Lsi11G005380 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G005380
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Cyclin
Location	chr11: 5637679 .. 5640282 (-)
RNA-Seq Expression	Lsi11G005380
Synteny	Lsi11G005380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGAAAGAATAAAAATAGATTAAAGCTACTTTATTCATATTCCTCTCTAATATTCCCAAGAAATGAACCAAACCAGAATCATGAGAAATTGCTGTCTACAGGCCAAAGTTATGAATAAGCTTGTTTTGAAACCAACTTTCTCTTTCTCTGCTCATGAAGAACTGCCTAGCTTTTCTGCCTGTACAAGTCAAGTATGCTCAAGCAATAAAGATTGAGAAGGTTATTGAAGAAGCTCTAAGTTGTAAGCCCCTTTTACTGGTGCATTTCAGGCATTTTATGTCCTTTTTTCTTCCTAGGTTTACCCAAAGTTTCCTGCCTTGGGTCTGTGAGCCACTTTTGTATACAGTTTTCCTCTGATTTTCTTTAAGATCATCTCCTCTTTGTTGTTCTTCGAAGTACATGATCAGTTGCCTCCAGAACTTGATTTTCTTCAAATAATTCTAGGTAAGATTTAGCTTCTTTTTCCATTTGAGTTTGAGATATTTTCTGATGGAATGAATCAATAGTTCATAAGCTATTATTTTAGAGTTAAAGAGGAAATTTCTCATCTGATATTGTTGTTAGAATCATTTAAATTTGTAATAACATAAACTGATCTGTTGGTCTGCTCGTATCGGATTCTGAAACCCAATTAAACCTCTTTCCCTTCTATTTTCTAAGAAACCTTCCCCCTTTTCTTCCCTTTCAAGTTATTGTCAATGTGAATCAATTGGTGGGGCGTCTCATTTGTTTACCTGCAAAACGTCTTGCTTCTGTACCAGGCTAAAGAACCATGTTTATCCTTTGTCGCCGTTTTTCTTATCTCTATGATTCAAATTTCTGAATAAAGTTTTAAGGAATATATGCAGCTTTAGAACCTGGCTTTTGAATCTGTTGGAAAATAGTCTATATACCTTGCAATAATGTAGGTTCTAGTATCAGATTAAGAAGGGACCCACTGGTATTATTAGATTGTTTCTTTACCATTCACTATGGATTATGTATGAATTAAAGTAAATAAGATTTGTGTATATGCAGGTCTAGATAAACATGAGAGAAATGGCAGATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAACTTATACCGAGCTCTCCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTTGAGACGTCGATTCAGAAAAACGAAAAGTTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACTATTTTCCATGGTTCCCGAGCTCCCACCATGAGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGCACTTCCTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAGATGGATGCTTACCTAACTAATTTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCGAAGTTTATCGATGCCGGGTAAGTTCTAATGTCGCTTAGTTACCGTGGCCCTGTTGTAATTCACTTAACATGAAAAGATTTCGAGCTTGGTTAATATTCTGCAGTTTAGTTTTTTCAGTTCACACCACACTAACTTTATTTCAGTTGCCTTCCCGTTCATCCATTGAACTGAGATCATGAGGAGGAATCCATAAGTTCAAGTTTATATAGCTGACATTTTTTTCAGTGAAAAATGAGCTAAATATATGATTCAATCCCTCATGTTTGGTTCATTTTTCAAATTTGTCCATAATCTAGAGGTTTCTGATTTTCTGTTCCTTTAACAAGTCTTCGTTTTATCACAAAAATGTTAAAATTTATAGATGAAGAACTGATGTCGAAATACACTCACGCTCACACTCACACGGCTTAGGTATACATTGTTCTTCTTTTAAAGTTAAATAGTGCTAAGTACTTGATTGAAACAATTCCATGTATAAAAGACAAAATTGAAAATTTTAAATGATTCTATACAAAATGTAATAGTGACTCAAACACTGCTTAGAAAGATATCAACAACCAGAGACCTTTTGTTCGATGCTGCTATATCGATATCGTGCATCTGATCTGTCATATTTCGAGATCCCTGAAAATTTTCTTCCAATTTCTTGGATGTTATAAAAATACTTTTTATGTATACACAACTTAATGTGTTAAGATGCTATGCAATGCAGATGCTATAACAATACTTTTTATGCCAAAGTTGGAGGAGTGAGCACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGATGTTTTCAGTACTCACTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGTGGAGAATCAAGCCGATCGTCGAGCCGGTAACAAAGCTCGAACTAAATGTTTACCTCAAATTACAGGCTACACTTGCAGTGCCATTTGAAATCACTTGGGGAATCTCTCTTTCTTAAATTTTCATGGTTAGTTTAGTGTTCAATCTCTGGAGTTGTATGAAATATTATTATAAAGCTTCAATTTTTTAGACTAAATACTGAAAGTAAGAAGTTCTTCCTACTAGGAAGATGATGGGAGAGATTCAATGAAAGATGTTTCCAGTGAACTGGAAATTTTTTATAATTCAATAATGATCGTTAGATTTTAGATGTTTAA

