Lsi11G003250 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G003250
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	calmodulin-like
Location	chr11: 3351372 .. 3351635 (-)
RNA-Seq Expression	Lsi11G003250
Synteny	Lsi11G003250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACGTGCATCAAGCAAGTTAAAGTTCTCTAGGGAGGATGTGAAGGAGATTTTCAGAGAACACGACATCGACGGAGATGGTCGATTGAGCATAAGCGAGTTGGTGAAGGCCTTCGGGTTCTTAGGCAGCATTCTTCCTTTCTACAAAGCTCACTACGGAATGGCTCATGCTGATGCTGATGACGATGGCTACATTGATGAGGACGAGCTCGACAAGCTCGTTGAGTATGCCGAGAAATTTCAGCACAAGAGGCACTGTTGA

mRNA sequence

ATGTCACGTGCATCAAGCAAGTTAAAGTTCTCTAGGGAGGATGTGAAGGAGATTTTCAGAGAACACGACATCGACGGAGATGGTCGATTGAGCATAAGCGAGTTGGTGAAGGCCTTCGGGTTCTTAGGCAGCATTCTTCCTTTCTACAAAGCTCACTACGGAATGGCTCATGCTGATGCTGATGACGATGGCTACATTGATGAGGACGAGCTCGACAAGCTCGTTGAGTATGCCGAGAAATTTCAGCACAAGAGGCACTGTTGA

Coding sequence (CDS)

ATGTCACGTGCATCAAGCAAGTTAAAGTTCTCTAGGGAGGATGTGAAGGAGATTTTCAGAGAACACGACATCGACGGAGATGGTCGATTGAGCATAAGCGAGTTGGTGAAGGCCTTCGGGTTCTTAGGCAGCATTCTTCCTTTCTACAAAGCTCACTACGGAATGGCTCATGCTGATGCTGATGACGATGGCTACATTGATGAGGACGAGCTCGACAAGCTCGTTGAGTATGCCGAGAAATTTCAGCACAAGAGGCACTGTTGA

Protein sequence

MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELDKLVEYAEKFQHKRHC

Homology

[Close]

BLAST of Lsi11G003250 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 5.7e-05
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 13  EDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELD 72
           E+++ +FR+ D +GDGR+S SEL   F  LG      +    MA ADAD DG+I  DE  
Sbjct: 39  EEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFA 98

Query: 73  KL 75
            L
Sbjct: 99  AL 100

[Close]

BLAST of Lsi11G003250 vs. ExPASy Swiss-Prot
Match: Q9NZT1 (Calmodulin-like protein 5 OS=Homo sapiens OX=9606 GN=CALML5 PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 7.5e-05
Identity = 24/72 (33.33%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 4   ASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDD 63
           A+ K +   ED++  FR  D DGDG +++ EL +A   LG  LP  +    +  AD D D
Sbjct: 72  AAKKARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQD 131

Query: 64  GYIDEDELDKLV 76
           G ++ +E  +++
Sbjct: 132 GRVNYEEFARML 143

[Close]

BLAST of Lsi11G003250 vs. ExPASy Swiss-Prot
Match: Q8RYJ9 (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 GN=CML23 PE=3 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 6.3e-04
Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 13 EDVKEIFREHDIDGDGRLSISEL---VKAFGFLGSILPFYKAHYGMAHADADDDGYIDED 72
          ++ + +F   D DGDG++S +EL   VKA   LG  +P  +    MA AD D DG +DE+
Sbjct: 5  DEFRRVFGSFDQDGDGKISATELRLCVKA--SLGEDMPDEEVQALMALADTDGDGLLDEE 64

Query: 73 ELDKLVEYAE 80
          E  +LV   E
Sbjct: 65 EFVRLVTEME 72

[Close]

BLAST of Lsi11G003250 vs. ExPASy Swiss-Prot
Match: Q84V36 (Polcalcin Che a 3 OS=Chenopodium album OX=3559 PE=1 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 8.3e-04
Identity = 25/57 (43.86%), Postives = 33/57 (57.89%), Query Frame = 0


Query: 14 DVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDE 71
          D + IF+  D +GDG++S SEL  A   LGS+ P  +    MA  D D DG+I  DE
Sbjct: 12 DRERIFKRFDTNGDGKISSSELGDALKTLGSVTP-DEVRRMMAEIDTDGDGFISFDE 67

[Close]

BLAST of Lsi11G003250 vs. ExPASy Swiss-Prot
Match: P94092 (Polcalcin Cyn d 7 OS=Cynodon dactylon OX=28909 PE=1 SV=2)

HSP 1 Score: 44.3 bits (103), Expect = 8.3e-04
Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 14 DVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDE 71
          D++ IF+  D +GDG++S++EL  A   LGS     +    MA  D D DG+ID DE
Sbjct: 6  DMEHIFKRFDTNGDGKISLAELTDALRTLGS-TSADEVQRMMAEIDTDGDGFIDFDE 61

[Close]

BLAST of Lsi11G003250 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.2e-35
Identity = 73/87 (83.91%), Postives = 82/87 (94.25%), Query Frame = 0


Query: 1  MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADA 60
          MSRA+SKL+ SRED+KEIFREHDIDGDGRLS+SE+VKAFGF GSILPFYKAHYGMAHAD 
Sbjct: 1  MSRAASKLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADE 60

Query: 61 DDDGYIDEDELDKLVEYAEKFQHKRHC 88
          + DGYI+E+ELDKLV+YAEKFQHKR C
Sbjct: 61 NGDGYIEEEELDKLVDYAEKFQHKRKC 87

[Close]

BLAST of Lsi11G003250 vs. ExPASy TrEMBL
Match: A0A0A0LRC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.6e-32
Identity = 67/87 (77.01%), Postives = 81/87 (93.10%), Query Frame = 0


Query: 1  MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADA 60
          MSRA+++L+ SRED+KEIFREHDIDGDGRLS++E+VKAFG  GSILPFYKAHYGMAHAD 
Sbjct: 1  MSRAATRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADE 60

Query: 61 DDDGYIDEDELDKLVEYAEKFQHKRHC 88
          + DG+I+E+ELDKLV+YA+KFQHKR C
Sbjct: 61 NGDGFIEEEELDKLVDYAQKFQHKRKC 87

[Close]

BLAST of Lsi11G003250 vs. ExPASy TrEMBL
Match: A0A0A0LKX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.4e-25
Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 6  SKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGY 65
          SK  FSRE++KEIFREHDIDGDG LSISEL+KA GFLG  +PFYKAHYGMA+ D + DG 
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66

Query: 66 IDEDELDKLVEYAEKFQHKR 86
          I EDELDKL++YAE+FQ +R
Sbjct: 67 ISEDELDKLIDYAERFQKRR 86

[Close]

BLAST of Lsi11G003250 vs. ExPASy TrEMBL
Match: A0A5A7V2Z9 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00190 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.2e-23
Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 6  SKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGY 65
          SK  FSRE++KEIFREHDIDGDG LSI EL+KA GFLG  +PFYKAHYGMA++D + DG 
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSIGELIKAMGFLGHSIPFYKAHYGMAYSDENGDGL 66

Query: 66 IDEDELDKLVEYAEK 81
          I EDELDKL++YAE+
Sbjct: 67 ISEDELDKLIDYAER 81

[Close]

BLAST of Lsi11G003250 vs. ExPASy TrEMBL
Match: A0A6J1CSH1 (probable calcium-binding protein CML15 OS=Momordica charantia OX=3673 GN=LOC111013915 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23
Identity = 54/78 (69.23%), Postives = 65/78 (83.33%), Query Frame = 0


Query: 3   RASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADD 62
           + + K+KFSR  +KEIF EHDIDGDG LS+SEL+KAF FLGS++P YKAHYG+A AD D 
Sbjct: 66  KKAPKIKFSRSQIKEIFMEHDIDGDGCLSVSELIKAFSFLGSVIPLYKAHYGLAFADDDG 125

Query: 63  DGYIDEDELDKLVEYAEK 81
           DG I E+ELDKLV+YAEK
Sbjct: 126 DGLISEEELDKLVDYAEK 143

[Close]

BLAST of Lsi11G003250 vs. NCBI nr
Match: KAA0060892.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa])

HSP 1 Score: 157.1 bits (396), Expect = 6.7e-35
Identity = 73/87 (83.91%), Postives = 82/87 (94.25%), Query Frame = 0


Query: 1  MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADA 60
          MSRA+SKL+ SRED+KEIFREHDIDGDGRLS+SE+VKAFGF GSILPFYKAHYGMAHAD 
Sbjct: 1  MSRAASKLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADE 60

Query: 61 DDDGYIDEDELDKLVEYAEKFQHKRHC 88
          + DGYI+E+ELDKLV+YAEKFQHKR C
Sbjct: 61 NGDGYIEEEELDKLVDYAEKFQHKRKC 87

[Close]

BLAST of Lsi11G003250 vs. NCBI nr
Match: KGN62516.1 (hypothetical protein Csa_022521 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 5.3e-32
Identity = 67/87 (77.01%), Postives = 81/87 (93.10%), Query Frame = 0


Query: 1  MSRASSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADA 60
          MSRA+++L+ SRED+KEIFREHDIDGDGRLS++E+VKAFG  GSILPFYKAHYGMAHAD 
Sbjct: 1  MSRAATRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADE 60

Query: 61 DDDGYIDEDELDKLVEYAEKFQHKRHC 88
          + DG+I+E+ELDKLV+YA+KFQHKR C
Sbjct: 61 NGDGFIEEEELDKLVDYAQKFQHKRKC 87

[Close]

BLAST of Lsi11G003250 vs. NCBI nr
Match: XP_004152805.1 (probable calcium-binding protein CML10 [Cucumis sativus])

HSP 1 Score: 141.7 bits (356), Expect = 2.9e-30
Identity = 64/83 (77.11%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 5   SSKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDG 64
           S++L+ SRED+KEIFREHDIDGDGRLS++E+VKAFG  GSILPFYKAHYGMAHAD + DG
Sbjct: 86  STRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADENGDG 145

Query: 65  YIDEDELDKLVEYAEKFQHKRHC 88
           +I+E+ELDKLV+YA+KFQHKR C
Sbjct: 146 FIEEEELDKLVDYAQKFQHKRKC 168

[Close]

BLAST of Lsi11G003250 vs. NCBI nr
Match: KGN62525.1 (hypothetical protein Csa_022453 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 2.8e-25
Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 0


Query: 6  SKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGY 65
          SK  FSRE++KEIFREHDIDGDG LSISEL+KA GFLG  +PFYKAHYGMA+ D + DG 
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66

Query: 66 IDEDELDKLVEYAEKFQHKR 86
          I EDELDKL++YAE+FQ +R
Sbjct: 67 ISEDELDKLIDYAERFQKRR 86

[Close]

BLAST of Lsi11G003250 vs. NCBI nr
Match: KAA0060886.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa])

HSP 1 Score: 117.9 bits (294), Expect = 4.5e-23
Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 6  SKLKFSREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGY 65
          SK  FSRE++KEIFREHDIDGDG LSI EL+KA GFLG  +PFYKAHYGMA++D + DG 
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSIGELIKAMGFLGHSIPFYKAHYGMAYSDENGDGL 66

Query: 66 IDEDELDKLVEYAEK 81
          I EDELDKL++YAE+
Sbjct: 67 ISEDELDKLIDYAER 81

[Close]

BLAST of Lsi11G003250 vs. TAIR 10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 43.9 bits (102), Expect = 7.7e-05
Identity = 27/81 (33.33%), Postives = 45/81 (55.56%), Query Frame = 0


Query: 4  ASSKLKFSRE---DVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADA 63
          +SS +KF  E   D++ +F   D + DGR+S  EL K+F  LG  +   +A   +  +D 
Sbjct: 9  SSSFMKFLEEKNRDLEAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDI 68

Query: 64 DDDGYIDEDELDKLVEYAEKF 82
          D DG +D +E   L++  ++F
Sbjct: 69 DGDGMLDINEFALLIKGNDEF 89

[Close]

BLAST of Lsi11G003250 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 43.5 bits (101), Expect = 1.0e-04
Identity = 21/62 (33.87%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 13 EDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELD 72
          E++K++F + D +GDG++S+ EL   F  +G+     + +  +   D D DGYI+ DE  
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 73 KL 75
           L
Sbjct: 82 TL 83

[Close]

BLAST of Lsi11G003250 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 43.5 bits (101), Expect = 1.0e-04
Identity = 21/62 (33.87%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 13 EDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDELD 72
          E++K++F + D +GDG++S+ EL   F  +G+     + +  +   D D DGYI+ DE  
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 73 KL 75
           L
Sbjct: 82 TL 83

[Close]

BLAST of Lsi11G003250 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 43.1 bits (100), Expect = 1.3e-04
Identity = 23/70 (32.86%), Postives = 37/70 (52.86%), Query Frame = 0


Query: 11 SREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDGYIDEDE 70
          S ED+K++F+  D + DG++SI EL    G L       +    M   D D +G+ID DE
Sbjct: 12 SMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDE 71

Query: 71 LDKLVEYAEK 81
             L + +++
Sbjct: 72 FVALFQISDQ 81

[Close]

BLAST of Lsi11G003250 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 )

HSP 1 Score: 42.0 bits (97), Expect = 2.9e-04
Identity = 19/54 (35.19%), Postives = 30/54 (55.56%), Query Frame = 0


Query: 11  SREDVKEIFREHDIDGDGRLSISELVKAFGFLGSILPFYKAHYGMAHADADDDG 65
           S+E+++++F   D DGDG++S  EL   FG +G  +    A   +   D D DG
Sbjct: 61  SKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADG 114

The following BLAST results are available for this feature:

BLAST of Lsi11G003250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RZB5	5.7e-05	43.55	Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9NZT1	7.5e-05	33.33	Calmodulin-like protein 5 OS=Homo sapiens OX=9606 GN=CALML5 PE=1 SV=2	[more]
Q8RYJ9	6.3e-04	40.00	Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q84V36	8.3e-04	43.86	Polcalcin Che a 3 OS=Chenopodium album OX=3559 PE=1 SV=1	[more]
P94092	8.3e-04	42.11	Polcalcin Cyn d 7 OS=Cynodon dactylon OX=28909 PE=1 SV=2	[more]

BLAST of Lsi11G003250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UYC0	3.2e-35	83.91	Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LRC1	2.6e-32	77.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1	[more]
A0A0A0LKX1	1.4e-25	72.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1	[more]
A0A5A7V2Z9	2.2e-23	72.00	Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1CSH1	2.8e-23	69.23	probable calcium-binding protein CML15 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Lsi11G003250 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060892.1	6.7e-35	83.91	putative calcium-binding protein CML10 [Cucumis melo var. makuwa]	[more]
KGN62516.1	5.3e-32	77.01	hypothetical protein Csa_022521 [Cucumis sativus]	[more]
XP_004152805.1	2.9e-30	77.11	probable calcium-binding protein CML10 [Cucumis sativus]	[more]
KGN62525.1	2.8e-25	72.50	hypothetical protein Csa_022453 [Cucumis sativus]	[more]
KAA0060886.1	4.5e-23	72.00	putative calcium-binding protein CML10 [Cucumis melo var. makuwa]	[more]

BLAST of Lsi11G003250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76640.1	7.7e-05	33.33	Calcium-binding EF-hand family protein	[more]
AT1G18210.1	1.0e-04	33.87	Calcium-binding EF-hand family protein	[more]
AT1G18210.2	1.0e-04	33.87	Calcium-binding EF-hand family protein	[more]
AT1G66400.1	1.3e-04	32.86	calmodulin like 23	[more]
AT3G50770.1	2.9e-04	35.19	calmodulin-like 41	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 14..42 e-value: 0.0069 score: 25.6 coord: 50..78 e-value: 62.0 score: 3.3
IPR002048	EF-hand domain	PFAM	PF00036	EF-hand_1	coord: 14..39 e-value: 3.5E-7 score: 29.3
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 58..75 e-value: 0.016 score: 14.7
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 55..81 score: 8.376417
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 10..45 score: 14.457615
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 14..75 e-value: 1.25511E-7 score: 42.5349
None	No IPR available	GENE3D	1.10.238.10		coord: 8..85 e-value: 2.3E-12 score: 48.3
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 59..71
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 23..35
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 7..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G003250.1	Lsi11G003250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding