCATTTTACTATTTTTTGTATGGTTTTAATTTTAATGAAAAATCAGAGCATGCGATTTTATCGCTTCCGCTGCGGGATCGAAATGTTTGATCCCATTCAGTTGAACTATCCTATCTATATGATTTGGTTTTGCAAAATATAGACTATTTTTTTCACTTGTCTTTAATGGTTTTTTTTAGTAGTACAAGTTCGGTTGAGATTTGAACATTTGACCTCTAGATAAAAAAGTGTATGTCTTATGCTAATTGAATTATATTCATGTTGACTTTGTCTTTAATGTTTCAAATGTCTCAATTCCACTCTTAAGGTATCTATTTTAAATATTAAAAAAAAATCATACTCGATAATAGCATTATTTGACGTGAACAAACAAAATAAATAGAAAATTTTGAATTTTGTTATTTATGAGATAGCCAATTTTATAATACTTATATGTCAATCAGACTATAACTCAACTGAATAAGACATTTATCACTCATCAAGAAGTCGAATGTTCAAAATTTCACCAATACATATGTTAAAACTTAAATGTATTATTGGCTAATTTGAGATGAATATGTAACCAAAAAAAAAAAAAAAGCGTTTAAATGGGGGGTGGTGGGGAATATTGTTTTCTTAATGTCCACCATAAATTTTTATTTTATTTTAATTTAGTAATAGAATTTGATAGGGTATCGGTTAAAAGGCTTTGCCCGTAAAGGACATATTAAGAAACTAAATTACATATTTAATTTTAAGGCTGAATTATTAAAAATGCCGTTGAAGTATGTACTTTATATCAAAATATCGTTCATCTTTCAAAAGTTTCAAAAATATCCTTTAACTTTTTAAAAGTTTCAAAAATATCCTTAACTAAAAAAAGTTCAAAAATACCTTCATCGTAAGTATATGAACACAAACTGTTAATACATCATTACAAAATTAACTTTAAAATAAAATAAAATAAAGTTTATAAGTGCTCCAAACATTAATATAGTGATCAATTTGTTTGAAGTTTTCTTAAATTAGAAAAAAATGAATTTTAAAACAAATTATATAGATATATATCCTCATCTTTTTTTCATATAGATACTCTTATTTTCTCTTAATTTTCTCATTCTCAACTTACACCAATGGTTAGTAGTTGAGTGTGTGTTAATAATCGAATACATTTTTTTTATTTGACTATTTATTGTTTTGGTATATTTAAGAGGAGATTTTGATTTTAGAATTTTGTGAGATTTTATAGAATTTTATGTTTTAACTTAAAATTTTGGTTGGTAAGAAAATTGGTGTAAGCTAAGAACTGAAAAATTAACAGCAAAATGAGAGTATCTATATGAAAAAAAAATGAGAATATCTTTATAATTTATTTTAAAGTTCATTCTTTTAAACTTAAGAAAACTTCAAACAAATTGACCGTCATATTAATGTTATGAGCAATTTTAAACTTTTTTTTTTTCATTTTAAAGTTATTTTTGTAACAAGGTATTAATGGTTTCTATTTATAAACTTACCGTGAAGGTACTTTTGAACTTTTTTTTGAATTAAAGGTATTTTTGAAACTTTTGAAAAGTTCAGGGATATTTTGAAACAAAACTTCAACGATTTCATCCAAAACTAACCGTAGGTATTTTTTTGTAACTCTTTTTGTAAGTTTAGGTGTATTTTTTAAACTTTTGAAAGTTTAGATGTATTTTTTTACCCAAATTGTATTATTTAGGGGCAATTTTTTTTTTATAATTTAACCTTATTTAAATGTTACCTTGCAAAGTAAGAAAGTTTGATAAAAACACATTATTCTTTTTCTTTCATTTATCATCTAAAGTCTTTTCACAATTTTGCAAATGTTAAAGGGTAGAAATAAAGTTTATGGAATAGACATAGAGATTTCAACTTTTAGGCCTGTTTGGATTGAGTTGAGTTCATATCTTTCACCCCAAACACTCCCTAAATGTTTATAAACATTTTTTTCCACTTATAAATACTTATTTAAACACTTATATTTTTTTTTTTTATAGATATGATTATTTTTAACCGTTCTGAAAGTGATTACATAAAAATCTTAACTGCTTTGAGTGCTTGGTAACATTGATTGTGAATGAATTTGTTAATTCTCATAGCTCAAATTGATTAGATCGATGACAATTTCTTTCTTTAAATAATATCATTTTTGTAATTAAAAAAAATTCTCCTATTTCTCTTATATTTAACAAAAATCTTATACTTAATAAACATAATCTAGAGTAAGCAAAACAAAAATTAAAGTTGAAAGTATATATTATATAATATTCTGAATAATTATTTAAAACTATAGATTATTGACAAAAAAATTATGCAAAATTTGATAGTGGATTTATTTAGTCATTATTGTTAATCAAACAATTTAACATTATTTACAAACCTCTAATTTACTCCACTTTACAACTTTTTTTTCTTTTAAAAAAGTAAAGTTGTTAACCATTATCTTTAAAGCTACACCAACTCCAAACTAAGACGAATATTTTTAAGTAGCTAAGAGTTTGTTTTGTAGAAAATTCATAGTATGTTTTATGTTTTCAGATTCACTGACAACTCGGATTCAGTTTCTGAAAACTGTTTTCGAATTTCGTGATTCAGACCGTGCAAATTTGAAAACAATATTTTTATGTATTCATTGTATCCAGATTTTGAATTTTAAATTTTAAAATGCAGAATTATATATTAAATAAAGATAAAAACATTTAGAAATACAATATTTAATGTTATAAACTCAATTCATTTTTTTAGAAAAAATGTATATGTATTATGTAATGTATTATAAATTATATAATATTACAAAATAATAATGATAAATTTTTTTAAAGATAAATCATATTCATAAATAAATCAATAATAATTTATTGTCAACTAAATATTAGTTGGTAACTACAACTAGTTTTATGATTTATAAATGTATAGTATCATACACATTTTAAACAACTATTTAAATTAGAGTCTAACTTCTGAATCTGCTACCAAACACATATATGAAAATATGAAATACAATTATGTTTTCATTGAATCTTTTATTTTCAAATTTCTTTTCAAATTCTCCACGAAATAGACCCTAAACTATCTTTAGATCACCAACGAGTGAAATGATGAAAAGTTATAAACCTACCTCGTCATAACATTTGGGTAATTTTGAGAAATGAAATTTGAGAAAGGGATAGATATGCAAAAGAGAAAACTACATTTGGGTAATTTTGAGAAATAAAATTTGAAAAAGGGGTAGATATGCAAAAGAGAAAAACTACATTTGGGTAATTTTGAGAAATAAAATTTGAGAAAGGGGTAGATATGCAAAAGAGAGAACTACAGATATATATTCCCTTTCTCTGATCCATTTTAGGCCAAGTAAAAATTCGACGTGCCTAGTTCTCCCCCCTCGCCTCACTGCCACGTGGACACCCCACGTGCGATGAAAATTTTGCAGAAAGCCCCTCAACTATTCCAAACTTTTCTGATACGGCCACTCCCAAACTCACCACTTCCACTCTGCATTCTTATTCTTTAGTTCCTTTTTTTTCCATAAACGCCACTCCTCCCAGCGTTTCTATAAATAGCCTTTCTCCATTTTCTTCTTTACCTCACATAATCAAATCCTTCGTTCCCTCTGAATCTCTCTTTCTTGAGCCAAAAATTCTTCTTACCCCTACCAATTTTCTTGTGGTATTCAAATCTTTCTTTCTTTGGAAATTTGCCGAAGAATTCCTGCCTTTTCCCTATATTTATTCCGCCATTGACGAAGATTTTGTAAGTATTCGGATTATTTTTTAGCTCTGGTGTTTGATTTCGATTCTTCTTTTCCGTTTCTCTTCTTTTTTGAAAGGTATTTTTTGAGCTATTGCATTTCGGTGTGTTTGAGAATCTTGATCTGAACTTCGGCCGTGTAATTTCTGAATTGTGGAGTTTTGTTCTGTTTTTGTTGCAGAGAAGAAGCGTGGATGTTGTAATGGAGGCGAAAGGCGGTAAGAAGAAATCTAGCAGTAGTAGTAGCAAGAGTAGTAAAAGGCAACAATACGAAGCTCCGCTTGGATACATTATTGAAGACGTTCGTCCCCACGGTGGCATTGAGAAGTTCCGATCTGCTGCTTATTCCAACGTAAGATTGTTCTTCGATTTCTTATTCGAGTTGTTCTTGAGTTAGCTTTGTGAATTCTTGTGTTGTAATTTGATTTTCTTTTCCTTTTGGCAGTGCGTGAGGAAGCCATCCTGA

mRNA sequence

ATGGTAATAGAATTTGATAGGAGAAGAAGCGTGGATGTTGTAATGGAGGCGAAAGGCGGTAAGAAGAAATCTAGCAGTAGTAGTAGCAAGAGTAGTAAAAGGCAACAATACGAAGCTCCGCTTGGATACATTATTGAAGACGTTCGTCCCCACGGTGGCATTGAGAAGTTCCGATCTGCTGCTTATTCCAACTGCGTGAGGAAGCCATCCTGA

Coding sequence (CDS)

ATGGTAATAGAATTTGATAGGAGAAGAAGCGTGGATGTTGTAATGGAGGCGAAAGGCGGTAAGAAGAAATCTAGCAGTAGTAGTAGCAAGAGTAGTAAAAGGCAACAATACGAAGCTCCGCTTGGATACATTATTGAAGACGTTCGTCCCCACGGTGGCATTGAGAAGTTCCGATCTGCTGCTTATTCCAACTGCGTGAGGAAGCCATCCTGA

Protein sequence

MVIEFDRRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Homology
[Close]
BLAST of Lsi11G007050 vs. ExPASy TrEMBL
Match: A0A5D3BCP3 (S-adenosylmethionine decarboxylase proenzyme-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00170 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.1e-25
Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 0 

Query: 7  RRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCV 66
          +RRSVDVVME KGGKKKS+SSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCV
Sbjct: 12 KRRSVDVVMETKGGKKKSNSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCV 71

Query: 67 RKPS 71
          RKPS
Sbjct: 72 RKPS 75

[Close]
BLAST of Lsi11G007050 vs. ExPASy TrEMBL
Match: A0A1S3BUN9 (Adenosylmethionine decarboxylase OS=Cucumis melo OX=3656 GN=LOC103493485 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.8e-21
Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0 

Query: 15 MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 71
          ME KGGKKKS+SSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Sbjct: 1  METKGGKKKSNSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 56

[Close]
BLAST of Lsi11G007050 vs. ExPASy TrEMBL
Match: A0A0A0LM83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036690 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.3e-20
Identity = 55/57 (96.49%), Postives = 55/57 (96.49%), Query Frame = 0 

Query: 15 MEAKGGKKKS-SSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 71
          ME KGGKKKS SSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Sbjct: 1  METKGGKKKSNSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 57

[Close]
BLAST of Lsi11G007050 vs. ExPASy TrEMBL
Match: A5BJ64 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_017166 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-17
Identity = 52/62 (83.87%), Postives = 54/62 (87.10%), Query Frame = 0 

Query: 9   RSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRK 68
           +SVDVVME KGGKKKSSSSSS      QYE PLGYIIEDVRP+GGIEKFRSAAYSNCVRK
Sbjct: 492 QSVDVVMETKGGKKKSSSSSS-----LQYEVPLGYIIEDVRPNGGIEKFRSAAYSNCVRK 548

Query: 69  PS 71
           PS
Sbjct: 552 PS 548

[Close]
BLAST of Lsi11G007050 vs. ExPASy TrEMBL
Match: A0A7J0HEL3 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_29g0007080 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 9.3e-17
Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 0 

Query: 4   EFDRRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYS 63
           EF     ++ +ME+KGGKK SSSSSS SSK Q YEAPLGY IEDVRP+GGI+KFRSAAYS
Sbjct: 37  EFGLYGRLNDIMESKGGKKSSSSSSSSSSKSQFYEAPLGYSIEDVRPNGGIKKFRSAAYS 96

Query: 64  NCVRKPS 71
           NC RKPS
Sbjct: 97  NCARKPS 103

[Close]
BLAST of Lsi11G007050 vs. NCBI nr
Match: TYJ96391.1 (S-adenosylmethionine decarboxylase proenzyme-like [Cucumis melo var. makuwa])

HSP 1 Score: 122.5 bits (306), Expect = 1.5e-24
Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 0 

Query: 7  RRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCV 66
          +RRSVDVVME KGGKKKS+SSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCV
Sbjct: 12 KRRSVDVVMETKGGKKKSNSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCV 71

Query: 67 RKPS 71
          RKPS
Sbjct: 72 RKPS 75

[Close]
BLAST of Lsi11G007050 vs. NCBI nr
Match: XP_038890197.1 (S-adenosylmethionine decarboxylase proenzyme-like [Benincasa hispida])

HSP 1 Score: 122.5 bits (306), Expect = 1.5e-24
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 3   IEFDRRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAY 62
           I+ D RRSVDVVM+ +GGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAY
Sbjct: 104 IDEDFRRSVDVVMKTEGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAY 163

Query: 63  SNCVRKPS 71
           SNCVRKPS
Sbjct: 164 SNCVRKPS 171

[Close]
BLAST of Lsi11G007050 vs. NCBI nr
Match: KAG6599133.1 (hypothetical protein SDJN03_08911, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120.2 bits (300), Expect = 7.3e-24
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = 0 

Query: 3  IEFDRRRSVDVVMEAKGGKKKSSSSS-SKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAA 62
          I+ D RRSVDVVMEAKGGKKKSSSSS SKSSKRQQYEAPLGYIIEDVRPHGGI+KFRSAA
Sbjct: 23 IDEDFRRSVDVVMEAKGGKKKSSSSSCSKSSKRQQYEAPLGYIIEDVRPHGGIQKFRSAA 82

Query: 63 YSNCVRKPS 71
          YSNC+RKPS
Sbjct: 83 YSNCMRKPS 91

[Close]
BLAST of Lsi11G007050 vs. NCBI nr
Match: KAG7030075.1 (hypothetical protein SDJN02_08422, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 117.9 bits (294), Expect = 3.6e-23
Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 0 

Query: 8  RRSVDVVMEAKGGKKKSSSSS-SKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCV 67
          RRSVDVVMEAKGGKKKSSSSS SKSSKRQQYEAPLGYIIEDVRPHGGI+KFRSAAYSNC+
Sbjct: 12 RRSVDVVMEAKGGKKKSSSSSCSKSSKRQQYEAPLGYIIEDVRPHGGIQKFRSAAYSNCM 71

Query: 68 RKPS 71
          RKPS
Sbjct: 72 RKPS 75

[Close]
BLAST of Lsi11G007050 vs. NCBI nr
Match: KAG6586035.1 (hypothetical protein SDJN03_18768, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 112.1 bits (279), Expect = 2.0e-21
Identity = 57/63 (90.48%), Postives = 58/63 (92.06%), Query Frame = 0 

Query: 8  RRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVR 67
          RRSV+VVMEAK G KKS S SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVR
Sbjct: 10 RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVR 69

Query: 68 KPS 71
          KPS
Sbjct: 70 KPS 72

[Close]
BLAST of Lsi11G007050 vs. TAIR 10
Match: AT3G02468.1 (conserved peptide upstream open reading frame 9 )

HSP 1 Score: 77.0 bits (188), Expect = 6.6e-15
Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = 0 

Query: 14 VMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 71
          +ME+KGGKKKSSSSSS       YEAPLGY IEDVRP+GGI+KF+S+ YSNC ++PS
Sbjct: 1  MMESKGGKKKSSSSSSLF-----YEAPLGYSIEDVRPNGGIKKFKSSVYSNCSKRPS 52

[Close]
BLAST of Lsi11G007050 vs. TAIR 10
Match: AT3G25572.1 (conserved peptide upstream open reading frame 11 )

HSP 1 Score: 73.6 bits (179), Expect = 7.3e-14
Identity = 40/56 (71.43%), Postives = 45/56 (80.36%), Query Frame = 0 

Query: 15 MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 71
          ME KGGKKKSS+SSS+ S    +EAPL Y IEDVRP+GGI+KFRSAAYSN   KPS
Sbjct: 1  METKGGKKKSSNSSSRDS--LFFEAPLRYSIEDVRPNGGIKKFRSAAYSNITGKPS 54

[Close]
BLAST of Lsi11G007050 vs. TAIR 10
Match: AT5G15948.1 (conserved peptide upstream open reading frame 10 )

HSP 1 Score: 71.6 bits (174), Expect = 2.8e-13
Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 0 

Query: 15 MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS 71
          ME+K G KKSSS+SS       YEAPLGY IEDVRP GGI+KF+S+ YSNC ++PS
Sbjct: 1  MESKAGNKKSSSNSSLC-----YEAPLGYSIEDVRPFGGIKKFKSSVYSNCAKRPS 51

The following BLAST results are available for this feature:
BLAST of Lsi11G007050 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi11G007050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BCP37.1e-2595.31S-adenosylmethionine decarboxylase proenzyme-like OS=Cucumis melo var. makuwa OX... [more]
A0A1S3BUN94.8e-2196.43Adenosylmethionine decarboxylase OS=Cucumis melo OX=3656 GN=LOC103493485 PE=3 SV... [more]
A0A0A0LM835.3e-2096.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036690 PE=4 SV=1[more]
A5BJ641.1e-1783.87Reverse transcriptase Ty1/copia-type domain-containing protein OS=Vitis vinifera... [more]
A0A7J0HEL39.3e-1773.13Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_29g0007080 PE=4 SV=1[more]
BLAST of Lsi11G007050 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ96391.11.5e-2495.31S-adenosylmethionine decarboxylase proenzyme-like [Cucumis melo var. makuwa][more]
XP_038890197.11.5e-2491.18S-adenosylmethionine decarboxylase proenzyme-like [Benincasa hispida][more]
KAG6599133.17.3e-2491.30hypothetical protein SDJN03_08911, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7030075.13.6e-2395.31hypothetical protein SDJN02_08422, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6586035.12.0e-2190.48hypothetical protein SDJN03_18768, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Lsi11G007050 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G02468.16.6e-1568.42conserved peptide upstream open reading frame 9 [more]
AT3G25572.17.3e-1471.43conserved peptide upstream open reading frame 11 [more]
AT5G15948.12.8e-1364.29conserved peptide upstream open reading frame 10 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012511S-adenosyl-l-methionine decarboxylase leader peptidePFAMPF08132AdoMetDC_leadercoord: 15..70
e-value: 6.4E-30
score: 102.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..36
NoneNo IPR availablePANTHERPTHR35727BNAA05G33520D PROTEINcoord: 15..70
NoneNo IPR availablePANTHERPTHR35727:SF2SUBFAMILY NOT NAMEDcoord: 15..70

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G007050.1Lsi11G007050.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006557 S-adenosylmethioninamine biosynthetic process
biological_process GO:0008295 spermidine biosynthetic process
biological_process GO:0006597 spermine biosynthetic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004014 adenosylmethionine decarboxylase activity