Lsi11G004250 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G004250
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	flowering locus K homology domain
Location	chr11: 4504274 .. 4510729 (-)
RNA-Seq Expression	Lsi11G004250
Synteny	Lsi11G004250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACATATATATGAATTTTAGAAAATTAAAGGGAAAATAAAAACATTTTCTCAATTCTCTTTGGATAAGAAACGAAAAAGGAAATGAAAAAGAAAAAGAAAAAACGATTATAAGATAAAATCCACCGGCCTTGTCTACCATTGTGGTCGCAAGCCCTCTCCTGTCTCTCTCTCTTCCTCTCCAAATATCTAAAACCCTAGAAAGCCACATTCGATTTTCCAGTTATTCTTTCATTCTTCTACTACCTCTCCTCGATTCTTCTGTAGGTATGCTAAAATAAGCTTGCTTTCTTGCTTTGTGAATAATATGTTTAGGGTTTGTTTCTTCCGTAGTTTTTTCTGTCCGTTCTTGTGATTTGTTATGTATTCCGTTCGTTTATTCAGTTTTTTCGCGTCAATGTTTGTGATGGAAGTTACGGAATGGTTGTATGTATCTTGGGTGTATAGCTTGTTTTGAATGGTTTCTTTTTCGAAGGGCTAGGGTTCAATTCGATGGGAATAAGCCTGTAAGTTTTGTGTTTCTTAATGTTTTAATTTTTGTATATTCTTCTGGTTGGTTTTTTTTTTTTTTTTTTTAATAAGTTCACTTACATGGGGTTGTTTTTTGTTTTTCAATTCTTGATGGCGATACTATCGTTCTTTTTCCCTGTATATTTTTATCTTCTTCTAGAAACCAAATGTAAGCTGGAGGTTACCCTGTTGGAACTCTGGAGGAATGCATGTCATGTTACTAATTCCACTTGTTAATAGGAGTTGAGGCCTGTGGATTTCTATTTTTTGTTTGTTTTTTTTTTCTTTTTTGAAATTTATACATTGCACTTTGATGCTAATGAGAGCAATTTCGTTTTTAAATTATTATTATTATTTTACTGATTATGGTAGTTTGTTGCAGTTTAATCTGTAAGAAACACATGGCTGATGTGGAACAGAACTATACGCATGTTGTCGATGATAATCAAGTAGATGAGAATGCACAAATATATGAGAATGCTCAGGTACATGACACTACACTGGAACAGGAAAATATACAGGAGGCAGAGAACTTGCACGAACTTCAGAATGAACACATACCAGAAACCTTAGAGTCTGAGCCAAAACAGGTGCATAATGAGGATCCTCTAACTGTTGTAAGTGAGAAGAAGTGGCCTGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCTGCCCAAAAGGTTGGTAGTATAATCGGTCGCAAAGGTGAGTTTATCAAGAAAATAGTTGAGGAAACGAGAGCTCGGATTAAAATTCTTGATGGTCCTCCAGGAACAGCAGAAAGAGCTGTAAGTTTAACTTTTTTCCTAATAATTTGGACAGTTTTTTGGTGTAAAATATTTGGATTTAGGGAGGTGCGGACGATTTAATATCAAATTAATGTGATGTTTCCAGTTATTTTATTTCGTTATGGATGTTAACGCTTATTAAAAATTTATTCTCTTAGGTTTTCTTAAGTTTTGTATTCACAATATGTATAGCACCTTGCATCAGGGTAGGGAAATATTGTGAATTGCAGGGGTTGATTATTAACTTTTTTTTTTCCAGTCAATTGTTTAATCTCTTTTGTACTCTTGGTTTGTCATATTGAAGCATGTGACATCAGTTATATGGCTGTGTAATGATGGAAATGTGACACTGAAAATCCCTAGGAAAATTTCAGACTATAAAGAGTTAATAAAAAATTATCATTGGTAATTTGATTAGAACTTGTACTAAAAGCCATTAAATCTCTGATTAAAAAACTTTAAAGTTGGATAATGTTCTAAAATTCTTCTGAGTCGTGGAACAAACATTAGATTAAACCACTCGGCACACTTAAAATGGATCTGCTAACGCTTGTGGGGAAGATTGAGCTCTCCATTACTCAAAGATATCTGTGCTTCTACACCCCATCTATGGGTGTTAAACATGATTCTCTTTCAGCTTTATAACTGCCAAAAGGAAATGTCCAGAAACTAAGATTAACCCTTGAAACATGCAAAAACGACATTAATAAATAAAACAAAAAGGATTGTAAGACTAATCCAGGTAATCCCAAAATATGGATACAGTTGCCTTGATTGTAGTAACAAAAAAGTGAATCTGTGCAGGTTGTGTGCAAATTTTAAGGCAACGACTCAATCTTCAATAGGATTCCATATTTGAAGAACCAAAGATCCAGATGTGGGGATCAGCATTCAACATTACAAAGTTCTGAAAAGTTGATCTGAATAACACGTAGGCATCTGGAACTTTTGTACCATGAAGCACTGCAATATCTCTGGTAACTTCAGATCTGAAGATTGATGTCAAGATTTCCAACGGGATAATAAATATGAAAAATGGGGAAGACATAATGATAAATGTTAAGAGTTAAAAATTTTAGTAATTTTAAAGATGCTTATACACGATTAAAGTTATGCTTAAAAAATTTGAGGCACTAAAACTGGCCAATCAAATATCAAATAGAAGTGATATGTGTTTTCTTGTGCTTCTATTGTGTCTTTGTCAATGACTGGGTCTATAATCCAACGACATATGAAGTAATACTGTGAAAACTTAAACTCGTTAATTTAAAAGTGAGGAAAACATAATTTCTTGAAACGTAGAAAGCTGGTAAATAGCCTCCATGTTCAAAAGTCACTCACAAATTTCAACATTTGCTGTACGATTCCTTTGATCCGTTATCCTCGTATATGTTTGCACCCTCTAAGATGTGTCTTGCATGATATATTGGAGGAAGAAATCATCCACTGTTTTGGCCCTTGCCCCTTCAGATATGTAGTCTGGGAGACAATTTTTTGAATTGCTTGGTCTGCCTGATAGTTTTGACAACTTTATTATTCTAATTGCAAAGTGCTCAAAATTCAATAAAGAAGTTAAGCAAGTTTGATGAGGAAGGGTTTTGGCATCTTGTGGGAGATCTGAATGGAAACAAATATGAATAGTTTTTGAAGGCCATTGTGGTATATGTAGTGCGTGTACATTTTGTGGCATCTTTTTGGTCCTAACTTGCAGATATAATTATTTTTTCATCGTAGGCTAGACAAATTGGTAAAGGTGATCTTTCTGTTGTTTCCATTTTTTCTACGTTTGGATGCACATCACAATCCATCAGTGCATTTATTATTTGATACAGGTGGAAGTTTGTGCAAATAAACTGATCTGCTACTGTTAAATTTGTTCTCAGACGTGTATTTAATAGTGAAACCGTGTCTTCAGAAATTTGTGATTGGCATGTTATTTGTTATTTTCTAATTGATGTTATAAACTAAATCTGTCATTTCATTGGTTGGGAGTGGGAATTTCATGTGCTGTTCCCTGTTGTGGAGCTCACTAGCTGGCACTGGAATTTGACGAGTTATTTTTGCTTTGCATCTGTTATACGAGCGATTTTCTCTCTGTAGAGCAGGGGATTTTAGATTCTATTACTTCATACTCATTTGATTTTTCCCGTTGTGGTAGTTGGTCAATTTGTGATGAAATTTTTTAGTTCTCACAAGGGTATGCTTCATTTAATAGGTAATGGTGTCTGCAAAGGACGAACCCGATTCTGCTTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGCATTGTTGATGGTCTGGAGGGTGATAATGCTCATGCTCCCAACATGGGAGGTAAAGTCTCAACGAGACTGCTTGTGGCAGCTTCACAAGCAGGAAGTTTAATTGGGAAGCAGGGTGGGACTGTTAAATCCATTCAAGAAGAGTCAAACTGTATAGTTAGAGTTCTTGGATCAGGTGGATTTCTACAGATGTCATTTGATTCTTTGCTTCAATGTCCTTATATTTGTCATATCATTATTTTTTATGTATTTCATTTGTTTCTGAATTGATAATTATACTTTTCCCTTTTGATGCATCCCTACCATCGTCATGCGGGAATTACTGCAGAAGATTTACCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGTGATCCAGCTGGTGTGCACAAAGCAGTGGAACTCATTGCTTCCCATCTTAGAAAGTTTCTTGTTGATCGAAGTATTATCCCAGTTTTTGAAATGAATGTGAGTATGATTTCCTAATGATTTTTCAACCACTTCCATTTTTAGAAGTAATGAAGTCTTAACATTCCTATTCTTCCATCCAACCCAAACGTCCAAAAATCAGATGCAGATGCAAAATCCACAGATGGAGCACATGCCGCCACCACCACACCAACCCTGGGGACCGCCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGCTTTGGACCGAATCCTCCTCAATATATGCCACCTCCTCGTCAATTTGACAATTATTATCCACCTGCTGAAATGCAATCGGTTATGGATAAGCAGCCCCATCATGGAATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTTCATGCAGCATCAAATGCACAGTCAGCACCATCAATTGTCACCCAGGTCAGATAAGCCTTTGAACTCCTATTTGAATGTGATTCTGCGAACTCTTTAAAATTTTGTCCAAAGTAATTCTGATGTGATCATTGTGGTGCTTGTGGTACATCCTTGATTCTATTTATATTTTCCATTTTTTCATTGATCAGCCAAGAAACATGGTAAGCATGCCATCATCCGAGTCATTGGGTTAAAAGCGTTCGCTCATTAAACACTTGCCATTTGGCCTAATCCCATTGTTCTTCAGATTTTCATTTTACCAATAGTTGAGAACACCCTTGTGTGACGATTTCAAGATGTTAACAATGTTTGTTGTACGTGCAGACAACTCAACAAATGCAGATTCCATTATCTTTTGCTGACGCTGTTATTGGAACTGCCGGTGCTAGTATTAGCTACATTCGTCGCGCTAGTGGGGCAACTGTTACTATCCAAGAAACGAGGGGAGTCCCTGGAGAAATGACGGTAGAAATGAGTGGAACTGCTTCTCAAGTTCAAGCCGCCCAGCAGCTTATACAGGCAATTACTTTTTCTGGTCCTTTTGATTTTGCATCTTCATATAATGAAGACTTTAGATATGATGCCATCTTTCAATAAAAAGTTCTTTTACTTCATCTTTTTTTCTTTCTTTCCTTCTTCTTGTTCATTTATTTATTTCTTTAAAAAATTAAAAATTCCTGGAAGCACAAGGTGGGAAAGGGTTTGATGGATTTCTACTGTGTCAGTTCTGTCTGGTTGCTCGACTTGAACCTAACTTGATGAGGATATGAATCTCAATCCATTAGGGCATCTAGTCAGAGATAACTTTTCTCATTAGAATAGGCAGGAGAAAATGTTTTTTCTTTGAAAAATAGTTTTAAGTATAGGTTTAGTCCATGAACTTTCAGCTGAAAGTGTTTCAATGTTTCTTGAATTTTCAATTATATATCTAAGACTTGCTAATCATTTTTATTGGATTAGAAATTGAAAGCATAGAATTTTATTGGACATTGAATTCAAATTATATTTATTAAATCAGTTAATTTTTTGAAAATTTTGAATATGCCCATTGGTCATGACGTTAAATATAATTTGAGGGACTTGGACATTTTTCAATTCAAGGACCCAAGACAAAAATTAAAAATTCAAAACATTGTTACACTTTTTAAAGTTTGGGACAAAATAGTGAGTTCGTAATTTTACCAAAAAAAAAAAAGAAAGAAAAAGAAAACATTCTGTACGAACAAAAGGTCGGGTGGCTCTAACAGTTGACATTGTATAAGTTCCTTCTTTTCAATTATTCTTTTTGGAGATAATTCACGTCTATAAGTTTTCTGATGTGGTGGTGTCCTTTTTAGACCTGATTAATTTTGATTGGAAGGCAACATTACTAGTCTGGTCTTCGTCTTTGGTGCAATGTACAGCCTTTAAATATCCTTATTTAATTGTGTTGCAGAATTTTATGGCCGGTGCTGGAGCTCCAGCCCAACCTCAAGCTGGGGTTTCGACAGACCAAAGCTACAACTCATATGCTGCTCATGGTTCAGTTTACGCGTCTCCCCCTGCAAACCCAGCAGCTCATGCTGGTCATGCTGGAGGCTATGGCTCTGTTTACGGTACGAATTATGGGTACTAAGCCTTTGGTCACTGGAACTCCATCATTAGAAAGATTTGTATCATGTAGCTTCTTTTTAATCAGCTTTTTTTGAAACATACTCTACCTGAACGAACGCCTTTAGAACCGTTCTCTACATTAGCCTATTTTGTGTGGTTTAGTGAATTCAGTCTGAGATTTTAGCACTGGCTTATTTTTGACTACATGTGATGGACATTTTAAGAGAAGTCCCACAACATTGTCGGACCCAAAAAATTTGAACTTGTATGAGAATTAGAATGTCTAAGAGTTTTTTTAGATTCTTAATTAATTTGGTTAATCTTTATGTCGATTCATATCCATCCAAATTATACAATGTTAATTTACTTATATTTGGGAATAAGACGTGTCTGCCGCTTAGAAACAGCA

mRNA sequence

TACATATATATGAATTTTAGAAAATTAAAGGGAAAATAAAAACATTTTCTCAATTCTCTTTGGATAAGAAACGAAAAAGGAAATGAAAAAGAAAAAGAAAAAACGATTATAAGATAAAATCCACCGGCCTTGTCTACCATTGTGGTCGCAAGCCCTCTCCTGTCTCTCTCTCTTCCTCTCCAAATATCTAAAACCCTAGAAAGCCACATTCGATTTTCCAGTTATTCTTTCATTCTTCTACTACCTCTCCTCGATTCTTCTGTAGTTTAATCTGTAAGAAACACATGGCTGATGTGGAACAGAACTATACGCATGTTGTCGATGATAATCAAGTAGATGAGAATGCACAAATATATGAGAATGCTCAGGTACATGACACTACACTGGAACAGGAAAATATACAGGAGGCAGAGAACTTGCACGAACTTCAGAATGAACACATACCAGAAACCTTAGAGTCTGAGCCAAAACAGGTGCATAATGAGGATCCTCTAACTGTTGTAAGTGAGAAGAAGTGGCCTGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCTGCCCAAAAGGTTGGTAGTATAATCGGTCGCAAAGGTGAGTTTATCAAGAAAATAGTTGAGGAAACGAGAGCTCGGATTAAAATTCTTGATGGTCCTCCAGGAACAGCAGAAAGAGCTGTAATGGTGTCTGCAAAGGACGAACCCGATTCTGCTTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGCATTGTTGATGGTCTGGAGGGTGATAATGCTCATGCTCCCAACATGGGAGGTAAAGTCTCAACGAGACTGCTTGTGGCAGCTTCACAAGCAGGAAGTTTAATTGGGAAGCAGGGTGGGACTGTTAAATCCATTCAAGAAGAGTCAAACTGTATAGTTAGAGTTCTTGGATCAGAAGATTTACCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGTGATCCAGCTGGTGTGCACAAAGCAGTGGAACTCATTGCTTCCCATCTTAGAAAGTTTCTTGTTGATCGAAGTATTATCCCAGTTTTTGAAATGAATATGGAGCACATGCCGCCACCACCACACCAACCCTGGGGACCGCCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGCTTTGGACCGAATCCTCCTCAATATATGCCACCTCCTCGTCAATTTGACAATTATTATCCACCTGCTGAAATGCAATCGGTTATGGATAAGCAGCCCCATCATGGAATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTTCATGCAGCATCAAATGCACAGTCAGCACCATCAATTGTCACCCAGACAACTCAACAAATGCAGATTCCATTATCTTTTGCTGACGCTGTTATTGGAACTGCCGGTGCTAGTATTAGCTACATTCGTCGCGCTAGTGGGGCAACTGTTACTATCCAAGAAACGAGGGGAGTCCCTGGAGAAATGACGGTAGAAATGAGTGGAACTGCTTCTCAAAATTTTATGGCCGGTGCTGGAGCTCCAGCCCAACCTCAAGCTGGGGTTTCGACAGACCAAAGCTACAACTCATATGCTGCTCATGGTTCAGTTTACGCGTCTCCCCCTGCAAACCCAGCAGCTCATGCTGGTCATGCTGGAGGCTATGGCTCTGTTTACGGTACGAATTATGGGTACTAAGCCTTTGGTCACTGGAACTCCATCATTAGAAAGATTTGTATCATGTAGCTTCTTTTTAATCAGCTTTTTTTGAAACATACTCTACCTGAACGAACGCCTTTAGAACCGTTCTCTACATTAGCCTATTTTGTGTGGTTTAGTGAATTCAGTCTGAGATTTTAGCACTGGCTTATTTTTGACTACATGTGATGGACATTTTAAGAGAAGTCCCACAACATTGTCGGACCCAAAAAATTTGAACTTGTATGAGAATTAGAATGTCTAAGAGTTTTTTTAGATTCTTAATTAATTTGGTTAATCTTTATGTCGATTCATATCCATCCAAATTATACAATGTTAATTTACTTATATTTGGGAATAAGACGTGTCTGCCGCTTAGAAACAGCA

Coding sequence (CDS)

ATGGCTGATGTGGAACAGAACTATACGCATGTTGTCGATGATAATCAAGTAGATGAGAATGCACAAATATATGAGAATGCTCAGGTACATGACACTACACTGGAACAGGAAAATATACAGGAGGCAGAGAACTTGCACGAACTTCAGAATGAACACATACCAGAAACCTTAGAGTCTGAGCCAAAACAGGTGCATAATGAGGATCCTCTAACTGTTGTAAGTGAGAAGAAGTGGCCTGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCTGCCCAAAAGGTTGGTAGTATAATCGGTCGCAAAGGTGAGTTTATCAAGAAAATAGTTGAGGAAACGAGAGCTCGGATTAAAATTCTTGATGGTCCTCCAGGAACAGCAGAAAGAGCTGTAATGGTGTCTGCAAAGGACGAACCCGATTCTGCTTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGCATTGTTGATGGTCTGGAGGGTGATAATGCTCATGCTCCCAACATGGGAGGTAAAGTCTCAACGAGACTGCTTGTGGCAGCTTCACAAGCAGGAAGTTTAATTGGGAAGCAGGGTGGGACTGTTAAATCCATTCAAGAAGAGTCAAACTGTATAGTTAGAGTTCTTGGATCAGAAGATTTACCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGTGATCCAGCTGGTGTGCACAAAGCAGTGGAACTCATTGCTTCCCATCTTAGAAAGTTTCTTGTTGATCGAAGTATTATCCCAGTTTTTGAAATGAATATGGAGCACATGCCGCCACCACCACACCAACCCTGGGGACCGCCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGCTTTGGACCGAATCCTCCTCAATATATGCCACCTCCTCGTCAATTTGACAATTATTATCCACCTGCTGAAATGCAATCGGTTATGGATAAGCAGCCCCATCATGGAATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTTCATGCAGCATCAAATGCACAGTCAGCACCATCAATTGTCACCCAGACAACTCAACAAATGCAGATTCCATTATCTTTTGCTGACGCTGTTATTGGAACTGCCGGTGCTAGTATTAGCTACATTCGTCGCGCTAGTGGGGCAACTGTTACTATCCAAGAAACGAGGGGAGTCCCTGGAGAAATGACGGTAGAAATGAGTGGAACTGCTTCTCAAAATTTTATGGCCGGTGCTGGAGCTCCAGCCCAACCTCAAGCTGGGGTTTCGACAGACCAAAGCTACAACTCATATGCTGCTCATGGTTCAGTTTACGCGTCTCCCCCTGCAAACCCAGCAGCTCATGCTGGTCATGCTGGAGGCTATGGCTCTGTTTACGGTACGAATTATGGGTACTAA

Protein sequence

MADVEQNYTHVVDDNQVDENAQIYENAQVHDTTLEQENIQEAENLHELQNEHIPETLESEPKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMEHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMAGAGAPAQPQAGVSTDQSYNSYAAHGSVYASPPANPAAHAGHAGGYGSVYGTNYGY

Homology

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BLAST of Lsi11G004250 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 2.7e-149
Identity = 313/488 (64.14%), Postives = 351/488 (71.93%), Query Frame = 0


Query: 10  HVVDDNQVDENAQIYENAQVHDTTLEQENIQ-----EAENLHELQN-----EHIPETLES 69
           H  DD Q     Q  E  Q+ D   +Q   Q     +  N  E+Q+     E IPE LES
Sbjct: 104 HSQDDLQYQPQNQ--EQFQLQDEAHDQAQYQAQGDVQDHNGDEVQDKVEDEEGIPEHLES 163

Query: 70  EPKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIK 129
             K    ED      EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKKIVEETRARIK
Sbjct: 164 LQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIK 223

Query: 130 ILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTR 189
           ILDGPPGT ERAVMVS K+EP+S+ PP++DGLLRVH RIVDGL+G+ + AP    KVSTR
Sbjct: 224 ILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAP-PPSKVSTR 283

Query: 190 LLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHK 249
           LLV ASQAGSLIGKQGGTVK+IQE S CIVRVLGSEDLPVFALQDDRVVEV+G+P  VH+
Sbjct: 284 LLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHR 343

Query: 250 AVELIASHLRKFLVDRSIIPVFE-------MNMEHMPPPPHQPWGPPQGMPPNAGGGPGF 309
           A+ELIASHLRKFLVDRSIIP FE         M+HM PPPHQ WGPPQG  P+ GGG G+
Sbjct: 344 ALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHM-PPPHQSWGPPQGHAPSVGGG-GY 403

Query: 310 GPNPPQYMPPPRQFDNYYPPAEM-QSVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 369
           G NPP YM PP + D+YYPP EM Q  M+KQPH GISAYGRE PM VH +S   + P + 
Sbjct: 404 GHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS---APPMVA 463

Query: 370 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS--- 429
            Q TQQMQIPLS+ADAVIGT+G++ISY RR SGATVTIQETRGVPGEMTVE+SGT S   
Sbjct: 464 QQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQ 523

Query: 430 ------QNFM--AGAGAPAQPQAGVSTDQSYNSYAAHGSVYASPPANPAAHAGHAGGYGS 469
                 QNFM  AGA APAQPQ      Q YN YA HGSVYA+ P NP       GGY +
Sbjct: 524 TAVQLIQNFMAEAGAPAPAQPQTVAPEQQGYNPYATHGSVYAAAPTNP------PGGYAT 577

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BLAST of Lsi11G004250 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.0e-63
Identity = 149/342 (43.57%), Postives = 211/342 (61.70%), Query Frame = 0


Query: 74  SEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVM 133
           +E++WPGWPG+ VFRM+VP  KVG+IIGRKG+FIKK+ EETRARIK+LDGP  T +R V+
Sbjct: 63  AEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVL 122

Query: 134 VSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVST-RLLVAASQAGSLIG 193
           +S K+EP++   PA+D +LRV +R+    + D+    N G   S+ RLLVA++QA +LIG
Sbjct: 123 ISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIG 182

Query: 194 KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 253
           KQG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+   + KA+E I  HLR+FL
Sbjct: 183 KQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFL 242

Query: 254 VDRSIIPVFEMNMEHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPRQFDNYYPP 313
           VD +++P+FE           Q         P A             M P         P
Sbjct: 243 VDHTVVPLFEKQYLARVSQTRQE-------EPLAESKSSLHTISSNLMEPDFSLLARREP 302

Query: 314 --AEMQSVMDK--QPHHGISAYGREAPMGV-HAASNAQSAPSIVTQTTQQMQIPLSFADA 373
              E  S +D   QP  G+S Y ++  +   H+   A+ + + VTQ +Q MQIP S+A+ 
Sbjct: 303 LFLERDSRVDSRVQP-SGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAED 362

Query: 374 VIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ 410
           +IG  GA+I+YIRR SGAT+TI+E+   P ++TVE+ GT SQ
Sbjct: 363 IIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQ 395

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BLAST of Lsi11G004250 vs. ExPASy Swiss-Prot
Match: Q5E9A3 (Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 GN=PCBP1 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 6.2e-13
Identity = 93/340 (27.35%), Postives = 153/340 (45.00%), Query Frame = 0


Query: 88  RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSAFPPA 147
           R+L+  ++VGSIIG+KGE +K+I EE+ ARI I +G     ER + ++            
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTG----------P 76

Query: 148 VDGLLRVHKRIVDGLEGD-NAHAPNMGG----KVSTRLLVAASQAGSLIGKQGGTVKSIQ 207
            + + +    I+D LE D N+   N        V+ RL+V A+Q GSLIGK G  +K I+
Sbjct: 77  TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIR 136

Query: 208 EESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFE 267
           E +   V+V G     +     +R + + G P  V + V+ I   + + L       V  
Sbjct: 137 ESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 196

Query: 268 MNMEHMPPPPHQPWGPPQGMPPNAGGGPGF-----GPNPPQYMPPPRQFDNYYPPAEMQS 327
           +  + MP          Q    +A G P       GP    Y    +   +    A++  
Sbjct: 197 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ 256

Query: 328 VMDKQPHHGISAYGREAPMGVHAAS----NAQSAPSIVTQTTQQMQIPLSFADAVIGTAG 387
           V  +Q H  +  +G     G+ ++S       ++    TQTT ++ IP +    +IG  G
Sbjct: 257 VARQQSHFAM-MHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 316

Query: 388 ASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMA 414
           A+I+ IR+ SGA + I           V ++G+A+   +A
Sbjct: 317 ANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLA 339

[Close]

BLAST of Lsi11G004250 vs. ExPASy Swiss-Prot
Match: Q15365 (Poly(rC)-binding protein 1 OS=Homo sapiens OX=9606 GN=PCBP1 PE=1 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 6.2e-13
Identity = 93/340 (27.35%), Postives = 153/340 (45.00%), Query Frame = 0


Query: 88  RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSAFPPA 147
           R+L+  ++VGSIIG+KGE +K+I EE+ ARI I +G     ER + ++            
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTG----------P 76

Query: 148 VDGLLRVHKRIVDGLEGD-NAHAPNMGG----KVSTRLLVAASQAGSLIGKQGGTVKSIQ 207
            + + +    I+D LE D N+   N        V+ RL+V A+Q GSLIGK G  +K I+
Sbjct: 77  TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIR 136

Query: 208 EESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFE 267
           E +   V+V G     +     +R + + G P  V + V+ I   + + L       V  
Sbjct: 137 ESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 196

Query: 268 MNMEHMPPPPHQPWGPPQGMPPNAGGGPGF-----GPNPPQYMPPPRQFDNYYPPAEMQS 327
           +  + MP          Q    +A G P       GP    Y    +   +    A++  
Sbjct: 197 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ 256

Query: 328 VMDKQPHHGISAYGREAPMGVHAAS----NAQSAPSIVTQTTQQMQIPLSFADAVIGTAG 387
           V  +Q H  +  +G     G+ ++S       ++    TQTT ++ IP +    +IG  G
Sbjct: 257 VARQQSHFAM-MHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 316

Query: 388 ASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMA 414
           A+I+ IR+ SGA + I           V ++G+A+   +A
Sbjct: 317 ANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLA 339

[Close]

BLAST of Lsi11G004250 vs. ExPASy Swiss-Prot
Match: P60335 (Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 6.2e-13
Identity = 93/340 (27.35%), Postives = 153/340 (45.00%), Query Frame = 0


Query: 88  RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSAFPPA 147
           R+L+  ++VGSIIG+KGE +K+I EE+ ARI I +G     ER + ++            
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTG----------P 76

Query: 148 VDGLLRVHKRIVDGLEGD-NAHAPNMGG----KVSTRLLVAASQAGSLIGKQGGTVKSIQ 207
            + + +    I+D LE D N+   N        V+ RL+V A+Q GSLIGK G  +K I+
Sbjct: 77  TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIR 136

Query: 208 EESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFE 267
           E +   V+V G     +     +R + + G P  V + V+ I   + + L       V  
Sbjct: 137 ESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 196

Query: 268 MNMEHMPPPPHQPWGPPQGMPPNAGGGPGF-----GPNPPQYMPPPRQFDNYYPPAEMQS 327
           +  + MP          Q    +A G P       GP    Y    +   +    A++  
Sbjct: 197 IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ 256

Query: 328 VMDKQPHHGISAYGREAPMGVHAAS----NAQSAPSIVTQTTQQMQIPLSFADAVIGTAG 387
           V  +Q H  +  +G     G+ ++S       ++    TQTT ++ IP +    +IG  G
Sbjct: 257 VARQQSHFAM-MHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQG 316

Query: 388 ASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMA 414
           A+I+ IR+ SGA + I           V ++G+A+   +A
Sbjct: 317 ANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLA 339

[Close]

BLAST of Lsi11G004250 vs. ExPASy TrEMBL
Match: A0A5D3D4G7 (Flowering locus K-like proteiny domain isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001640 PE=4 SV=1)

HSP 1 Score: 866.3 bits (2237), Expect = 5.8e-248
Identity = 456/486 (93.83%), Postives = 459/486 (94.44%), Query Frame = 0


Query: 1   MADVEQNYTHVVDDNQVDENAQIYENAQVHDTTLEQENIQEAENLHELQNEHIPETLESE 60
           MADVEQNYTHVVDD+QVDENAQIYENAQVHD TLEQEN QE ENLHELQNEHIPETLESE
Sbjct: 1   MADVEQNYTHVVDDDQVDENAQIYENAQVHDITLEQENTQEVENLHELQNEHIPETLESE 60

Query: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPN G KVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--------EHMPPPPHQPWGPPQGMPPNAGGGPGF 300
           VELIASHLRKFLVDRSIIPVFEMNM        +HMPPPPHQPWGPPQGMPPNAGGGPGF
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGF 300

Query: 301 GPNPPQYM-PPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 360
           GPNPPQYM PPPRQFDNYYPPAEMQ+VMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV
Sbjct: 301 GPNPPQYMPPPPRQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 360

Query: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS--- 420
           TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS   
Sbjct: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQ 420

Query: 421 ------QNFMAGAGAPAQPQAGVSTDQSYNSYAAHGSVYASPPANPAAHAGHAGGYGSVY 469
                 QNFMAGAGAPAQPQAGVSTDQ YNSYAAHGSVYASPPANPAA   HAGGYGSVY
Sbjct: 421 AAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAA---HAGGYGSVY 480

[Close]

BLAST of Lsi11G004250 vs. ExPASy TrEMBL
Match: A0A1S3C2U6 (flowering locus K homology domain isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496231 PE=4 SV=1)

HSP 1 Score: 866.3 bits (2237), Expect = 5.8e-248
Identity = 456/486 (93.83%), Postives = 459/486 (94.44%), Query Frame = 0


Query: 1   MADVEQNYTHVVDDNQVDENAQIYENAQVHDTTLEQENIQEAENLHELQNEHIPETLESE 60
           MADVEQNYTHVVDD+QVDENAQIYENAQVHD TLEQEN QE ENLHELQNEHIPETLESE
Sbjct: 1   MADVEQNYTHVVDDDQVDENAQIYENAQVHDITLEQENTQEVENLHELQNEHIPETLESE 60

Query: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPN G KVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--------EHMPPPPHQPWGPPQGMPPNAGGGPGF 300
           VELIASHLRKFLVDRSIIPVFEMNM        +HMPPPPHQPWGPPQGMPPNAGGGPGF
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGF 300

Query: 301 GPNPPQYM-PPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 360
           GPNPPQYM PPPRQFDNYYPPAEMQ+VMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV
Sbjct: 301 GPNPPQYMPPPPRQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 360

Query: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS--- 420
           TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS   
Sbjct: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQ 420

Query: 421 ------QNFMAGAGAPAQPQAGVSTDQSYNSYAAHGSVYASPPANPAAHAGHAGGYGSVY 469
                 QNFMAGAGAPAQPQAGVSTDQ YNSYAAHGSVYASPPANPAA   HAGGYGSVY
Sbjct: 421 AAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAA---HAGGYGSVY 480

[Close]

BLAST of Lsi11G004250 vs. ExPASy TrEMBL
Match: A0A0A0LJ91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010230 PE=4 SV=1)

HSP 1 Score: 861.3 bits (2224), Expect = 1.9e-246
Identity = 454/486 (93.42%), Postives = 458/486 (94.24%), Query Frame = 0


Query: 1   MADVEQNYTHVVDDNQVDENAQIYENAQVHDTTLEQENIQEAENLHELQNEHIPETLESE 60
           MADVEQNYTHVVDD+QVDENAQIYENAQVHD TLEQEN QE ENLHELQNEHIPETLESE
Sbjct: 27  MADVEQNYTHVVDDDQVDENAQIYENAQVHDITLEQENAQEVENLHELQNEHIPETLESE 86

Query: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVH EDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 87  PKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 146

Query: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPN G KVSTRL
Sbjct: 147 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRL 206

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA
Sbjct: 207 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 266

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--------EHMPPPPHQPWGPPQGMPPNAGGGPGF 300
           VELIASHLRKFLVDRSIIPVFEMNM        +HMPPPPHQPWGPPQGMPPNAGGGPGF
Sbjct: 267 VELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGF 326

Query: 301 GPNPPQYM-PPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 360
           GPNPPQYM PPPRQFDNYYPPAEMQ+VM+KQPHHGISAYGREAPMGVHAASNAQSAPSIV
Sbjct: 327 GPNPPQYMPPPPRQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIV 386

Query: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS--- 420
           TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS   
Sbjct: 387 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQ 446

Query: 421 ------QNFMAGAGAPAQPQAGVSTDQSYNSYAAHGSVYASPPANPAAHAGHAGGYGSVY 469
                 QNFMAGAGAPAQPQAGVSTDQ YNSYAAHGSVYASPPANPAA   HAGGYGSVY
Sbjct: 447 AAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAA---HAGGYGSVY 506

[Close]

BLAST of Lsi11G004250 vs. ExPASy TrEMBL
Match: A0A1S3C3F3 (flowering locus K homology domain isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496231 PE=4 SV=1)

HSP 1 Score: 859.8 bits (2220), Expect = 5.4e-246
Identity = 455/486 (93.62%), Postives = 458/486 (94.24%), Query Frame = 0


Query: 1   MADVEQNYTHVVDDNQVDENAQIYENAQVHDTTLEQENIQEAENLHELQNEHIPETLESE 60
           MADVEQNYTHVVDD+QVDENAQIYENAQVHD TLEQEN QE ENLHELQNEHIPETLESE
Sbjct: 1   MADVEQNYTHVVDDDQVDENAQIYENAQVHDITLEQENTQEVENLHELQNEHIPETLESE 60

Query: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPN G KVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGS DLPVFALQDDRVVEVLGDPAGVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGS-DLPVFALQDDRVVEVLGDPAGVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--------EHMPPPPHQPWGPPQGMPPNAGGGPGF 300
           VELIASHLRKFLVDRSIIPVFEMNM        +HMPPPPHQPWGPPQGMPPNAGGGPGF
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGF 300

Query: 301 GPNPPQYM-PPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 360
           GPNPPQYM PPPRQFDNYYPPAEMQ+VMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV
Sbjct: 301 GPNPPQYMPPPPRQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 360

Query: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS--- 420
           TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS   
Sbjct: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQ 420

Query: 421 ------QNFMAGAGAPAQPQAGVSTDQSYNSYAAHGSVYASPPANPAAHAGHAGGYGSVY 469
                 QNFMAGAGAPAQPQAGVSTDQ YNSYAAHGSVYASPPANPAA   HAGGYGSVY
Sbjct: 421 AAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAA---HAGGYGSVY 480

[Close]

BLAST of Lsi11G004250 vs. ExPASy TrEMBL
Match: A0A6J1CPP3 (flowering locus K homology domain OS=Momordica charantia OX=3673 GN=LOC111013036 PE=4 SV=1)

HSP 1 Score: 816.2 bits (2107), Expect = 6.9e-233
Identity = 434/485 (89.48%), Postives = 446/485 (91.96%), Query Frame = 0


Query: 1   MADVEQNYTHVVDDNQVDENAQIYENAQVHDTTLEQENIQEAENLHELQNEHIPETLESE 60
           MADV+QNYTH V+DNQVDEN QIYENAQ  D TLEQ+N QE E LHEL+NEH+ ETLE E
Sbjct: 1   MADVDQNYTH-VEDNQVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPE 60

Query: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
            KQVHNED L VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  QKQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNAHAP+MGGKVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMN-------MEHMPPPPHQPWGPPQGMPPNAGGGPGFG 300
           VELIASHLRKFLVDRSIIPVFEMN       M+HM PPPHQ WGPPQGMPPNAGGGPGFG
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHM-PPPHQSWGPPQGMPPNAGGGPGFG 300

Query: 301 PNPPQYMPPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQ 360
           PN PQYMPPPRQFDNYYPPA+M SVMDKQPHHGISAYGREAPMGVHA+SNAQ+APSIVTQ
Sbjct: 301 PN-PQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQ 360

Query: 361 TTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS----- 420
           TTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS     
Sbjct: 361 TTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAA 420

Query: 421 ----QNFMAGAGAPAQPQAGVSTDQSYNSY-AAHGSVYASPPANPAAHAGHAGGYGSVYG 469
               QNFMAGAGAPAQ QAG +TDQ YNSY AAHGSVYASPPANPAAHAGHAGGYGSVYG
Sbjct: 421 QQLIQNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGGYGSVYG 480

[Close]

BLAST of Lsi11G004250 vs. NCBI nr
Match: XP_038877255.1 (flowering locus K homology domain isoform X1 [Benincasa hispida] >XP_038877256.1 flowering locus K homology domain isoform X1 [Benincasa hispida] >XP_038877257.1 flowering locus K homology domain isoform X1 [Benincasa hispida])

HSP 1 Score: 877.1 bits (2265), Expect = 6.8e-251
Identity = 459/486 (94.44%), Postives = 465/486 (95.68%), Query Frame = 0


Query: 1   MADVEQNYTHVVDDNQVDENAQIYENAQVHDTTLEQENIQEAENLHELQNEHIPETLESE 60
           MADVEQNYTHVVDDNQVDE+AQIYENAQVH+TTLEQEN QEAENLH+LQNEHIPETLESE
Sbjct: 1   MADVEQNYTHVVDDNQVDESAQIYENAQVHETTLEQENTQEAENLHDLQNEHIPETLESE 60

Query: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLG+EDLPVFALQDDRVVEVLGDPAGVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPAGVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMN-------MEHMPPPPHQPWGPPQGMPPNAGGGPGFG 300
           VELIASHLRKFLVDRSIIPVFEMN       MEHMPPPPHQPWGPPQGMPPNAGGGPGFG
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMQNPQMEHMPPPPHQPWGPPQGMPPNAGGGPGFG 300

Query: 301 PNPPQYMPPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPM-GVHAASNAQSAPSIV- 360
           PNPPQYMPPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPM GVHAASNAQSAPS+V 
Sbjct: 301 PNPPQYMPPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPMSGVHAASNAQSAPSVVT 360

Query: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS--- 420
           TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS   
Sbjct: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQ 420

Query: 421 ------QNFMAGAGAPAQPQAGVSTDQSYNSYAAHGSVYASPPANPAAHAGHAGGYGSVY 469
                 QNFMAGAGAPAQPQ GVSTDQ YNSYAAHGSVYASPPANPAAHAGHAGGYG+VY
Sbjct: 421 AAQQLIQNFMAGAGAPAQPQTGVSTDQGYNSYAAHGSVYASPPANPAAHAGHAGGYGNVY 480

[Close]

BLAST of Lsi11G004250 vs. NCBI nr
Match: XP_038877258.1 (flowering locus K homology domain isoform X2 [Benincasa hispida])

HSP 1 Score: 870.5 bits (2248), Expect = 6.4e-249
Identity = 458/486 (94.24%), Postives = 464/486 (95.47%), Query Frame = 0


Query: 1   MADVEQNYTHVVDDNQVDENAQIYENAQVHDTTLEQENIQEAENLHELQNEHIPETLESE 60
           MADVEQNYTHVVDDNQVDE+AQIYENAQVH+TTLEQEN QEAENLH+LQNEHIPETLESE
Sbjct: 1   MADVEQNYTHVVDDNQVDESAQIYENAQVHETTLEQENTQEAENLHDLQNEHIPETLESE 60

Query: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLG+ DLPVFALQDDRVVEVLGDPAGVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGT-DLPVFALQDDRVVEVLGDPAGVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMN-------MEHMPPPPHQPWGPPQGMPPNAGGGPGFG 300
           VELIASHLRKFLVDRSIIPVFEMN       MEHMPPPPHQPWGPPQGMPPNAGGGPGFG
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMQNPQMEHMPPPPHQPWGPPQGMPPNAGGGPGFG 300

Query: 301 PNPPQYMPPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPM-GVHAASNAQSAPSIV- 360
           PNPPQYMPPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPM GVHAASNAQSAPS+V 
Sbjct: 301 PNPPQYMPPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPMSGVHAASNAQSAPSVVT 360

Query: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS--- 420
           TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS   
Sbjct: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQ 420

Query: 421 ------QNFMAGAGAPAQPQAGVSTDQSYNSYAAHGSVYASPPANPAAHAGHAGGYGSVY 469
                 QNFMAGAGAPAQPQ GVSTDQ YNSYAAHGSVYASPPANPAAHAGHAGGYG+VY
Sbjct: 421 AAQQLIQNFMAGAGAPAQPQTGVSTDQGYNSYAAHGSVYASPPANPAAHAGHAGGYGNVY 480

[Close]

BLAST of Lsi11G004250 vs. NCBI nr
Match: XP_008456230.1 (PREDICTED: flowering locus K homology domain isoform X1 [Cucumis melo] >KAA0063589.1 flowering locus K-like proteiny domain isoform X1 [Cucumis melo var. makuwa] >TYK18438.1 flowering locus K-like proteiny domain isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 866.3 bits (2237), Expect = 1.2e-247
Identity = 456/486 (93.83%), Postives = 459/486 (94.44%), Query Frame = 0


Query: 1   MADVEQNYTHVVDDNQVDENAQIYENAQVHDTTLEQENIQEAENLHELQNEHIPETLESE 60
           MADVEQNYTHVVDD+QVDENAQIYENAQVHD TLEQEN QE ENLHELQNEHIPETLESE
Sbjct: 1   MADVEQNYTHVVDDDQVDENAQIYENAQVHDITLEQENTQEVENLHELQNEHIPETLESE 60

Query: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPN G KVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--------EHMPPPPHQPWGPPQGMPPNAGGGPGF 300
           VELIASHLRKFLVDRSIIPVFEMNM        +HMPPPPHQPWGPPQGMPPNAGGGPGF
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGF 300

Query: 301 GPNPPQYM-PPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 360
           GPNPPQYM PPPRQFDNYYPPAEMQ+VMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV
Sbjct: 301 GPNPPQYMPPPPRQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 360

Query: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS--- 420
           TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS   
Sbjct: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQ 420

Query: 421 ------QNFMAGAGAPAQPQAGVSTDQSYNSYAAHGSVYASPPANPAAHAGHAGGYGSVY 469
                 QNFMAGAGAPAQPQAGVSTDQ YNSYAAHGSVYASPPANPAA   HAGGYGSVY
Sbjct: 421 AAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAA---HAGGYGSVY 480

[Close]

BLAST of Lsi11G004250 vs. NCBI nr
Match: XP_004139248.1 (flowering locus K homology domain isoform X1 [Cucumis sativus] >XP_031736962.1 flowering locus K homology domain isoform X1 [Cucumis sativus] >KAE8651554.1 hypothetical protein Csa_019400 [Cucumis sativus])

HSP 1 Score: 861.3 bits (2224), Expect = 3.9e-246
Identity = 454/486 (93.42%), Postives = 458/486 (94.24%), Query Frame = 0


Query: 1   MADVEQNYTHVVDDNQVDENAQIYENAQVHDTTLEQENIQEAENLHELQNEHIPETLESE 60
           MADVEQNYTHVVDD+QVDENAQIYENAQVHD TLEQEN QE ENLHELQNEHIPETLESE
Sbjct: 1   MADVEQNYTHVVDDDQVDENAQIYENAQVHDITLEQENAQEVENLHELQNEHIPETLESE 60

Query: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVH EDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPN G KVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--------EHMPPPPHQPWGPPQGMPPNAGGGPGF 300
           VELIASHLRKFLVDRSIIPVFEMNM        +HMPPPPHQPWGPPQGMPPNAGGGPGF
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGF 300

Query: 301 GPNPPQYM-PPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 360
           GPNPPQYM PPPRQFDNYYPPAEMQ+VM+KQPHHGISAYGREAPMGVHAASNAQSAPSIV
Sbjct: 301 GPNPPQYMPPPPRQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQSAPSIV 360

Query: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS--- 420
           TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS   
Sbjct: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQ 420

Query: 421 ------QNFMAGAGAPAQPQAGVSTDQSYNSYAAHGSVYASPPANPAAHAGHAGGYGSVY 469
                 QNFMAGAGAPAQPQAGVSTDQ YNSYAAHGSVYASPPANPAA   HAGGYGSVY
Sbjct: 421 AAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAA---HAGGYGSVY 480

[Close]

BLAST of Lsi11G004250 vs. NCBI nr
Match: XP_008456234.1 (PREDICTED: flowering locus K homology domain isoform X2 [Cucumis melo])

HSP 1 Score: 859.8 bits (2220), Expect = 1.1e-245
Identity = 455/486 (93.62%), Postives = 458/486 (94.24%), Query Frame = 0


Query: 1   MADVEQNYTHVVDDNQVDENAQIYENAQVHDTTLEQENIQEAENLHELQNEHIPETLESE 60
           MADVEQNYTHVVDD+QVDENAQIYENAQVHD TLEQEN QE ENLHELQNEHIPETLESE
Sbjct: 1   MADVEQNYTHVVDDDQVDENAQIYENAQVHDITLEQENTQEVENLHELQNEHIPETLESE 60

Query: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPN G KVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGS DLPVFALQDDRVVEVLGDPAGVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGS-DLPVFALQDDRVVEVLGDPAGVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--------EHMPPPPHQPWGPPQGMPPNAGGGPGF 300
           VELIASHLRKFLVDRSIIPVFEMNM        +HMPPPPHQPWGPPQGMPPNAGGGPGF
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPGF 300

Query: 301 GPNPPQYM-PPPRQFDNYYPPAEMQSVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 360
           GPNPPQYM PPPRQFDNYYPPAEMQ+VMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV
Sbjct: 301 GPNPPQYMPPPPRQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 360

Query: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS--- 420
           TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS   
Sbjct: 361 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQ 420

Query: 421 ------QNFMAGAGAPAQPQAGVSTDQSYNSYAAHGSVYASPPANPAAHAGHAGGYGSVY 469
                 QNFMAGAGAPAQPQAGVSTDQ YNSYAAHGSVYASPPANPAA   HAGGYGSVY
Sbjct: 421 AAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPAA---HAGGYGSVY 480

[Close]

BLAST of Lsi11G004250 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 530.0 bits (1364), Expect = 1.9e-150
Identity = 313/488 (64.14%), Postives = 351/488 (71.93%), Query Frame = 0


Query: 10  HVVDDNQVDENAQIYENAQVHDTTLEQENIQ-----EAENLHELQN-----EHIPETLES 69
           H  DD Q     Q  E  Q+ D   +Q   Q     +  N  E+Q+     E IPE LES
Sbjct: 104 HSQDDLQYQPQNQ--EQFQLQDEAHDQAQYQAQGDVQDHNGDEVQDKVEDEEGIPEHLES 163

Query: 70  EPKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIK 129
             K    ED      EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKKIVEETRARIK
Sbjct: 164 LQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIK 223

Query: 130 ILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTR 189
           ILDGPPGT ERAVMVS K+EP+S+ PP++DGLLRVH RIVDGL+G+ + AP    KVSTR
Sbjct: 224 ILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAP-PPSKVSTR 283

Query: 190 LLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHK 249
           LLV ASQAGSLIGKQGGTVK+IQE S CIVRVLGSEDLPVFALQDDRVVEV+G+P  VH+
Sbjct: 284 LLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHR 343

Query: 250 AVELIASHLRKFLVDRSIIPVFE-------MNMEHMPPPPHQPWGPPQGMPPNAGGGPGF 309
           A+ELIASHLRKFLVDRSIIP FE         M+HM PPPHQ WGPPQG  P+ GGG G+
Sbjct: 344 ALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHM-PPPHQSWGPPQGHAPSVGGG-GY 403

Query: 310 GPNPPQYMPPPRQFDNYYPPAEM-QSVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIV 369
           G NPP YM PP + D+YYPP EM Q  M+KQPH GISAYGRE PM VH +S   + P + 
Sbjct: 404 GHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS---APPMVA 463

Query: 370 TQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS--- 429
            Q TQQMQIPLS+ADAVIGT+G++ISY RR SGATVTIQETRGVPGEMTVE+SGT S   
Sbjct: 464 QQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQ 523

Query: 430 ------QNFM--AGAGAPAQPQAGVSTDQSYNSYAAHGSVYASPPANPAAHAGHAGGYGS 469
                 QNFM  AGA APAQPQ      Q YN YA HGSVYA+ P NP       GGY +
Sbjct: 524 TAVQLIQNFMAEAGAPAPAQPQTVAPEQQGYNPYATHGSVYAAAPTNP------PGGYAT 577

[Close]

BLAST of Lsi11G004250 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 243.4 bits (620), Expect = 3.6e-64
Identity = 149/342 (43.57%), Postives = 211/342 (61.70%), Query Frame = 0


Query: 74  SEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVM 133
           +E++WPGWPG+ VFRM+VP  KVG+IIGRKG+FIKK+ EETRARIK+LDGP  T +R V+
Sbjct: 63  AEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVL 122

Query: 134 VSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVST-RLLVAASQAGSLIG 193
           +S K+EP++   PA+D +LRV +R+    + D+    N G   S+ RLLVA++QA +LIG
Sbjct: 123 ISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIG 182

Query: 194 KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 253
           KQG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+   + KA+E I  HLR+FL
Sbjct: 183 KQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFL 242

Query: 254 VDRSIIPVFEMNMEHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPRQFDNYYPP 313
           VD +++P+FE           Q         P A             M P         P
Sbjct: 243 VDHTVVPLFEKQYLARVSQTRQE-------EPLAESKSSLHTISSNLMEPDFSLLARREP 302

Query: 314 --AEMQSVMDK--QPHHGISAYGREAPMGV-HAASNAQSAPSIVTQTTQQMQIPLSFADA 373
              E  S +D   QP  G+S Y ++  +   H+   A+ + + VTQ +Q MQIP S+A+ 
Sbjct: 303 LFLERDSRVDSRVQP-SGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAED 362

Query: 374 VIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ 410
           +IG  GA+I+YIRR SGAT+TI+E+   P ++TVE+ GT SQ
Sbjct: 363 IIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQ 395

[Close]

BLAST of Lsi11G004250 vs. TAIR 10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 104.0 bits (258), Expect = 3.4e-22
Identity = 99/349 (28.37%), Postives = 160/349 (45.85%), Query Frame = 0


Query: 84  ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
           E  FR+L PA KVGS+IG+ G  ++ +  E+ A IK+ D    + ER +++SA++  +  
Sbjct: 275 EVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERR 334

Query: 144 FPPAVDGLLRVHKRIVD-GLEGDNAHAPNMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQ 203
              A DG++RVH RIV+ G E   A        V  RLLV +   G L+GK G  +  ++
Sbjct: 335 HSLAQDGVMRVHNRIVEIGFEPSAA--------VVARLLVHSPYIGRLLGKGGHLISEMR 394

Query: 204 EESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFE 263
             +   +RV   +    +  Q D +V+V+G+   V  A+  I   LR+ +     +P   
Sbjct: 395 RATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFP-GRLPFQG 454

Query: 264 MNMEHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPRQFDNYY--------PPA- 323
           M      PPP  P+  P   PP   G   +  +P +Y  P   F   +        PP  
Sbjct: 455 MG----GPPP--PFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGP 514

Query: 324 ---EMQSVMDKQPHHGISAY-GREAPMGVHAASNAQSAP-----SIVTQTTQQMQIPLSF 383
                 S M   P  GI  + G   P  V+     ++ P      ++T    ++ IP ++
Sbjct: 515 GFDRPPSPMSWTPQPGIDGHPGGMVPPDVNHGFALRNEPIGSENPVMTSANVEIVIPQAY 574

Query: 384 ADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMA 414
              V G   ++++YI++ SGA V + + +    E  V +SGT+ Q   A
Sbjct: 575 LGHVYGENCSNLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSDQAHFA 608

[Close]

BLAST of Lsi11G004250 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 94.7 bits (234), Expect = 2.0e-19
Identity = 81/328 (24.70%), Postives = 148/328 (45.12%), Query Frame = 0


Query: 84  ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
           ++VFR L P +K+GS+IGR G+ +K++  +TR++I+I +  PG  ER + + +  +  +A
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 144 F-------PPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRLLVAASQAGSLIGKQGG 203
           F        PA D L R+H R+V   +  +  +P    +V+ +LLV + Q G ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVAD-DARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQ 168

Query: 204 TVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRS 263
            V++I+ E+   +R++   ++P+ AL  D ++++ G+   V KA+  IAS L +      
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE------ 228

Query: 264 IIPVFEMNMEHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPRQFDNYYPPAEMQ 323
                  N            G P G   +  GGP      P                   
Sbjct: 229 -------NPSRSQNLLSSSGGYPAGSLMSHAGGPRLVGLAPL------------------ 288

Query: 324 SVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASI 383
                     + +YGR+A                 T+   ++  P+    +VIG  GA I
Sbjct: 289 ----------MGSYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALI 334

Query: 384 SYIRRASGATVTIQETRGVPGEMTVEMS 405
           + +R+ + AT+ +  +R    +  + +S
Sbjct: 349 NQLRQETRATIKVDSSRTEGNDCLITIS 334

[Close]

BLAST of Lsi11G004250 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 94.7 bits (234), Expect = 2.0e-19
Identity = 81/328 (24.70%), Postives = 148/328 (45.12%), Query Frame = 0


Query: 84  ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
           ++VFR L P +K+GS+IGR G+ +K++  +TR++I+I +  PG  ER + + +  +  +A
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 144 F-------PPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRLLVAASQAGSLIGKQGG 203
           F        PA D L R+H R+V   +  +  +P    +V+ +LLV + Q G ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVAD-DARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQ 168

Query: 204 TVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRS 263
            V++I+ E+   +R++   ++P+ AL  D ++++ G+   V KA+  IAS L +      
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE------ 228

Query: 264 IIPVFEMNMEHMPPPPHQPWGPPQGMPPNAGGGPGFGPNPPQYMPPPRQFDNYYPPAEMQ 323
                  N            G P G   +  GGP      P                   
Sbjct: 229 -------NPSRSQNLLSSSGGYPAGSLMSHAGGPRLVGLAPL------------------ 288

Query: 324 SVMDKQPHHGISAYGREAPMGVHAASNAQSAPSIVTQTTQQMQIPLSFADAVIGTAGASI 383
                     + +YGR+A                 T+   ++  P+    +VIG  GA I
Sbjct: 289 ----------MGSYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALI 334

Query: 384 SYIRRASGATVTIQETRGVPGEMTVEMS 405
           + +R+ + AT+ +  +R    +  + +S
Sbjct: 349 NQLRQETRATIKVDSSRTEGNDCLITIS 334

The following BLAST results are available for this feature:

BLAST of Lsi11G004250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR13	2.7e-149	64.14	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
Q9SZH4	5.0e-63	43.57	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q5E9A3	6.2e-13	27.35	Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 GN=PCBP1 PE=2 SV=1	[more]
Q15365	6.2e-13	27.35	Poly(rC)-binding protein 1 OS=Homo sapiens OX=9606 GN=PCBP1 PE=1 SV=2	[more]
P60335	6.2e-13	27.35	Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1	[more]

BLAST of Lsi11G004250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D4G7	5.8e-248	93.83	Flowering locus K-like proteiny domain isoform X1 OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3C2U6	5.8e-248	93.83	flowering locus K homology domain isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A0A0LJ91	1.9e-246	93.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010230 PE=4 SV=1	[more]
A0A1S3C3F3	5.4e-246	93.62	flowering locus K homology domain isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1CPP3	6.9e-233	89.48	flowering locus K homology domain OS=Momordica charantia OX=3673 GN=LOC111013036...	[more]

BLAST of Lsi11G004250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877255.1	6.8e-251	94.44	flowering locus K homology domain isoform X1 [Benincasa hispida] >XP_038877256.1...	[more]
XP_038877258.1	6.4e-249	94.24	flowering locus K homology domain isoform X2 [Benincasa hispida]	[more]
XP_008456230.1	1.2e-247	93.83	PREDICTED: flowering locus K homology domain isoform X1 [Cucumis melo] >KAA00635...	[more]
XP_004139248.1	3.9e-246	93.42	flowering locus K homology domain isoform X1 [Cucumis sativus] >XP_031736962.1 f...	[more]
XP_008456234.1	1.1e-245	93.62	PREDICTED: flowering locus K homology domain isoform X2 [Cucumis melo]	[more]

BLAST of Lsi11G004250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04610.1	1.9e-150	64.14	RNA-binding KH domain-containing protein	[more]
AT4G26000.1	3.6e-64	43.57	RNA-binding KH domain-containing protein	[more]
AT1G51580.1	3.4e-22	28.37	RNA-binding KH domain-containing protein	[more]
AT5G15270.2	2.0e-19	24.70	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	2.0e-19	24.70	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 31..51
None	No IPR available	GENE3D	3.30.310.210		coord: 84..254 e-value: 4.9E-36 score: 125.9
None	No IPR available	PANTHER	PTHR10288:SF259	POLY(RC)-BINDING-LIKE PROTEIN	coord: 27..447
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 27..447
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 353..406 score: 11.00735
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 175..244 score: 15.640217
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 84..151 score: 14.15183
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 86..155 e-value: 2.15209E-18 score: 77.1315
None	No IPR available	CDD	cd00105	KH-I	coord: 355..409 e-value: 1.09208E-7 score: 46.7843
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 177..245 e-value: 1.52937E-19 score: 80.2131
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 352..422 e-value: 0.49 score: 18.3 coord: 174..249 e-value: 5.8E-14 score: 62.4 coord: 83..163 e-value: 2.6E-8 score: 43.6
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 341..415 e-value: 3.4E-9 score: 38.3
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 167..259
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 344..413
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 78..137
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 178..245 e-value: 3.4E-15 score: 55.6 coord: 87..137 e-value: 3.2E-12 score: 46.1 coord: 355..408 e-value: 1.2E-6 score: 28.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G004250.1	Lsi11G004250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding