Lsi11G006290 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi11G006290
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr11: 6667812 .. 6669722 (+)
RNA-Seq ExpressionLsi11G006290
SyntenyLsi11G006290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATGGTCCAGCCCTAACCATTTTCTCTCTGTTCTCGGAGAAATTCCGGTCGATGTCTTCCGAGTGAGAAACATGAACGTCATCATTCGCCTCTCGTCAGCGTCGATAATTTTCCCGGCGAAAATTGATCGCAAATACTTTTTCTCGACAACCCATCTTCCGTTCTGCGCTTACAATTCAACCTGTACGGCTCCCACAGCGAACGATTTCGACCCACTAATCATCTCAGACCTTATTTCCAGGCAACAATGGTCAAACCTCAAATCCCATTTAAAATTCAAAAGTCCCATCGATTTTCTTCACCAGTTGCTCGGTTCGGGAGCCGTCGACCCATTGCTTGTTCTCAGGTACTTCAATTGGTCCCAGAAAGAGCTTAAAGTTAATTACAACATCGAACTCCTTTGCAGACTCTTAATTTTATTGGCCAATGCTAAATGTTACCCCAAAATTCGATCATTTCTCGACTCTTTTGTAAAGGGTGAAACAAATTGCACGATTTCTTTGATTTTTCATACGCTTTCAGTGTGTAGCGACCAATTTTGTGCTAATTCGATAATTGCTGATATGTTGGTGTTAGCTTATGTGAAAAATTCGAAAACAGTTTTGGGATTGGAGGCATTTAAGAGAGCTGGTGATTACGGGTATAAGTTATCTGTGTTATCTTGTAACCCATTGTTGAGTTCCTTGGTGAAGGAGAATGAATTTGGGGATGTGGAATTTGTGTATAAAGAGATGATTAGAAGGAAAGTTAGTCCTAATTTGATTACATTTAATATTGTGATTAATGGGTTGTGTAAGGTCGGGAAATTGAATAAAGCTGGAGATGTTATTGATGATATGAAAGTATGGGGATTCTGGCCTAATGTGGTTACCTATAACACTCTCATTGATGGATACTGTAAAATAGGTAGGGTTGGGAAGATGTATAAAGCTGATGCTATTTTGAAGGAAATGGTGGCAAATAAAGTTAGCCCAAATGATGTTACTTTTAATATATTGATTGATGGGTTCTGTAAAGATGAAAACGTATCGGCTGCGTTGAAGGTGTTTGAGGAAATGCAGGGTCAGGGTCTGAAGCCTACCGTAGTAACATACAATTCCTTAATTAATGGTTTGTGCAATGAAGGTAAACTGAACGAGGGAAAAGTTTTGCTTGATGAAATGTTGAGTTCAAACTTGAAGCCTAATGTCATTACTTATAATGCCCTGATTAATGGGTATTGTAAGAAGAAGTTGTTGGAGGAAGCAAGGGAGTTGTTTGATAACATTGGAAAACAAGGGCTGGCTCCCAATGTTATAACATTCAATACATTACTTGATGGATATTGCAAGTGTGGAAAGATGGAAGAGGCTTTTTTGCTGCAGAATTTAATGTTAGAAAAAGGATTTCTCCCAGATGTCTCGACCTACAATTGCCTTATCGTTGGTTTTTGTAGGGAGGGAAAAATGGAGGAAGTCAAGAATCTTTTAAATGAAATGAAACGTAGAGGTCTGAAAGCGGATACAGTGACGTACAATATTTTGATAAGTGCATGGTGTGAGAAAAGGGAGCCGAAAAAGGCAGCGCGACTCATCGATGAGATGCTCGACAGGGGATTACAGCCAACTCATTTGACATATAACATTTTGTTGAATGGCCATTGTATGGAAGGAAACTTAAGGGCTGCTTTGAATGTGAGGAAGCAAATGGAGAAAGAAGGAAGATGGGCTAATGTGGTAACGTATAATGTGCTGATTCAAGGCTATTGTAGAAAGGGAAAATTGGAAGATGCAAATGGACTTCTTAATGAGATGCTGGAGAAGGGATTAATTCCGAATCGTACTACTTATGAGATAATTAAAGAGGAAATGATGGAGAAAGGATTTCTCCCTGATATAGAAGGTCATCTTTATCAAGTCTCCCGCTAG

mRNA sequence

ATGAAATGGTCCAGCCCTAACCATTTTCTCTCTGTTCTCGGAGAAATTCCGGTCGATGTCTTCCGAGTGAGAAACATGAACGTCATCATTCGCCTCTCGTCAGCGTCGATAATTTTCCCGGCGAAAATTGATCGCAAATACTTTTTCTCGACAACCCATCTTCCGTTCTGCGCTTACAATTCAACCTGTACGGCTCCCACAGCGAACGATTTCGACCCACTAATCATCTCAGACCTTATTTCCAGGCAACAATGGTCAAACCTCAAATCCCATTTAAAATTCAAAAGTCCCATCGATTTTCTTCACCAGTTGCTCGGTTCGGGAGCCGTCGACCCATTGCTTGTTCTCAGGTACTTCAATTGGTCCCAGAAAGAGCTTAAAGTTAATTACAACATCGAACTCCTTTGCAGACTCTTAATTTTATTGGCCAATGCTAAATGTTACCCCAAAATTCGATCATTTCTCGACTCTTTTGTAAAGGGTGAAACAAATTGCACGATTTCTTTGATTTTTCATACGCTTTCAGTGTGTAGCGACCAATTTTGTGCTAATTCGATAATTGCTGATATGTTGGTGTTAGCTTATGTGAAAAATTCGAAAACAGTTTTGGGATTGGAGGCATTTAAGAGAGCTGGTGATTACGGGTATAAGTTATCTGTGTTATCTTGTAACCCATTGTTGAGTTCCTTGGTGAAGGAGAATGAATTTGGGGATGTGGAATTTGTGTATAAAGAGATGATTAGAAGGAAAGTTAGTCCTAATTTGATTACATTTAATATTGTGATTAATGGGTTGTGTAAGGTCGGGAAATTGAATAAAGCTGGAGATGTTATTGATGATATGAAAGTATGGGGATTCTGGCCTAATGTGGTTACCTATAACACTCTCATTGATGGATACTGTAAAATAGGTAGGGTTGGGAAGATGTATAAAGCTGATGCTATTTTGAAGGAAATGGTGGCAAATAAAGTTAGCCCAAATGATGTTACTTTTAATATATTGATTGATGGGTTCTGTAAAGATGAAAACGTATCGGCTGCGTTGAAGGTGTTTGAGGAAATGCAGGGTCAGGGTCTGAAGCCTACCGTAGTAACATACAATTCCTTAATTAATGGTTTGTGCAATGAAGGTAAACTGAACGAGGGAAAAGTTTTGCTTGATGAAATGTTGAGTTCAAACTTGAAGCCTAATGTCATTACTTATAATGCCCTGATTAATGGGTATTGTAAGAAGAAGTTGTTGGAGGAAGCAAGGGAGTTGTTTGATAACATTGGAAAACAAGGGCTGGCTCCCAATGTTATAACATTCAATACATTACTTGATGGATATTGCAAGTGTGGAAAGATGGAAGAGGCTTTTTTGCTGCAGAATTTAATGTTAGAAAAAGGATTTCTCCCAGATGTCTCGACCTACAATTGCCTTATCGTTGGTTTTTGTAGGGAGGGAAAAATGGAGGAAGTCAAGAATCTTTTAAATGAAATGAAACGTAGAGGTCTGAAAGCGGATACAGTGACGTACAATATTTTGATAAGTGCATGGTGTGAGAAAAGGGAGCCGAAAAAGGCAGCGCGACTCATCGATGAGATGCTCGACAGGGGATTACAGCCAACTCATTTGACATATAACATTTTGTTGAATGGCCATTGTATGGAAGGAAACTTAAGGGCTGCTTTGAATGTGAGGAAGCAAATGGAGAAAGAAGGAAGATGGGCTAATGTGGTAACGTATAATGTGCTGATTCAAGGCTATTGTAGAAAGGGAAAATTGGAAGATGCAAATGGACTTCTTAATGAGATGCTGGAGAAGGGATTAATTCCGAATCGTACTACTTATGAGATAATTAAAGAGGAAATGATGGAGAAAGGATTTCTCCCTGATATAGAAGGTCATCTTTATCAAGTCTCCCGCTAG

Coding sequence (CDS)

ATGAAATGGTCCAGCCCTAACCATTTTCTCTCTGTTCTCGGAGAAATTCCGGTCGATGTCTTCCGAGTGAGAAACATGAACGTCATCATTCGCCTCTCGTCAGCGTCGATAATTTTCCCGGCGAAAATTGATCGCAAATACTTTTTCTCGACAACCCATCTTCCGTTCTGCGCTTACAATTCAACCTGTACGGCTCCCACAGCGAACGATTTCGACCCACTAATCATCTCAGACCTTATTTCCAGGCAACAATGGTCAAACCTCAAATCCCATTTAAAATTCAAAAGTCCCATCGATTTTCTTCACCAGTTGCTCGGTTCGGGAGCCGTCGACCCATTGCTTGTTCTCAGGTACTTCAATTGGTCCCAGAAAGAGCTTAAAGTTAATTACAACATCGAACTCCTTTGCAGACTCTTAATTTTATTGGCCAATGCTAAATGTTACCCCAAAATTCGATCATTTCTCGACTCTTTTGTAAAGGGTGAAACAAATTGCACGATTTCTTTGATTTTTCATACGCTTTCAGTGTGTAGCGACCAATTTTGTGCTAATTCGATAATTGCTGATATGTTGGTGTTAGCTTATGTGAAAAATTCGAAAACAGTTTTGGGATTGGAGGCATTTAAGAGAGCTGGTGATTACGGGTATAAGTTATCTGTGTTATCTTGTAACCCATTGTTGAGTTCCTTGGTGAAGGAGAATGAATTTGGGGATGTGGAATTTGTGTATAAAGAGATGATTAGAAGGAAAGTTAGTCCTAATTTGATTACATTTAATATTGTGATTAATGGGTTGTGTAAGGTCGGGAAATTGAATAAAGCTGGAGATGTTATTGATGATATGAAAGTATGGGGATTCTGGCCTAATGTGGTTACCTATAACACTCTCATTGATGGATACTGTAAAATAGGTAGGGTTGGGAAGATGTATAAAGCTGATGCTATTTTGAAGGAAATGGTGGCAAATAAAGTTAGCCCAAATGATGTTACTTTTAATATATTGATTGATGGGTTCTGTAAAGATGAAAACGTATCGGCTGCGTTGAAGGTGTTTGAGGAAATGCAGGGTCAGGGTCTGAAGCCTACCGTAGTAACATACAATTCCTTAATTAATGGTTTGTGCAATGAAGGTAAACTGAACGAGGGAAAAGTTTTGCTTGATGAAATGTTGAGTTCAAACTTGAAGCCTAATGTCATTACTTATAATGCCCTGATTAATGGGTATTGTAAGAAGAAGTTGTTGGAGGAAGCAAGGGAGTTGTTTGATAACATTGGAAAACAAGGGCTGGCTCCCAATGTTATAACATTCAATACATTACTTGATGGATATTGCAAGTGTGGAAAGATGGAAGAGGCTTTTTTGCTGCAGAATTTAATGTTAGAAAAAGGATTTCTCCCAGATGTCTCGACCTACAATTGCCTTATCGTTGGTTTTTGTAGGGAGGGAAAAATGGAGGAAGTCAAGAATCTTTTAAATGAAATGAAACGTAGAGGTCTGAAAGCGGATACAGTGACGTACAATATTTTGATAAGTGCATGGTGTGAGAAAAGGGAGCCGAAAAAGGCAGCGCGACTCATCGATGAGATGCTCGACAGGGGATTACAGCCAACTCATTTGACATATAACATTTTGTTGAATGGCCATTGTATGGAAGGAAACTTAAGGGCTGCTTTGAATGTGAGGAAGCAAATGGAGAAAGAAGGAAGATGGGCTAATGTGGTAACGTATAATGTGCTGATTCAAGGCTATTGTAGAAAGGGAAAATTGGAAGATGCAAATGGACTTCTTAATGAGATGCTGGAGAAGGGATTAATTCCGAATCGTACTACTTATGAGATAATTAAAGAGGAAATGATGGAGAAAGGATTTCTCCCTGATATAGAAGGTCATCTTTATCAAGTCTCCCGCTAG

Protein sequence

MKWSSPNHFLSVLGEIPVDVFRVRNMNVIIRLSSASIIFPAKIDRKYFFSTTHLPFCAYNSTCTAPTANDFDPLIISDLISRQQWSNLKSHLKFKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELLCRLLILLANAKCYPKIRSFLDSFVKGETNCTISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRRKVSPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKMYKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVTYNILISAWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYQVSR
Homology
BLAST of Lsi11G006290 vs. ExPASy Swiss-Prot
Match: O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 683.3 bits (1762), Expect = 2.6e-195
Identity = 333/581 (57.31%), Postives = 433/581 (74.53%), Query Frame = 0

Query: 57  CAYNSTCT-APTANDFDPLIISDLISRQQWSNLKSHLKFKSPIDFLHQLLGSGAVDPLLV 116
           C+ +ST T +P    +D  +I+DLI +Q WS L  H+   +P +   QL+ S  +DP L 
Sbjct: 26  CSSSSTITGSPCPPRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLI-SSELDPDLC 85

Query: 117 LRYFNWSQKELKVNYNIELLCRLLILLANAKCYPKIRSFLDSFVKGETNCTISLIFHTLS 176
           LRY++W  K   ++ ++EL  +LL  LANAK Y KIRSFLD FV+  ++  +  IFH +S
Sbjct: 86  LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 145

Query: 177 VCSDQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYGYKLSVLSCNPLLSSLVKENE 236
           +C D  C NSIIADMLVLAY  NS+  LG EAFKR+G YGYKLS LSC PL+ +L+KEN 
Sbjct: 146 MC-DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 205

Query: 237 FGDVEFVYKEMIRRKVSPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPNVVTYNT 296
             DVE+VYKEMIRRK+ PN+ TFN+VIN LCK GK+NKA DV++DMKV+G  PNVV+YNT
Sbjct: 206 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 265

Query: 297 LIDGYCKIGRVGKMYKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALKVFEEMQ 356
           LIDGYCK+G  GKMYKADA+LKEMV N VSPN  TFNILIDGF KD+N+  ++KVF+EM 
Sbjct: 266 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 325

Query: 357 GQGLKPTVVTYNSLINGLCNEGKLNEGKVLLDEMLSSNLKPNVITYNALINGYCKKKLLE 416
            Q +KP V++YNSLINGLCN GK++E   + D+M+S+ ++PN+ITYNALING+CK  +L+
Sbjct: 326 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 385

Query: 417 EARELFDNIGKQGLAPNVITFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLI 476
           EA ++F ++  QG  P    +N L+D YCK GK+++ F L+  M  +G +PDV TYNCLI
Sbjct: 386 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 445

Query: 477 VGFCREGKMEEVKNLLNEMKRRGLKADTVTYNILISAWCEKREPKKAARLIDEMLDRGLQ 536
            G CR G +E  K L +++  +GL  D VT++IL+  +C K E +KAA L+ EM   GL+
Sbjct: 446 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 505

Query: 537 PTHLTYNILLNGHCMEGNLRAALNVRKQMEKEGRW-ANVVTYNVLIQGYCRKGKLEDANG 596
           P HLTYNI++ G+C EGNL+AA N+R QMEKE R   NV +YNVL+QGY +KGKLEDAN 
Sbjct: 506 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 565

Query: 597 LLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYQVS 636
           LLNEMLEKGL+PNR TYEI+KEEM+++GF+PDIEGHL+ VS
Sbjct: 566 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVS 603

BLAST of Lsi11G006290 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.3e-90
Identity = 191/561 (34.05%), Postives = 294/561 (52.41%), Query Frame = 0

Query: 91  HLKFKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELLCRLLILLANAKCYPK 150
           HL      +    LL     D  L+L++ NW+       + +   C  L +L   K Y K
Sbjct: 41  HLSANFTPEAASNLLLKSQNDQALILKFLNWANPH--QFFTLRCKCITLHILTKFKLY-K 100

Query: 151 IRSFLDSFVKGET--NCTISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTVLGLEAF 210
               L   V  +T  +   SL+F +L    D   + S + D++V +Y + S     L   
Sbjct: 101 TAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIV 160

Query: 211 KRAGDYGYKLSVLSCNPLLSSLVK-ENEFGDVEFVYKEMIRRKVSPNLITFNIVINGLCK 270
             A  +G+   VLS N +L + ++ +      E V+KEM+  +VSPN+ T+NI+I G C 
Sbjct: 161 HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCF 220

Query: 271 VGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRV--------------------- 330
            G ++ A  + D M+  G  PNVVTYNTLIDGYCK+ ++                     
Sbjct: 221 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 280

Query: 331 -----------GKMYKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALKVFEEMQ 390
                      G+M +   +L EM     S ++VT+N LI G+CK+ N   AL +  EM 
Sbjct: 281 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 340

Query: 391 GQGLKPTVVTYNSLINGLCNEGKLNEGKVLLDEMLSSNLKPNVITYNALINGYCKKKLLE 450
             GL P+V+TY SLI+ +C  G +N     LD+M    L PN  TY  L++G+ +K  + 
Sbjct: 341 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 400

Query: 451 EARELFDNIGKQGLAPNVITFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLI 510
           EA  +   +   G +P+V+T+N L++G+C  GKME+A  +   M EKG  PDV +Y+ ++
Sbjct: 401 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 460

Query: 511 VGFCREGKMEEVKNLLNEMKRRGLKADTVTYNILISAWCEKREPKKAARLIDEMLDRGLQ 570
            GFCR   ++E   +  EM  +G+K DT+TY+ LI  +CE+R  K+A  L +EML  GL 
Sbjct: 461 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 520

Query: 571 PTHLTYNILLNGHCMEGNLRAALNVRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGL 617
           P   TY  L+N +CMEG+L  AL +  +M ++G   +VVTY+VLI G  ++ +  +A  L
Sbjct: 521 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 580

BLAST of Lsi11G006290 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.5e-83
Identity = 188/606 (31.02%), Postives = 321/606 (52.97%), Query Frame = 0

Query: 76  ISDLISRQQWSNLKSHLK---FKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNI 135
           I+++I  ++   L+  LK    K   D L  +L     D  LVL +F+W++   + + N+
Sbjct: 62  ITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARS--RRDSNL 121

Query: 136 ELLCRLLILLANAKCYPKIRSFLDSF-VKGETNCTISLI--FHTLSVCSDQFCANSIIAD 195
           E LC ++ L   +K     +S + SF  + + N T S +  F  L      + ++  + D
Sbjct: 122 ESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFD 181

Query: 196 MLVLAYVKNSKTVLGLEAFKRAGDYGYKLSVLSCNPLLSSLVKE-NEFGDVEFVYKEMIR 255
           +     V           F++  +YG  LSV SCN  L+ L K+  +      V++E   
Sbjct: 182 VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE 241

Query: 256 RKVSPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGK 315
             V  N+ ++NIVI+ +C++G++ +A  ++  M++ G+ P+V++Y+T+++GYC+ G + K
Sbjct: 242 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 301

Query: 316 MYKADAILK--------------------------------EMVANKVSPNDVTFNILID 375
           ++K   ++K                                EM+   + P+ V +  LID
Sbjct: 302 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 361

Query: 376 GFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVLLDEMLSSNLKP 435
           GFCK  ++ AA K F EM  + + P V+TY ++I+G C  G + E   L  EM    L+P
Sbjct: 362 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 421

Query: 436 NVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCKCGKMEEAFLLQ 495
           + +T+  LINGYCK   +++A  + +++ + G +PNV+T+ TL+DG CK G ++ A  L 
Sbjct: 422 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 481

Query: 496 NLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVTYNILISAWCEK 555
           + M + G  P++ TYN ++ G C+ G +EE   L+ E +  GL ADTVTY  L+ A+C+ 
Sbjct: 482 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 541

Query: 556 REPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQMEKEGRWANVVTY 615
            E  KA  ++ EML +GLQPT +T+N+L+NG C+ G L     +   M  +G   N  T+
Sbjct: 542 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 601

Query: 616 NVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE-IIK-----EEMMEKGFL-PDIEG 636
           N L++ YC +  L+ A  +  +M  +G+ P+  TYE ++K       M E  FL  +++G
Sbjct: 602 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 661

BLAST of Lsi11G006290 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.5e-81
Identity = 149/439 (33.94%), Postives = 259/439 (59.00%), Query Frame = 0

Query: 190 MLVLAYVKNSKTVLGLEAFKRAGDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRR 249
           +++  Y +  K +       RA   GY+   ++ + L++    E    +   +   M+  
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 250 KVSPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKM 309
           K  P+L+T + +INGLC  G++++A  +ID M  +GF P+ VTY  +++  CK G     
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA-- 229

Query: 310 YKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSL 369
             A  + ++M    +  + V ++I+ID  CKD +   AL +F EM+ +G+K  VVTY+SL
Sbjct: 230 -LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 289

Query: 370 INGLCNEGKLNEGKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL 429
           I GLCN+GK ++G  +L EM+  N+ P+V+T++ALI+ + K+  L EA+EL++ +  +G+
Sbjct: 290 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 349

Query: 430 APNVITFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKN 489
           AP+ IT+N+L+DG+CK   + EA  + +LM+ KG  PD+ TY+ LI  +C+  ++++   
Sbjct: 350 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 409

Query: 490 LLNEMKRRGLKADTVTYNILISAWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHC 549
           L  E+  +GL  +T+TYN L+  +C+  +   A  L  EM+ RG+ P+ +TY ILL+G C
Sbjct: 410 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 469

Query: 550 MEGNLRAALNVRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRT 609
             G L  AL + ++M+K      +  YN++I G C   K++DA  L   + +KG+ P+  
Sbjct: 470 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 529

Query: 610 TYEIIKEEMMEKGFLPDIE 629
           TY ++   + +KG L + +
Sbjct: 530 TYNVMIGGLCKKGSLSEAD 545

BLAST of Lsi11G006290 vs. ExPASy Swiss-Prot
Match: Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.6e-80
Identity = 155/453 (34.22%), Postives = 259/453 (57.17%), Query Frame = 0

Query: 190 MLVLAYVKNSKTVLGLEAFKRAGDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRR 249
           +L+  + + S+  L L    +    GY+  +++ N LL+     N   D   +  +M+  
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 250 KVSPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKM 309
              P+  TFN +I+GL +  + ++A  ++D M V G  P++VTY  +++G CK G +   
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID-- 240

Query: 310 YKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSL 369
             A ++LK+M   K+ P  V +N +ID  C  +NV+ AL +F EM  +G++P VVTYNSL
Sbjct: 241 -LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 300

Query: 370 INGLCNEGKLNEGKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL 429
           I  LCN G+ ++   LL +M+   + PNV+T++ALI+ + K+  L EA +L+D + K+ +
Sbjct: 301 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 360

Query: 430 APNVITFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKN 489
            P++ T+++L++G+C   +++EA  +  LM+ K   P+V TYN LI GFC+  +++E   
Sbjct: 361 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 420

Query: 490 LLNEMKRRGLKADTVTYNILISAWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHC 549
           L  EM +RGL  +TVTY  LI  + + RE   A  +  +M+  G+ P  +TY+ILL+G C
Sbjct: 421 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 480

Query: 550 MEGNLRAALNVRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRT 609
             G +  AL V + +++     ++ TYN++I+G C+ GK+ED   L   +  KG+ PN  
Sbjct: 481 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 540

Query: 610 TY----------------EIIKEEMMEKGFLPD 627
           TY                + +  EM E+G LPD
Sbjct: 541 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570

BLAST of Lsi11G006290 vs. ExPASy TrEMBL
Match: A0A5D3BCX2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001150 PE=4 SV=1)

HSP 1 Score: 1140.6 bits (2949), Expect = 0.0e+00
Identity = 556/610 (91.15%), Postives = 581/610 (95.25%), Query Frame = 0

Query: 26  MNVIIRLSSASIIFPAKIDRKYFFSTTHLPFCAYNSTCTAPTANDFDPLIISDLISRQQW 85
           MNVIIRLSSAS IFP KIDR Y FSTTHLPFC YNSTCTAPT+NDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLPFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 86  SNLKSHLKFKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELLCRLLILLANA 145
           S LKSH+KFKSPIDFLHQL+ SGAVDPLLVLRYFNWS++ELKVNY+IEL+CRLL LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 146 KCYPKIRSFLDSFVKGETNCTISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTVLGL 205
           K YPKIRS LDSFVKGETNC+ISLIFH+LSVCSDQFCANSIIADMLVLAYV+NSKTVLGL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 206 EAFKRAGDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRRKVSPNLITFNIVINGL 265
           EAFKRAGDY YKLSVLSCNPLLS+LVKE+E GDVEFVYKEMIRRK+SPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEVGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 266 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKMYKADAILKEMVANKVS 325
           CKVGKLNKAGDVIDDMKVWGFWPN VTYNTLIDGYCK+GRVGKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 326 PNDVTFNILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVL 385
           PN VTFN+LIDGFCKDENVS ALKVFEEMQ QGLKPTVVTYNSLING+CNEGKLNE KVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 386 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK 445
           LDEMLSSNLKPNVITYNALINGYCKKK LEEARELFDNIGKQGL PNVITFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 446 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVT 505
           CGKMEEAFLLQ +MLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEM+ RG+KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 506 YNILISAWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQME 565
           YNILISAWCEK+EPKKAARLIDEMLDRGL+P+HLTYNILLNG+CMEGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 566 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 625
           KE  WANVVTYNVLI GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 626 DIEGHLYQVS 636
           DIEGHLY  S
Sbjct: 601 DIEGHLYHAS 610

BLAST of Lsi11G006290 vs. ExPASy TrEMBL
Match: A0A5A7U323 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001350 PE=4 SV=1)

HSP 1 Score: 1140.2 bits (2948), Expect = 0.0e+00
Identity = 556/610 (91.15%), Postives = 581/610 (95.25%), Query Frame = 0

Query: 26  MNVIIRLSSASIIFPAKIDRKYFFSTTHLPFCAYNSTCTAPTANDFDPLIISDLISRQQW 85
           MNVIIRLSSAS IFP KIDR Y FSTTHL FC YNSTCTAPT+NDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLSFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 86  SNLKSHLKFKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELLCRLLILLANA 145
           S LKSH+KFKSPIDFLHQL+ SGAVDPLLVLRYFNWS++ELKVNY+IEL+CRLL LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 146 KCYPKIRSFLDSFVKGETNCTISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTVLGL 205
           K YPKIRS LDSFVKGETNC+ISLIFH+LSVCSDQFCANSIIADMLVLAYV+NSKTVLGL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 206 EAFKRAGDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRRKVSPNLITFNIVINGL 265
           EAFKRAGDY YKLSVLSCNPLLS+LVKE+EFGDVEFVYKEMIRRK+SPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 266 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKMYKADAILKEMVANKVS 325
           CKVGKLNKAGDVIDDMKVWGFWPN VTYNTLIDGYCK+GRVGKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 326 PNDVTFNILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVL 385
           PN VTFN+LIDGFCKDENVS ALKVFEEMQ QGLKPTVVTYNSLING+CNEGKLNE KVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 386 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK 445
           LDEMLSSNLKPNVITYNALINGYCKKK LEEARELFDNIGKQGL PNVITFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 446 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVT 505
           CGKMEEAFLLQ +MLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEM+ RG+KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 506 YNILISAWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQME 565
           YNILISAWCEK+EPKKAARLIDEMLDRGL+P+HLTYNILLNG+CMEGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 566 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 625
           KE  WANVVTYNVLI GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 626 DIEGHLYQVS 636
           DIEGHLY  S
Sbjct: 601 DIEGHLYHAS 610

BLAST of Lsi11G006290 vs. ExPASy TrEMBL
Match: A0A1S3BXE0 (pentatricopeptide repeat-containing protein At1g09820 OS=Cucumis melo OX=3656 GN=LOC103494244 PE=4 SV=1)

HSP 1 Score: 1140.2 bits (2948), Expect = 0.0e+00
Identity = 556/610 (91.15%), Postives = 581/610 (95.25%), Query Frame = 0

Query: 26  MNVIIRLSSASIIFPAKIDRKYFFSTTHLPFCAYNSTCTAPTANDFDPLIISDLISRQQW 85
           MNVIIRLSSAS IFP KIDR Y FSTTHL FC YNSTCTAPT+NDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLSFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 86  SNLKSHLKFKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELLCRLLILLANA 145
           S LKSH+KFKSPIDFLHQL+ SGAVDPLLVLRYFNWS++ELKVNY+IEL+CRLL LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 146 KCYPKIRSFLDSFVKGETNCTISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTVLGL 205
           K YPKIRS LDSFVKGETNC+ISLIFH+LSVCSDQFCANSIIADMLVLAYV+NSKTVLGL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 206 EAFKRAGDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRRKVSPNLITFNIVINGL 265
           EAFKRAGDY YKLSVLSCNPLLS+LVKE+EFGDVEFVYKEMIRRK+SPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 266 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKMYKADAILKEMVANKVS 325
           CKVGKLNKAGDVIDDMKVWGFWPN VTYNTLIDGYCK+GRVGKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 326 PNDVTFNILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVL 385
           PN VTFN+LIDGFCKDENVS ALKVFEEMQ QGLKPTVVTYNSLING+CNEGKLNE KVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 386 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK 445
           LDEMLSSNLKPNVITYNALINGYCKKK LEEARELFDNIGKQGL PNVITFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 446 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVT 505
           CGKMEEAFLLQ +MLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEM+ RG+KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 506 YNILISAWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQME 565
           YNILISAWCEK+EPKKAARLIDEMLDRGL+P+HLTYNILLNG+CMEGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 566 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 625
           KE  WANVVTYNVLI GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 626 DIEGHLYQVS 636
           DIEGHLY  S
Sbjct: 601 DIEGHLYHAS 610

BLAST of Lsi11G006290 vs. ExPASy TrEMBL
Match: A0A6J1DRY0 (pentatricopeptide repeat-containing protein At1g09820 OS=Momordica charantia OX=3673 GN=LOC111023289 PE=4 SV=1)

HSP 1 Score: 1130.5 bits (2923), Expect = 0.0e+00
Identity = 552/611 (90.34%), Postives = 579/611 (94.76%), Query Frame = 0

Query: 26  MNVIIRLSSASIIFPAKIDRKYFFSTTHLPFCAYNSTCTAPTANDFDPLIISDLISRQQW 85
           MN + RL     IFPAKIDRKY FSTTH P C YNST TA ++NDFDP IIS+LISRQQW
Sbjct: 1   MNAVNRLPWR--IFPAKIDRKYIFSTTHPPLCTYNSTSTASSSNDFDPQIISELISRQQW 60

Query: 86  SNLKSHLKFKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELLCRLLILLANA 145
           SNLKSH KFKSPIDFLH LLGSGAVDPLLVLRYFNWSQKELKVNY+IEL CRLL LLANA
Sbjct: 61  SNLKSHFKFKSPIDFLHLLLGSGAVDPLLVLRYFNWSQKELKVNYSIELFCRLLNLLANA 120

Query: 146 KCYPKIRSFLDSFVKGETNCTISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTVLGL 205
           KCYPKIRSFLDSFVKGETNCTISLIF+TLSVC DQFCANSIIADMLVLAYVKNSKT LGL
Sbjct: 121 KCYPKIRSFLDSFVKGETNCTISLIFYTLSVCGDQFCANSIIADMLVLAYVKNSKTSLGL 180

Query: 206 EAFKRAGDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRRKVSPNLITFNIVINGL 265
           EAFKR+GDYGYKLSVLSCNPLLS+LVKE+EFGDVEFVYKEMIRRKVSPNLITFNIVINGL
Sbjct: 181 EAFKRSGDYGYKLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKVSPNLITFNIVINGL 240

Query: 266 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKMYKADAILKEMVANKVS 325
           CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCK+GRVGKMYKADAILKEMVANKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVS 300

Query: 326 PNDVTFNILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVL 385
           PNDVTFNILIDGFCKDEN+SAALKVFEEM+ QGLKP+VVTYNSLINGLCNEGKLNE   L
Sbjct: 301 PNDVTFNILIDGFCKDENISAALKVFEEMRIQGLKPSVVTYNSLINGLCNEGKLNEANTL 360

Query: 386 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK 445
           LDEM +SNLKPNV+TYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK
Sbjct: 361 LDEMSNSNLKPNVVTYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK 420

Query: 446 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVT 505
           CGKM+EAFLL++LMLEKG  PDVSTYNCLIVGFC+EGKMEEV+NLLNEM+ RGLKAD VT
Sbjct: 421 CGKMDEAFLLRSLMLEKGLPPDVSTYNCLIVGFCKEGKMEEVENLLNEMEERGLKADLVT 480

Query: 506 YNILISAWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQME 565
           YNILISAWCEKREPKKAA LIDEM  RGL+P+HLTYNILLNG+C+EGNLRAALNVRKQME
Sbjct: 481 YNILISAWCEKREPKKAAGLIDEMFHRGLRPSHLTYNILLNGYCIEGNLRAALNVRKQME 540

Query: 566 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 625
           K+GRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII+EEMMEKGFLP
Sbjct: 541 KDGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIREEMMEKGFLP 600

Query: 626 DIEGHLYQVSR 637
           DIEGHLYQVSR
Sbjct: 601 DIEGHLYQVSR 609

BLAST of Lsi11G006290 vs. ExPASy TrEMBL
Match: A0A6J1FI86 (pentatricopeptide repeat-containing protein At1g09820 OS=Cucurbita moschata OX=3662 GN=LOC111444357 PE=4 SV=1)

HSP 1 Score: 1109.4 bits (2868), Expect = 0.0e+00
Identity = 533/605 (88.10%), Postives = 569/605 (94.05%), Query Frame = 0

Query: 32  LSSASIIFPAKIDRKYFFSTTHLPFCAYNSTCTAPTANDFDPLIISDLISRQQWSNLKSH 91
           +S   IIF AK  R+Y FSTTHLPFC YNST TAPT+NDFDP IISDLISRQQWSNLKSH
Sbjct: 5   ISFGPIIFTAKFGRRYKFSTTHLPFCTYNSTYTAPTSNDFDPQIISDLISRQQWSNLKSH 64

Query: 92  LKFKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELLCRLLILLANAKCYPKI 151
            KFK+PIDFLH+LLGSGAVDPLLVLRYF WSQKELKVNYNIEL CRLL LLANAK YPK+
Sbjct: 65  FKFKTPIDFLHELLGSGAVDPLLVLRYFKWSQKELKVNYNIELFCRLLNLLANAKYYPKM 124

Query: 152 RSFLDSFVKGETNCTISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTVLGLEAFKRA 211
           RSFLDSFVK ETNCTISLIFHTLSVC DQFCANSIIADMLVLAYVKNSKT LGLEAFKRA
Sbjct: 125 RSFLDSFVKRETNCTISLIFHTLSVCGDQFCANSIIADMLVLAYVKNSKTALGLEAFKRA 184

Query: 212 GDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRRKVSPNLITFNIVINGLCKVGKL 271
           GDYGYKLSVLSCNPLL++LVKENEFGDVEFVYKEMIRRK SPNL TFNIVI+GLCK+G+L
Sbjct: 185 GDYGYKLSVLSCNPLLNALVKENEFGDVEFVYKEMIRRKFSPNLFTFNIVIHGLCKIGRL 244

Query: 272 NKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKMYKADAILKEMVANKVSPNDVTF 331
           NKAGDV+DDMK+WGF PNVVTYNTLIDGYCK+GRVGKM+KADAILKEMVAN VSPNDVTF
Sbjct: 245 NKAGDVLDDMKIWGFLPNVVTYNTLIDGYCKVGRVGKMFKADAILKEMVANNVSPNDVTF 304

Query: 332 NILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVLLDEMLS 391
           NILIDGFCKDEN SAA+KVF+EMQ QG+KPTVVTYNSLINGLCNEGKLNE +VLLDEM S
Sbjct: 305 NILIDGFCKDENASAAMKVFDEMQSQGVKPTVVTYNSLINGLCNEGKLNEARVLLDEMSS 364

Query: 392 SNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCKCGKMEE 451
            NLKPNV+TYNALINGYCKKKLLEEAR+LFD+IGKQGL PNVITFNTL+DGYCKCGKM E
Sbjct: 365 LNLKPNVVTYNALINGYCKKKLLEEARDLFDDIGKQGLDPNVITFNTLVDGYCKCGKMNE 424

Query: 452 AFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVTYNILIS 511
           AFL+++LM EKGFLP+VSTYNCLI GFCREGKMEE KNLLNEM+ RGLKADT+TYNILIS
Sbjct: 425 AFLVRSLMFEKGFLPNVSTYNCLITGFCREGKMEEAKNLLNEMEGRGLKADTITYNILIS 484

Query: 512 AWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQMEKEGRWA 571
           AWCEK E KKAARLIDEMLDRGLQP+HLT+NILLNG+C EGNLRAALNVRKQMEKEGRWA
Sbjct: 485 AWCEKGESKKAARLIDEMLDRGLQPSHLTFNILLNGYCTEGNLRAALNVRKQMEKEGRWA 544

Query: 572 NVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHL 631
           NVVTYNVLI+GYCRKGK+EDANGLLNEMLEKGLIPNRTTYEI++EEMMEKGFLPDIEGHL
Sbjct: 545 NVVTYNVLIRGYCRKGKMEDANGLLNEMLEKGLIPNRTTYEIVREEMMEKGFLPDIEGHL 604

Query: 632 YQVSR 637
           YQVSR
Sbjct: 605 YQVSR 609

BLAST of Lsi11G006290 vs. NCBI nr
Match: XP_038891207.1 (pentatricopeptide repeat-containing protein At1g09820 [Benincasa hispida])

HSP 1 Score: 1177.2 bits (3044), Expect = 0.0e+00
Identity = 571/611 (93.45%), Postives = 593/611 (97.05%), Query Frame = 0

Query: 26  MNVIIRLSSASIIFPAKIDRKYFFSTTHLPFCAYNSTCTAPTANDFDPLIISDLISRQQW 85
           MNVIIR+SS S IFP KI RK+ FSTT+LPFC YNSTCTAPT+ND DPLIISDLISRQQW
Sbjct: 1   MNVIIRISSTSTIFPVKIYRKFIFSTTYLPFCTYNSTCTAPTSNDSDPLIISDLISRQQW 60

Query: 86  SNLKSHLKFKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELLCRLLILLANA 145
           S LKSH KFKSP+DFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIEL CRL+ LLANA
Sbjct: 61  STLKSHFKFKSPVDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELFCRLIHLLANA 120

Query: 146 KCYPKIRSFLDSFVKGETNCTISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTVLGL 205
           KCYPKIRSFLDSFVKGETNC+ISLIFHTLSVCSDQFCANSIIAD+LVLAYVKNSKTVLGL
Sbjct: 121 KCYPKIRSFLDSFVKGETNCSISLIFHTLSVCSDQFCANSIIADILVLAYVKNSKTVLGL 180

Query: 206 EAFKRAGDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRRKVSPNLITFNIVINGL 265
           EAFKRAGDYGYKLSVLSCNPLLS+LVKENEFGD+EFVYKEMIRRKV+PNLITFNIVINGL
Sbjct: 181 EAFKRAGDYGYKLSVLSCNPLLSALVKENEFGDMEFVYKEMIRRKVNPNLITFNIVINGL 240

Query: 266 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKMYKADAILKEMVANKVS 325
           CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCK+G+VGKMYKADAILKEMVANKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGKVGKMYKADAILKEMVANKVS 300

Query: 326 PNDVTFNILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVL 385
           PNDVTFN LIDGFCKDENV AALKVFEEMQ QGLKPTVVTYNSLINGLCNEGKLNE KVL
Sbjct: 301 PNDVTFNTLIDGFCKDENVLAALKVFEEMQSQGLKPTVVTYNSLINGLCNEGKLNEAKVL 360

Query: 386 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK 445
           LD MLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI KQGLAPNVITFNTLLDGYCK
Sbjct: 361 LDGMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIRKQGLAPNVITFNTLLDGYCK 420

Query: 446 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVT 505
           CGKMEEAFLLQNLMLEKGFLPD+STYNCLIVGFCREGKMEEVK LLNEM+RRG+KADTVT
Sbjct: 421 CGKMEEAFLLQNLMLEKGFLPDISTYNCLIVGFCREGKMEEVKKLLNEMERRGVKADTVT 480

Query: 506 YNILISAWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQME 565
           YNILISAWCEKREPKKAARL+DEML+RGLQP+HLT+NILLNG+CMEGNLRAALNVRKQME
Sbjct: 481 YNILISAWCEKREPKKAARLVDEMLERGLQPSHLTFNILLNGYCMEGNLRAALNVRKQME 540

Query: 566 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 625
           KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPN+TTYEIIKEEMMEKGFLP
Sbjct: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNQTTYEIIKEEMMEKGFLP 600

Query: 626 DIEGHLYQVSR 637
           DIEGHLYQVSR
Sbjct: 601 DIEGHLYQVSR 611

BLAST of Lsi11G006290 vs. NCBI nr
Match: TYJ96471.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1140.6 bits (2949), Expect = 0.0e+00
Identity = 556/610 (91.15%), Postives = 581/610 (95.25%), Query Frame = 0

Query: 26  MNVIIRLSSASIIFPAKIDRKYFFSTTHLPFCAYNSTCTAPTANDFDPLIISDLISRQQW 85
           MNVIIRLSSAS IFP KIDR Y FSTTHLPFC YNSTCTAPT+NDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLPFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 86  SNLKSHLKFKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELLCRLLILLANA 145
           S LKSH+KFKSPIDFLHQL+ SGAVDPLLVLRYFNWS++ELKVNY+IEL+CRLL LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 146 KCYPKIRSFLDSFVKGETNCTISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTVLGL 205
           K YPKIRS LDSFVKGETNC+ISLIFH+LSVCSDQFCANSIIADMLVLAYV+NSKTVLGL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 206 EAFKRAGDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRRKVSPNLITFNIVINGL 265
           EAFKRAGDY YKLSVLSCNPLLS+LVKE+E GDVEFVYKEMIRRK+SPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEVGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 266 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKMYKADAILKEMVANKVS 325
           CKVGKLNKAGDVIDDMKVWGFWPN VTYNTLIDGYCK+GRVGKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 326 PNDVTFNILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVL 385
           PN VTFN+LIDGFCKDENVS ALKVFEEMQ QGLKPTVVTYNSLING+CNEGKLNE KVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 386 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK 445
           LDEMLSSNLKPNVITYNALINGYCKKK LEEARELFDNIGKQGL PNVITFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 446 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVT 505
           CGKMEEAFLLQ +MLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEM+ RG+KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 506 YNILISAWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQME 565
           YNILISAWCEK+EPKKAARLIDEMLDRGL+P+HLTYNILLNG+CMEGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 566 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 625
           KE  WANVVTYNVLI GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 626 DIEGHLYQVS 636
           DIEGHLY  S
Sbjct: 601 DIEGHLYHAS 610

BLAST of Lsi11G006290 vs. NCBI nr
Match: XP_008453581.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09820 [Cucumis melo] >KAA0048065.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1140.2 bits (2948), Expect = 0.0e+00
Identity = 556/610 (91.15%), Postives = 581/610 (95.25%), Query Frame = 0

Query: 26  MNVIIRLSSASIIFPAKIDRKYFFSTTHLPFCAYNSTCTAPTANDFDPLIISDLISRQQW 85
           MNVIIRLSSAS IFP KIDR Y FSTTHL FC YNSTCTAPT+NDFDPLIISDLISRQ+W
Sbjct: 1   MNVIIRLSSASRIFPVKIDRNYIFSTTHLSFCTYNSTCTAPTSNDFDPLIISDLISRQRW 60

Query: 86  SNLKSHLKFKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELLCRLLILLANA 145
           S LKSH+KFKSPIDFLHQL+ SGAVDPLLVLRYFNWS++ELKVNY+IEL+CRLL LLAN 
Sbjct: 61  SILKSHVKFKSPIDFLHQLMCSGAVDPLLVLRYFNWSRRELKVNYSIELICRLLHLLANV 120

Query: 146 KCYPKIRSFLDSFVKGETNCTISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTVLGL 205
           K YPKIRS LDSFVKGETNC+ISLIFH+LSVCSDQFCANSIIADMLVLAYV+NSKTVLGL
Sbjct: 121 KYYPKIRSVLDSFVKGETNCSISLIFHSLSVCSDQFCANSIIADMLVLAYVQNSKTVLGL 180

Query: 206 EAFKRAGDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRRKVSPNLITFNIVINGL 265
           EAFKRAGDY YKLSVLSCNPLLS+LVKE+EFGDVEFVYKEMIRRK+SPNLITFNIVINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKISPNLITFNIVINGL 240

Query: 266 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKMYKADAILKEMVANKVS 325
           CKVGKLNKAGDVIDDMKVWGFWPN VTYNTLIDGYCK+GRVGKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNAVTYNTLIDGYCKMGRVGKMYKADAILKEMVGNKVS 300

Query: 326 PNDVTFNILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVL 385
           PN VTFN+LIDGFCKDENVS ALKVFEEMQ QGLKPTVVTYNSLING+CNEGKLNE KVL
Sbjct: 301 PNIVTFNVLIDGFCKDENVSGALKVFEEMQSQGLKPTVVTYNSLINGMCNEGKLNEAKVL 360

Query: 386 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK 445
           LDEMLSSNLKPNVITYNALINGYCKKK LEEARELFDNIGKQGL PNVITFNTLLDGYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKKLEEARELFDNIGKQGLTPNVITFNTLLDGYCK 420

Query: 446 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVT 505
           CGKMEEAFLLQ +MLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEM+ RG+KADTVT
Sbjct: 421 CGKMEEAFLLQKVMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMECRGVKADTVT 480

Query: 506 YNILISAWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQME 565
           YNILISAWCEK+EPKKAARLIDEMLDRGL+P+HLTYNILLNG+CMEGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDRGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 566 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 625
           KE  WANVVTYNVLI GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK EMMEKGFLP
Sbjct: 541 KERIWANVVTYNVLILGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKVEMMEKGFLP 600

Query: 626 DIEGHLYQVS 636
           DIEGHLY  S
Sbjct: 601 DIEGHLYHAS 610

BLAST of Lsi11G006290 vs. NCBI nr
Match: XP_004144813.1 (pentatricopeptide repeat-containing protein At1g09820 [Cucumis sativus] >XP_031736876.1 pentatricopeptide repeat-containing protein At1g09820 [Cucumis sativus] >KGN61033.2 hypothetical protein Csa_021337 [Cucumis sativus])

HSP 1 Score: 1136.7 bits (2939), Expect = 0.0e+00
Identity = 553/611 (90.51%), Postives = 581/611 (95.09%), Query Frame = 0

Query: 26  MNVIIRLSSASIIFPAKIDRKYFFSTTHLPFCAYNSTCTAPTANDFDPLIISDLISRQQW 85
           MNVIIR SSAS IFPAKIDR   FSTTHLPFC YN TCTAP +NDFDPLIISDLISRQQW
Sbjct: 1   MNVIIRHSSASRIFPAKIDRNCIFSTTHLPFCTYNPTCTAPISNDFDPLIISDLISRQQW 60

Query: 86  SNLKSHLKFKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELLCRLLILLANA 145
           S LKSH+KFKSPIDFLHQL+GSG VDPLLVLRYFNWS++EL VNY+IEL+CRLL LLANA
Sbjct: 61  SILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIELICRLLNLLANA 120

Query: 146 KCYPKIRSFLDSFVKGETNCTISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTVLGL 205
           K YPKIRS LDSFVKGETNC+ISLIFH+LSVCS QFCANSIIADMLVLAYV+NSKTVLGL
Sbjct: 121 KHYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGL 180

Query: 206 EAFKRAGDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRRKVSPNLITFNIVINGL 265
           EAFKRAGDY YKLSVLSCNPLLS+LVKENEFG VEFVYKEMIRRK+SPNLITFN VINGL
Sbjct: 181 EAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGL 240

Query: 266 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKMYKADAILKEMVANKVS 325
           CKVGKLNKAGDV+DDMKVWGFWPNVVTYNTLIDGYCK+GRVGKMYKADAILKEMV NKVS
Sbjct: 241 CKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVS 300

Query: 326 PNDVTFNILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVL 385
           PN VTFN+LIDGFCKDEN+SAALKVFEEMQ QGLKPTVVTYNSL+NGLCNEGKLNE KVL
Sbjct: 301 PNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVL 360

Query: 386 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK 445
           LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL PNVITFNTLL GYCK
Sbjct: 361 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCK 420

Query: 446 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVT 505
            GKMEEAFLLQ +MLEKGFLP+ STYNCLIVGFCREGKMEEVKNLLNEM+ RG+KADTVT
Sbjct: 421 FGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVT 480

Query: 506 YNILISAWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQME 565
           YNILISAWCEK+EPKKAARLIDEMLD+GL+P+HLTYNILLNG+CMEGNLRAALN+RKQME
Sbjct: 481 YNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQME 540

Query: 566 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 625
           KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP
Sbjct: 541 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 600

Query: 626 DIEGHLYQVSR 637
           DIEGHLY  S+
Sbjct: 601 DIEGHLYHASQ 611

BLAST of Lsi11G006290 vs. NCBI nr
Match: XP_022156382.1 (pentatricopeptide repeat-containing protein At1g09820 [Momordica charantia] >XP_022156383.1 pentatricopeptide repeat-containing protein At1g09820 [Momordica charantia])

HSP 1 Score: 1130.5 bits (2923), Expect = 0.0e+00
Identity = 552/611 (90.34%), Postives = 579/611 (94.76%), Query Frame = 0

Query: 26  MNVIIRLSSASIIFPAKIDRKYFFSTTHLPFCAYNSTCTAPTANDFDPLIISDLISRQQW 85
           MN + RL     IFPAKIDRKY FSTTH P C YNST TA ++NDFDP IIS+LISRQQW
Sbjct: 1   MNAVNRLPWR--IFPAKIDRKYIFSTTHPPLCTYNSTSTASSSNDFDPQIISELISRQQW 60

Query: 86  SNLKSHLKFKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELLCRLLILLANA 145
           SNLKSH KFKSPIDFLH LLGSGAVDPLLVLRYFNWSQKELKVNY+IEL CRLL LLANA
Sbjct: 61  SNLKSHFKFKSPIDFLHLLLGSGAVDPLLVLRYFNWSQKELKVNYSIELFCRLLNLLANA 120

Query: 146 KCYPKIRSFLDSFVKGETNCTISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTVLGL 205
           KCYPKIRSFLDSFVKGETNCTISLIF+TLSVC DQFCANSIIADMLVLAYVKNSKT LGL
Sbjct: 121 KCYPKIRSFLDSFVKGETNCTISLIFYTLSVCGDQFCANSIIADMLVLAYVKNSKTSLGL 180

Query: 206 EAFKRAGDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRRKVSPNLITFNIVINGL 265
           EAFKR+GDYGYKLSVLSCNPLLS+LVKE+EFGDVEFVYKEMIRRKVSPNLITFNIVINGL
Sbjct: 181 EAFKRSGDYGYKLSVLSCNPLLSALVKESEFGDVEFVYKEMIRRKVSPNLITFNIVINGL 240

Query: 266 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKMYKADAILKEMVANKVS 325
           CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCK+GRVGKMYKADAILKEMVANKVS
Sbjct: 241 CKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVANKVS 300

Query: 326 PNDVTFNILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVL 385
           PNDVTFNILIDGFCKDEN+SAALKVFEEM+ QGLKP+VVTYNSLINGLCNEGKLNE   L
Sbjct: 301 PNDVTFNILIDGFCKDENISAALKVFEEMRIQGLKPSVVTYNSLINGLCNEGKLNEANTL 360

Query: 386 LDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK 445
           LDEM +SNLKPNV+TYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK
Sbjct: 361 LDEMSNSNLKPNVVTYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCK 420

Query: 446 CGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVT 505
           CGKM+EAFLL++LMLEKG  PDVSTYNCLIVGFC+EGKMEEV+NLLNEM+ RGLKAD VT
Sbjct: 421 CGKMDEAFLLRSLMLEKGLPPDVSTYNCLIVGFCKEGKMEEVENLLNEMEERGLKADLVT 480

Query: 506 YNILISAWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQME 565
           YNILISAWCEKREPKKAA LIDEM  RGL+P+HLTYNILLNG+C+EGNLRAALNVRKQME
Sbjct: 481 YNILISAWCEKREPKKAAGLIDEMFHRGLRPSHLTYNILLNGYCIEGNLRAALNVRKQME 540

Query: 566 KEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLP 625
           K+GRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII+EEMMEKGFLP
Sbjct: 541 KDGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIREEMMEKGFLP 600

Query: 626 DIEGHLYQVSR 637
           DIEGHLYQVSR
Sbjct: 601 DIEGHLYQVSR 609

BLAST of Lsi11G006290 vs. TAIR 10
Match: AT1G09820.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 683.3 bits (1762), Expect = 1.8e-196
Identity = 333/581 (57.31%), Postives = 433/581 (74.53%), Query Frame = 0

Query: 57  CAYNSTCT-APTANDFDPLIISDLISRQQWSNLKSHLKFKSPIDFLHQLLGSGAVDPLLV 116
           C+ +ST T +P    +D  +I+DLI +Q WS L  H+   +P +   QL+ S  +DP L 
Sbjct: 26  CSSSSTITGSPCPPRYDVAVIADLIEKQHWSKLGVHVTDINPNELFRQLI-SSELDPDLC 85

Query: 117 LRYFNWSQKELKVNYNIELLCRLLILLANAKCYPKIRSFLDSFVKGETNCTISLIFHTLS 176
           LRY++W  K   ++ ++EL  +LL  LANAK Y KIRSFLD FV+  ++  +  IFH +S
Sbjct: 86  LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 145

Query: 177 VCSDQFCANSIIADMLVLAYVKNSKTVLGLEAFKRAGDYGYKLSVLSCNPLLSSLVKENE 236
           +C D  C NSIIADMLVLAY  NS+  LG EAFKR+G YGYKLS LSC PL+ +L+KEN 
Sbjct: 146 MC-DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 205

Query: 237 FGDVEFVYKEMIRRKVSPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPNVVTYNT 296
             DVE+VYKEMIRRK+ PN+ TFN+VIN LCK GK+NKA DV++DMKV+G  PNVV+YNT
Sbjct: 206 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 265

Query: 297 LIDGYCKIGRVGKMYKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALKVFEEMQ 356
           LIDGYCK+G  GKMYKADA+LKEMV N VSPN  TFNILIDGF KD+N+  ++KVF+EM 
Sbjct: 266 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 325

Query: 357 GQGLKPTVVTYNSLINGLCNEGKLNEGKVLLDEMLSSNLKPNVITYNALINGYCKKKLLE 416
            Q +KP V++YNSLINGLCN GK++E   + D+M+S+ ++PN+ITYNALING+CK  +L+
Sbjct: 326 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 385

Query: 417 EARELFDNIGKQGLAPNVITFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLI 476
           EA ++F ++  QG  P    +N L+D YCK GK+++ F L+  M  +G +PDV TYNCLI
Sbjct: 386 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 445

Query: 477 VGFCREGKMEEVKNLLNEMKRRGLKADTVTYNILISAWCEKREPKKAARLIDEMLDRGLQ 536
            G CR G +E  K L +++  +GL  D VT++IL+  +C K E +KAA L+ EM   GL+
Sbjct: 446 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 505

Query: 537 PTHLTYNILLNGHCMEGNLRAALNVRKQMEKEGRW-ANVVTYNVLIQGYCRKGKLEDANG 596
           P HLTYNI++ G+C EGNL+AA N+R QMEKE R   NV +YNVL+QGY +KGKLEDAN 
Sbjct: 506 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 565

Query: 597 LLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLYQVS 636
           LLNEMLEKGL+PNR TYEI+KEEM+++GF+PDIEGHL+ VS
Sbjct: 566 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVS 603

BLAST of Lsi11G006290 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 335.5 bits (859), Expect = 9.3e-92
Identity = 191/561 (34.05%), Postives = 294/561 (52.41%), Query Frame = 0

Query: 91  HLKFKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNIELLCRLLILLANAKCYPK 150
           HL      +    LL     D  L+L++ NW+       + +   C  L +L   K Y K
Sbjct: 41  HLSANFTPEAASNLLLKSQNDQALILKFLNWANPH--QFFTLRCKCITLHILTKFKLY-K 100

Query: 151 IRSFLDSFVKGET--NCTISLIFHTLSVCSDQFCANSIIADMLVLAYVKNSKTVLGLEAF 210
               L   V  +T  +   SL+F +L    D   + S + D++V +Y + S     L   
Sbjct: 101 TAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIV 160

Query: 211 KRAGDYGYKLSVLSCNPLLSSLVK-ENEFGDVEFVYKEMIRRKVSPNLITFNIVINGLCK 270
             A  +G+   VLS N +L + ++ +      E V+KEM+  +VSPN+ T+NI+I G C 
Sbjct: 161 HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCF 220

Query: 271 VGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRV--------------------- 330
            G ++ A  + D M+  G  PNVVTYNTLIDGYCK+ ++                     
Sbjct: 221 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 280

Query: 331 -----------GKMYKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALKVFEEMQ 390
                      G+M +   +L EM     S ++VT+N LI G+CK+ N   AL +  EM 
Sbjct: 281 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 340

Query: 391 GQGLKPTVVTYNSLINGLCNEGKLNEGKVLLDEMLSSNLKPNVITYNALINGYCKKKLLE 450
             GL P+V+TY SLI+ +C  G +N     LD+M    L PN  TY  L++G+ +K  + 
Sbjct: 341 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 400

Query: 451 EARELFDNIGKQGLAPNVITFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLI 510
           EA  +   +   G +P+V+T+N L++G+C  GKME+A  +   M EKG  PDV +Y+ ++
Sbjct: 401 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 460

Query: 511 VGFCREGKMEEVKNLLNEMKRRGLKADTVTYNILISAWCEKREPKKAARLIDEMLDRGLQ 570
            GFCR   ++E   +  EM  +G+K DT+TY+ LI  +CE+R  K+A  L +EML  GL 
Sbjct: 461 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 520

Query: 571 PTHLTYNILLNGHCMEGNLRAALNVRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGL 617
           P   TY  L+N +CMEG+L  AL +  +M ++G   +VVTY+VLI G  ++ +  +A  L
Sbjct: 521 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 580

BLAST of Lsi11G006290 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 310.5 bits (794), Expect = 3.2e-84
Identity = 188/606 (31.02%), Postives = 321/606 (52.97%), Query Frame = 0

Query: 76  ISDLISRQQWSNLKSHLK---FKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNI 135
           I+++I  ++   L+  LK    K   D L  +L     D  LVL +F+W++   + + N+
Sbjct: 62  ITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARS--RRDSNL 121

Query: 136 ELLCRLLILLANAKCYPKIRSFLDSF-VKGETNCTISLI--FHTLSVCSDQFCANSIIAD 195
           E LC ++ L   +K     +S + SF  + + N T S +  F  L      + ++  + D
Sbjct: 122 ESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFD 181

Query: 196 MLVLAYVKNSKTVLGLEAFKRAGDYGYKLSVLSCNPLLSSLVKE-NEFGDVEFVYKEMIR 255
           +     V           F++  +YG  LSV SCN  L+ L K+  +      V++E   
Sbjct: 182 VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE 241

Query: 256 RKVSPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGK 315
             V  N+ ++NIVI+ +C++G++ +A  ++  M++ G+ P+V++Y+T+++GYC+ G + K
Sbjct: 242 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 301

Query: 316 MYKADAILK--------------------------------EMVANKVSPNDVTFNILID 375
           ++K   ++K                                EM+   + P+ V +  LID
Sbjct: 302 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 361

Query: 376 GFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVLLDEMLSSNLKP 435
           GFCK  ++ AA K F EM  + + P V+TY ++I+G C  G + E   L  EM    L+P
Sbjct: 362 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 421

Query: 436 NVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCKCGKMEEAFLLQ 495
           + +T+  LINGYCK   +++A  + +++ + G +PNV+T+ TL+DG CK G ++ A  L 
Sbjct: 422 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 481

Query: 496 NLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVTYNILISAWCEK 555
           + M + G  P++ TYN ++ G C+ G +EE   L+ E +  GL ADTVTY  L+ A+C+ 
Sbjct: 482 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 541

Query: 556 REPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQMEKEGRWANVVTY 615
            E  KA  ++ EML +GLQPT +T+N+L+NG C+ G L     +   M  +G   N  T+
Sbjct: 542 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 601

Query: 616 NVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE-IIK-----EEMMEKGFL-PDIEG 636
           N L++ YC +  L+ A  +  +M  +G+ P+  TYE ++K       M E  FL  +++G
Sbjct: 602 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 661

BLAST of Lsi11G006290 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 310.5 bits (794), Expect = 3.2e-84
Identity = 188/606 (31.02%), Postives = 321/606 (52.97%), Query Frame = 0

Query: 76  ISDLISRQQWSNLKSHLK---FKSPIDFLHQLLGSGAVDPLLVLRYFNWSQKELKVNYNI 135
           I+++I  ++   L+  LK    K   D L  +L     D  LVL +F+W++   + + N+
Sbjct: 62  ITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARS--RRDSNL 121

Query: 136 ELLCRLLILLANAKCYPKIRSFLDSF-VKGETNCTISLI--FHTLSVCSDQFCANSIIAD 195
           E LC ++ L   +K     +S + SF  + + N T S +  F  L      + ++  + D
Sbjct: 122 ESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFD 181

Query: 196 MLVLAYVKNSKTVLGLEAFKRAGDYGYKLSVLSCNPLLSSLVKE-NEFGDVEFVYKEMIR 255
           +     V           F++  +YG  LSV SCN  L+ L K+  +      V++E   
Sbjct: 182 VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE 241

Query: 256 RKVSPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGK 315
             V  N+ ++NIVI+ +C++G++ +A  ++  M++ G+ P+V++Y+T+++GYC+ G + K
Sbjct: 242 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 301

Query: 316 MYKADAILK--------------------------------EMVANKVSPNDVTFNILID 375
           ++K   ++K                                EM+   + P+ V +  LID
Sbjct: 302 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 361

Query: 376 GFCKDENVSAALKVFEEMQGQGLKPTVVTYNSLINGLCNEGKLNEGKVLLDEMLSSNLKP 435
           GFCK  ++ AA K F EM  + + P V+TY ++I+G C  G + E   L  EM    L+P
Sbjct: 362 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 421

Query: 436 NVITYNALINGYCKKKLLEEARELFDNIGKQGLAPNVITFNTLLDGYCKCGKMEEAFLLQ 495
           + +T+  LINGYCK   +++A  + +++ + G +PNV+T+ TL+DG CK G ++ A  L 
Sbjct: 422 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 481

Query: 496 NLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKNLLNEMKRRGLKADTVTYNILISAWCEK 555
           + M + G  P++ TYN ++ G C+ G +EE   L+ E +  GL ADTVTY  L+ A+C+ 
Sbjct: 482 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 541

Query: 556 REPKKAARLIDEMLDRGLQPTHLTYNILLNGHCMEGNLRAALNVRKQMEKEGRWANVVTY 615
            E  KA  ++ EML +GLQPT +T+N+L+NG C+ G L     +   M  +G   N  T+
Sbjct: 542 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 601

Query: 616 NVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE-IIK-----EEMMEKGFL-PDIEG 636
           N L++ YC +  L+ A  +  +M  +G+ P+  TYE ++K       M E  FL  +++G
Sbjct: 602 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 661

BLAST of Lsi11G006290 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 303.5 bits (776), Expect = 3.9e-82
Identity = 149/439 (33.94%), Postives = 259/439 (59.00%), Query Frame = 0

Query: 190 MLVLAYVKNSKTVLGLEAFKRAGDYGYKLSVLSCNPLLSSLVKENEFGDVEFVYKEMIRR 249
           +++  Y +  K +       RA   GY+   ++ + L++    E    +   +   M+  
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 250 KVSPNLITFNIVINGLCKVGKLNKAGDVIDDMKVWGFWPNVVTYNTLIDGYCKIGRVGKM 309
           K  P+L+T + +INGLC  G++++A  +ID M  +GF P+ VTY  +++  CK G     
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA-- 229

Query: 310 YKADAILKEMVANKVSPNDVTFNILIDGFCKDENVSAALKVFEEMQGQGLKPTVVTYNSL 369
             A  + ++M    +  + V ++I+ID  CKD +   AL +F EM+ +G+K  VVTY+SL
Sbjct: 230 -LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 289

Query: 370 INGLCNEGKLNEGKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGL 429
           I GLCN+GK ++G  +L EM+  N+ P+V+T++ALI+ + K+  L EA+EL++ +  +G+
Sbjct: 290 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 349

Query: 430 APNVITFNTLLDGYCKCGKMEEAFLLQNLMLEKGFLPDVSTYNCLIVGFCREGKMEEVKN 489
           AP+ IT+N+L+DG+CK   + EA  + +LM+ KG  PD+ TY+ LI  +C+  ++++   
Sbjct: 350 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 409

Query: 490 LLNEMKRRGLKADTVTYNILISAWCEKREPKKAARLIDEMLDRGLQPTHLTYNILLNGHC 549
           L  E+  +GL  +T+TYN L+  +C+  +   A  L  EM+ RG+ P+ +TY ILL+G C
Sbjct: 410 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 469

Query: 550 MEGNLRAALNVRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRT 609
             G L  AL + ++M+K      +  YN++I G C   K++DA  L   + +KG+ P+  
Sbjct: 470 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 529

Query: 610 TYEIIKEEMMEKGFLPDIE 629
           TY ++   + +KG L + +
Sbjct: 530 TYNVMIGGLCKKGSLSEAD 545

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O045042.6e-19557.31Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX... [more]
Q9FIX31.3e-9034.05Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Q0WVK74.5e-8331.02Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Q6NQ835.5e-8133.94Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
Q9CAN03.6e-8034.22Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A5D3BCX20.0e+0091.15Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5A7U3230.0e+0091.15Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BXE00.0e+0091.15pentatricopeptide repeat-containing protein At1g09820 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1DRY00.0e+0090.34pentatricopeptide repeat-containing protein At1g09820 OS=Momordica charantia OX=... [more]
A0A6J1FI860.0e+0088.10pentatricopeptide repeat-containing protein At1g09820 OS=Cucurbita moschata OX=3... [more]
Match NameE-valueIdentityDescription
XP_038891207.10.0e+0093.45pentatricopeptide repeat-containing protein At1g09820 [Benincasa hispida][more]
TYJ96471.10.0e+0091.15pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_008453581.10.0e+0091.15PREDICTED: pentatricopeptide repeat-containing protein At1g09820 [Cucumis melo] ... [more]
XP_004144813.10.0e+0090.51pentatricopeptide repeat-containing protein At1g09820 [Cucumis sativus] >XP_0317... [more]
XP_022156382.10.0e+0090.34pentatricopeptide repeat-containing protein At1g09820 [Momordica charantia] >XP_... [more]
Match NameE-valueIdentityDescription
AT1G09820.11.8e-19657.31Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G39710.19.3e-9234.05Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G05670.13.2e-8431.02Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G05670.23.2e-8431.02Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT3G22470.13.9e-8233.94Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 424..495
e-value: 5.8E-24
score: 86.7
coord: 496..566
e-value: 2.4E-20
score: 74.8
coord: 567..628
e-value: 5.1E-13
score: 50.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 311..423
e-value: 5.2E-41
score: 143.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 111..310
e-value: 1.3E-28
score: 102.3
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 532..565
e-value: 1.1E-8
score: 34.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 540..568
e-value: 5.4E-6
score: 24.2
coord: 222..254
e-value: 4.4E-6
score: 24.5
coord: 291..327
e-value: 1.1E-6
score: 26.5
coord: 574..607
e-value: 3.7E-10
score: 37.3
coord: 470..502
e-value: 1.2E-9
score: 35.8
coord: 364..398
e-value: 1.2E-9
score: 35.8
coord: 504..537
e-value: 3.2E-8
score: 31.3
coord: 399..433
e-value: 5.4E-9
score: 33.7
coord: 434..468
e-value: 5.3E-10
score: 36.9
coord: 256..288
e-value: 4.7E-7
score: 27.6
coord: 329..363
e-value: 3.2E-10
score: 37.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 222..250
e-value: 0.27
score: 11.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 396..445
e-value: 1.3E-18
score: 67.0
coord: 326..375
e-value: 8.7E-20
score: 70.7
coord: 572..614
e-value: 6.4E-15
score: 55.1
coord: 466..514
e-value: 5.7E-18
score: 64.9
coord: 254..302
e-value: 9.9E-17
score: 60.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 572..606
score: 14.600509
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 432..466
score: 13.350921
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 219..253
score: 9.437737
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 502..536
score: 13.208424
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 537..571
score: 9.613118
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 289..326
score: 11.586152
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 327..361
score: 13.153618
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 254..288
score: 11.542307
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 397..431
score: 13.526301
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 467..501
score: 13.526301
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 362..396
score: 12.945353
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 67..631
NoneNo IPR availablePANTHERPTHR47932:SF2OS10G0484300 PROTEINcoord: 67..631

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G006290.1Lsi11G006290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding