Lsi11G003510 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G003510
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	EamA domain-containing protein
Location	chr11: 3698289 .. 3699893 (+)
RNA-Seq Expression	Lsi11G003510
Synteny	Lsi11G003510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTAAGTAAAATGTCAAAAAAAAAATTTAATTTTCGTCAAATCTCATTTGGACTTCCAAAAATAGGTCGATCTCTAGTTGATTTGACTTGACTAACCAATTTTTTTTTTTTTTTTATTTAATTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTTATTTAATTTTTTTTTTTGTGGGGGGACAGAAATCAGAAGCATTCTTTAGTTGGTGATGCATTTGCTTTGCTCTCAGCCGTGACAGATGGTCTCTACTATGGTTAGAAATATATGAAGCTCTTTCTATCTTTGTTGTTTTCTTCAAACAAACAAAAAAAAAGGGCTATTTCTTAAATTGTGTATTGGATTTTTGTCAAATTTGCAGTGCTGTTAGAGAGGTATGCTGGAGAAAATGGACAAAAGTTGGACCTTCAGAAGTTCCTTGGCTTTGTTGGATTGTTTGTTTTCTCTGGCTTATGGTGGTTAGGTGAGCAAACTTTGCTTTCTTTAAAAACCGTTTTCTGTTGATTAGTTGATTCTTTTATCAACCTAAGAGGTCAAAAGTTTGAATTCCCCACTCTACATGTTACAGAACTCGTAAAAATATATATTTGTTTTCAAATTTATGAAATAAGTTCATTGAATTTCTATTTGAATTCCAACTCAATATTACTTACATGTTACACAATCACAAATACACGATCAAAGATCAATGAACACGATCAAATGGCATCGATTTTGCCTTTTTACCTAACCGTAGAGCCAAAATTGGACGAATCGGACATTTATAAATCATCAAATGCATTTTATGATGGCTATTTTTTGTGCTTTTGCAGTATGGCCTTTGGCAGCAATAGGCATTGAACCCAAGTTTGCACTTCCTACATCAGCCAAAGTGGTGGAAATCATTGTTGCCAATTGCTTCCTTGGAAATTTTGTTGCTGATTACTTCTGGTATGTTATAGAGAGACAGAGATTAGCAATCTTCAAGAAGTGAAGCTTTAAATTGATTTAACATTTGGTTGCATTTTTATAGTGCATTGGGAGCCATTTGGACAAGCCCTTTGGTGGCTACATTAGCTTCCTCACTAACCATTCCATTAGCCATGTTGATGGATATGGTCATCCATGGCCGTCATTATTCTCCACTTTACATTCTTGGATCAATTCAGGTAAGACATCAATTATCATCTACTTTAGAATTACATCGCTCGTCTAATCTGATCTACCAAAGAAACCCTTTTTTTCCCTTCTGCTAAAACACGGACATTGTCATTATTGGATCATATAAAAAGGGGTTGAGTCTTTTTTCGACTCGATCTGTACACTTTGATTTCAAATGTTGTAATATTCTCTCTTTGTTTTTTTTCAGGTTTTTGTAGGGTTCATAGTTGCCAACCTCTCAGATTGGCTGACACCAAAGTTGAGATTGATATTCAGCAAAGCTCAGAAGTAATTTAAACGGAGGTCTCAACAAGAGTTTTGAACGTTACACAAAAGTTTACAGAGAGGCTTCTGCTCAGAAACTCTTTTCTTCAGCCAACAGCAATTTTTGACTTTTAACTGAACATTTTTGCAACATATGTCAATAGAATCAGACTAAAAATGTCATAAACTTTCACGAATT

mRNA sequence

ATGATAAATCAGAAGCATTCTTTAGTTGGTGATGCATTTGCTTTGCTCTCAGCCGTGACAGATGGTCTCTACTATGTATGGCCTTTGGCAGCAATAGGCATTGAACCCAAGTTTGCACTTCCTACATCAGCCAAAGTGGTGGAAATCATTGTTGCCAATTGCTTCCTTGGAAATTTTGTTGCTGATTACTTCTGGTATGTTATAGAGAGACAGAGATTAGCAATCTTCAAGAATGCATTGGGAGCCATTTGGACAAGCCCTTTGGTGGCTACATTAGCTTCCTCACTAACCATTCCATTAGCCATGTTGATGGATATGGTCATCCATGGCCGTCATTATTCTCCACTTTACATTCTTGGATCAATTCAGGTTTTTGTAGGGTTCATAGTTGCCAACCTCTCAGATTGGCTGACACCAAAGTTGAGATTGATATTCAGCAAAGCTCAGAAGTAATTTAAACGGAGGTCTCAACAAGAGTTTTGAACGTTACACAAAAGTTTACAGAGAGGCTTCTGCTCAGAAACTCTTTTCTTCAGCCAACAGCAATTTTTGACTTTTAACTGAACATTTTTGCAACATATGTCAATAGAATCAGACTAAAAATGTCATAAACTTTCACGAATT