mRNA sequence

AAAGGAAAGAATAAAAATAGATTAAAGCTACTTTATTCATATTCCTCTCTAATATTCCCAAGAAATGAACCAAACCAGAATCATGAGAAATTGCTGTCTACAGGCCAAAGTTATGAATAAGCTTGTTTTGAAACCAACTTTCTCTTTCTCTGCTCATGAAGAACTGCCTAGCTTTTCTGCCTGTACAAGTCAAGTATGCTCAAGCAATAAAGATTGAGAAGGTTATTGAAGAAGCTCTAAGTTGTAAGCCCCTTTTACTGGTGCATTTCAGGCATTTTATGTCCTTTTTTCTTCCTAGGTTTACCCAAAGTTTCCTGCCTTGGGTCTGTGAGCCACTTTTGTATACAGTTTTCCTCTGATTTTCTTTAAGATCATCTCCTCTTTGTTGTTCTTCGAAGTACATGATCAGTTGCCTCCAGAACTTGATTTTCTTCAAATAATTCTAGGTCTAGATAAACATGAGAGAAATGGCAGATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAACTTATACCGAGCTCTCCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTTGAGACGTCGATTCAGAAAAACGAAAAGTTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACTATTTTCCATGGTTCCCGAGCTCCCACCATGAGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGCACTTCCTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAGATGGATGCTTACCTAACTAATTTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCGAAGTTTATCGATGCCGGATGCTATAACAATACTTTTTATGCCAAAGTTGGAGGAGTGAGCACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGATGTTTTCAGTACTCACTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGTGGAGAATCAAGCCGATCGTCGAGCCGGTAACAAAGCTCGAACTAAATGTTTACCTCAAATTACAGGCTACACTTGCAGTGCCATTTGAAATCACTTGGGGAATCTCTCTTTCTTAAATTTTCATGGTTAGTTTAGTGTTCAATCTCTGGAGTTGTATGAAATATTATTATAAAGCTTCAATTTTTTAGACTAAATACTGAAAGTAAGAAGTTCTTCCTACTAGGAAGATGATGGGAGAGATTCAATGAAAGATGTTTCCAGTGAACTGGAAATTTTTTATAATTCAATAATGATCGTTAGATTTTAGATGTTTAA

Coding sequence (CDS)

ATGAGAGAAATGGCAGATAATGGTATGGATTTTCAAGTAGAAACAGATTCACTTCTTGGACTGAGTGAATCTGGGAAACTTATACCGAGCTCTCCTCGAGTGTTGTCGATTCTTTCCTCTGTTTTTGAGACGTCGATTCAGAAAAACGAAAAGTTATTGAAAAGACTCAAAAAGAAAGACAGTGTTACTATTTTCCATGGTTCCCGAGCTCCCACCATGAGCATTGGACAATATATCGATCGCATCTTGAAGTACACATGTTGTGGCACTTCCTGCTTAGTTGTTGCCTACATATACATTGAAAGGTATCTTCAAAAGATGGATGCTTACCTAACTAATTTGAACATCCACCGCCTTCTGATCACCAGCATCATGGTTGCAGCGAAGTTTATCGATGCCGGATGCTATAACAATACTTTTTATGCCAAAGTTGGAGGAGTGAGCACAAAAGAAATGAACAGCTTGGAGATAGAATTTCTGTTCAATTTGGACTTCAGACTTCATGTCACTGCTGATGTTTTCAGTACTCACTGTTTGCAGCTCCAAAAGGAAGTTCTTGGGGTGGAGAATCAAGCCGATCGTCGAGCCGGTAACAAAGCTCGAACTAAATGTTTACCTCAAATTACAGGCTACACTTGCAGTGCCATTTGA

Protein sequence

MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI

Homology

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BLAST of Lsi11G005380 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.7e-47
Identity = 99/210 (47.14%), Postives = 135/210 (64.29%), Query Frame = 0


Query: 19  LGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQY 78
           L +S+S K     P+VL +L++  + S+QKNE LL   K KDS TIFHG RAP +SI  Y
Sbjct: 23  LTVSQSKKNNTEYPKVLLLLAAYLDRSVQKNEDLLDSNKIKDSSTIFHGHRAPDLSIKLY 82

Query: 79  IDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNN 138
            +RI KY+ C  SC V+A IY+ERYLQ+   Y+T+L++HRLLITS++VAAKF D   +NN
Sbjct: 83  AERIFKYSECSPSCFVLALIYMERYLQQPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNN 142

Query: 139 TFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVL------------ 198
            FYA+VGG+ST EMN LE++ LFNLDFRL V  + F ++CLQL+KE +            
Sbjct: 143 AFYARVGGISTVEMNRLELDLLFNLDFRLKVDLETFGSYCLQLEKETMVLVIDRPIQQVH 202

Query: 199 GVENQADRRAGNKARTKCLPQITGYTCSAI 217
           GV +  D    +     C  ++  Y+  A+
Sbjct: 203 GVNSTKDLSRNSSIDESCKSELMRYSSQAL 232

[Close]

BLAST of Lsi11G005380 vs. ExPASy Swiss-Prot
Match: Q8LB60 (Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 2.7e-40
Identity = 84/166 (50.60%), Postives = 109/166 (65.66%), Query Frame = 0


Query: 19  LGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQY 78
           LGL   GK +   P VLS LSS  E S+  N      L   DSVT+F G   P +SI  Y
Sbjct: 19  LGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHY 78

Query: 79  IDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNN 138
           +DRI KY+CC  SC V+A+IYI+ +L K  A L  LN+HRL+IT++M+AAK  D   +NN
Sbjct: 79  LDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFDDRYFNN 138

Query: 139 TFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKE 185
            +YA+VGGV+T+E+N LE+E LF LDF+L V    F THC QL+K+
Sbjct: 139 AYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ 184

[Close]

BLAST of Lsi11G005380 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.4e-36
Identity = 77/158 (48.73%), Postives = 110/158 (69.62%), Query Frame = 0


Query: 30  SSPRVLSILSSVFETSIQKNEKLLKRLKK-KDSVTIFHGSRAPTMSIGQYIDRILKYTCC 89
           ++PRVL+I+S V E  + +NE L K+ K    S+  FHG RAP++SI +Y++RI KYT C
Sbjct: 23  ATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKC 82

Query: 90  GTSCLVVAYIYIERYLQKMDAYL-TNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGV 149
             +C VV Y+YI+R   K    L  +LN+HRLL+T +M+AAK +D   YNN FYA+VGGV
Sbjct: 83  SPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGV 142

Query: 150 STKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV 186
           S  ++N +E+E LF LDFR+ V+  VF ++C  L+KE+
Sbjct: 143 SNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEM 180

[Close]

BLAST of Lsi11G005380 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.9e-35
Identity = 71/154 (46.10%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 33  RVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQYIDRILKYTCCGTSC 92
           ++++ LSS+ E   + N+   +   +   V++FHG   PT++I  Y++RI KY  C  SC
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  LVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKE 152
            VVAY+Y++R+  +  +  + + N+HRLLITS+MVAAKF+D   YNN +YAKVGG+STKE
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 MNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV 186
           MN LE++FLF L F L+VT + F+ +   LQKE+
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEM 165

[Close]

BLAST of Lsi11G005380 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-34
Identity = 66/156 (42.31%), Postives = 110/156 (70.51%), Query Frame = 0


Query: 32  PRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQYIDRILKYTCCGTS 91
           P V++ +SS+ +   + N+ L +  ++   ++ F+    P++SI  Y++RI KY  C  S
Sbjct: 21  PNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSDS 80

Query: 92  CLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTK 151
           C +VAYIY++R++QK     + + N+HRL+ITS++V+AKF+D  CYNN FYAKVGG++T+
Sbjct: 81  CYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGITTE 140

Query: 152 EMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVL 187
           EMN LE++FLF + F+L+VT   ++ +C  LQ+E++
Sbjct: 141 EMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMV 176

[Close]

BLAST of Lsi11G005380 vs. ExPASy TrEMBL
Match: A0A0A0LJL5 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_2G021730 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107
Identity = 200/216 (92.59%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKD 60
           MREMA+NGMDFQVETDSLLGLSESGKLI SSP+VLSILSSVFE  IQKNEKLLKRLKKKD
Sbjct: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120
           SVTIFH SRAPTM IGQYIDRILKYTCCGT+CLVVAYIYIERYLQK D YLT+LN+HRLL
Sbjct: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           LQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Lsi11G005380 vs. ExPASy TrEMBL
Match: A0A1S3C004 (cyclin-P3-1 OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.0e-107
Identity = 198/216 (91.67%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKD 60
           MREMA+N MDFQVETDSLLGLSESGKLI SSP+VLSILSSVFE SIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120
           +VTIFH SRAPTM IGQYIDRILKYTCCGT+CL+VAYIYIERYLQKMD YLT+LN+HRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           LQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Lsi11G005380 vs. ExPASy TrEMBL
Match: A6YTD1 (Cyclin-dependent kinase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 6.0e-107
Identity = 198/216 (91.67%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKD 60
           MREMA+N MDFQVETDSLLGLSESGKLI SSP+VLSILSSVFE SIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120
           +VTIFH SRAPTM IGQYIDRILKYTCCGT+CL+VAYIYIERYLQKMD YLT+LN+HRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           LQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Lsi11G005380 vs. ExPASy TrEMBL
Match: A0A5A7TWJ7 (Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00220 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.3e-105
Identity = 195/213 (91.55%), Postives = 203/213 (95.31%), Query Frame = 0


Query: 4   MADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVT 63
           MA+N MDFQVETDSLLGLSESGKLI SSP+VLSILSSVFE SIQKNEKLLKRLKKKD+VT
Sbjct: 1   MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT 60

Query: 64  IFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITS 123
           IFH SRAPTM IGQYIDRILKYTCCGT+CL+VAYIYIERYLQKMD YLT+LN+HRLLITS
Sbjct: 61  IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS 120

Query: 124 IMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 183
           IMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK
Sbjct: 121 IMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 180

Query: 184 EVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           EVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Sbjct: 181 EVLGGENQVERRPGNKARTKCLPQITGYTCSAI 213

[Close]

BLAST of Lsi11G005380 vs. ExPASy TrEMBL
Match: A0A6J1G2L7 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111450231 PE=3 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.3e-100
Identity = 190/216 (87.96%), Postives = 195/216 (90.28%), Query Frame = 0


Query: 1   MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKD 60
           MR+MADNG DFQVETDSLLGLSESGKLIPSS RVLSILSS FE SIQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120
           SVTIFHGSRAPTMS GQYIDRI KYTCCGT CLVVAYIYIERYLQKM AYLT+LN+HRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKF DAGCYNN FYAKVGGVSTKEMNS+EIE LFNLDFRLHVTADVF  HCLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           LQKE LG ENQ DRR GNK RT+CLPQI  YTC AI
Sbjct: 181 LQKEGLG-ENQIDRRPGNKTRTRCLPQIASYTCRAI 215

[Close]

BLAST of Lsi11G005380 vs. NCBI nr
Match: XP_038886918.1 (cyclin-P3-1 [Benincasa hispida] >XP_038886919.1 cyclin-P3-1 [Benincasa hispida] >XP_038886920.1 cyclin-P3-1 [Benincasa hispida] >XP_038886922.1 cyclin-P3-1 [Benincasa hispida] >XP_038886923.1 cyclin-P3-1 [Benincasa hispida])

HSP 1 Score: 402.9 bits (1034), Expect = 1.7e-108
Identity = 201/216 (93.06%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 1   MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKD 60
           MRE+ADNGMDFQVE DSLLGL ESGKLIPSSPRVLSILS+VFE SIQKNEKLLKRLKKKD
Sbjct: 1   MREVADNGMDFQVEIDSLLGLGESGKLIPSSPRVLSILSTVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120
           +VTIFHGSRAPTM IGQYIDRILKYTCCGT CLVVAYIYIERYLQKMDAYLTNLNIHRLL
Sbjct: 61  NVTIFHGSRAPTMGIGQYIDRILKYTCCGTPCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTAD+FS HCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADIFSNHCLQ 180

Query: 181 LQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           LQKE LG ENQ D RAGNK RTKCLPQITGYTCSAI
Sbjct: 181 LQKEALGGENQVDHRAGNKTRTKCLPQITGYTCSAI 216

[Close]

BLAST of Lsi11G005380 vs. NCBI nr
Match: XP_004139180.1 (cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648813.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648815.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648816.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_031737277.1 cyclin-P3-1 isoform X1 [Cucumis sativus] >KGN60902.1 hypothetical protein Csa_023421 [Cucumis sativus])

HSP 1 Score: 399.1 bits (1024), Expect = 2.5e-107
Identity = 200/216 (92.59%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKD 60
           MREMA+NGMDFQVETDSLLGLSESGKLI SSP+VLSILSSVFE  IQKNEKLLKRLKKKD
Sbjct: 1   MREMANNGMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFEKLIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120
           SVTIFH SRAPTM IGQYIDRILKYTCCGT+CLVVAYIYIERYLQK D YLT+LN+HRLL
Sbjct: 61  SVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLVVAYIYIERYLQKTDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           LQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGAENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Lsi11G005380 vs. NCBI nr
Match: XP_008454704.1 (PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454712.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454721.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454727.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454735.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_016901631.1 PREDICTED: cyclin-P3-1 [Cucumis melo] >ABR67416.1 cyclin-dependent kinase [Cucumis melo subsp. melo])

HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-106
Identity = 198/216 (91.67%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKD 60
           MREMA+N MDFQVETDSLLGLSESGKLI SSP+VLSILSSVFE SIQKNEKLLKRLKKKD
Sbjct: 1   MREMANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120
           +VTIFH SRAPTM IGQYIDRILKYTCCGT+CL+VAYIYIERYLQKMD YLT+LN+HRLL
Sbjct: 61  NVTIFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ
Sbjct: 121 ITSIMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180

Query: 181 LQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           LQKEVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Sbjct: 181 LQKEVLGGENQVERRPGNKARTKCLPQITGYTCSAI 216

[Close]

BLAST of Lsi11G005380 vs. NCBI nr
Match: KAA0047963.1 (cyclin-P3-1 [Cucumis melo var. makuwa] >TYK18312.1 cyclin-P3-1 [Cucumis melo var. makuwa])

HSP 1 Score: 391.0 bits (1003), Expect = 6.8e-105
Identity = 195/213 (91.55%), Postives = 203/213 (95.31%), Query Frame = 0


Query: 4   MADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVT 63
           MA+N MDFQVETDSLLGLSESGKLI SSP+VLSILSSVFE SIQKNEKLLKRLKKKD+VT
Sbjct: 1   MANNSMDFQVETDSLLGLSESGKLISSSPQVLSILSSVFERSIQKNEKLLKRLKKKDNVT 60

Query: 64  IFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITS 123
           IFH SRAPTM IGQYIDRILKYTCCGT+CL+VAYIYIERYLQKMD YLT+LN+HRLLITS
Sbjct: 61  IFHSSRAPTMGIGQYIDRILKYTCCGTACLIVAYIYIERYLQKMDVYLTSLNVHRLLITS 120

Query: 124 IMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 183
           IMVAAKF DAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK
Sbjct: 121 IMVAAKFTDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQK 180

Query: 184 EVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           EVLG ENQ +RR GNKARTKCLPQITGYTCSAI
Sbjct: 181 EVLGGENQVERRPGNKARTKCLPQITGYTCSAI 213

[Close]

BLAST of Lsi11G005380 vs. NCBI nr
Match: XP_022946012.1 (cyclin-P3-1-like [Cucurbita moschata] >XP_022946013.1 cyclin-P3-1-like [Cucurbita moschata] >XP_023521765.1 cyclin-P3-1-like [Cucurbita pepo subsp. pepo] >XP_023545675.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo] >XP_023545676.1 cyclin-P3-1 [Cucurbita pepo subsp. pepo] >KAG7030248.1 Cyclin-P3-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 372.9 bits (956), Expect = 1.9e-99
Identity = 190/216 (87.96%), Postives = 195/216 (90.28%), Query Frame = 0


Query: 1   MREMADNGMDFQVETDSLLGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKD 60
           MR+MADNG DFQVETDSLLGLSESGKLIPSS RVLSILSS FE SIQKNEKLLKRLKKKD
Sbjct: 1   MRKMADNGKDFQVETDSLLGLSESGKLIPSSSRVLSILSSTFERSIQKNEKLLKRLKKKD 60

Query: 61  SVTIFHGSRAPTMSIGQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLL 120
           SVTIFHGSRAPTMS GQYIDRI KYTCCGT CLVVAYIYIERYLQKM AYLT+LN+HRLL
Sbjct: 61  SVTIFHGSRAPTMSTGQYIDRISKYTCCGTPCLVVAYIYIERYLQKMGAYLTSLNVHRLL 120

Query: 121 ITSIMVAAKFIDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQ 180
           ITSIMVAAKF DAGCYNN FYAKVGGVSTKEMNS+EIE LFNLDFRLHVTADVF  HCLQ
Sbjct: 121 ITSIMVAAKFNDAGCYNNAFYAKVGGVSTKEMNSMEIELLFNLDFRLHVTADVFRAHCLQ 180

Query: 181 LQKEVLGVENQADRRAGNKARTKCLPQITGYTCSAI 217
           LQKE LG ENQ DRR GNK RT+CLPQI  YTC AI
Sbjct: 181 LQKEGLG-ENQIDRRPGNKTRTRCLPQIASYTCRAI 215

[Close]

BLAST of Lsi11G005380 vs. TAIR 10
Match: AT3G05327.1 (Cyclin family protein )

HSP 1 Score: 178.3 bits (451), Expect = 6.5e-45
Identity = 94/194 (48.45%), Postives = 129/194 (66.49%), Query Frame = 0


Query: 19  LGLSESGKLIPSS--PRVLSILSSVFETSIQKNEKLL-KRLKKKDSVTIFHGSRAPTMSI 78
           LGL E     P S  PRV+++L+S  E  IQKN+K    R  K D +T+FHGS+AP++SI
Sbjct: 16  LGLLEDSDQPPDSTPPRVITLLASTLEKMIQKNKKKFHTRHNKADEITMFHGSKAPSLSI 75

Query: 79  GQYIDRILKYTCCGTSCLVVAYIYIERYLQKMDA-----YLTNLNIHRLLITSIMVAAKF 138
            +Y +RI +Y  C   C V A+ YI RYLQ+ +A      LT+LN+HRLLITS++VAAKF
Sbjct: 76  YRYTERIHRYAQCSPVCFVAAFAYILRYLQRPEATSTARRLTSLNVHRLLITSLLVAAKF 135

Query: 139 IDAGCYNNTFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVLGVEN 198
           ++  CYNN +YAK+GGVST+EMN LE  FL ++DFRL++T + F  HCL LQKE +  ++
Sbjct: 136 LERQCYNNAYYAKIGGVSTEEMNRLERTFLVDVDFRLYITTETFEKHCLMLQKETVPCDS 195

Query: 199 QADRRAGNKARTKC 205
           +  R    +    C
Sbjct: 196 RKLRTVLGEIACSC 209

[Close]

BLAST of Lsi11G005380 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 )

HSP 1 Score: 166.8 bits (421), Expect = 2.0e-41
Identity = 84/166 (50.60%), Postives = 109/166 (65.66%), Query Frame = 0


Query: 19  LGLSESGKLIPSSPRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQY 78
           LGL   GK +   P VLS LSS  E S+  N      L   DSVT+F G   P +SI  Y
Sbjct: 19  LGLIIEGKRLKKPPTVLSRLSSSLERSLLLNHDDKILLGSPDSVTVFDGRSPPEISIAHY 78

Query: 79  IDRILKYTCCGTSCLVVAYIYIERYLQKMDAYLTNLNIHRLLITSIMVAAKFIDAGCYNN 138
           +DRI KY+CC  SC V+A+IYI+ +L K  A L  LN+HRL+IT++M+AAK  D   +NN
Sbjct: 79  LDRIFKYSCCSPSCFVIAHIYIDHFLHKTRALLKPLNVHRLIITTVMLAAKVFDDRYFNN 138

Query: 139 TFYAKVGGVSTKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKE 185
            +YA+VGGV+T+E+N LE+E LF LDF+L V    F THC QL+K+
Sbjct: 139 AYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCCQLEKQ 184

[Close]

BLAST of Lsi11G005380 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 )

HSP 1 Score: 152.5 bits (384), Expect = 3.8e-37
Identity = 77/158 (48.73%), Postives = 110/158 (69.62%), Query Frame = 0


Query: 30  SSPRVLSILSSVFETSIQKNEKLLKRLKK-KDSVTIFHGSRAPTMSIGQYIDRILKYTCC 89
           ++PRVL+I+S V E  + +NE L K+ K    S+  FHG RAP++SI +Y++RI KYT C
Sbjct: 23  ATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERIYKYTKC 82

Query: 90  GTSCLVVAYIYIERYLQKMDAYL-TNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGV 149
             +C VV Y+YI+R   K    L  +LN+HRLL+T +M+AAK +D   YNN FYA+VGGV
Sbjct: 83  SPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFYARVGGV 142

Query: 150 STKEMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV 186
           S  ++N +E+E LF LDFR+ V+  VF ++C  L+KE+
Sbjct: 143 SNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEM 180

[Close]

BLAST of Lsi11G005380 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 )

HSP 1 Score: 149.1 bits (375), Expect = 4.2e-36
Identity = 71/154 (46.10%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 33  RVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQYIDRILKYTCCGTSC 92
           ++++ LSS+ E   + N+   +   +   V++FHG   PT++I  Y++RI KY  C  SC
Sbjct: 12  KLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLERIFKYANCSPSC 71

Query: 93  LVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTKE 152
            VVAY+Y++R+  +  +  + + N+HRLLITS+MVAAKF+D   YNN +YAKVGG+STKE
Sbjct: 72  FVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAKVGGISTKE 131

Query: 153 MNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEV 186
           MN LE++FLF L F L+VT + F+ +   LQKE+
Sbjct: 132 MNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEM 165

[Close]

BLAST of Lsi11G005380 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 )

HSP 1 Score: 147.9 bits (372), Expect = 9.4e-36
Identity = 66/156 (42.31%), Postives = 110/156 (70.51%), Query Frame = 0


Query: 32  PRVLSILSSVFETSIQKNEKLLKRLKKKDSVTIFHGSRAPTMSIGQYIDRILKYTCCGTS 91
           P V++ +SS+ +   + N+ L +  ++   ++ F+    P++SI  Y++RI KY  C  S
Sbjct: 21  PNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCSDS 80

Query: 92  CLVVAYIYIERYLQKMDAY-LTNLNIHRLLITSIMVAAKFIDAGCYNNTFYAKVGGVSTK 151
           C +VAYIY++R++QK     + + N+HRL+ITS++V+AKF+D  CYNN FYAKVGG++T+
Sbjct: 81  CYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGITTE 140

Query: 152 EMNSLEIEFLFNLDFRLHVTADVFSTHCLQLQKEVL 187
           EMN LE++FLF + F+L+VT   ++ +C  LQ+E++
Sbjct: 141 EMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMV 176

The following BLAST results are available for this feature:

BLAST of Lsi11G005380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q75HV0	6.7e-47	47.14	Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1	[more]
Q8LB60	2.7e-40	50.60	Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2	[more]
Q9LJ45	5.4e-36	48.73	Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1	[more]
O80513	5.9e-35	46.10	Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1	[more]
Q9LY16	1.3e-34	42.31	Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1	[more]

BLAST of Lsi11G005380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJL5	1.2e-107	92.59	Cyclin OS=Cucumis sativus OX=3659 GN=Csa_2G021730 PE=3 SV=1	[more]
A0A1S3C004	6.0e-107	91.67	cyclin-P3-1 OS=Cucumis melo OX=3656 GN=LOC103495057 PE=3 SV=1	[more]
A6YTD1	6.0e-107	91.67	Cyclin-dependent kinase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A5A7TWJ7	3.3e-105	91.55	Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00220 PE=3 SV...	[more]
A0A6J1G2L7	9.3e-100	87.96	Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111450231 PE=3 SV=1	[more]

BLAST of Lsi11G005380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886918.1	1.7e-108	93.06	cyclin-P3-1 [Benincasa hispida] >XP_038886919.1 cyclin-P3-1 [Benincasa hispida] ...	[more]
XP_004139180.1	2.5e-107	92.59	cyclin-P3-1 isoform X1 [Cucumis sativus] >XP_011648813.1 cyclin-P3-1 isoform X1 ...	[more]
XP_008454704.1	1.2e-106	91.67	PREDICTED: cyclin-P3-1 [Cucumis melo] >XP_008454712.1 PREDICTED: cyclin-P3-1 [Cu...	[more]
KAA0047963.1	6.8e-105	91.55	cyclin-P3-1 [Cucumis melo var. makuwa] >TYK18312.1 cyclin-P3-1 [Cucumis melo var...	[more]
XP_022946012.1	1.9e-99	87.96	cyclin-P3-1-like [Cucurbita moschata] >XP_022946013.1 cyclin-P3-1-like [Cucurbit...	[more]

BLAST of Lsi11G005380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05327.1	6.5e-45	48.45	Cyclin family protein	[more]
AT3G63120.1	2.0e-41	50.60	cyclin p1;1	[more]
AT3G21870.1	3.8e-37	48.73	cyclin p2;1	[more]
AT2G44740.1	4.2e-36	46.10	cyclin p4;1	[more]
AT5G07450.1	9.4e-36	42.31	cyclin p4;3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.472.10		coord: 29..212 e-value: 3.3E-50 score: 172.6
None	No IPR available	PANTHER	PTHR15615:SF80	CYCLIN	coord: 6..200
None	No IPR available	PANTHER	PTHR15615	UNCHARACTERIZED	coord: 6..200
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 54..167 e-value: 1.5E-32 score: 113.2
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 78..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G005380.1	Lsi11G005380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0019901	protein kinase binding