Lsi11G006990 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G006990
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ATP-dependent DNA helicase
Location	chr11: 7410869 .. 7412204 (-)
RNA-Seq Expression	Lsi11G006990
Synteny	Lsi11G006990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGGTAGCCCTGTAACAAATATCATGTATAGCTTGTAGGCTTAAATGGATCTTTTGCTTTCAAAAGGAATACATACAGGAAATAGGTTTTTTGTGGAGAATTTAGCATGTTTTTTCCATGCCATATTTCTGTTGATTATGTGTACTGTCATGGTTGAATGATATGTTCATCCTATTTAATTTAAAGGACAAAAGGAAAGCATGTCGTTTAGACTTTTTAGTTCATGAATTCTTGGTGCAAAATCGTGCCACATGTAAAATGTCCTGTGAGTCCAAAAAAATCACATGGTGTCATTTGTCAACATCATGAGTTCAATGGTTGATATTCCTTGTTATCGATATATCTTGGTAATTTTTTCCTGGAATCTTAGAGTTGTATTCTTTTCAAGGATTAATCATCAGGAATTAGTCAAACGTTTGTTTGTATCCAAAATATCTGTGCTGTTCCTTCATTATAAATAAAAGATGGAATATTGTGCAGCCGAAGCGAGTGCAAATTTTGAAGTTGGTAGCTCTAGAAGCCCAAGGAACTGGGAACAAATGAAAGTGCCTGGGCTCCACCCGTCAATGTCGATGAGCGATCTCGTGAACCACATTGGACACTGTATTTCAGAGCAGATGACAGCGGCAAATCCATCATTTGCCAATGAAGGACCAGAATACCAGGACATACTAGAGGATATTGCACAGTATCTGCTGAATGACAACCAATCTACAACTTCTGATGAGAAATCTCTCATGAAAAGAGTCAATTCTCTCTGTTGTCTCTTGCAGAAAGATCCAACCAATTCCACAACTCAGAACTCACTGTTCAATGAAAGTCATGGCGAAGGACCCGATGGTAGGAAGAACGATAAAGTCAGTAGCATATTGAGGGGCGATGTCAAAGCTTTTGCAGAGGACGTAAAAGATAACTCAGGTACTAAGCAGGCAGTCGGTATGTCTAGGAAGGATTCGTTCGGTGAACTGCTGTTGCATCTTCCTCGAATCACTTCTATCCCGAAGTTTTTGTTCAACATCTCAGAAGAAGATGGTGAAAGTTGAAGTGTAGCTGAAATGTTTCTTCTGTACATTGCTTCAGAAATCGGCATCAGGACGGTTTAAAAGCAGATGAGAAAATCTTCATGGGATTCTGAAATATATATTGATGAAGAATCCTCTGTATGTGTAATCCATGTATTTAGGCAATTTATGTATGTCTAGAGCTGTTTTAATTCTTTCCCCTGTAATGTTATGAGACAAGCCCACCTTACATAAGTTGTAAATGGAATATCCTTTGGTGAATCAATCTATTAAATTAGAGTTTATACATCTTGAAACAAAATTAGCTATG

mRNA sequence

ATGATGGGTAGCCCTGACAAAAGGAAAGCATGTCGTTTAGACTTTTTAGTTCATGAATTCTTGGTGCAAAATCGTGCCACATGTAAAATGTCCTCCGAAGCGAGTGCAAATTTTGAAGTTGGTAGCTCTAGAAGCCCAAGGAACTGGGAACAAATGAAAGTGCCTGGGCTCCACCCGTCAATGTCGATGAGCGATCTCGTGAACCACATTGGACACTGTATTTCAGAGCAGATGACAGCGGCAAATCCATCATTTGCCAATGAAGGACCAGAATACCAGGACATACTAGAGGATATTGCACAGTATCTGCTGAATGACAACCAATCTACAACTTCTGATGAGAAATCTCTCATGAAAAGAGTCAATTCTCTCTGTTGTCTCTTGCAGAAAGATCCAACCAATTCCACAACTCAGAACTCACTGTTCAATGAAAGTCATGGCGAAGGACCCGATGGTAGGAAGAACGATAAAGTCAGTAGCATATTGAGGGGCGATGTCAAAGCTTTTGCAGAGGACGTAAAAGATAACTCAGGTACTAAGCAGGCAGTCGGTATGTCTAGGAAGGATTCGTTCGGTGAACTGCTGTTGCATCTTCCTCGAATCACTTCTATCCCGAAGTTTTTGTTCAACATCTCAGAAGAAGATGGTGAAAGTTGAAGTGTAGCTGAAATGTTTCTTCTGTACATTGCTTCAGAAATCGGCATCAGGACGGTTTAAAAGCAGATGAGAAAATCTTCATGGGATTCTGAAATATATATTGATGAAGAATCCTCTGTATGTGTAATCCATGTATTTAGGCAATTTATGTATGTCTAGAGCTGTTTTAATTCTTTCCCCTGTAATGTTATGAGACAAGCCCACCTTACATAAGTTGTAAATGGAATATCCTTTGGTGAATCAATCTATTAAATTAGAGTTTATACATCTTGAAACAAAATTAGCTATG

Coding sequence (CDS)

ATGATGGGTAGCCCTGACAAAAGGAAAGCATGTCGTTTAGACTTTTTAGTTCATGAATTCTTGGTGCAAAATCGTGCCACATGTAAAATGTCCTCCGAAGCGAGTGCAAATTTTGAAGTTGGTAGCTCTAGAAGCCCAAGGAACTGGGAACAAATGAAAGTGCCTGGGCTCCACCCGTCAATGTCGATGAGCGATCTCGTGAACCACATTGGACACTGTATTTCAGAGCAGATGACAGCGGCAAATCCATCATTTGCCAATGAAGGACCAGAATACCAGGACATACTAGAGGATATTGCACAGTATCTGCTGAATGACAACCAATCTACAACTTCTGATGAGAAATCTCTCATGAAAAGAGTCAATTCTCTCTGTTGTCTCTTGCAGAAAGATCCAACCAATTCCACAACTCAGAACTCACTGTTCAATGAAAGTCATGGCGAAGGACCCGATGGTAGGAAGAACGATAAAGTCAGTAGCATATTGAGGGGCGATGTCAAAGCTTTTGCAGAGGACGTAAAAGATAACTCAGGTACTAAGCAGGCAGTCGGTATGTCTAGGAAGGATTCGTTCGGTGAACTGCTGTTGCATCTTCCTCGAATCACTTCTATCCCGAAGTTTTTGTTCAACATCTCAGAAGAAGATGGTGAAAGTTGA

Protein sequence

MMGSPDKRKACRLDFLVHEFLVQNRATCKMSSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFNESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES

Homology

[Close]

BLAST of Lsi11G006990 vs. ExPASy TrEMBL
Match: A0A1S3BUS8 (uncharacterized protein LOC103493516 OS=Cucumis melo OX=3656 GN=LOC103493516 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.0e-94
Identity = 177/189 (93.65%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 31  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGP 90
           S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFAN+GP
Sbjct: 344 SAEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANQGP 403

Query: 91  EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFN-ESHGEG 150
           EYQDILEDI QYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTN TTQNSLFN ES GEG
Sbjct: 404 EYQDILEDITQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNPTTQNSLFNDESRGEG 463

Query: 151 PDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLF 210
           PDGRKNDKV +ILRGD+KAF EDVKDNSGTKQAVGMSRKDSFGELLLHLPRI SIPKFLF
Sbjct: 464 PDGRKNDKVGNILRGDIKAFGEDVKDNSGTKQAVGMSRKDSFGELLLHLPRIASIPKFLF 523

Query: 211 NISEEDGES 219
           NISEED ES
Sbjct: 524 NISEEDSES 532

[Close]

BLAST of Lsi11G006990 vs. ExPASy TrEMBL
Match: A0A0A0LM78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036640 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 7.2e-92
Identity = 175/189 (92.59%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 31  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGP 90
           S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAAN SFAN+GP
Sbjct: 344 SAEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANSSFANQGP 403

Query: 91  EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFN-ESHGEG 150
           EYQDILEDI QYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDP N TTQNSLFN ES  EG
Sbjct: 404 EYQDILEDITQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPANPTTQNSLFNDESRVEG 463

Query: 151 PDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLF 210
           PD RKNDKV +ILRGDVKAF EDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLF
Sbjct: 464 PDSRKNDKVGNILRGDVKAFGEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLF 523

Query: 211 NISEEDGES 219
           NISEED ES
Sbjct: 524 NISEEDSES 532

[Close]

BLAST of Lsi11G006990 vs. ExPASy TrEMBL
Match: A0A6J1DVC2 (uncharacterized protein LOC111024711 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024711 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 8.0e-91
Identity = 172/189 (91.01%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 31  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGP 90
           S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCI+EQMTAANPSFAN+GP
Sbjct: 345 SAEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCITEQMTAANPSFANQGP 404

Query: 91  EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFN-ESHGEG 150
           EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKD TN+TTQNSLFN ES GEG
Sbjct: 405 EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDTTNTTTQNSLFNDESRGEG 464

Query: 151 PDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLF 210
           P+ RKNDKVS+ILRGDVKAF +DVKD+SGTKQAVGM+RKDSFGELLL LPRI SIPKFLF
Sbjct: 465 PNDRKNDKVSNILRGDVKAFTDDVKDSSGTKQAVGMTRKDSFGELLLQLPRIASIPKFLF 524

Query: 211 NISEEDGES 219
           NISEED ES
Sbjct: 525 NISEEDSES 533

[Close]

BLAST of Lsi11G006990 vs. ExPASy TrEMBL
Match: A0A6J1DWI1 (uncharacterized protein LOC111024711 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024711 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 8.0e-91
Identity = 172/189 (91.01%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 31  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGP 90
           S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCI+EQMTAANPSFAN+GP
Sbjct: 346 SAEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCITEQMTAANPSFANQGP 405

Query: 91  EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFN-ESHGEG 150
           EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKD TN+TTQNSLFN ES GEG
Sbjct: 406 EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDTTNTTTQNSLFNDESRGEG 465

Query: 151 PDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLF 210
           P+ RKNDKVS+ILRGDVKAF +DVKD+SGTKQAVGM+RKDSFGELLL LPRI SIPKFLF
Sbjct: 466 PNDRKNDKVSNILRGDVKAFTDDVKDSSGTKQAVGMTRKDSFGELLLQLPRIASIPKFLF 525

Query: 211 NISEEDGES 219
           NISEED ES
Sbjct: 526 NISEEDSES 534

[Close]

BLAST of Lsi11G006990 vs. ExPASy TrEMBL
Match: A0A6J1DYL5 (uncharacterized protein LOC111024711 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111024711 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 8.0e-91
Identity = 172/189 (91.01%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 31  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGP 90
           S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCI+EQMTAANPSFAN+GP
Sbjct: 344 SAEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCITEQMTAANPSFANQGP 403

Query: 91  EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFN-ESHGEG 150
           EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKD TN+TTQNSLFN ES GEG
Sbjct: 404 EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDTTNTTTQNSLFNDESRGEG 463

Query: 151 PDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLF 210
           P+ RKNDKVS+ILRGDVKAF +DVKD+SGTKQAVGM+RKDSFGELLL LPRI SIPKFLF
Sbjct: 464 PNDRKNDKVSNILRGDVKAFTDDVKDSSGTKQAVGMTRKDSFGELLLQLPRIASIPKFLF 523

Query: 211 NISEEDGES 219
           NISEED ES
Sbjct: 524 NISEEDSES 532

[Close]

BLAST of Lsi11G006990 vs. NCBI nr
Match: XP_008452508.1 (PREDICTED: uncharacterized protein LOC103493516 [Cucumis melo])

HSP 1 Score: 355.1 bits (910), Expect = 4.2e-94
Identity = 177/189 (93.65%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 31  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGP 90
           S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFAN+GP
Sbjct: 344 SAEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANQGP 403

Query: 91  EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFN-ESHGEG 150
           EYQDILEDI QYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTN TTQNSLFN ES GEG
Sbjct: 404 EYQDILEDITQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNPTTQNSLFNDESRGEG 463

Query: 151 PDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLF 210
           PDGRKNDKV +ILRGD+KAF EDVKDNSGTKQAVGMSRKDSFGELLLHLPRI SIPKFLF
Sbjct: 464 PDGRKNDKVGNILRGDIKAFGEDVKDNSGTKQAVGMSRKDSFGELLLHLPRIASIPKFLF 523

Query: 211 NISEEDGES 219
           NISEED ES
Sbjct: 524 NISEEDSES 532

[Close]

BLAST of Lsi11G006990 vs. NCBI nr
Match: XP_038890658.1 (uncharacterized protein LOC120080162 [Benincasa hispida])

HSP 1 Score: 351.7 bits (901), Expect = 4.6e-93
Identity = 178/190 (93.68%), Postives = 184/190 (96.84%), Query Frame = 0


Query: 31  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGP 90
           S+EASANFEVGSSRSPRNWEQ+KVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFAN+GP
Sbjct: 344 SAEASANFEVGSSRSPRNWEQIKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANQGP 403

Query: 91  EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTN-STTQNSLFNE-SHGE 150
           EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTN +TTQNSLFN+ S GE
Sbjct: 404 EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNTTTTQNSLFNDGSRGE 463

Query: 151 GPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFL 210
           GPDGRKNDKV + LRGDVKAFAEDVKDNSGTKQA GMSRKDSFGELLLHLPRITSIPKFL
Sbjct: 464 GPDGRKNDKVGNTLRGDVKAFAEDVKDNSGTKQAGGMSRKDSFGELLLHLPRITSIPKFL 523

Query: 211 FNISEEDGES 219
           FNISEEDGES
Sbjct: 524 FNISEEDGES 533

[Close]

BLAST of Lsi11G006990 vs. NCBI nr
Match: XP_004144718.1 (uncharacterized protein LOC101216574 [Cucumis sativus] >KGN61066.1 hypothetical protein Csa_021203 [Cucumis sativus])

HSP 1 Score: 346.7 bits (888), Expect = 1.5e-91
Identity = 175/189 (92.59%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 31  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGP 90
           S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAAN SFAN+GP
Sbjct: 344 SAEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANSSFANQGP 403

Query: 91  EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFN-ESHGEG 150
           EYQDILEDI QYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDP N TTQNSLFN ES  EG
Sbjct: 404 EYQDILEDITQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPANPTTQNSLFNDESRVEG 463

Query: 151 PDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLF 210
           PD RKNDKV +ILRGDVKAF EDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLF
Sbjct: 464 PDSRKNDKVGNILRGDVKAFGEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLF 523

Query: 211 NISEEDGES 219
           NISEED ES
Sbjct: 524 NISEEDSES 532

[Close]

BLAST of Lsi11G006990 vs. NCBI nr
Match: XP_022158168.1 (uncharacterized protein LOC111024711 isoform X2 [Momordica charantia])

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-90
Identity = 172/189 (91.01%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 31  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGP 90
           S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCI+EQMTAANPSFAN+GP
Sbjct: 345 SAEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCITEQMTAANPSFANQGP 404

Query: 91  EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFN-ESHGEG 150
           EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKD TN+TTQNSLFN ES GEG
Sbjct: 405 EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDTTNTTTQNSLFNDESRGEG 464

Query: 151 PDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLF 210
           P+ RKNDKVS+ILRGDVKAF +DVKD+SGTKQAVGM+RKDSFGELLL LPRI SIPKFLF
Sbjct: 465 PNDRKNDKVSNILRGDVKAFTDDVKDSSGTKQAVGMTRKDSFGELLLQLPRIASIPKFLF 524

Query: 211 NISEEDGES 219
           NISEED ES
Sbjct: 525 NISEEDSES 533

[Close]

BLAST of Lsi11G006990 vs. NCBI nr
Match: XP_022158167.1 (uncharacterized protein LOC111024711 isoform X1 [Momordica charantia])

HSP 1 Score: 343.2 bits (879), Expect = 1.6e-90
Identity = 172/189 (91.01%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 31  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGP 90
           S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCI+EQMTAANPSFAN+GP
Sbjct: 346 SAEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCITEQMTAANPSFANQGP 405

Query: 91  EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFN-ESHGEG 150
           EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKD TN+TTQNSLFN ES GEG
Sbjct: 406 EYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQKDTTNTTTQNSLFNDESRGEG 465

Query: 151 PDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLF 210
           P+ RKNDKVS+ILRGDVKAF +DVKD+SGTKQAVGM+RKDSFGELLL LPRI SIPKFLF
Sbjct: 466 PNDRKNDKVSNILRGDVKAFTDDVKDSSGTKQAVGMTRKDSFGELLLQLPRIASIPKFLF 525

Query: 211 NISEEDGES 219
           NISEED ES
Sbjct: 526 NISEEDSES 534

[Close]

BLAST of Lsi11G006990 vs. TAIR 10
Match: AT4G30780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24100.1); Has 109 Blast hits to 109 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 1.7e-24
Identity = 77/180 (42.78%), Postives = 98/180 (54.44%), Query Frame = 0


Query: 40  VGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDI 99
           +  SR+  + +Q+KVPGLH SMS+SD V  +           + S     PE+ +  E +
Sbjct: 422 LSDSRNITDSDQIKVPGLHQSMSVSDFVGLL-----------SDSAGGSHPEHMEKFEIM 481

Query: 100 AQYLLNDN-QSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFNESHGEGPDGRKNDKV 159
            Q LL+DN Q    DEKSLM RVNSL  LL KDP  +   NS  N     G        V
Sbjct: 482 KQQLLSDNIQFEAPDEKSLMPRVNSLFNLLYKDP--NVAANSQLNTEMSVGLKSEPKGIV 541

Query: 160 SSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES 219
           S     +       V D + + +  GM RKDSF +LLLHLPRITS+PKFL NISEEDG++
Sbjct: 542 SD--NNNNNNNNNRVLDTASSSKPQGMLRKDSFSDLLLHLPRITSLPKFLSNISEEDGDA 586

[Close]

BLAST of Lsi11G006990 vs. TAIR 10
Match: AT2G24100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23
Identity = 73/174 (41.95%), Postives = 96/174 (55.17%), Query Frame = 0


Query: 43  SRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQY 102
           SR+   W Q+K+PGLH S+SM+D +      +S+Q    N  F           E++ Q 
Sbjct: 318 SRNTNGWSQIKMPGLHQSISMNDFLTF----LSDQACENNQEF-----------EEMKQL 377

Query: 103 LLNDN-QSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFNESHGEGPDGRKNDKVSSI 162
           LL+DN Q+  SDEKS+M +VNS C LLQ    NS       +     G D  ++     +
Sbjct: 378 LLSDNTQTDPSDEKSVMSKVNSFCNLLQ-SAANSQLNIETADTERVVGVDNNRH-----M 437

Query: 163 LRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEED 216
             G  +     V   S +K   GMSRKDSF +LL+HLPRITS+PKFLFNISEED
Sbjct: 438 PEGGKRV----VDPASSSKPLQGMSRKDSFSDLLVHLPRITSLPKFLFNISEED 466

The following BLAST results are available for this feature:

BLAST of Lsi11G006990 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi11G006990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BUS8	2.0e-94	93.65	uncharacterized protein LOC103493516 OS=Cucumis melo OX=3656 GN=LOC103493516 PE=...	[more]
A0A0A0LM78	7.2e-92	92.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036640 PE=4 SV=1	[more]
A0A6J1DVC2	8.0e-91	91.01	uncharacterized protein LOC111024711 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DWI1	8.0e-91	91.01	uncharacterized protein LOC111024711 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DYL5	8.0e-91	91.01	uncharacterized protein LOC111024711 isoform X3 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Lsi11G006990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452508.1	4.2e-94	93.65	PREDICTED: uncharacterized protein LOC103493516 [Cucumis melo]	[more]
XP_038890658.1	4.6e-93	93.68	uncharacterized protein LOC120080162 [Benincasa hispida]	[more]
XP_004144718.1	1.5e-91	92.59	uncharacterized protein LOC101216574 [Cucumis sativus] >KGN61066.1 hypothetical ...	[more]
XP_022158168.1	1.6e-90	91.01	uncharacterized protein LOC111024711 isoform X2 [Momordica charantia]	[more]
XP_022158167.1	1.6e-90	91.01	uncharacterized protein LOC111024711 isoform X1 [Momordica charantia]	[more]

BLAST of Lsi11G006990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30780.1	1.7e-24	42.78	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24100.1	1.4e-23	41.95	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..157
None	No IPR available	PANTHER	PTHR33494	OS02G0793800 PROTEIN	coord: 37..216
None	No IPR available	PANTHER	PTHR33494:SF19	ATP-DEPENDENT DNA HELICASE	coord: 37..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G006990.1	Lsi11G006990.1	mRNA