Coding sequence (CDS)

ATGATAAATCAGAAGCATTCTTTAGTTGGTGATGCATTTGCTTTGCTCTCAGCCGTGACAGATGGTCTCTACTATGTATGGCCTTTGGCAGCAATAGGCATTGAACCCAAGTTTGCACTTCCTACATCAGCCAAAGTGGTGGAAATCATTGTTGCCAATTGCTTCCTTGGAAATTTTGTTGCTGATTACTTCTGGTATGTTATAGAGAGACAGAGATTAGCAATCTTCAAGAATGCATTGGGAGCCATTTGGACAAGCCCTTTGGTGGCTACATTAGCTTCCTCACTAACCATTCCATTAGCCATGTTGATGGATATGGTCATCCATGGCCGTCATTATTCTCCACTTTACATTCTTGGATCAATTCAGGTTTTTGTAGGGTTCATAGTTGCCAACCTCTCAGATTGGCTGACACCAAAGTTGAGATTGATATTCAGCAAAGCTCAGAAGTAA

Protein sequence

MINQKHSLVGDAFALLSAVTDGLYYVWPLAAIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKNALGAIWTSPLVATLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANLSDWLTPKLRLIFSKAQK

Homology

[Close]

BLAST of Lsi11G003510 vs. ExPASy Swiss-Prot
Match: O94654 (Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC405.03c PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.6e-09
Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 23  LYYVWPLAAI----GIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKN 82
           L  +WP   I    G+E +F+LP++   + +++ N  +  FV+DY W             
Sbjct: 236 LILLWPFLIILHLYGVE-RFSLPSTTAGLIVLIINASI-TFVSDYLW------------- 295

Query: 83  ALGAIWTSPLVATLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVAN 133
            +  + TSPL+ T+  SL+IPLA+  D+++ G + +   ILGS+ VF GFIV N
Sbjct: 296 VIAMLMTSPLLVTVGMSLSIPLALFFDILLKGHYLNFSLILGSLLVFAGFIVVN 334

[Close]

BLAST of Lsi11G003510 vs. ExPASy Swiss-Prot
Match: Q03730 (Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YML018C PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-08
Identity = 42/116 (36.21%), Postives = 58/116 (50.00%), Query Frame = 0


Query: 23  LYYVWP----LAAIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKN 82
           L ++WP    L   G EP F+LP   KVV II  NC +  FV+D+ W             
Sbjct: 268 LLFLWPSLIVLDFFGWEP-FSLPKDPKVVVIIFVNCLI-TFVSDFCW------------- 327

Query: 83  ALGAIWTSPLVATLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANLS 135
           A   + TSPL  T+  S+TIPLAM  D++   +  S LY+ G+  +   F + N S
Sbjct: 328 AKAMLLTSPLTVTVGLSITIPLAMFGDVIFKHKTMSALYLFGATLILGSFFIINKS 368

[Close]

BLAST of Lsi11G003510 vs. ExPASy Swiss-Prot
Match: Q04083 (Thiamine-repressible mitochondrial transport protein THI74 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=THI74 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08
Identity = 36/95 (37.89%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 38  FALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKNALGAIWTSPLVATLASSLT 97
           F LP++  +  +++ NC +  FV+DYFW                 I TSPLV T+A + T
Sbjct: 268 FELPSNFHISFLVMLNCII-IFVSDYFW-------------CKALILTSPLVVTVALTFT 327

Query: 98  IPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVAN 133
           IPLAM  D V     ++P YI+G I +FV F + N
Sbjct: 328 IPLAMFADFVWREAFFTPWYIIGVIFIFVSFFLVN 348

[Close]

BLAST of Lsi11G003510 vs. ExPASy Swiss-Prot
Match: A6QL92 (Solute carrier family 35 member F5 OS=Bos taurus OX=9913 GN=SLC35F5 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 9.9e-05
Identity = 38/115 (33.04%), Postives = 54/115 (46.96%), Query Frame = 0


Query: 23  LYYVWP----LAAIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKN 82
           L  +WP    L   G E  F  P    V+  IV N  +G  ++++ W             
Sbjct: 372 LLLLWPGFFLLHYTGFE-DFEFPNKV-VLMCIVINGLIGTVLSEFLW------------- 431

Query: 83  ALGAIWTSPLVATLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANL 134
             G   TS L+ TLA SLTIPL+++ DM +    +S L+  G+I VF  F +A L
Sbjct: 432 LWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIATL 471

[Close]

BLAST of Lsi11G003510 vs. ExPASy Swiss-Prot
Match: Q8WV83 (Solute carrier family 35 member F5 OS=Homo sapiens OX=9606 GN=SLC35F5 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.8e-04
Identity = 36/115 (31.30%), Postives = 53/115 (46.09%), Query Frame = 0


Query: 23  LYYVWP----LAAIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKN 82
           L  +WP    L   G E  F  P    V+  I+ N  +G  ++++ W             
Sbjct: 371 LLLLWPGFFLLHYTGFE-DFEFPNKV-VLMCIIINGLIGTVLSEFLW------------- 430

Query: 83  ALGAIWTSPLVATLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANL 134
             G   TS L+ TLA SLTIPL+++ DM +    +S L+  G+I VF  F +  L
Sbjct: 431 LWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTL 470

[Close]

BLAST of Lsi11G003510 vs. ExPASy TrEMBL
Match: A0A6J1C0M9 (uncharacterized transporter C405.03c-like OS=Momordica charantia OX=3673 GN=LOC111006993 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 3.3e-43
Identity = 95/173 (54.91%), Postives = 115/173 (66.47%), Query Frame = 0


Query: 5   KHSLVGDAFALLSAVTDGLYYV----------------------------------WPLA 64
           KHS VGDAFALLSA+TDGLYYV                                  WPL 
Sbjct: 245 KHSFVGDAFALLSALTDGLYYVLLKKYAGEEGEKIDMQKFLGYVGLFTLTTLWWLIWPLR 304

Query: 65  AIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKNALGAIWTSPLVA 124
           AIGIEPKFA+P S KV E+++ANCF+GNF++DYFW             A+G +WTSPLVA
Sbjct: 305 AIGIEPKFAIPRSTKVAELVLANCFIGNFLSDYFW-------------AMGVVWTSPLVA 364

Query: 125 TLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANLSDWLTPKLRL 144
            L +SLTIPLAML DMV+HGRHYS +YI GS+QVF+GF++ANLSDW++PKL+L
Sbjct: 365 ALGASLTIPLAMLGDMVLHGRHYSLVYIFGSLQVFLGFMIANLSDWISPKLKL 404

[Close]

BLAST of Lsi11G003510 vs. ExPASy TrEMBL
Match: A0A0A0LWA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G220860 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 5.6e-43
Identity = 96/173 (55.49%), Postives = 114/173 (65.90%), Query Frame = 0


Query: 5   KHSLVGDAFALLSAVTDGLYYV----------------------------------WPLA 64
           KHS VGDAFALLSA+TDGLYYV                                  WPL 
Sbjct: 87  KHSFVGDAFALLSALTDGLYYVLLKRYAGEEAEKVDMQKFLGYVGLFTLTTLWWLFWPLR 146

Query: 65  AIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKNALGAIWTSPLVA 124
           AIGIEPKF +P S KVVE+++ANCF+ NFV+DYFW             A+G +WTSPLVA
Sbjct: 147 AIGIEPKFMIPQSTKVVEVVLANCFVANFVSDYFW-------------AMGVVWTSPLVA 206

Query: 125 TLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANLSDWLTPKLRL 144
            L +SLTIPLAM+ DMV+HGRHYS +YI GSIQVF+GFI+ANLSDW++PKL+L
Sbjct: 207 ALGASLTIPLAMVGDMVLHGRHYSLVYIFGSIQVFLGFIIANLSDWISPKLKL 246

[Close]

BLAST of Lsi11G003510 vs. ExPASy TrEMBL
Match: A0A5D3C4N7 (Putative transporter-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00180 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.6e-42
Identity = 94/173 (54.34%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 5   KHSLVGDAFALLSAVTDGLYYV----------------------------------WPLA 64
           KHS VGDAFALLSA+TDGLYYV                                  WPL 
Sbjct: 250 KHSFVGDAFALLSALTDGLYYVLLKKYAGEEGEKVDMQKFLGYVGLFTLTTLWWLIWPLR 309

Query: 65  AIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKNALGAIWTSPLVA 124
           AIGIEPKF +P S KV E+++ANCF+ NFV+DYFW             A+G +WTSPLVA
Sbjct: 310 AIGIEPKFMIPQSTKVAEVVLANCFVANFVSDYFW-------------AMGVVWTSPLVA 369

Query: 125 TLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANLSDWLTPKLRL 144
            L +SLTIPLAM+ DMV+HGRHYS +YI GSIQVF+GFI+AN SDW++PKL+L
Sbjct: 370 ALGASLTIPLAMIGDMVLHGRHYSLVYIFGSIQVFLGFIIANFSDWISPKLKL 409

[Close]

BLAST of Lsi11G003510 vs. ExPASy TrEMBL
Match: A0A5A7U493 (Putative transporter-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00790 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.3e-41
Identity = 93/173 (53.76%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 5   KHSLVGDAFALLSAVTDGLYYV----------------------------------WPLA 64
           KHS VGDAFALLSA+TDGLYYV                                  WPL 
Sbjct: 250 KHSFVGDAFALLSALTDGLYYVLLKKYAGEEGEKVDMQKFLGYVGLFTLTTLWWLIWPLR 309

Query: 65  AIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKNALGAIWTSPLVA 124
           AIGIEPKF +P S KV E+++ANCF+ NFV+DYFW             A+G +WTSPLVA
Sbjct: 310 AIGIEPKFMIPQSTKVAEVVLANCFVANFVSDYFW-------------AMGVVWTSPLVA 369

Query: 125 TLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANLSDWLTPKLRL 144
            L +SLTIPLAM+ DMV+H RHYS +YI GSIQVF+GFI+AN SDW++PKL+L
Sbjct: 370 ALGASLTIPLAMIGDMVLHDRHYSLVYIFGSIQVFLGFIIANFSDWISPKLKL 409

[Close]

BLAST of Lsi11G003510 vs. ExPASy TrEMBL
Match: A0A1S3B9F8 (uncharacterized transporter C405.03c-like OS=Cucumis melo OX=3656 GN=LOC103487495 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.5e-40
Identity = 92/173 (53.18%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 5   KHSLVGDAFALLSAVTDGLYYV----------------------------------WPLA 64
           KHS VGDAFALLSA+TDGLYYV                                  WPL 
Sbjct: 185 KHSFVGDAFALLSALTDGLYYVLLKKYAGEEGEKVDMQKFLGYVGLFTLTTLWWLIWPLR 244

Query: 65  AIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKNALGAIWTSPLVA 124
           AIGIEPKF +P S KV E+++ANCF+ NFV+DYFW             A+G +WTSPLVA
Sbjct: 245 AIGIEPKFMIPQSTKVAEVVLANCFVANFVSDYFW-------------AMGVVWTSPLVA 304

Query: 125 TLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANLSDWLTPKLRL 144
            L +SL+IPLAM+ DMV+HGRHYS +YI GSIQVF+GFI+AN SDW++ KL+L
Sbjct: 305 ALGASLSIPLAMIGDMVLHGRHYSLVYIFGSIQVFLGFIIANFSDWISLKLKL 344

[Close]

BLAST of Lsi11G003510 vs. NCBI nr
Match: XP_022134812.1 (uncharacterized transporter C405.03c-like [Momordica charantia])

HSP 1 Score: 184.5 bits (467), Expect = 6.7e-43
Identity = 95/173 (54.91%), Postives = 115/173 (66.47%), Query Frame = 0


Query: 5   KHSLVGDAFALLSAVTDGLYYV----------------------------------WPLA 64
           KHS VGDAFALLSA+TDGLYYV                                  WPL 
Sbjct: 245 KHSFVGDAFALLSALTDGLYYVLLKKYAGEEGEKIDMQKFLGYVGLFTLTTLWWLIWPLR 304

Query: 65  AIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKNALGAIWTSPLVA 124
           AIGIEPKFA+P S KV E+++ANCF+GNF++DYFW             A+G +WTSPLVA
Sbjct: 305 AIGIEPKFAIPRSTKVAELVLANCFIGNFLSDYFW-------------AMGVVWTSPLVA 364

Query: 125 TLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANLSDWLTPKLRL 144
            L +SLTIPLAML DMV+HGRHYS +YI GS+QVF+GF++ANLSDW++PKL+L
Sbjct: 365 ALGASLTIPLAMLGDMVLHGRHYSLVYIFGSLQVFLGFMIANLSDWISPKLKL 404

[Close]

BLAST of Lsi11G003510 vs. NCBI nr
Match: XP_011648470.2 (uncharacterized transporter C405.03c [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-42
Identity = 96/173 (55.49%), Postives = 114/173 (65.90%), Query Frame = 0


Query: 5   KHSLVGDAFALLSAVTDGLYYV----------------------------------WPLA 64
           KHS VGDAFALLSA+TDGLYYV                                  WPL 
Sbjct: 169 KHSFVGDAFALLSALTDGLYYVLLKRYAGEEAEKVDMQKFLGYVGLFTLTTLWWLFWPLR 228

Query: 65  AIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKNALGAIWTSPLVA 124
           AIGIEPKF +P S KVVE+++ANCF+ NFV+DYFW             A+G +WTSPLVA
Sbjct: 229 AIGIEPKFMIPQSTKVVEVVLANCFVANFVSDYFW-------------AMGVVWTSPLVA 288

Query: 125 TLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANLSDWLTPKLRL 144
            L +SLTIPLAM+ DMV+HGRHYS +YI GSIQVF+GFI+ANLSDW++PKL+L
Sbjct: 289 ALGASLTIPLAMVGDMVLHGRHYSLVYIFGSIQVFLGFIIANLSDWISPKLKL 328

[Close]

BLAST of Lsi11G003510 vs. NCBI nr
Match: TYK06345.1 (putative transporter-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 181.0 bits (458), Expect = 7.5e-42
Identity = 94/173 (54.34%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 5   KHSLVGDAFALLSAVTDGLYYV----------------------------------WPLA 64
           KHS VGDAFALLSA+TDGLYYV                                  WPL 
Sbjct: 250 KHSFVGDAFALLSALTDGLYYVLLKKYAGEEGEKVDMQKFLGYVGLFTLTTLWWLIWPLR 309

Query: 65  AIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKNALGAIWTSPLVA 124
           AIGIEPKF +P S KV E+++ANCF+ NFV+DYFW             A+G +WTSPLVA
Sbjct: 310 AIGIEPKFMIPQSTKVAEVVLANCFVANFVSDYFW-------------AMGVVWTSPLVA 369

Query: 125 TLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANLSDWLTPKLRL 144
            L +SLTIPLAM+ DMV+HGRHYS +YI GSIQVF+GFI+AN SDW++PKL+L
Sbjct: 370 ALGASLTIPLAMIGDMVLHGRHYSLVYIFGSIQVFLGFIIANFSDWISPKLKL 409

[Close]

BLAST of Lsi11G003510 vs. NCBI nr
Match: XP_038880237.1 (uncharacterized vacuolar membrane protein YML018C-like [Benincasa hispida])

HSP 1 Score: 179.5 bits (454), Expect = 2.2e-41
Identity = 93/173 (53.76%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 5   KHSLVGDAFALLSAVTDGLYYV----------------------------------WPLA 64
           KHS VGD FALLSA+TDGLYYV                                  WPL 
Sbjct: 256 KHSYVGDIFALLSALTDGLYYVLLKKYAGEEGEKVDMQKFLGYVGLFTLTTLWWLIWPLR 315

Query: 65  AIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKNALGAIWTSPLVA 124
           AIGIEPKF +P S KV E+++ANCF+ NFV+DYFW             A+G +WTSPLVA
Sbjct: 316 AIGIEPKFMIPQSTKVAELVLANCFVSNFVSDYFW-------------AMGVVWTSPLVA 375

Query: 125 TLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANLSDWLTPKLRL 144
            L +SLTIPLAML DMV+HGRHYS +YI GS+QVF+GF++ANLSDW++PKL+L
Sbjct: 376 ALGASLTIPLAMLGDMVLHGRHYSLIYIFGSVQVFLGFMIANLSDWISPKLKL 415

[Close]

BLAST of Lsi11G003510 vs. NCBI nr
Match: KAA0050088.1 (putative transporter-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 178.3 bits (451), Expect = 4.8e-41
Identity = 93/173 (53.76%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 5   KHSLVGDAFALLSAVTDGLYYV----------------------------------WPLA 64
           KHS VGDAFALLSA+TDGLYYV                                  WPL 
Sbjct: 250 KHSFVGDAFALLSALTDGLYYVLLKKYAGEEGEKVDMQKFLGYVGLFTLTTLWWLIWPLR 309

Query: 65  AIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKNALGAIWTSPLVA 124
           AIGIEPKF +P S KV E+++ANCF+ NFV+DYFW             A+G +WTSPLVA
Sbjct: 310 AIGIEPKFMIPQSTKVAEVVLANCFVANFVSDYFW-------------AMGVVWTSPLVA 369

Query: 125 TLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANLSDWLTPKLRL 144
            L +SLTIPLAM+ DMV+H RHYS +YI GSIQVF+GFI+AN SDW++PKL+L
Sbjct: 370 ALGASLTIPLAMIGDMVLHDRHYSLVYIFGSIQVFLGFIIANFSDWISPKLKL 409

[Close]

BLAST of Lsi11G003510 vs. TAIR 10
Match: AT4G32140.1 (EamA-like transporter family )

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-35
Identity = 81/176 (46.02%), Postives = 104/176 (59.09%), Query Frame = 0


Query: 2   INQKHSLVGDAFALLSAVTDGLY----------------------------------YVW 61
           +N + SL+GD F LLSAV+ GL+                                   VW
Sbjct: 232 LNGERSLMGDLFGLLSAVSYGLFTVLLKKFAGEEGEGVDVQKLFGYIGLFTLVALWWLVW 291

Query: 62  PLAAIGIEPKFALPTSAKVVEIIVANCFLGNFVADYFWYVIERQRLAIFKNALGAIWTSP 121
           PL A+GIEPKF +P S KV E+++AN F+G+ ++DYFW             AL  +WT+P
Sbjct: 292 PLTALGIEPKFTIPHSVKVDEVVLANGFIGSVLSDYFW-------------ALSVVWTTP 351

Query: 122 LVATLASSLTIPLAMLMDMVIHGRHYSPLYILGSIQVFVGFIVANLSDWLTPKLRL 144
           LVATL  SLTIPLAM+ DM+IHGRHYS +YILGS QVF GF++AN+SD  + KL L
Sbjct: 352 LVATLGMSLTIPLAMVADMMIHGRHYSAIYILGSTQVFAGFVIANISDLFSKKLGL 394

The following BLAST results are available for this feature:

BLAST of Lsi11G003510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O94654	6.6e-09	34.21	Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ...	[more]
Q03730	2.5e-08	36.21	Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (s...	[more]
Q04083	3.3e-08	37.89	Thiamine-repressible mitochondrial transport protein THI74 OS=Saccharomyces cere...	[more]
A6QL92	9.9e-05	33.04	Solute carrier family 35 member F5 OS=Bos taurus OX=9913 GN=SLC35F5 PE=2 SV=1	[more]
Q8WV83	3.8e-04	31.30	Solute carrier family 35 member F5 OS=Homo sapiens OX=9606 GN=SLC35F5 PE=1 SV=1	[more]

BLAST of Lsi11G003510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0M9	3.3e-43	54.91	uncharacterized transporter C405.03c-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0LWA1	5.6e-43	55.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G220860 PE=4 SV=1	[more]
A0A5D3C4N7	3.6e-42	54.34	Putative transporter-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7U493	2.3e-41	53.76	Putative transporter-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A1S3B9F8	1.5e-40	53.18	uncharacterized transporter C405.03c-like OS=Cucumis melo OX=3656 GN=LOC10348749...	[more]

BLAST of Lsi11G003510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134812.1	6.7e-43	54.91	uncharacterized transporter C405.03c-like [Momordica charantia]	[more]
XP_011648470.2	1.1e-42	55.49	uncharacterized transporter C405.03c [Cucumis sativus]	[more]
TYK06345.1	7.5e-42	54.34	putative transporter-like protein [Cucumis melo var. makuwa]	[more]
XP_038880237.1	2.2e-41	53.76	uncharacterized vacuolar membrane protein YML018C-like [Benincasa hispida]	[more]
KAA0050088.1	4.8e-41	53.76	putative transporter-like protein [Cucumis melo var. makuwa]	[more]

BLAST of Lsi11G003510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32140.1	1.1e-35	46.02	EamA-like transporter family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23051:SF10	THIAMINE-REPRESSIBLE MITOCHONDRIAL TRANSPORT PROTEIN THI74-LIKE ISOFORM X1	coord: 24..143
None	No IPR available	PANTHER	PTHR23051	SOLUTE CARRIER FAMILY 35, MEMBER F5	coord: 24..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G003510.1	Lsi11G003510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane