Lsi11G003660 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G003660
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Temperature-induced lipocalin-1-like
Location	chr11: 3782175 .. 3783226 (-)
RNA-Seq Expression	Lsi11G003660
Synteny	Lsi11G003660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAACCCTCTGAGATCTATCTCAGAAGCTCATCATTCAACAACAATGGTGAAGAAAGAGATGGATGTCATGGAGGACGTCGACCTTAAGAGGTATATGGGTCGGTGGTATGAAATAGCCTCATTTCCATCTAGGTTTCAGCCCAAAAATGGAGCTAATACCAGAGCGACCTACACCCTGAGAGATGAACGGACGGTGAATGTCCTAAATGAGACCTGGGTTGATGGCAAGAGGAGTTTCATTGAAGGTACTGCTGTTAAAGCTAATCCTGATAGTGATGAAGCCAAGCTCAAAGTTAAATTCTATGTTCCTCCATTCATGCCTATCATTCCTGTTGTTGGAGATTACTGGGTTTTGTATCTTGATCATGATTATCACCATGCTTTGATTGGCCAGCCTAGCAGAAACTATCTATGGGTATGTCTGACATTGGTTTTCTTATGGGGAGTTTTGGATGTTTGTGAACTGTTTGTGATCGAGAGAAAAGGGTTTTGAGTTATGATAATGGGAGGTTTCTGAATTGTTATTTCATGGTGTTTCTTTGACAGATATTGTGCAGGCAGAATCATTTGGATGAGGAGATATATAATCAACTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTTCGCAGAACAACACACACTGACCCTCCACCAGAAGGAGATGAAGGTCCCAAAGATACTAAAGGAATATGGTGGATCAAATCAATCTTTGGAAAATGATTTAAGGTTTGAAGAAAAGTTAATTGAATTTTGTACCTTTGAGTTCAATGGGAATTGTTAAATTTCCCCACTTTGGTTTGTATCTAGTGAAGATTTTGTGCTTGGTTTTGTTCGAACGAATCCTTTGTGCTGTTTGTATACAGTCTTCCAGATATTGTATTTGCTGAATAATTTCTGATGAAACTGGGGTTTTGAGCTCTCAACATTTTACTTTTAGACTGCCAGATTCTGAAGTTTCCCAAACCTGTAAAAATGAAATTTGAGAAGAGATACAATTTATTTACAC

mRNA sequence

CCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAAACCCTCTGAGATCTATCTCAGAAGCTCATCATTCAACAACAATGGTGAAGAAAGAGATGGATGTCATGGAGGACGTCGACCTTAAGAGGTATATGGGTCGGTGGTATGAAATAGCCTCATTTCCATCTAGGTTTCAGCCCAAAAATGGAGCTAATACCAGAGCGACCTACACCCTGAGAGATGAACGGACGGTGAATGTCCTAAATGAGACCTGGGTTGATGGCAAGAGGAGTTTCATTGAAGGTACTGCTGTTAAAGCTAATCCTGATAGTGATGAAGCCAAGCTCAAAGTTAAATTCTATGTTCCTCCATTCATGCCTATCATTCCTGTTGTTGGAGATTACTGGGTTTTGTATCTTGATCATGATTATCACCATGCTTTGATTGGCCAGCCTAGCAGAAACTATCTATGGATATTGTGCAGGCAGAATCATTTGGATGAGGAGATATATAATCAACTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTTCGCAGAACAACACACACTGACCCTCCACCAGAAGGAGATGAAGGTCCCAAAGATACTAAAGGAATATGGTGGATCAAATCAATCTTTGGAAAATGATTTAAGGTTTGAAGAAAAGTTAATTGAATTTTGTACCTTTGAGTTCAATGGGAATTGTTAAATTTCCCCACTTTGGTTTGTATCTAGTGAAGATTTTGTGCTTGGTTTTGTTCGAACGAATCCTTTGTGCTGTTTGTATACAGTCTTCCAGATATTGTATTTGCTGAATAATTTCTGATGAAACTGGGGTTTTGAGCTCTCAACATTTTACTTTTAGACTGCCAGATTCTGAAGTTTCCCAAACCTGTAAAAATGAAATTTGAGAAGAGATACAATTTATTTACAC

Coding sequence (CDS)

ATGGTGAAGAAAGAGATGGATGTCATGGAGGACGTCGACCTTAAGAGGTATATGGGTCGGTGGTATGAAATAGCCTCATTTCCATCTAGGTTTCAGCCCAAAAATGGAGCTAATACCAGAGCGACCTACACCCTGAGAGATGAACGGACGGTGAATGTCCTAAATGAGACCTGGGTTGATGGCAAGAGGAGTTTCATTGAAGGTACTGCTGTTAAAGCTAATCCTGATAGTGATGAAGCCAAGCTCAAAGTTAAATTCTATGTTCCTCCATTCATGCCTATCATTCCTGTTGTTGGAGATTACTGGGTTTTGTATCTTGATCATGATTATCACCATGCTTTGATTGGCCAGCCTAGCAGAAACTATCTATGGATATTGTGCAGGCAGAATCATTTGGATGAGGAGATATATAATCAACTGGTGGAGAAAGCTAAGGAACAGGGTTATGATGTGAGCAAGCTTCGCAGAACAACACACACTGACCCTCCACCAGAAGGAGATGAAGGTCCCAAAGATACTAAAGGAATATGGTGGATCAAATCAATCTTTGGAAAATGA

Protein sequence

MVKKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGKRSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSIFGK

Homology

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BLAST of Lsi11G003660 vs. ExPASy Swiss-Prot
Match: Q9FGT8 (Temperature-induced lipocalin-1 OS=Arabidopsis thaliana OX=3702 GN=TIL PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.6e-76
Identity = 128/183 (69.95%), Postives = 156/183 (85.25%), Query Frame = 0


Query: 3   KKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           KKEM+V++ ++++RYMGRWYEIASFPSRFQPKNG +TRATYTL  + T++VLNETW +GK
Sbjct: 4   KKEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGK 63

Query: 63  RSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNY 122
           R FIEG+A KA+P SDEAKLKVKFYVPPF+PIIPV GDYWVLY+D DY HALIGQPSR+Y
Sbjct: 64  RGFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSY 123

Query: 123 LWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI 182
           LWIL R   ++EE Y QLVEKA E+GYD+SKL +T  +D PPE +  P+D+KG+WW KS+
Sbjct: 124 LWILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNTAPEDSKGVWWFKSL 183

Query: 183 FGK 186
           FGK
Sbjct: 184 FGK 186

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BLAST of Lsi11G003660 vs. ExPASy Swiss-Prot
Match: Q46036 (Outer membrane lipoprotein Blc OS=Citrobacter freundii OX=546 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.0e-20
Identity = 59/153 (38.56%), Postives = 88/153 (57.52%), Query Frame = 0


Query: 4   KEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGKR 63
           K + V+ + D KRY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ + +  R
Sbjct: 26  KGVTVVNNFDAKRYLGTWYEIARFDHRFE-RGLDKVTATYSLRDDGGINVINKGY-NPDR 85

Query: 64  SFIEGTAVKA--NPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRN 123
              + T  KA    D   A LKV F+ P +       G Y V+ LD +Y HAL+  P R+
Sbjct: 86  EMWQKTEGKAYFTGDPSTAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRD 145

Query: 124 YLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKL 155
           YLWIL R   + +E+  Q++  A  +G++V+KL
Sbjct: 146 YLWILSRTPTISDEMKQQMLAIATREGFEVNKL 169

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BLAST of Lsi11G003660 vs. ExPASy Swiss-Prot
Match: P0A902 (Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 OX=83334 GN=blc PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 57/148 (38.51%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 8   VMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD--GKRSF 67
           V+ + D KRY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ +    G    
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 89

Query: 68  IEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNYLWI 127
            EG A      +  A LKV F+ P +       G Y V+ LD +Y HAL+  P R+YLWI
Sbjct: 90  SEGKAYFTGAPT-RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 149

Query: 128 LCRQNHLDEEIYNQLVEKAKEQGYDVSK 154
           L R   + +E+  +++  A  +G+DVSK
Sbjct: 150 LSRTPTISDEVKQEMLAVATREGFDVSK 168

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BLAST of Lsi11G003660 vs. ExPASy Swiss-Prot
Match: P0A901 (Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) OX=83333 GN=blc PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 57/148 (38.51%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 8   VMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD--GKRSF 67
           V+ + D KRY+G WYEIA F  RF+ +      ATY+LRD+  +NV+N+ +    G    
Sbjct: 30  VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 89

Query: 68  IEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNYLWI 127
            EG A      +  A LKV F+ P +       G Y V+ LD +Y HAL+  P R+YLWI
Sbjct: 90  SEGKAYFTGAPT-RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 149

Query: 128 LCRQNHLDEEIYNQLVEKAKEQGYDVSK 154
           L R   + +E+  +++  A  +G+DVSK
Sbjct: 150 LSRTPTISDEVKQEMLAVATREGFDVSK 168

[Close]

BLAST of Lsi11G003660 vs. ExPASy Swiss-Prot
Match: Q5URA7 (Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R877 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.1e-16
Identity = 51/156 (32.69%), Postives = 84/156 (53.85%), Query Frame = 0


Query: 3   KKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           K+++     +D++RYMG WYEIA  P+ FQ K   N+ A Y L +   + V N   ++G+
Sbjct: 19  KRDVVSQSSLDIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPNKIQVTNNCEINGR 78

Query: 63  RSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVG--DYWVLYLDHDYHHALIGQPSR 122
            + + GTA+ A       ++   F  P  + +    G   Y V+++D +Y +A++     
Sbjct: 79  INSVTGTAIPA----ANTRIVSGFLTPASLMVNFGYGFSPYNVIFIDENYQYAIV-SGGN 138

Query: 123 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRR 157
           + LWIL R  ++++  YNQLV     QGYDV+ L R
Sbjct: 139 DTLWILSRFKNINQSTYNQLVTIVYNQGYDVNNLIR 168

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BLAST of Lsi11G003660 vs. ExPASy TrEMBL
Match: A0A0A0LL45 (Apolipoprotein d OS=Cucumis sativus OX=3659 GN=Csa_2G008710 PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 8.2e-105
Identity = 182/185 (98.38%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MVKKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           MVK EMDVM+DVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKR FIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]

BLAST of Lsi11G003660 vs. ExPASy TrEMBL
Match: A0A1S3C5X6 (temperature-induced lipocalin-1-like OS=Cucumis melo OX=3656 GN=LOC103497043 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 4.5e-103
Identity = 178/185 (96.22%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVKKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M KKEMDVM+ VDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMDVMKGVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKR FIEGTAVK NPDSDEAKLKVKFYVPPF+PIIPVVGDYWVLYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKDNPDSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKG+WWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGVWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]

BLAST of Lsi11G003660 vs. ExPASy TrEMBL
Match: A0A5A7V949 (Temperature-induced lipocalin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00440 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 4.5e-103
Identity = 178/185 (96.22%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVKKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M KKEMDVM+ VDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMDVMKGVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKR FIEGTAVK NPDSDEAKLKVKFYVPPF+PIIPVVGDYWVLYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKDNPDSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKG+WWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGVWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]

BLAST of Lsi11G003660 vs. ExPASy TrEMBL
Match: A0A6J1KJ97 (temperature-induced lipocalin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111493718 PE=3 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.0e-99
Identity = 171/185 (92.43%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MVKKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M KKEM+VM+DVDL+RYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           G+RSFIEGTA KANPDS+EAKLKVKFYVPPF+PIIP+VGDYW+LYLDHDYHHALIGQPSR
Sbjct: 61  GRRSFIEGTAFKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCR+NHLDEEIYN+LV+KAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRENHLDEEIYNELVKKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 184

[Close]

BLAST of Lsi11G003660 vs. ExPASy TrEMBL
Match: A0A6J1G309 (temperature-induced lipocalin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111450320 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98
Identity = 171/185 (92.43%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVKKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M KKEM+VM+DVDL+RYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           G+RSFIEGTAVKANPDS+EAKLKVKFYVPPF+PIIP+VGDYW+LYLD DYHHALIGQPSR
Sbjct: 61  GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDRDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCR+NHLDEE YN+LVEKAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 184

[Close]

BLAST of Lsi11G003660 vs. NCBI nr
Match: XP_038890101.1 (temperature-induced lipocalin-1-like [Benincasa hispida])

HSP 1 Score: 389.8 bits (1000), Expect = 1.3e-104
Identity = 181/185 (97.84%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MVKKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           MV+KEMDVM+DVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MVQKEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKR FIEGTAVKANPDSDEAKLKVKFYVPPFMP+IPVVGDYWVLYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPVIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]

BLAST of Lsi11G003660 vs. NCBI nr
Match: XP_004139285.1 (temperature-induced lipocalin-1 [Cucumis sativus] >KGN60731.1 hypothetical protein Csa_019524 [Cucumis sativus])

HSP 1 Score: 389.4 bits (999), Expect = 1.7e-104
Identity = 182/185 (98.38%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MVKKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           MVK EMDVM+DVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MVKTEMDVMKDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKR FIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]

BLAST of Lsi11G003660 vs. NCBI nr
Match: XP_008457325.1 (PREDICTED: temperature-induced lipocalin-1-like [Cucumis melo] >XP_008457334.1 PREDICTED: temperature-induced lipocalin-1-like [Cucumis melo] >KAA0063507.1 temperature-induced lipocalin-1-like [Cucumis melo var. makuwa] >TYJ97834.1 temperature-induced lipocalin-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 383.6 bits (984), Expect = 9.3e-103
Identity = 178/185 (96.22%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVKKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M KKEMDVM+ VDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMDVMKGVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           GKR FIEGTAVK NPDSDEAKLKVKFYVPPF+PIIPVVGDYWVLYLDHDYHHALIGQPSR
Sbjct: 61  GKRGFIEGTAVKDNPDSDEAKLKVKFYVPPFLPIIPVVGDYWVLYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKG+WWIK
Sbjct: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGVWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 185

[Close]

BLAST of Lsi11G003660 vs. NCBI nr
Match: KAG6599439.1 (Temperature-induced lipocalin-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372.1 bits (954), Expect = 2.8e-99
Identity = 172/185 (92.97%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MVKKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M KKEM+VM+DVDL+RYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 1   MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60

Query: 61  GKRSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           G+RSFIEGTAVKANPDS+EAKLKVKFYVPPF+PIIP+VGDYW+LYLDHDYHHALIGQPSR
Sbjct: 61  GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 120

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCR+NHLDEE YN+LVEKAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKGIWWIK
Sbjct: 121 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 180

Query: 181 SIFGK 186
           SIFGK
Sbjct: 181 SIFGK 184

[Close]

BLAST of Lsi11G003660 vs. NCBI nr
Match: KAG7030354.1 (Temperature-induced lipocalin-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 372.1 bits (954), Expect = 2.8e-99
Identity = 172/185 (92.97%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MVKKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 60
           M KKEM+VM+DVDL+RYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD
Sbjct: 71  MAKKEMEVMKDVDLERYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVD 130

Query: 61  GKRSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSR 120
           G+RSFIEGTAVKANPDS+EAKLKVKFYVPPF+PIIP+VGDYW+LYLDHDYHHALIGQPSR
Sbjct: 131 GRRSFIEGTAVKANPDSNEAKLKVKFYVPPFLPIIPIVGDYWILYLDHDYHHALIGQPSR 190

Query: 121 NYLWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIK 180
           NYLWILCR+NHLDEE YN+LVEKAKEQGYDVSKLRRTTHTD PPEGDEGPKDTKGIWWIK
Sbjct: 191 NYLWILCRENHLDEETYNELVEKAKEQGYDVSKLRRTTHTD-PPEGDEGPKDTKGIWWIK 250

Query: 181 SIFGK 186
           SIFGK
Sbjct: 251 SIFGK 254

[Close]

BLAST of Lsi11G003660 vs. TAIR 10
Match: AT5G58070.1 (temperature-induced lipocalin )

HSP 1 Score: 287.0 bits (733), Expect = 1.1e-77
Identity = 128/183 (69.95%), Postives = 156/183 (85.25%), Query Frame = 0


Query: 3   KKEMDVMEDVDLKRYMGRWYEIASFPSRFQPKNGANTRATYTLRDERTVNVLNETWVDGK 62
           KKEM+V++ ++++RYMGRWYEIASFPSRFQPKNG +TRATYTL  + T++VLNETW +GK
Sbjct: 4   KKEMEVVKGLNVERYMGRWYEIASFPSRFQPKNGVDTRATYTLNPDGTIHVLNETWSNGK 63

Query: 63  RSFIEGTAVKANPDSDEAKLKVKFYVPPFMPIIPVVGDYWVLYLDHDYHHALIGQPSRNY 122
           R FIEG+A KA+P SDEAKLKVKFYVPPF+PIIPV GDYWVLY+D DY HALIGQPSR+Y
Sbjct: 64  RGFIEGSAYKADPKSDEAKLKVKFYVPPFLPIIPVTGDYWVLYIDPDYQHALIGQPSRSY 123

Query: 123 LWILCRQNHLDEEIYNQLVEKAKEQGYDVSKLRRTTHTDPPPEGDEGPKDTKGIWWIKSI 182
           LWIL R   ++EE Y QLVEKA E+GYD+SKL +T  +D PPE +  P+D+KG+WW KS+
Sbjct: 124 LWILSRTAQMEEETYKQLVEKAVEEGYDISKLHKTPQSDTPPESNTAPEDSKGVWWFKSL 183

Query: 183 FGK 186
           FGK
Sbjct: 184 FGK 186

The following BLAST results are available for this feature:

BLAST of Lsi11G003660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGT8	1.6e-76	69.95	Temperature-induced lipocalin-1 OS=Arabidopsis thaliana OX=3702 GN=TIL PE=1 SV=1	[more]
Q46036	6.0e-20	38.56	Outer membrane lipoprotein Blc OS=Citrobacter freundii OX=546 PE=3 SV=1	[more]
P0A902	1.1e-18	38.51	Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 OX=83334 GN=blc PE=3 ...	[more]
P0A901	1.1e-18	38.51	Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) OX=83333 GN=blc ...	[more]
Q5URA7	3.1e-16	32.69	Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R8...	[more]

BLAST of Lsi11G003660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL45	8.2e-105	98.38	Apolipoprotein d OS=Cucumis sativus OX=3659 GN=Csa_2G008710 PE=3 SV=1	[more]
A0A1S3C5X6	4.5e-103	96.22	temperature-induced lipocalin-1-like OS=Cucumis melo OX=3656 GN=LOC103497043 PE=...	[more]
A0A5A7V949	4.5e-103	96.22	Temperature-induced lipocalin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1KJ97	4.0e-99	92.43	temperature-induced lipocalin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111493718...	[more]
A0A6J1G309	1.2e-98	92.43	temperature-induced lipocalin-1-like OS=Cucurbita moschata OX=3662 GN=LOC1114503...	[more]

BLAST of Lsi11G003660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890101.1	1.3e-104	97.84	temperature-induced lipocalin-1-like [Benincasa hispida]	[more]
XP_004139285.1	1.7e-104	98.38	temperature-induced lipocalin-1 [Cucumis sativus] >KGN60731.1 hypothetical prote...	[more]
XP_008457325.1	9.3e-103	96.22	PREDICTED: temperature-induced lipocalin-1-like [Cucumis melo] >XP_008457334.1 P...	[more]
KAG6599439.1	2.8e-99	92.97	Temperature-induced lipocalin-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7030354.1	2.8e-99	92.97	Temperature-induced lipocalin-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lsi11G003660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58070.1	1.1e-77	69.95	temperature-induced lipocalin	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002446	Lipocalin, bacterial	PRINTS	PR01171	BCTLIPOCALIN	coord: 148..158 score: 38.66 coord: 121..132 score: 48.99 coord: 106..114 score: 54.09 coord: 12..26 score: 60.55
IPR022271	Lipocalin, ApoD type	PIRSF	PIRSF036893	Lipocalin_ApoD	coord: 1..170 e-value: 2.7E-52 score: 175.0
IPR000566	Lipocalin/cytosolic fatty-acid binding domain	PFAM	PF08212	Lipocalin_2	coord: 12..158 e-value: 1.2E-52 score: 177.8
IPR012674	Calycin	GENE3D	2.40.128.20		coord: 1..163 e-value: 1.8E-49 score: 169.7
IPR012674	Calycin	SUPERFAMILY	50814	Lipocalins	coord: 5..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..173
None	No IPR available	PANTHER	PTHR10612	APOLIPOPROTEIN D	coord: 1..185
None	No IPR available	PANTHER	PTHR10612:SF47	LIPOCALIN-RELATED	coord: 1..185
None	No IPR available	CDD	cd19438	lipocalin_Blc-like	coord: 10..157 e-value: 3.88759E-62 score: 187.385
IPR022272	Lipocalin family conserved site	PROSITE	PS00213	LIPOCALIN	coord: 11..24

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G003660.1	Lsi11G003660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:0000302	response to reactive oxygen species
cellular_component	GO:0005737	cytoplasm