Lsi11G006730 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G006730
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Loricrin
Location	chr11: 7082666 .. 7085285 (-)
RNA-Seq Expression	Lsi11G006730
Synteny	Lsi11G006730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATACAGAAAATCAGGTTGTCAGTGATTACCTTTCTTTGAACAAAAGGCCAAAAAATAAAATCATCCAGACATGCCCATCACTCTTCAATCCACCAAATTGGCGCCACCTGCCTCTGTTCATCCAAGACCCACATCACTTGGAAGTTTAAATTTCTAGATTTCTCAAACAAATTACCCTTCTGATTCTGATTCTCACTGTAAACAAAAAAAACCAAACACAACCCAATTTGTTCTTCAATTCAATTCAATTCAATTCAATCCAATCCGATTCCATCCCAAATCCCTGTTTTCTTCACCCTTTTCTACTTGTTTTTTAGTTTGGGAATTTACATATATATATGTTGGAATCAGGACATGCTGAGAATAATATCTCAGATGTTGGTTGCAGTGGTGTTAATGACGATGGCGATGATGAAGATGACGAGACTCGTAAAACTATGGCGAAGACCCAAATCGGGGATGATGAGTTTGATGATGATCGAAAAATGGAGATTGGTAAAAAGGGTTTTGGGAAGGCGAAACAGGTGATGTTCTATCCATTTCGAAAGGCGAAGAAACAAATTCTTCGGCGGAGGATTAAGAGGGCTTCTTCTTCTTCTTCTTCTTCTTGTTCGCCCTCTTCTTCTTCTGTTACTTGTACTAGAAGAACAAATTCTTCGGATAAGAGGGGTTTTGATGGGAGTGTTAATCAGGGTTGTGGTTTCTGTTTTACCAAACTTTCAATTTCAGATTCTAAGAATGGGTCTCCAACTGACCCTAATCACCGGAAGTTCACTTATGAAATGTTGAAAGTTCTTATTGAGAAGAATGATTTCTATTCCAAAGAATCCAATCCTCACTTGGGTATTCATCTATCCTCTTGTTAGTTCAACTAATCGTTTCTACTTGTTTGGAGTTTGATTATATTGTTGTGGTTTTGTGGTTTTTGTTTGTCAGATGTTCAAGTGGACACTAGACAGAAACATTAAATTCAATTGGTTTTTGCTTGTTGAGGTATGTTACCAGTGTTATCCATGGAGTGATAGATTTGATCAACCTTTTTTTTTTTTTTGTTTATGTTTTTCCTATCTTCTCTTGTTTGCTAAGCAAATGAGAGAAATTTATTATTTGGCGAGACTGTGGCATTCTGTTTGGTTTATTTTATTGTAGCCTATTGATGTAAGTTCATAGTTGGAACACCTACTCCAAAGGAATATATTGACCACATTAATTTTTACCGAGAATCAATATTTACATTCCACACTTCTTTCATTTGGAAATCCACTATGAGTTCTATGGTCATTGAATGAGTCTTACATTTTTTGTTCTCTCCCGGATGAACTCGATAATTGTATTTTGTGTTCCATATCTTTAATGTTTTCAATGGATTGATAGACTTGATCGACTTTTCCCCCCCATCTCTTCTTTGCCATGTTAATAAGAAAAGTTCAGTATTTGGTGGGACTGGAATTCTGTTTGGTTTATTAGACAGTAGCCTATTGATGTATGTTGATAGTTGGAATAAATACTCCAAAGGAATATTTTGACCAAATTAACTTTACCAAGCATCAATATTTACCTTCCTCACTTTTGGCATTTAAAAATCCAGTGTGAGTTCTATGGTTATTGAAGGAGATTTACTTGTTTTGTTGCCACCTGGATGACCAATGATTTTATGTGTACAATATCCTTAATGTTTTGAATCAAGTAGCATTAATGGTGAATGATCAGAGCGAGAGGCTTTCTATATATGAACAGCTATAGTGTTACCCAGGAGCAGAGCAGGTTGTTGAATTTTGAACTGCGTGCATTTCATTTATGTTTTAATTGTAACACTCTTTGCTTATCTACCGAAATTTATATTATTCTGCACTTGAATCTCTTTTTCTATATGTACGCAAATCAAGACTTTTGTATCCAAAAAAATTATCTCTGTTCTTCTTCATTCCTCTGTCTTGGGTCATGTAAGTTAAGTTATCTAGAAACTTTGACAGTGGTACTTATTGTGGATCTTAAACCAAAACACACATGTATATTGCTTTCTGTCTTCTCTTCCTTGCTCTATTAAATTCTTCACTCAATTTGTTTCAAGTTTCCAAGAAGCCTCATTTGCATTCGTTGCTATGTGATCAAATGCATGCAAATTTAATTCAAGCGGCTAGCCTTAACCATCCCTTTTCCCTTGTTCATTCAACTAGCGACCAAGAAGTTATGGTGGAGGATGAAGTTGATGATTTCGATGAGGCCATTGCTAATGTTTGTAACATTGGTTCAGAAAATCTGCATACTGATGAGAAGATGGAGATTTTTCTGGAGATCGTCATTGTTCTTTTGTTTGATGATAAACAATTTGGATTAGAGTTCCCTCCCTCTTTCGAAGCTATTTCTATGAAGCCATGGACTTATTCGGGTCTCTCTAAGTCAAGTTTGTTGTCCTGCTTTCATTCTCCCTTCACTAAGGAAGATCTCTTTCAATATGGTGCAGAAACCAAGATTACTTTTTATGAGATTAAGCCTAAAAATTAGGTTTGGTTTTATGAAGGGTTTTATTGCAATTGTTGGTTTTCGGCTGCCAAGTCATTTTGTGGGCTGGAGTTTTCTTTTGATAGCCTCGTTGGTGGTCTTTCTGCTTTTGAACGT

mRNA sequence

GATACAGAAAATCAGGTTGTCAGTGATTACCTTTCTTTGAACAAAAGGCCAAAAAATAAAATCATCCAGACATGCCCATCACTCTTCAATCCACCAAATTGGCGCCACCTGCCTCTGTTCATCCAAGACCCACATCACTTGGAAGTTTAAATTTCTAGATTTCTCAAACAAATTACCCTTCTGATTCTGATTCTCACTGTAAACAAAAAAAACCAAACACAACCCAATTTGTTCTTCAATTCAATTCAATTCAATTCAATCCAATCCGATTCCATCCCAAATCCCTGTTTTCTTCACCCTTTTCTACTTGTTTTTTAGTTTGGGAATTTACATATATATATGTTGGAATCAGGACATGCTGAGAATAATATCTCAGATGTTGGTTGCAGTGGTGTTAATGACGATGGCGATGATGAAGATGACGAGACTCGTAAAACTATGGCGAAGACCCAAATCGGGGATGATGAGTTTGATGATGATCGAAAAATGGAGATTGGTAAAAAGGGTTTTGGGAAGGCGAAACAGGTGATGTTCTATCCATTTCGAAAGGCGAAGAAACAAATTCTTCGGCGGAGGATTAAGAGGGCTTCTTCTTCTTCTTCTTCTTCTTGTTCGCCCTCTTCTTCTTCTGTTACTTGTACTAGAAGAACAAATTCTTCGGATAAGAGGGGTTTTGATGGGAGTGTTAATCAGGGTTGTGGTTTCTGTTTTACCAAACTTTCAATTTCAGATTCTAAGAATGGGTCTCCAACTGACCCTAATCACCGGAAGTTCACTTATGAAATGTTGAAAGTTCTTATTGAGAAGAATGATTTCTATTCCAAAGAATCCAATCCTCACTTGGTTTCCAAGAAGCCTCATTTGCATTCGTTGCTATGTGATCAAATGCATGCAAATTTAATTCAAGCGGCTAGCCTTAACCATCCCTTTTCCCTTGTTCATTCAACTAGCGACCAAGAAGTTATGGTGGAGGATGAAGTTGATGATTTCGATGAGGCCATTGCTAATGTTTGTAACATTGGTTCAGAAAATCTGCATACTGATGAGAAGATGGAGATTTTTCTGGAGATCGTCATTGTTCTTTTGTTTGATGATAAACAATTTGGATTAGAGTTCCCTCCCTCTTTCGAAGCTATTTCTATGAAGCCATGGACTTATTCGGGTCTCTCTAAGTCAAGGTTTTATTGCAATTGTTGGTTTTCGGCTGCCAAGTCATTTTGTGGGCTGGAGTTTTCTTTTGATAGCCTCGTTGGTGGTCTTTCTGCTTTTGAACGT

Coding sequence (CDS)

ATGTTGGAATCAGGACATGCTGAGAATAATATCTCAGATGTTGGTTGCAGTGGTGTTAATGACGATGGCGATGATGAAGATGACGAGACTCGTAAAACTATGGCGAAGACCCAAATCGGGGATGATGAGTTTGATGATGATCGAAAAATGGAGATTGGTAAAAAGGGTTTTGGGAAGGCGAAACAGGTGATGTTCTATCCATTTCGAAAGGCGAAGAAACAAATTCTTCGGCGGAGGATTAAGAGGGCTTCTTCTTCTTCTTCTTCTTCTTGTTCGCCCTCTTCTTCTTCTGTTACTTGTACTAGAAGAACAAATTCTTCGGATAAGAGGGGTTTTGATGGGAGTGTTAATCAGGGTTGTGGTTTCTGTTTTACCAAACTTTCAATTTCAGATTCTAAGAATGGGTCTCCAACTGACCCTAATCACCGGAAGTTCACTTATGAAATGTTGAAAGTTCTTATTGAGAAGAATGATTTCTATTCCAAAGAATCCAATCCTCACTTGGTTTCCAAGAAGCCTCATTTGCATTCGTTGCTATGTGATCAAATGCATGCAAATTTAATTCAAGCGGCTAGCCTTAACCATCCCTTTTCCCTTGTTCATTCAACTAGCGACCAAGAAGTTATGGTGGAGGATGAAGTTGATGATTTCGATGAGGCCATTGCTAATGTTTGTAACATTGGTTCAGAAAATCTGCATACTGATGAGAAGATGGAGATTTTTCTGGAGATCGTCATTGTTCTTTTGTTTGATGATAAACAATTTGGATTAGAGTTCCCTCCCTCTTTCGAAGCTATTTCTATGAAGCCATGGACTTATTCGGGTCTCTCTAAGTCAAGGTTTTATTGCAATTGTTGGTTTTCGGCTGCCAAGTCATTTTGTGGGCTGGAGTTTTCTTTTGATAGCCTCGTTGGTGGTCTTTCTGCTTTTGAACGT

Protein sequence

MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTCTRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHLVSKKPHLHSLLCDQMHANLIQAASLNHPFSLVHSTSDQEVMVEDEVDDFDEAIANVCNIGSENLHTDEKMEIFLEIVIVLLFDDKQFGLEFPPSFEAISMKPWTYSGLSKSRFYCNCWFSAAKSFCGLEFSFDSLVGGLSAFER

Homology

[Close]

BLAST of Lsi11G006730 vs. ExPASy TrEMBL
Match: A0A1S3BWA1 (uncharacterized protein LOC103493824 OS=Cucumis melo OX=3656 GN=LOC103493824 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.0e-75
Identity = 155/169 (91.72%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKA 60
           MLES HAENNISDVGCSGVNDDGDDEDDETR TMAKTQI DDEFDDDRKME+GKKGFGKA
Sbjct: 1   MLESRHAENNISDVGCSGVNDDGDDEDDETRNTMAKTQIRDDEFDDDRKMEMGKKGFGKA 60

Query: 61  KQVMFYPFRKAKKQILRRRIKRASS-SSSSSCSPSSSSVTCTRRTNSSDKRGFDGSVNQG 120
           KQVMFYPFRKAKKQILRRRIKR SS SSSS CS SS SV C+RRTNS DKRGFDGSVNQG
Sbjct: 61  KQVMFYPFRKAKKQILRRRIKRGSSCSSSSPCSSSSPSVICSRRTNSLDKRGFDGSVNQG 120

Query: 121 CGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL 169
           CGFC TKLSISDSKNGSPTDPNHRKFT EMLKVLIEKNDFYSKESNPHL
Sbjct: 121 CGFCLTKLSISDSKNGSPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHL 169

[Close]

BLAST of Lsi11G006730 vs. ExPASy TrEMBL
Match: A0A0A0LH19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035380 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 8.8e-75
Identity = 152/167 (91.02%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKA 60
           MLES HAENNISDVGCSGVNDDGDDEDDETR TMAKTQI DDEFDDDRKME+GKKGFGKA
Sbjct: 1   MLESRHAENNISDVGCSGVNDDGDDEDDETRNTMAKTQIRDDEFDDDRKMEMGKKGFGKA 60

Query: 61  KQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTCTRRTNSSDKRGFDGSVNQGC 120
           KQVMFYPFRKAKKQILRRRIKR      SSCS SSSSVTC+RRTNS DKRGFDGSVNQGC
Sbjct: 61  KQVMFYPFRKAKKQILRRRIKR-----DSSCSSSSSSVTCSRRTNSLDKRGFDGSVNQGC 120

Query: 121 GFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPH 168
           GFC TKLSISDSKNGSPTDPNHRKFT EMLKVLIEKNDFYSKESNPH
Sbjct: 121 GFCLTKLSISDSKNGSPTDPNHRKFTNEMLKVLIEKNDFYSKESNPH 162

[Close]

BLAST of Lsi11G006730 vs. ExPASy TrEMBL
Match: A0A6J1KI22 (uncharacterized protein LOC111494022 OS=Cucurbita maxima OX=3661 GN=LOC111494022 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 6.8e-59
Identity = 134/169 (79.29%), Postives = 143/169 (84.62%), Query Frame = 0


Query: 1   MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGK-KGFGK 60
           MLESG+AEN++SDVGCSGVNDDGDDED+E RK+MAK QI           ++GK KGFGK
Sbjct: 1   MLESGNAENHLSDVGCSGVNDDGDDEDNERRKSMAKGQI--------IAPDLGKQKGFGK 60

Query: 61  AKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTCTRRTNSSDKRGFDGSVNQG 120
           AK+VM YPFRKAKKQILRRRIKR     SSSCS SSSSV CTRRT+SSDKR FDGSVNQG
Sbjct: 61  AKRVMLYPFRKAKKQILRRRIKR----DSSSCS-SSSSVDCTRRTSSSDKRVFDGSVNQG 120

Query: 121 CGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL 169
           CGFCF KLSISDSKNG PTDPNHRKFT EMLKVLIEKNDFYSKESNPHL
Sbjct: 121 CGFCFMKLSISDSKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHL 156

[Close]

BLAST of Lsi11G006730 vs. ExPASy TrEMBL
Match: A0A6J1G2R9 (uncharacterized protein LOC111450262 OS=Cucurbita moschata OX=3662 GN=LOC111450262 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 8.3e-57
Identity = 130/169 (76.92%), Postives = 139/169 (82.25%), Query Frame = 0


Query: 1   MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGK-KGFGK 60
           MLESG+AEN++SDVGCSGVNDD DDEDDE RK+MAK QI           ++GK KGFGK
Sbjct: 1   MLESGNAENHLSDVGCSGVNDDADDEDDERRKSMAKAQI--------IAPDLGKQKGFGK 60

Query: 61  AKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTCTRRTNSSDKRGFDGSVNQG 120
           AK+VM YPFRKAKKQILRRRIKR     SSSCS SSSSV C RRT+SSDK  FDGSVNQG
Sbjct: 61  AKRVMLYPFRKAKKQILRRRIKR----DSSSCS-SSSSVDCNRRTSSSDKMVFDGSVNQG 120

Query: 121 CGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL 169
           CGFCF KLSISD KNG PTDPNHRKFT +MLKVLIEKNDFYSKESNPHL
Sbjct: 121 CGFCFMKLSISDPKNGPPTDPNHRKFTNQMLKVLIEKNDFYSKESNPHL 156

[Close]

BLAST of Lsi11G006730 vs. ExPASy TrEMBL
Match: A0A6J1DRZ8 (uncharacterized protein LOC111023307 OS=Momordica charantia OX=3673 GN=LOC111023307 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.5e-53
Identity = 129/172 (75.00%), Postives = 136/172 (79.07%), Query Frame = 0


Query: 1   MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKA 60
           MLESGHAE N+SDVGCSGVNDD DDEDDET KTMA  QIG D  DDD K   GK+GFGKA
Sbjct: 1   MLESGHAE-NVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKA 60

Query: 61  KQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTCTRRTNSSDKRGFDGSVNQGC 120
           KQV+ YPFRKAKKQILRR+IKRA          SSSS T T RT SSDKR  DGSVNQGC
Sbjct: 61  KQVISYPFRKAKKQILRRKIKRA----------SSSSFTATSRTLSSDKRVVDGSVNQGC 120

Query: 121 GFCFTKLSISDSKNGS-PTDPNHRKFTYEMLKVLIEKNDFYSKESNPHLVSK 172
           GFCF +L ISDSKNGS  TDPN+RKFT EMLK+LIEKNDFYSKE NPHL SK
Sbjct: 121 GFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHLDSK 160

[Close]

BLAST of Lsi11G006730 vs. NCBI nr
Match: XP_008452984.1 (PREDICTED: uncharacterized protein LOC103493824 [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 2.1e-75
Identity = 155/169 (91.72%), Postives = 157/169 (92.90%), Query Frame = 0


Query: 1   MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKA 60
           MLES HAENNISDVGCSGVNDDGDDEDDETR TMAKTQI DDEFDDDRKME+GKKGFGKA
Sbjct: 1   MLESRHAENNISDVGCSGVNDDGDDEDDETRNTMAKTQIRDDEFDDDRKMEMGKKGFGKA 60

Query: 61  KQVMFYPFRKAKKQILRRRIKRASS-SSSSSCSPSSSSVTCTRRTNSSDKRGFDGSVNQG 120
           KQVMFYPFRKAKKQILRRRIKR SS SSSS CS SS SV C+RRTNS DKRGFDGSVNQG
Sbjct: 61  KQVMFYPFRKAKKQILRRRIKRGSSCSSSSPCSSSSPSVICSRRTNSLDKRGFDGSVNQG 120

Query: 121 CGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL 169
           CGFC TKLSISDSKNGSPTDPNHRKFT EMLKVLIEKNDFYSKESNPHL
Sbjct: 121 CGFCLTKLSISDSKNGSPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHL 169

[Close]

BLAST of Lsi11G006730 vs. NCBI nr
Match: XP_011648888.1 (uncharacterized protein LOC101216013 [Cucumis sativus] >XP_031736788.1 uncharacterized protein LOC101216013 [Cucumis sativus] >KGN61038.1 hypothetical protein Csa_021211 [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 1.8e-74
Identity = 152/167 (91.02%), Postives = 154/167 (92.22%), Query Frame = 0


Query: 1   MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKA 60
           MLES HAENNISDVGCSGVNDDGDDEDDETR TMAKTQI DDEFDDDRKME+GKKGFGKA
Sbjct: 1   MLESRHAENNISDVGCSGVNDDGDDEDDETRNTMAKTQIRDDEFDDDRKMEMGKKGFGKA 60

Query: 61  KQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTCTRRTNSSDKRGFDGSVNQGC 120
           KQVMFYPFRKAKKQILRRRIKR      SSCS SSSSVTC+RRTNS DKRGFDGSVNQGC
Sbjct: 61  KQVMFYPFRKAKKQILRRRIKR-----DSSCSSSSSSVTCSRRTNSLDKRGFDGSVNQGC 120

Query: 121 GFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPH 168
           GFC TKLSISDSKNGSPTDPNHRKFT EMLKVLIEKNDFYSKESNPH
Sbjct: 121 GFCLTKLSISDSKNGSPTDPNHRKFTNEMLKVLIEKNDFYSKESNPH 162

[Close]

BLAST of Lsi11G006730 vs. NCBI nr
Match: XP_038890967.1 (uncharacterized protein LOC120080390 [Benincasa hispida] >XP_038890968.1 uncharacterized protein LOC120080390 [Benincasa hispida] >XP_038890969.1 uncharacterized protein LOC120080390 [Benincasa hispida])

HSP 1 Score: 285.4 bits (729), Expect = 5.8e-73
Identity = 152/168 (90.48%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKA 60
           MLES HAENNISDVGCSG NDDGDDEDDETRKTMA TQI  DEFDDDRKME+GKKGFGKA
Sbjct: 1   MLESRHAENNISDVGCSGANDDGDDEDDETRKTMANTQIRHDEFDDDRKMEMGKKGFGKA 60

Query: 61  KQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTCTRRTNSSDKRGFDGSVNQGC 120
           KQVMFYPFRKAKKQILRRRIK    S+SSSC  SSSSVTCTR+TNSSDKRGFDGSVNQGC
Sbjct: 61  KQVMFYPFRKAKKQILRRRIK----SASSSC--SSSSVTCTRKTNSSDKRGFDGSVNQGC 120

Query: 121 GFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL 169
           GFCFTKLSISDSKNGSPTDPN+RKFT EMLKVLIEKNDFYSKESNPHL
Sbjct: 121 GFCFTKLSISDSKNGSPTDPNNRKFTNEMLKVLIEKNDFYSKESNPHL 162

[Close]

BLAST of Lsi11G006730 vs. NCBI nr
Match: XP_023545330.1 (uncharacterized protein LOC111804772 [Cucurbita pepo subsp. pepo] >XP_023545331.1 uncharacterized protein LOC111804772 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-59
Identity = 132/168 (78.57%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 1   MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKA 60
           MLESG+AEN++SDVGCSGVNDDGDDEDDE RK+MAK QI   +  +       +KGFGKA
Sbjct: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGE-------QKGFGKA 60

Query: 61  KQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTCTRRTNSSDKRGFDGSVNQGC 120
           K+VM YPFRKAKKQILRRRIKR     SSSCS SSSSV CTRRT+SSDKR FDGSVNQGC
Sbjct: 61  KRVMLYPFRKAKKQILRRRIKR----DSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGC 120

Query: 121 GFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL 169
           GFCF KLSISD KNG PTDPNHRKFT EMLKVLIEKNDFYSKESNPHL
Sbjct: 121 GFCFMKLSISDPKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHL 157

[Close]

BLAST of Lsi11G006730 vs. NCBI nr
Match: KAG6599154.1 (hypothetical protein SDJN03_08932, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 238.8 bits (608), Expect = 6.3e-59
Identity = 134/169 (79.29%), Postives = 143/169 (84.62%), Query Frame = 0


Query: 1   MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGK-KGFGK 60
           MLESG+AEN++SDVGCSGVNDDGDDEDDE RK+MAK QI           ++GK KGFGK
Sbjct: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQI--------IAPDLGKQKGFGK 60

Query: 61  AKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTCTRRTNSSDKRGFDGSVNQG 120
           AK+VM YPFRKAKKQILRRRIKR     SSSCS SSSSV CTRRT+SSDKR FDGSVNQG
Sbjct: 61  AKRVMLYPFRKAKKQILRRRIKR----DSSSCS-SSSSVDCTRRTSSSDKRVFDGSVNQG 120

Query: 121 CGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL 169
           CGFCF KLSISDSKNG PTDPNHRKF+ EMLKVLIEKNDFYSKESNPHL
Sbjct: 121 CGFCFMKLSISDSKNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHL 156

The following BLAST results are available for this feature:

BLAST of Lsi11G006730 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi11G006730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BWA1	1.0e-75	91.72	uncharacterized protein LOC103493824 OS=Cucumis melo OX=3656 GN=LOC103493824 PE=...	[more]
A0A0A0LH19	8.8e-75	91.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035380 PE=4 SV=1	[more]
A0A6J1KI22	6.8e-59	79.29	uncharacterized protein LOC111494022 OS=Cucurbita maxima OX=3661 GN=LOC111494022...	[more]
A0A6J1G2R9	8.3e-57	76.92	uncharacterized protein LOC111450262 OS=Cucurbita moschata OX=3662 GN=LOC1114502...	[more]
A0A6J1DRZ8	2.5e-53	75.00	uncharacterized protein LOC111023307 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Lsi11G006730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452984.1	2.1e-75	91.72	PREDICTED: uncharacterized protein LOC103493824 [Cucumis melo]	[more]
XP_011648888.1	1.8e-74	91.02	uncharacterized protein LOC101216013 [Cucumis sativus] >XP_031736788.1 uncharact...	[more]
XP_038890967.1	5.8e-73	90.48	uncharacterized protein LOC120080390 [Benincasa hispida] >XP_038890968.1 unchara...	[more]
XP_023545330.1	1.6e-59	78.57	uncharacterized protein LOC111804772 [Cucurbita pepo subsp. pepo] >XP_023545331....	[more]
KAG6599154.1	6.3e-59	79.29	hypothetical protein SDJN03_08932, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lsi11G006730 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..111
None	No IPR available	PANTHER	PTHR35123	OS07G0633900 PROTEIN-RELATED	coord: 7..169
None	No IPR available	PANTHER	PTHR35123:SF2	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE-LIKE PROTEIN	coord: 7..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G006730.1	Lsi11G006730.1	mRNA