Lsi11G005080 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G005080
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	UPF0603 protein At1g54780, chloroplastic
Location	chr11: 5406248 .. 5408531 (+)
RNA-Seq Expression	Lsi11G005080
Synteny	Lsi11G005080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACCATTTTCTCTCCCCACTCTCTCTCTCCTCTCCTAAACCCCAAACCTTCTTCTTCCAAGAATTTCTTGCCCTATTCCTTCCAAACCAGAACAAATCTTGTTTCTCTCTCTAAACCCATTTCCTTCTCCCTCAAAACCCCTTCTCCTCCGAAGTCTCTCCGATCATCTCTCCCAGTTCCTTCGACTTGGTTCTCCCATCTCCAACATGGGCTGGCGGCGGTAGCGATTTCTTTGGCGCTTAACTTTTCCCCATTGTTGGCCGCCCATAATGCCCTAGCGTCTGAATTTGATGTGCTCAATGATGGGCCGCCGAAGGAATCGCATGTGGTGGACGATGCCGGAGTTCTCAGTCGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACAGATTTGGAGTCGAGGAAGAATTTTCATATTGATTTCGTCACTGTTAGAAAGCTCACTGTAAGTTCTTTTCTTTTATCTCCCTTCAAATTCTAGTGAGAGAAATTAAACACTTGTGGTTCAGAAAAGCTGTTGGGTCATGAATGTCCATTTTACTCTGCTGTGATCCAAATGGTAGAACAATTCTTGAAGAGTATCTTTTACAGTGGAATGATTCTAATTTAGATGAATTTGTTGATGAACTTGGTGTATGTTTATGAAAATTTGAAAATATTTATAAGATACATGATCGGAAAATGGGCATCATTTTGTGATGGCTTGTTTCAAATGAAGGCACACCACAAGACTTTGTCTAGAAATACCTTCCCTAGTCTGAAGGTTTTGGTTCAAGCTCTTAAAAGAAACTTTTTTTTTTCTTTTCAAAACTTGACAAAATTTAAAAAAAAAAAAATATATATATATATATATATATATATAGGTGGAGCACGAAATTAGTGTTTATAAGCTTAATTTTTAAAACTAAGTGGTTATCAAACGAGGCTTTGATGCTCCGTAAGGTCTCTCAAGGTTAGTCTTGTGCAAGGAGTGTCTATGATATATAAAAAAAAGAAAAGTATATTTTTGGTCCCTAGATTTTGGGTCTAATTTCTATTTGGTTCCTGAGTTTCAAATTGTTACACATTTAGTTCTTAAGTTTTAAATTTGGTTTCAATTTAATTTCTAAGGTTTCAAACTGTTACAATTATATCATTGGCATTTGAATTTTGTTTCAATTTGGTCTGAGTGTTTCATGAAAAGTTGAGGTTAAAAATGTAAAATCTTGAAACATAAGGATCAAATTGAAATAAAATTCAAATCTCAATGGTAAAATTACAATATTTTGAAACTTAGAGGCTAAATTGAAACCAAACTGAAAACTTAAGGACTAAATGTGTAACATTTTGAAAGAACTAAATAGAAACTAAATCCAAAATCTAGGGACCAAAAAAGTATTTTTCCTTAAAAATATATATATATACATATATACTAAGATATGAAATGAAAAGGGAGATGTATGAAATCTGATATGAATTTATAAACTGTTGGCTGTAGAGCAAAGCTGATGCATTTGAGTATGCCGATCAAGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGCATAGTTGTTCTTGTCACCAGTCAGAAAGAAGGAGCCATTACTGGTGGCCCTGCCTTTATCCAAGCAGTTGGTGAAAATATTCTTGATGCCACTGTAACAGAGAATCTTCCAGGTTAACTAACTACCACTTCTTCAACTTATTTCATTCTTCACTGTCATCAACATTGAACAAACAAAACTCCCACCTAAATCTGCTAGTGCTATTTCATCAGCCTCTTCACCCATTAATTTCTACTACCTCTCTTGCTGAACTTAAATTGTAACACATTACAACTAGTAGATGCCTCAAGTGCACTCGTATCTTGTCAAGTCACTGTTGTTTATAAGTTTATCAATTTCAGAGGAAAAGATAACCGCAAACAATCTCGTATCTTAGCAGGTGTCAATATCCTTCCCAGCTAGTAGTTGTGAATTATGCTACTTTGTTGTTTTTCAAACTGCAACTGACTAAGATTGTTCTTATCTAACTGCAGTCTTAGCTACTGATGAAAAGTATAACGAAGCCATATATAGCAGTGCAAAGCGGTTAGTTGCTGCCATTGATGGCCTTCCAGATCCGGGTGGTCCTTCAATTAAGGATAATAAACGCGAATCCAACTTCAAAACAAGGGAAGAGACCGAGGAGAAACGAGGACAGTTTACTCTTGTAGTTGGAGGTTTGTTAGTGATAGCCTTCGTTGTTCCTATGGCTCAGTACTATGCTTATGTATCCAGGAAGTAA

mRNA sequence

ATGGAAACCATTTTCTCTCCCCACTCTCTCTCTCCTCTCCTAAACCCCAAACCTTCTTCTTCCAAGAATTTCTTGCCCTATTCCTTCCAAACCAGAACAAATCTTGTTTCTCTCTCTAAACCCATTTCCTTCTCCCTCAAAACCCCTTCTCCTCCGAAGTCTCTCCGATCATCTCTCCCAGTTCCTTCGACTTGGTTCTCCCATCTCCAACATGGGCTGGCGGCGGTAGCGATTTCTTTGGCGCTTAACTTTTCCCCATTGTTGGCCGCCCATAATGCCCTAGCGTCTGAATTTGATGTGCTCAATGATGGGCCGCCGAAGGAATCGCATGTGGTGGACGATGCCGGAGTTCTCAGTCGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACAGATTTGGAGTCGAGGAAGAATTTTCATATTGATTTCGTCACTGTTAGAAAGCTCACTAGCAAAGCTGATGCATTTGAGTATGCCGATCAAGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGCATAGTTGTTCTTGTCACCAGTCAGAAAGAAGGAGCCATTACTGGTGGCCCTGCCTTTATCCAAGCAGTTGGTGAAAATATTCTTGATGCCACTGTAACAGAGAATCTTCCAGTAGATGCCTCAAGTGCACTCGTATCTTGTCAAGTCACTGTTGTTTATAAGTTTATCAATTTCAGAGGAAAAGATAACCGCAAACAATCTCGTATCTTAGCAGTCTTAGCTACTGATGAAAAGTATAACGAAGCCATATATAGCAGTGCAAAGCGGTTAGTTGCTGCCATTGATGGCCTTCCAGATCCGGGTGGTCCTTCAATTAAGGATAATAAACGCGAATCCAACTTCAAAACAAGGGAAGAGACCGAGGAGAAACGAGGACAGTTTACTCTTGTAGTTGGAGGTTTGTTAGTGATAGCCTTCGTTGTTCCTATGGCTCAGTACTATGCTTATGTATCCAGGAAGTAA

Coding sequence (CDS)

ATGGAAACCATTTTCTCTCCCCACTCTCTCTCTCCTCTCCTAAACCCCAAACCTTCTTCTTCCAAGAATTTCTTGCCCTATTCCTTCCAAACCAGAACAAATCTTGTTTCTCTCTCTAAACCCATTTCCTTCTCCCTCAAAACCCCTTCTCCTCCGAAGTCTCTCCGATCATCTCTCCCAGTTCCTTCGACTTGGTTCTCCCATCTCCAACATGGGCTGGCGGCGGTAGCGATTTCTTTGGCGCTTAACTTTTCCCCATTGTTGGCCGCCCATAATGCCCTAGCGTCTGAATTTGATGTGCTCAATGATGGGCCGCCGAAGGAATCGCATGTGGTGGACGATGCCGGAGTTCTCAGTCGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACAGATTTGGAGTCGAGGAAGAATTTTCATATTGATTTCGTCACTGTTAGAAAGCTCACTAGCAAAGCTGATGCATTTGAGTATGCCGATCAAGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGCATAGTTGTTCTTGTCACCAGTCAGAAAGAAGGAGCCATTACTGGTGGCCCTGCCTTTATCCAAGCAGTTGGTGAAAATATTCTTGATGCCACTGTAACAGAGAATCTTCCAGTAGATGCCTCAAGTGCACTCGTATCTTGTCAAGTCACTGTTGTTTATAAGTTTATCAATTTCAGAGGAAAAGATAACCGCAAACAATCTCGTATCTTAGCAGTCTTAGCTACTGATGAAAAGTATAACGAAGCCATATATAGCAGTGCAAAGCGGTTAGTTGCTGCCATTGATGGCCTTCCAGATCCGGGTGGTCCTTCAATTAAGGATAATAAACGCGAATCCAACTTCAAAACAAGGGAAGAGACCGAGGAGAAACGAGGACAGTTTACTCTTGTAGTTGGAGGTTTGTTAGTGATAGCCTTCGTTGTTCCTATGGCTCAGTACTATGCTTATGTATCCAGGAAGTAA

Protein sequence

METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLPVPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGKDNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETEEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK

Homology

[Close]

BLAST of Lsi11G005080 vs. ExPASy Swiss-Prot
Match: Q9ZVL6 (UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g54780 PE=1 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 7.5e-106
Identity = 215/332 (64.76%), Postives = 249/332 (75.00%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPK--SLRSS 60
           MET+ SP +LSP LNPKP S     P S     + +SLSKP +F     S PK  S R +
Sbjct: 1   METLLSPRALSPPLNPKPLSLHQTKPTS-----HSLSLSKPTTF-----SGPKHLSTRFT 60

Query: 61  LPVPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVL 120
            P    W    + GLAA+A+SL L FSP+     ALASEF++LNDGPPKE++VVDDAGVL
Sbjct: 61  KPESRNWLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVL 120

Query: 121 SRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180
           SRVTKSDLK+LL+DLE RK   ++F+TVRKLTSKADAFEYADQVLE+WYP++E+GNNKGI
Sbjct: 121 SRVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGI 180

Query: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGK 240
           VVL+TSQKEGAITGGPAFI+AVGENILDATV+ENLP                        
Sbjct: 181 VVLITSQKEGAITGGPAFIEAVGENILDATVSENLP------------------------ 240

Query: 241 DNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETE 300
                     VLATDEKYNEA+YSSAKRLVAAIDG PDPGGP++KD+KRESNFKT+EET+
Sbjct: 241 ----------VLATDEKYNEAVYSSAKRLVAAIDGQPDPGGPTVKDSKRESNFKTKEETD 285

Query: 301 EKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           EKRGQF+LVVGGLLVIAFVVPMAQY+AYVSRK
Sbjct: 301 EKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

[Close]

BLAST of Lsi11G005080 vs. ExPASy Swiss-Prot
Match: A2Y4G9 (UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19898 PE=3 SV=2)

HSP 1 Score: 364.4 bits (934), Expect = 1.4e-99
Identity = 206/338 (60.95%), Postives = 245/338 (72.49%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNP-KPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSL 60
           MET+ SP   S LL+P + S  K   P +  + ++       +S +L+   PP    ++ 
Sbjct: 1   METLLSP---STLLSPLRGSKKKPASPAASASSSSSSPARSVVSCALRRQQPPPQAVAAW 60

Query: 61  PVP-------STWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVV 120
                      +W + LQHGLAA A+SLA++ +P  A   A+ASEFDVLN GPP++++VV
Sbjct: 61  RGDGGRGGGVGSWATFLQHGLAAAALSLAISMAP--APAPAVASEFDVLNGGPPEDTYVV 120

Query: 121 DDAGVLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVED 180
           DDAGVLSRVTKSD+KRL+ DLESRKN  I+F+TVRKLTSKADAFEYADQVLE+WYPTVE+
Sbjct: 121 DDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEE 180

Query: 181 GNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKF 240
           GNNKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLP                  
Sbjct: 181 GNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLP------------------ 240

Query: 241 INFRGKDNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFK 300
                           VLATDEKYNEAIY++AKRL AAIDGLPDPGGP+ KDNKRESNFK
Sbjct: 241 ----------------VLATDEKYNEAIYTTAKRLAAAIDGLPDPGGPTFKDNKRESNFK 299

Query: 301 TREETEEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           T+EETEEKRGQFTLVVGGLLVIAFVVPMAQYYAY+S+K
Sbjct: 301 TKEETEEKRGQFTLVVGGLLVIAFVVPMAQYYAYISKK 299

[Close]

BLAST of Lsi11G005080 vs. ExPASy Swiss-Prot
Match: Q6ATY4 (UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0401100 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.4e-99
Identity = 206/338 (60.95%), Postives = 245/338 (72.49%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNP-KPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSL 60
           MET+ SP   S LL+P + S  K   P +  + ++       +S +L+   PP    ++ 
Sbjct: 1   METLLSP---STLLSPLRGSKKKPASPAASASSSSSSPARSVVSCALRRQQPPPQAVAAW 60

Query: 61  PVP-------STWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVV 120
                      +W + LQHGLAA A+SLA++ +P  A   A+ASEFDVLN GPP++++VV
Sbjct: 61  RGDGGRGGGVGSWATFLQHGLAAAALSLAISMAP--APAPAVASEFDVLNGGPPEDTYVV 120

Query: 121 DDAGVLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVED 180
           DDAGVLSRVTKSD+KRL+ DLESRKN  I+F+TVRKLTSKADAFEYADQVLE+WYPTVE+
Sbjct: 121 DDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEE 180

Query: 181 GNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKF 240
           GNNKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLP                  
Sbjct: 181 GNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLP------------------ 240

Query: 241 INFRGKDNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFK 300
                           VLATDEKYNEAIY++AKRL AAIDGLPDPGGP+ KDNKRESNFK
Sbjct: 241 ----------------VLATDEKYNEAIYTTAKRLAAAIDGLPDPGGPTFKDNKRESNFK 299

Query: 301 TREETEEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           T+EETEEKRGQFTLVVGGLLVIAFVVPMAQYYAY+S+K
Sbjct: 301 TKEETEEKRGQFTLVVGGLLVIAFVVPMAQYYAYISKK 299

[Close]

BLAST of Lsi11G005080 vs. ExPASy TrEMBL
Match: A0A5D3D492 (UPF0603 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00650 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.6e-146
Identity = 282/330 (85.45%), Postives = 287/330 (86.97%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           METI SPHSLSPLLNPKPSSSKN   YS Q R+NLVSLSKPIS SLKTPSPPKSLRSSLP
Sbjct: 1   METILSPHSLSPLLNPKPSSSKNLSLYSTQPRSNLVSLSKPISLSLKTPSPPKSLRSSLP 60

Query: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLSR 120
           VPSTWFSHLQHGLAAVAISLALNFSPLLA HNALASEFDVLNDGPPKE+HVVDDAGVLSR
Sbjct: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGVLSR 120

Query: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180
           VTKSDLKRLLTDLE+RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV
Sbjct: 121 VTKSDLKRLLTDLETRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180

Query: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGKDN 240
           LVTSQKEGAITGGPAFIQAVGENILDATVTENLP                          
Sbjct: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLP-------------------------- 240

Query: 241 RKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETEEK 300
                   VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPS KDNKRESNFKTREETEEK
Sbjct: 241 --------VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSFKDNKRESNFKTREETEEK 296

Query: 301 RGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           RGQF+LVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 RGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296

[Close]

BLAST of Lsi11G005080 vs. ExPASy TrEMBL
Match: A0A1S3C0U8 (UPF0603 protein At1g54780, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495349 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.6e-146
Identity = 282/330 (85.45%), Postives = 287/330 (86.97%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           METI SPHSLSPLLNPKPSSSKN   YS Q R+NLVSLSKPIS SLKTPSPPKSLRSSLP
Sbjct: 1   METILSPHSLSPLLNPKPSSSKNLSLYSTQPRSNLVSLSKPISLSLKTPSPPKSLRSSLP 60

Query: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLSR 120
           VPSTWFSHLQHGLAAVAISLALNFSPLLA HNALASEFDVLNDGPPKE+HVVDDAGVLSR
Sbjct: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGVLSR 120

Query: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180
           VTKSDLKRLLTDLE+RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV
Sbjct: 121 VTKSDLKRLLTDLETRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180

Query: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGKDN 240
           LVTSQKEGAITGGPAFIQAVGENILDATVTENLP                          
Sbjct: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLP-------------------------- 240

Query: 241 RKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETEEK 300
                   VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPS KDNKRESNFKTREETEEK
Sbjct: 241 --------VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSFKDNKRESNFKTREETEEK 296

Query: 301 RGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           RGQF+LVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 RGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296

[Close]

BLAST of Lsi11G005080 vs. ExPASy TrEMBL
Match: A0A6J1G3B4 (UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111450415 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 4.0e-142
Identity = 274/330 (83.03%), Postives = 282/330 (85.45%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           METI SPH+LSPLLNPKPSS KN  PYSFQ R + VS S PISFSLK PS PKSLRSSLP
Sbjct: 1   METILSPHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNPS-PKSLRSSLP 60

Query: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLSR 120
           VPS WFSHLQHGLAA+AISLALNFSPLLA HNALASEFDVLNDGPPKESH+VDDAGVLSR
Sbjct: 61  VPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGVLSR 120

Query: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180
           VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV
Sbjct: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180

Query: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGKDN 240
           LVTSQKEGAITGGPAFIQAVGENILDATVTENLP                          
Sbjct: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLP-------------------------- 240

Query: 241 RKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETEEK 300
                   VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPS K+NKRESNFK+REETEEK
Sbjct: 241 --------VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSFKENKRESNFKSREETEEK 295

Query: 301 RGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           RGQF+LVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 RGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of Lsi11G005080 vs. ExPASy TrEMBL
Match: A0A0A0LGA5 (TPM_phosphatase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G020910 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 3.3e-141
Identity = 274/331 (82.78%), Postives = 284/331 (85.80%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNPKPSSSKN-FLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSL 60
           METI SP+SLSP+LNPKPSSSKN  L +S Q R+NL SLSKPIS SLKTPSPPKSLRSSL
Sbjct: 1   METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 60

Query: 61  PVPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLS 120
           P PSTWFSHLQHGLAAVAISLALNFSPLLA HNALASEFDVL+DGPPKE+H+VDDAGVLS
Sbjct: 61  PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 120

Query: 121 RVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180
           RVTKSDLKRLLTDLE RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV
Sbjct: 121 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGKD 240
           VLVTSQKEGAITGGPAFIQAVGENILDATVTENLP                         
Sbjct: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLP------------------------- 240

Query: 241 NRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETEE 300
                    VLATDEKYNEAIYSSAKRLVAAIDGLPD GGPS KDNKRESNFKTREETEE
Sbjct: 241 ---------VLATDEKYNEAIYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEE 297

Query: 301 KRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           KRGQFTLVVGGLLVIAF+VPMAQYYAY+S+K
Sbjct: 301 KRGQFTLVVGGLLVIAFIVPMAQYYAYISKK 297

[Close]

BLAST of Lsi11G005080 vs. ExPASy TrEMBL
Match: A0A6J1KEE9 (UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493599 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 5.7e-141
Identity = 273/333 (81.98%), Postives = 281/333 (84.38%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPP---KSLRS 60
           METI SPH+LSPLLNPKPSS KN  PYSFQ R + VS S PISFSLKTPSP     SLRS
Sbjct: 49  METILSPHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKTPSPKSLRSSLRS 108

Query: 61  SLPVPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGV 120
           SLPVPS WFSHLQHGLAA+AISLALNFSPLLA HNALASEFDVLNDGPPKESH+VDDAGV
Sbjct: 109 SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 168

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLKRLLTDLE RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG
Sbjct: 169 LSRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 228

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRG 240
           IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLP                       
Sbjct: 229 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLP----------------------- 288

Query: 241 KDNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREET 300
                      VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPS K+NKRESNFK+REET
Sbjct: 289 -----------VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSFKENKRESNFKSREET 347

Query: 301 EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           EEKRGQF+LVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 349 EEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 347

[Close]

BLAST of Lsi11G005080 vs. NCBI nr
Match: XP_008455096.1 (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo] >KAA0063677.1 UPF0603 protein [Cucumis melo var. makuwa] >TYK18350.1 UPF0603 protein [Cucumis melo var. makuwa])

HSP 1 Score: 528.9 bits (1361), Expect = 3.2e-146
Identity = 282/330 (85.45%), Postives = 287/330 (86.97%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           METI SPHSLSPLLNPKPSSSKN   YS Q R+NLVSLSKPIS SLKTPSPPKSLRSSLP
Sbjct: 1   METILSPHSLSPLLNPKPSSSKNLSLYSTQPRSNLVSLSKPISLSLKTPSPPKSLRSSLP 60

Query: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLSR 120
           VPSTWFSHLQHGLAAVAISLALNFSPLLA HNALASEFDVLNDGPPKE+HVVDDAGVLSR
Sbjct: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGVLSR 120

Query: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180
           VTKSDLKRLLTDLE+RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV
Sbjct: 121 VTKSDLKRLLTDLETRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180

Query: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGKDN 240
           LVTSQKEGAITGGPAFIQAVGENILDATVTENLP                          
Sbjct: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLP-------------------------- 240

Query: 241 RKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETEEK 300
                   VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPS KDNKRESNFKTREETEEK
Sbjct: 241 --------VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSFKDNKRESNFKTREETEEK 296

Query: 301 RGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           RGQF+LVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 RGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296

[Close]

BLAST of Lsi11G005080 vs. NCBI nr
Match: XP_022946287.1 (UPF0603 protein At1g54780, chloroplastic-like [Cucurbita moschata] >KAG6599269.1 UPF0603 protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 514.2 bits (1323), Expect = 8.2e-142
Identity = 274/330 (83.03%), Postives = 282/330 (85.45%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSLP 60
           METI SPH+LSPLLNPKPSS KN  PYSFQ R + VS S PISFSLK PS PKSLRSSLP
Sbjct: 1   METILSPHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNPS-PKSLRSSLP 60

Query: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLSR 120
           VPS WFSHLQHGLAA+AISLALNFSPLLA HNALASEFDVLNDGPPKESH+VDDAGVLSR
Sbjct: 61  VPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGVLSR 120

Query: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180
           VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV
Sbjct: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180

Query: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGKDN 240
           LVTSQKEGAITGGPAFIQAVGENILDATVTENLP                          
Sbjct: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLP-------------------------- 240

Query: 241 RKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETEEK 300
                   VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPS K+NKRESNFK+REETEEK
Sbjct: 241 --------VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSFKENKRESNFKSREETEEK 295

Query: 301 RGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           RGQF+LVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 RGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of Lsi11G005080 vs. NCBI nr
Match: XP_004139197.1 (UPF0603 protein At1g54780, chloroplastic [Cucumis sativus])

HSP 1 Score: 511.1 bits (1315), Expect = 6.9e-141
Identity = 274/331 (82.78%), Postives = 284/331 (85.80%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNPKPSSSKN-FLPYSFQTRTNLVSLSKPISFSLKTPSPPKSLRSSL 60
           METI SP+SLSP+LNPKPSSSKN  L +S Q R+NL SLSKPIS SLKTPSPPKSLRSSL
Sbjct: 1   METILSPYSLSPILNPKPSSSKNPSLYHSTQPRSNLASLSKPISLSLKTPSPPKSLRSSL 60

Query: 61  PVPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVLS 120
           P PSTWFSHLQHGLAAVAISLALNFSPLLA HNALASEFDVL+DGPPKE+H+VDDAGVLS
Sbjct: 61  PFPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLSDGPPKETHLVDDAGVLS 120

Query: 121 RVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180
           RVTKSDLKRLLTDLE RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV
Sbjct: 121 RVTKSDLKRLLTDLEMRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGKD 240
           VLVTSQKEGAITGGPAFIQAVGENILDATVTENLP                         
Sbjct: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLP------------------------- 240

Query: 241 NRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETEE 300
                    VLATDEKYNEAIYSSAKRLVAAIDGLPD GGPS KDNKRESNFKTREETEE
Sbjct: 241 ---------VLATDEKYNEAIYSSAKRLVAAIDGLPDTGGPSFKDNKRESNFKTREETEE 297

Query: 301 KRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           KRGQFTLVVGGLLVIAF+VPMAQYYAY+S+K
Sbjct: 301 KRGQFTLVVGGLLVIAFIVPMAQYYAYISKK 297

[Close]

BLAST of Lsi11G005080 vs. NCBI nr
Match: XP_022999120.1 (UPF0603 protein At1g54780, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 510.4 bits (1313), Expect = 1.2e-140
Identity = 273/333 (81.98%), Postives = 281/333 (84.38%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPP---KSLRS 60
           METI SPH+LSPLLNPKPSS KN  PYSFQ R + VS S PISFSLKTPSP     SLRS
Sbjct: 49  METILSPHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKTPSPKSLRSSLRS 108

Query: 61  SLPVPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGV 120
           SLPVPS WFSHLQHGLAA+AISLALNFSPLLA HNALASEFDVLNDGPPKESH+VDDAGV
Sbjct: 109 SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 168

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLKRLLTDLE RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG
Sbjct: 169 LSRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 228

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRG 240
           IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLP                       
Sbjct: 229 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLP----------------------- 288

Query: 241 KDNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREET 300
                      VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPS K+NKRESNFK+REET
Sbjct: 289 -----------VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSFKENKRESNFKSREET 347

Query: 301 EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           EEKRGQF+LVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 349 EEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 347

[Close]

BLAST of Lsi11G005080 vs. NCBI nr
Match: XP_023547269.1 (UPF0603 protein At1g54780, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 507.3 bits (1305), Expect = 1.0e-139
Identity = 272/333 (81.68%), Postives = 280/333 (84.08%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPP---KSLRS 60
           METI SPH+LSPLLNPKPSS KN  PYSFQ R + VS S PISFSLK  SP     SLRS
Sbjct: 1   METILSPHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRS 60

Query: 61  SLPVPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGV 120
           SLPVPS WFSHLQHGLAA+AISLALNFSPLLA HNALASEFDVLNDGPPKESH+VDDAGV
Sbjct: 61  SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG
Sbjct: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRG 240
           IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLP                       
Sbjct: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLP----------------------- 240

Query: 241 KDNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREET 300
                      VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPS K+NKRESNFK+REET
Sbjct: 241 -----------VLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSFKENKRESNFKSREET 299

Query: 301 EEKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           EEKRGQF+LVVGGLLVIAFVVPMAQYYAYVS+K
Sbjct: 301 EEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 299

[Close]

BLAST of Lsi11G005080 vs. TAIR 10
Match: AT1G54780.1 (thylakoid lumen 18.3 kDa protein )

HSP 1 Score: 385.2 bits (988), Expect = 5.3e-107
Identity = 215/332 (64.76%), Postives = 249/332 (75.00%), Query Frame = 0


Query: 1   METIFSPHSLSPLLNPKPSSSKNFLPYSFQTRTNLVSLSKPISFSLKTPSPPK--SLRSS 60
           MET+ SP +LSP LNPKP S     P S     + +SLSKP +F     S PK  S R +
Sbjct: 1   METLLSPRALSPPLNPKPLSLHQTKPTS-----HSLSLSKPTTF-----SGPKHLSTRFT 60

Query: 61  LPVPSTWFSHLQHGLAAVAISLALNFSPLLAAHNALASEFDVLNDGPPKESHVVDDAGVL 120
            P    W    + GLAA+A+SL L FSP+     ALASEF++LNDGPPKE++VVDDAGVL
Sbjct: 61  KPESRNWLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVL 120

Query: 121 SRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180
           SRVTKSDLK+LL+DLE RK   ++F+TVRKLTSKADAFEYADQVLE+WYP++E+GNNKGI
Sbjct: 121 SRVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGI 180

Query: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVDASSALVSCQVTVVYKFINFRGK 240
           VVL+TSQKEGAITGGPAFI+AVGENILDATV+ENLP                        
Sbjct: 181 VVLITSQKEGAITGGPAFIEAVGENILDATVSENLP------------------------ 240

Query: 241 DNRKQSRILAVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKDNKRESNFKTREETE 300
                     VLATDEKYNEA+YSSAKRLVAAIDG PDPGGP++KD+KRESNFKT+EET+
Sbjct: 241 ----------VLATDEKYNEAVYSSAKRLVAAIDGQPDPGGPTVKDSKRESNFKTKEETD 285

Query: 301 EKRGQFTLVVGGLLVIAFVVPMAQYYAYVSRK 331
           EKRGQF+LVVGGLLVIAFVVPMAQY+AYVSRK
Sbjct: 301 EKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

The following BLAST results are available for this feature:

BLAST of Lsi11G005080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVL6	7.5e-106	64.76	UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
A2Y4G9	1.4e-99	60.95	UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica OX=39946...	[more]
Q6ATY4	1.4e-99	60.95	UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of Lsi11G005080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D492	1.6e-146	85.45	UPF0603 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G0065...	[more]
A0A1S3C0U8	1.6e-146	85.45	UPF0603 protein At1g54780, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495349...	[more]
A0A6J1G3B4	4.0e-142	83.03	UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A0A0LGA5	3.3e-141	82.78	TPM_phosphatase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G02...	[more]
A0A6J1KEE9	5.7e-141	81.98	UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Lsi11G005080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455096.1	3.2e-146	85.45	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo] >KAA0063677.1...	[more]
XP_022946287.1	8.2e-142	83.03	UPF0603 protein At1g54780, chloroplastic-like [Cucurbita moschata] >KAG6599269.1...	[more]
XP_004139197.1	6.9e-141	82.78	UPF0603 protein At1g54780, chloroplastic [Cucumis sativus]	[more]
XP_022999120.1	1.2e-140	81.98	UPF0603 protein At1g54780, chloroplastic-like [Cucurbita maxima]	[more]
XP_023547269.1	1.0e-139	81.68	UPF0603 protein At1g54780, chloroplastic-like isoform X2 [Cucurbita pepo subsp. ...	[more]

BLAST of Lsi11G005080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54780.1	5.3e-107	64.76	thylakoid lumen 18.3 kDa protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.310.50		coord: 94..222 e-value: 5.8E-23 score: 82.9
None	No IPR available	PANTHER	PTHR30373	UNCHARACTERIZED	coord: 245..330
None	No IPR available	PANTHER	PTHR30373:SF2	UPF0603 PROTEIN OS05G0401100, CHLOROPLASTIC	coord: 245..330
None	No IPR available	PANTHER	PTHR30373	UNCHARACTERIZED	coord: 1..217
None	No IPR available	PANTHER	PTHR30373:SF2	UPF0603 PROTEIN OS05G0401100, CHLOROPLASTIC	coord: 1..217
IPR007621	TPM domain	PFAM	PF04536	TPM_phosphatase	coord: 111..211 e-value: 3.6E-15 score: 56.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G005080.1	Lsi11G005080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0010206	photosystem II repair
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0003729	mRNA binding