Lsi11G001840 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G001840
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	recA DNA recombination family protein
Location	chr11: 1906147 .. 1909941 (+)
RNA-Seq Expression	Lsi11G001840
Synteny	Lsi11G001840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGAGTTCAGTGCATGTTCTTAAATGGTCACCCTGTCTTCTTCTTCGTCTTTCGATTTCCATTTCATACTTGCTCGTGCATATGGCTTCTAGCAGCTCTTCTTCTTCTTCTTCAGTTGCTGTTTATTCAAGTTAGCTCTCCATTTTTCTTTTTAGCTTGGAGTTGCTCTTTCTGTTCAGTGGGGGAGGTTTTGAAGAGGTTTAATGGCGAGGCTTATTCGAAATGCGTCTTTTCTTGGGCGCTCTCTTTTCCAGCACGAGGTTTCATTCACTTACACTGTTAAATCTTCTTTGTTTCCCTGTAGAACTTTTGGTGTGTGCTTTTGTTGTGGCGACTGATTATTTTAACTCTGTTTACAATATAGAATGAGCCCTCTTATTCGAAGAAGGAACAGAGATGAAATATTTTTTTTCTAATTTATCTTTTACGTCGTTTGGATTTTGACTTGACGATTGATTTTCTGCTTGCTTTCTTTGCAGGGCTACAGGAGAGGCATATTGGGAACGTGTACTCATTTATGTAATTTTTCGACCAAAGGTGCGAAATATTGGCTTTGATTACGTTATATGTGAAAACGATGTATAGTTCTCATGGTTTTGATGAATTTCTTGTGAAACAGACTGTTGAAATTTTTTAGACTAATTTGTATGAGAACAACGTTTATTCATTCACTCACGACCTATTAGAGAAAGTAGAGATAATGTATTTTGTTCATTACAATGTGTCTCAACAATATCAATATTTTATCAATCTGAAGGCAGAAGGAAGTCCAAGTCATCAGATGGGAGTGATTCTTGTGAAGAAAATTTGTCTAAGAAAGAGCTGGCCTTACAACAAGCCTTGGATCAGATAACTTCCACATTTGGAAAGGGGTCTATTATGTGGCTTGGCCGTTCATCATCATCTAGACATGTCCCTGTGGTTTCCACAGGTTCGTTTGCTTTGGATGTAGCTCTAGGAATTGGTGGCCTTCCTAAGGTATTTTATCTTACACTTCTTTAGGATGACTTTGTGAGGTTGAAGCATTTTCTCAATCACATATTTTCGAATCTCTATTTCTTTTGTTTAATTGTTTTAGAAGCCTTTATGAAGCTCCTTTCCTCAAAACATGTATTTGTCAATGAATTTTGAAGGGGGAAAAAAATACTGATACATGATGCCTGTGTTTCATGTTTGTGATATAACTTCATTAGATCTTTATAGGGTCGTGTAATCGAGATTTATGGTCCAGAGGCATCTGGAAAGACAACTCTTGCACTGCATGTAATCGCTGAATCCCAGAAGGAAGGAGGTACTTTTTAAATGATAAGTGAATGTGCTCACTCATTCTATATGTAAGGAAAATGAACGAGCACATTTACTCCTGCAGAAAGTTGTAATCTGATTACTGGCCTCCGCATGTATTTGTAGTTTGTTTAGGTAATTTTATTGCTTATGTTGGAAAAATATGCAAAACAAATGGGCACGAATACTATAAATAATACAAAGAACATCAACCAGCAAATATAAAAATATTAATCAGTGAAATAGGGTTTAGAAAGCCTGTTACTTTGATTGAGGTGCATAGCAGAATTTTGTTCATAGAGAAGGTGTGCCGCTTGCATTGAGTTATTTGACACTCCACTCCCACGATACAACTCCCTTCAAGAAAGCTTGTGTACATCTAAAGTTTTCTTATAAATCTTCATTAACTTCTATGCTTAAGGAAAGAGAAAAGTGCTGACATTTCTTCCATTAAAGTCCATTTCCACAAAACTCCATTGAGCAAACATGTCAACGAGGATTCATAAGAGAGTTTAACTGCACGGCACACAAGTTTTTTTTTTGAAAGGAGATGTATCTTTGGAGTGGACTGCCTAATAACTCAATGTACTCAGGGCATGCCCTTCTCTAAGGACAAATTAATAACAGGCTCTTACTAATTAATATTTTTATATTTGTTGGTTATTGTTCTGTTTACAGTGTTCTTACCCGTTTGTTTTGCATATTTTTTCCAACACGTTATTCATAGACCATTTTCATATCGCCCATGCTAAACTGTTTATATTTGTATTGTATCATCCTTCGGGGAAGAGAACAATTCGAATTAATGTGTGCTTTTTATCAAACAATAGAAGATAGGTTTGGAGGTGAAATTTCTAAGTATTTCTGTATCAGACATAAACATAATGCTGGGAATTTGCTTTGGTCTTTTTATGCAGGTTACTGTGTCTTTGTTGATGCGGAGCATGCTCTTGATCCAGCCCTTGCTCAGGCTATTGGAGTGAACACTGAGAATCTGCTCCTATCTCAACCAGACTGTGGTGAACAAGCTCTTAGTCTCGTGGATACCCTAATCCGAAGTGGTTCAGTTGATGTTGTTGTTGTTGACAGTGTGAGTATGATGCAAACTCTTTTGAAGAAAACAGTTGGAATTTTGTTGTTTCTATATGTTTAATGTCCCTTTTAATTTTTTGGTATGGGAAACAGTAACAATTTCATTGACATGATGAAATGAGTTTAAATGTGCTTTTTTCGGTACATCTTAAAACCGTGATTGCCTCTATGACAGGTAGCTGCTCTTGTGCCTAAAGGTGAACTCGATGGCGAGATGGGTGATGCCCACATGGCTATGCAGGCTAGACTCATGAGCCAAGCACTTCGCAAATTGAGCCATTCTTTATCCCTATCACAGACTGTATTGATATTCATTAATCAGGTCTCGTTTTATTTCTCAATTGTCTCAGCAATACACTGTAATTATTCACGTTGTGATGGCATCAATCATATATTTAGTTATCAGTTTTAGTTCAGTAGTATTGCACTCATTGTACGCATACGTCTCTAGGTAAGGTCAAAGCTGTCAACTTTTGGAGGATTTGGCGGTCCAACTGAAGTTACCTGTGGTGGCAATGCCTTAAAGTTTTATGCCTCGGTGCGACTTAATATTAAAAGGATAGGTCTTGTCAAGAAGGGGGAAGAGGTATAAAAACTAAATTGCTACTAAATCTGGATACTTACTGTGTAGATGCATTTTTTTTATGCGTATATTAGTTAATGCATTGTTGTATCATTCAATTGCAGACGTTGGGAAGCCAAGTTCAAGTAAAAGTGGTGAAGAATAAGCTCGCTCCTCCATTTCGGATTGCTCAATTTGAGCTCGAGTTTGGAAAAGGTATATGTAAGGAATCAGAGATTATAAATCTGGGGTTGAAATACAAATTCATGTCCAAGGCAGGTGCATTCTATAGCTTTAATGGTCGAAGTTTCCATGGCAAAGATGCCTTGAAAACTTTTCTGTCAGAGAATGAAGATGCTAGGGAAGAACTAATTATGAAACTTCGGGATAAACTACTCGATGTGGAAATGGGTAAGCCACGAAACGGAGATGAAACAGAAGAAGGAAGTCTCCGAGAAGATATTACCACTTCACCTGATTCTACAGAGGAAGATGCAGTTACAGCTGTGGAAGTATAAACTTGTGGATTCCTTCTAATTGTGAATTCAAGCAAGTCCATCCTTATTATCCTGGATCTATTCCTCCTCTCTCCTTGCCAATGCTATCAGAGTTTCACCAGGCACAAAGTTTTGGATCTCTTTACCACATTTTTTTAATCTTTTAGTTTGTGCCTTTGTTGTTCTAGGGATGGATATGATGATAACCCTTGTAAATATCAGCCATTTTCATCAAGAATGGAATGTTGAAAATGGAGATTTTAGACAGTCAGAATGCCAGTTTAAGGCTGCTCATCCGAAACGTCGATGCTCCTCGGGCCGCCGATCATCCAACTGACATCAAGATTTCGTATTGA

mRNA sequence

ATGACAGAAGGTTTAATGGCGAGGCTTATTCGAAATGCGTCTTTTCTTGGGCGCTCTCTTTTCCAGCACGAGGGCTACAGGAGAGGCATATTGGGAACGTGTACTCATTTATGTAATTTTTCGACCAAAGGCAGAAGGAAGTCCAAGTCATCAGATGGGAGTGATTCTTGTGAAGAAAATTTGTCTAAGAAAGAGCTGGCCTTACAACAAGCCTTGGATCAGATAACTTCCACATTTGGAAAGGGGTCTATTATGTGGCTTGGCCGTTCATCATCATCTAGACATGTCCCTGTGGTTTCCACAGGTTCGTTTGCTTTGGATGTAGCTCTAGGAATTGGTGGCCTTCCTAAGGATGACTTTGTGAGGTTGAAGCATTTTCTCAATCACATATTTTCGAATCTCTATTTCTTTTGTTTAATTGTTTTAGAAGCCTTTATGAAGCTCCTTTCCTCAAAACATGGTCGTGTAATCGAGATTTATGGTCCAGAGGCATCTGGAAAGACAACTCTTGCACTGCATGTAATCGCTGAATCCCAGAAGGAAGGAGGTTACTGTGTCTTTGTTGATGCGGAGCATGCTCTTGATCCAGCCCTTGCTCAGGCTATTGGAGTGAACACTGAGAATCTGCTCCTATCTCAACCAGACTGTGGTGAACAAGCTCTTAGTCTCGTGGATACCCTAATCCGAAGTGGTTCAGTTGATGTTGTTGTTGTTGACAGTGTAGCTGCTCTTGTGCCTAAAGGTGAACTCGATGGCGAGATGGGTGATGCCCACATGGCTATGCAGGCTAGACTCATGAGCCAAGCACTTCGCAAATTGAGCCATTCTTTATCCCTATCACAGACTGTATTGATATTCATTAATCAGCAATACACTGTAATTATTCACGTTGTGATGGCATCAATCATATATTTAGTTATCAGTTTTAGTTCAGTAGTATTGCACTCATTGTACGCATACGTCTCTAGGTCAAAGCTGTCAACTTTTGGAGGATTTGGCGGTCCAACTGAAGTTACCTGTGGTGGCAATGCCTTAAAGTTTTATGCCTCGGTGCGACTTAATATTAAAAGGATAGGTCTTGTCAAGAAGGGGGAAGAGACGTTGGGAAGCCAAGTTCAAGTAAAAGTGGTGAAGAATAAGCTCGCTCCTCCATTTCGGATTGCTCAATTTGAGCTCGAGTTTGGAAAAGGTATATGTAAGGAATCAGAGATTATAAATCTGGGGTTGAAATACAAATTCATGTCCAAGGCAGGTGCATTCTATAGCTTTAATGGTCGAAGTTTCCATGGCAAAGATGCCTTGAAAACTTTTCTGTCAGAGAATGAAGATGCTAGGGAAGAACTAATTATGAAACTTCGGGATAAACTACTCGATGTGGAAATGGGTAAGCCACGAAACGGAGATGAAACAGAAGAAGGAAGTCTCCGAGAAGATATTACCACTTCACCTGATTCTACAGAGGAAGATGCAGTTACAGCTGTGGAAAATGGAATGTTGAAAATGGAGATTTTAGACAGTCAGAATGCCAGTTTAAGGCTGCTCATCCGAAACGTCGATGCTCCTCGGGCCGCCGATCATCCAACTGACATCAAGATTTCGTATTGA

Coding sequence (CDS)

ATGACAGAAGGTTTAATGGCGAGGCTTATTCGAAATGCGTCTTTTCTTGGGCGCTCTCTTTTCCAGCACGAGGGCTACAGGAGAGGCATATTGGGAACGTGTACTCATTTATGTAATTTTTCGACCAAAGGCAGAAGGAAGTCCAAGTCATCAGATGGGAGTGATTCTTGTGAAGAAAATTTGTCTAAGAAAGAGCTGGCCTTACAACAAGCCTTGGATCAGATAACTTCCACATTTGGAAAGGGGTCTATTATGTGGCTTGGCCGTTCATCATCATCTAGACATGTCCCTGTGGTTTCCACAGGTTCGTTTGCTTTGGATGTAGCTCTAGGAATTGGTGGCCTTCCTAAGGATGACTTTGTGAGGTTGAAGCATTTTCTCAATCACATATTTTCGAATCTCTATTTCTTTTGTTTAATTGTTTTAGAAGCCTTTATGAAGCTCCTTTCCTCAAAACATGGTCGTGTAATCGAGATTTATGGTCCAGAGGCATCTGGAAAGACAACTCTTGCACTGCATGTAATCGCTGAATCCCAGAAGGAAGGAGGTTACTGTGTCTTTGTTGATGCGGAGCATGCTCTTGATCCAGCCCTTGCTCAGGCTATTGGAGTGAACACTGAGAATCTGCTCCTATCTCAACCAGACTGTGGTGAACAAGCTCTTAGTCTCGTGGATACCCTAATCCGAAGTGGTTCAGTTGATGTTGTTGTTGTTGACAGTGTAGCTGCTCTTGTGCCTAAAGGTGAACTCGATGGCGAGATGGGTGATGCCCACATGGCTATGCAGGCTAGACTCATGAGCCAAGCACTTCGCAAATTGAGCCATTCTTTATCCCTATCACAGACTGTATTGATATTCATTAATCAGCAATACACTGTAATTATTCACGTTGTGATGGCATCAATCATATATTTAGTTATCAGTTTTAGTTCAGTAGTATTGCACTCATTGTACGCATACGTCTCTAGGTCAAAGCTGTCAACTTTTGGAGGATTTGGCGGTCCAACTGAAGTTACCTGTGGTGGCAATGCCTTAAAGTTTTATGCCTCGGTGCGACTTAATATTAAAAGGATAGGTCTTGTCAAGAAGGGGGAAGAGACGTTGGGAAGCCAAGTTCAAGTAAAAGTGGTGAAGAATAAGCTCGCTCCTCCATTTCGGATTGCTCAATTTGAGCTCGAGTTTGGAAAAGGTATATGTAAGGAATCAGAGATTATAAATCTGGGGTTGAAATACAAATTCATGTCCAAGGCAGGTGCATTCTATAGCTTTAATGGTCGAAGTTTCCATGGCAAAGATGCCTTGAAAACTTTTCTGTCAGAGAATGAAGATGCTAGGGAAGAACTAATTATGAAACTTCGGGATAAACTACTCGATGTGGAAATGGGTAAGCCACGAAACGGAGATGAAACAGAAGAAGGAAGTCTCCGAGAAGATATTACCACTTCACCTGATTCTACAGAGGAAGATGCAGTTACAGCTGTGGAAAATGGAATGTTGAAAATGGAGATTTTAGACAGTCAGAATGCCAGTTTAAGGCTGCTCATCCGAAACGTCGATGCTCCTCGGGCCGCCGATCATCCAACTGACATCAAGATTTCGTATTGA

Protein sequence

MTEGLMARLIRNASFLGRSLFQHEGYRRGILGTCTHLCNFSTKGRRKSKSSDGSDSCEENLSKKELALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLKHFLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIYLVISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNGRSFHGKDALKTFLSENEDAREELIMKLRDKLLDVEMGKPRNGDETEEGSLREDITTSPDSTEEDAVTAVENGMLKMEILDSQNASLRLLIRNVDAPRAADHPTDIKISY

Homology

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BLAST of Lsi11G001840 vs. ExPASy Swiss-Prot
Match: Q9ZUP2 (DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2)

HSP 1 Score: 563.1 bits (1450), Expect = 3.3e-159
Identity = 314/490 (64.08%), Postives = 363/490 (74.08%), Query Frame = 0


Query: 6   MARLIRNASFLGRSLFQHEGYRRGILGTCTHLCNFSTKGRRKSKSSDGSDSCEENLSKKE 65
           MAR++RN   L  SLF  E  RR ++GT   L  F+ K ++KSK SDG+ S EE +SKKE
Sbjct: 1   MARILRNVYSLRSSLFSSELLRRSVVGTSFQLRGFAAKAKKKSK-SDGNGSSEEGMSKKE 60

Query: 66  LALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLKH 125
           +ALQQALDQITS+FGKGSIM+LGR+ S R+VPV STGSFALDVALG+GGLPK        
Sbjct: 61  IALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPK-------- 120

Query: 126 FLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGYC 185
                                       GRV+EIYGPEASGKTTLALHVIAE+QK+GG C
Sbjct: 121 ----------------------------GRVVEIYGPEASGKTTLALHVIAEAQKQGGTC 180

Query: 186 VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 245
           VFVDAEHALD +LA+AIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDV+VVDSVAALV
Sbjct: 181 VFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALV 240

Query: 246 PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIYL 305
           PKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFINQ                
Sbjct: 241 PKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTLLIFINQ---------------- 300

Query: 306 VISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGE 365
                            RSKLSTFGGFGGPTEVTCGGNALKFYAS+RLNIKRIGL+KKGE
Sbjct: 301 ----------------VRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGE 360

Query: 366 ETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG 425
           ET GSQV VK+VKNKLAPPFR AQFELEFGKGICK +EII+L +K+KF++K G FY+ NG
Sbjct: 361 ETTGSQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNG 419

Query: 426 RSFHGKDALKTFLSENEDAREELIMKLRDKLL-DVEMGKPRNGDETEEGSLREDITTSPD 485
           +++HGK+ALK FL +NE  +EEL+ KL+DKL+ D    K    +  EE SLR  +  SPD
Sbjct: 421 KNYHGKEALKRFLKQNESDQEELMKKLQDKLIADEAADKETESESEEEDSLR--VVVSPD 419

Query: 486 STEEDAVTAV 495
           +T++++   V
Sbjct: 481 NTDDESPALV 419

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BLAST of Lsi11G001840 vs. ExPASy Swiss-Prot
Match: Q31F89 (Protein RecA OS=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2) OX=317025 GN=recA PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 2.4e-93
Identity = 196/410 (47.80%), Postives = 260/410 (63.41%), Query Frame = 0


Query: 64  KELALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRL 123
           K+ AL+ AL QI   FGKGSIM +G   + R +  VSTGS  LDVALGIGGLP+      
Sbjct: 5   KKKALEAALGQIEKQFGKGSIMRMGDKGAIRDIDSVSTGSLGLDVALGIGGLPR------ 64

Query: 124 KHFLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGG 183
                                         GRV+EIYGPE+SGKTTL LH IAE QK GG
Sbjct: 65  ------------------------------GRVVEIYGPESSGKTTLTLHAIAEMQKMGG 124

Query: 184 YCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAA 243
              FVDAEHALDP  A+ +GV+ +NLL+SQPD GEQAL + D+L+RSG+VD+V+VDSVAA
Sbjct: 125 TAAFVDAEHALDPIYAEKLGVDIDNLLVSQPDTGEQALEITDSLVRSGAVDIVIVDSVAA 184

Query: 244 LVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASII 303
           L PK E++G+MGD+HM +QARLMSQALRKL+ ++  + T++IFINQ              
Sbjct: 185 LTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKRTNTLVIFINQ-------------- 244

Query: 304 YLVISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKK 363
                              R K+     FG P E T GGNALKFY+SVRL+I+RIG +KK
Sbjct: 245 ------------------IRMKIGVM--FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKK 304

Query: 364 GEETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSF 423
           G+E LG++ +VKVVKNK++PPF+  +FE+ +G+GI +E E+I+LG+K K + KAGA+YS+
Sbjct: 305 GDEILGNETRVKVVKNKVSPPFKQVEFEILYGQGISREGEVIDLGVKEKLIEKAGAWYSY 339

Query: 424 NGRSF-HGKDALKTFLSENEDAREELIMKLRDKLLDVEMGKPRNGDETEE 473
            G+    GKD ++ FL +N D  E L ++++++L    M KP     T+E
Sbjct: 365 QGQKIGQGKDNVRQFLKDNPDIYETLQVQIKERL----MPKPNAPKATDE 339

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BLAST of Lsi11G001840 vs. ExPASy Swiss-Prot
Match: B8GQV3 (Protein RecA OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=recA PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 3.4e-92
Identity = 198/415 (47.71%), Postives = 259/415 (62.41%), Query Frame = 0


Query: 58  EENLSKKELALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPK 117
           +EN  K   AL  AL QI   FGKG++M +G S++ R V  +STGS ALD+ALGIGGLPK
Sbjct: 2   DENRKK---ALSAALGQIERQFGKGAVMRMGDSTAVRDVEAISTGSLALDIALGIGGLPK 61

Query: 118 DDFVRLKHFLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAE 177
                                               GRV+EIYGPE+SGKTTL L VIAE
Sbjct: 62  ------------------------------------GRVVEIYGPESSGKTTLTLQVIAE 121

Query: 178 SQKEGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVV 237
            QK+GG   FVDAEHALDP  A+ +GVN ++LL+SQPD GEQAL + D L+RSG+VDVVV
Sbjct: 122 CQKQGGTAAFVDAEHALDPGYAEKLGVNVDDLLVSQPDTGEQALEIADMLVRSGAVDVVV 181

Query: 238 VDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHV 297
           VDSVAAL PK E++GEMGDAH+ +QARLMSQALRKL+ ++  S T++IFINQ        
Sbjct: 182 VDSVAALTPKAEIEGEMGDAHVGLQARLMSQALRKLTANIKRSNTLVIFINQ-------- 241

Query: 298 VMASIIYLVISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKR 357
                                    R K+     FG P E T GGNALKFYASVRL+I+R
Sbjct: 242 ------------------------IRMKIGVM--FGNP-ETTTGGNALKFYASVRLDIRR 301

Query: 358 IGLVKKGEETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKA 417
            G +KKG+E +G++ +VKVVKNK+APPF+ A+FE+ +G+GI +  E+I++G++   + K+
Sbjct: 302 TGAIKKGDEVIGNETRVKVVKNKVAPPFKQAEFEILYGEGISRLGEVIDIGVQDGIVDKS 342

Query: 418 GAFYSFNG-RSFHGKDALKTFLSENEDAREELIMKLRDKLLDVEMGKPRNGDETE 472
           GA+YS+NG R   GKD  +TFL E+ +   E+  ++R+K L     K    +  E
Sbjct: 362 GAWYSYNGERIGQGKDNARTFLKEHPEMAGEIERQIREKHLPKRSAKADEAESAE 342

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BLAST of Lsi11G001840 vs. ExPASy Swiss-Prot
Match: O32377 (Protein RecA OS=Allochromatium vinosum OX=1049 GN=recA PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 4.5e-92
Identity = 197/401 (49.13%), Postives = 253/401 (63.09%), Query Frame = 0


Query: 58  EENLSKKELALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPK 117
           +EN  K   AL  AL QI   FGKGS+M +G   + R++  +STGS  LD+ALGIGG+PK
Sbjct: 2   DENRKK---ALAAALTQIEKQFGKGSVMRMGDVGAVRNIEAISTGSLGLDLALGIGGVPK 61

Query: 118 DDFVRLKHFLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAE 177
                                               GRVIEIYGPE+SGKTTL LH+IAE
Sbjct: 62  ------------------------------------GRVIEIYGPESSGKTTLTLHIIAE 121

Query: 178 SQKEGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVV 237
           SQK GG   FVDAEHALDP  A+ +GVN  +LL+SQPD GEQAL + D L+RSG+VDVVV
Sbjct: 122 SQKLGGTAAFVDAEHALDPVYAEKLGVNMTDLLVSQPDTGEQALEITDMLVRSGAVDVVV 181

Query: 238 VDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHV 297
           VDSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++  S   +IFINQ        
Sbjct: 182 VDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRSNCCVIFINQ-------- 241

Query: 298 VMASIIYLVISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKR 357
                                    R K+     FG P E T GGNALKFYASVRL+I+R
Sbjct: 242 ------------------------IRMKIGVM--FGSP-ETTTGGNALKFYASVRLDIRR 301

Query: 358 IGLVKKGEETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKA 417
            G +KKG+E +G++ +VKVVKNK+APPFR A+F++ +G+GI +E EII+LG+   F+ K+
Sbjct: 302 TGAIKKGDEVIGNETKVKVVKNKVAPPFRQAEFDILYGQGISREGEIIDLGVAEGFIDKS 328

Query: 418 GAFYSFNG-RSFHGKDALKTFLSENEDAREELIMKLRDKLL 458
           GA+YS++G R   GKD ++ FL EN    + +  ++RDKLL
Sbjct: 362 GAWYSYDGNRIGQGKDNVRNFLCENPGIAQAIEARIRDKLL 328

[Close]

BLAST of Lsi11G001840 vs. ExPASy Swiss-Prot
Match: Q5X4B5 (Protein RecA OS=Legionella pneumophila (strain Paris) OX=297246 GN=recA PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 7.6e-92
Identity = 193/405 (47.65%), Postives = 254/405 (62.72%), Query Frame = 0


Query: 58  EENLSKKELALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPK 117
           EEN   K+ AL  AL QI   FGKGS+M +G S+ SR +  +STGS  LD+ALGIGGLPK
Sbjct: 2   EEN---KQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPK 61

Query: 118 DDFVRLKHFLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAE 177
                                               GR++EIYGPE+SGKTTL L VIAE
Sbjct: 62  ------------------------------------GRIVEIYGPESSGKTTLTLQVIAE 121

Query: 178 SQKEGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVV 237
            QK GG   F+DAEHALDP+ AQ +GV  + LL+SQPD GEQAL + D L+RS +VDVV+
Sbjct: 122 CQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQALEITDMLVRSAAVDVVI 181

Query: 238 VDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHV 297
           +DSVAAL PK E++GEMGD+H+ +QARLMSQALRKL+ ++  S T++IFINQ        
Sbjct: 182 IDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQ-------- 241

Query: 298 VMASIIYLVISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKR 357
                                    R K+     FG P E T GGNALKFYASVRL+I+R
Sbjct: 242 ------------------------IRMKIGVM--FGSP-ETTTGGNALKFYASVRLDIRR 301

Query: 358 IGLVKKGEETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKA 417
           IG +KKGEE LGS+ +VKVVKNK+APPF++ +F++ + +GI +ESEIINLG++   + K+
Sbjct: 302 IGSIKKGEEILGSETRVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKS 332

Query: 418 GAFYSFNGRSF-HGKDALKTFLSENEDAREELIMKLRDKLLDVEM 462
           GA+YS+       GK+ ++ +L EN     EL  ++R +LL+ ++
Sbjct: 362 GAWYSYKQEKIGQGKENVRLYLKENPQVAAELEQQIRTELLEKKL 332

[Close]

BLAST of Lsi11G001840 vs. ExPASy TrEMBL
Match: A0A6J1DKI3 (DNA repair protein recA homolog 3, mitochondrial-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021929 PE=3 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 8.5e-203
Identity = 394/490 (80.41%), Postives = 417/490 (85.10%), Query Frame = 0


Query: 6   MARLIRNASFLGRSLFQHEGYRRGILGTCTHLCNFSTKGRRKSKSSDGSDSCEENLSKKE 65
           MARLIR+ASF  RSLF HEG+RRGILGT T +C+FSTKGRRKSKSSDGSDSCEENLSKKE
Sbjct: 1   MARLIRSASFFRRSLFHHEGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKKE 60

Query: 66  LALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLKH 125
           LALQQALDQITSTFGKGSIMWLGRS +SRHVPVVSTGSFALD+ALG+GGLPK        
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPK-------- 120

Query: 126 FLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGYC 185
                                       GRVIEIYGPEASGKTTLALHVIAESQK+GGYC
Sbjct: 121 ----------------------------GRVIEIYGPEASGKTTLALHVIAESQKQGGYC 180

Query: 186 VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 245
           VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV
Sbjct: 181 VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 240

Query: 246 PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIYL 305
           PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFIN Q    + +  + + +L
Sbjct: 241 PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFIN-QVLFCVRLSRSILQFL 300

Query: 306 VISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGE 365
           + S S   L +  +   RSKLSTFGGFGGPTEVTCGGNALKFYAS+RLNIKRIGLVKKGE
Sbjct: 301 MQSSSGTALGNCMSLQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGE 360

Query: 366 ETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG 425
           ETLGSQVQVKVVKNKLAPPFR AQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG
Sbjct: 361 ETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG 420

Query: 426 RSFHGKDALKTFLSENEDAREELIMKLRDKLLDVEMGKPRNGDETEEGSLREDITTSPDS 485
           RSFHGKDALKTFL++N DAREELI KLRDKLLD++M K  NGDETEE S REDI  SPDS
Sbjct: 421 RSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEE-SAREDI-ISPDS 451

Query: 486 TEEDAVTAVE 496
           T+EDAVTAVE
Sbjct: 481 TDEDAVTAVE 451

[Close]

BLAST of Lsi11G001840 vs. ExPASy TrEMBL
Match: A0A6J1DN29 (DNA repair protein recA homolog 3, mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021929 PE=3 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 2.1e-201
Identity = 394/491 (80.24%), Postives = 417/491 (84.93%), Query Frame = 0


Query: 6   MARLIRNASFLGRSLFQHE-GYRRGILGTCTHLCNFSTKGRRKSKSSDGSDSCEENLSKK 65
           MARLIR+ASF  RSLF HE G+RRGILGT T +C+FSTKGRRKSKSSDGSDSCEENLSKK
Sbjct: 1   MARLIRSASFFRRSLFHHEQGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKK 60

Query: 66  ELALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLK 125
           ELALQQALDQITSTFGKGSIMWLGRS +SRHVPVVSTGSFALD+ALG+GGLPK       
Sbjct: 61  ELALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPK------- 120

Query: 126 HFLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGY 185
                                        GRVIEIYGPEASGKTTLALHVIAESQK+GGY
Sbjct: 121 -----------------------------GRVIEIYGPEASGKTTLALHVIAESQKQGGY 180

Query: 186 CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAAL 245
           CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAAL
Sbjct: 181 CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAAL 240

Query: 246 VPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIY 305
           VPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFIN Q    + +  + + +
Sbjct: 241 VPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFIN-QVLFCVRLSRSILQF 300

Query: 306 LVISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKG 365
           L+ S S   L +  +   RSKLSTFGGFGGPTEVTCGGNALKFYAS+RLNIKRIGLVKKG
Sbjct: 301 LMQSSSGTALGNCMSLQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKG 360

Query: 366 EETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFN 425
           EETLGSQVQVKVVKNKLAPPFR AQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFN
Sbjct: 361 EETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFN 420

Query: 426 GRSFHGKDALKTFLSENEDAREELIMKLRDKLLDVEMGKPRNGDETEEGSLREDITTSPD 485
           GRSFHGKDALKTFL++N DAREELI KLRDKLLD++M K  NGDETEE S REDI  SPD
Sbjct: 421 GRSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEE-SAREDI-ISPD 452

Query: 486 STEEDAVTAVE 496
           ST+EDAVTAVE
Sbjct: 481 STDEDAVTAVE 452

[Close]

BLAST of Lsi11G001840 vs. ExPASy TrEMBL
Match: A0A6J1DMJ4 (DNA repair protein recA homolog 3, mitochondrial-like isoform X4 OS=Momordica charantia OX=3673 GN=LOC111021929 PE=3 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 6.1e-201
Identity = 390/490 (79.59%), Postives = 405/490 (82.65%), Query Frame = 0


Query: 6   MARLIRNASFLGRSLFQHEGYRRGILGTCTHLCNFSTKGRRKSKSSDGSDSCEENLSKKE 65
           MARLIR+ASF  RSLF HEG+RRGILGT T +C+FSTKGRRKSKSSDGSDSCEENLSKKE
Sbjct: 1   MARLIRSASFFRRSLFHHEGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKKE 60

Query: 66  LALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLKH 125
           LALQQALDQITSTFGKGSIMWLGRS +SRHVPVVSTGSFALD+ALG+GGLPK        
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPK-------- 120

Query: 126 FLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGYC 185
                                       GRVIEIYGPEASGKTTLALHVIAESQK+GGYC
Sbjct: 121 ----------------------------GRVIEIYGPEASGKTTLALHVIAESQKQGGYC 180

Query: 186 VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 245
           VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV
Sbjct: 181 VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 240

Query: 246 PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIYL 305
           PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFINQ                
Sbjct: 241 PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ---------------- 300

Query: 306 VISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGE 365
                            RSKLSTFGGFGGPTEVTCGGNALKFYAS+RLNIKRIGLVKKGE
Sbjct: 301 ----------------VRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGE 360

Query: 366 ETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG 425
           ETLGSQVQVKVVKNKLAPPFR AQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG
Sbjct: 361 ETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG 420

Query: 426 RSFHGKDALKTFLSENEDAREELIMKLRDKLLDVEMGKPRNGDETEEGSLREDITTSPDS 485
           RSFHGKDALKTFL++N DAREELI KLRDKLLD++M K  NGDETEE S REDI  SPDS
Sbjct: 421 RSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEE-SAREDI-ISPDS 420

Query: 486 TEEDAVTAVE 496
           T+EDAVTAVE
Sbjct: 481 TDEDAVTAVE 420

[Close]

BLAST of Lsi11G001840 vs. ExPASy TrEMBL
Match: A0A6J1DPM9 (DNA repair protein recA homolog 3, mitochondrial-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111021929 PE=3 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 1.5e-199
Identity = 390/491 (79.43%), Postives = 405/491 (82.48%), Query Frame = 0


Query: 6   MARLIRNASFLGRSLFQHE-GYRRGILGTCTHLCNFSTKGRRKSKSSDGSDSCEENLSKK 65
           MARLIR+ASF  RSLF HE G+RRGILGT T +C+FSTKGRRKSKSSDGSDSCEENLSKK
Sbjct: 1   MARLIRSASFFRRSLFHHEQGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKK 60

Query: 66  ELALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLK 125
           ELALQQALDQITSTFGKGSIMWLGRS +SRHVPVVSTGSFALD+ALG+GGLPK       
Sbjct: 61  ELALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPK------- 120

Query: 126 HFLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGY 185
                                        GRVIEIYGPEASGKTTLALHVIAESQK+GGY
Sbjct: 121 -----------------------------GRVIEIYGPEASGKTTLALHVIAESQKQGGY 180

Query: 186 CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAAL 245
           CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAAL
Sbjct: 181 CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAAL 240

Query: 246 VPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIY 305
           VPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFINQ               
Sbjct: 241 VPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ--------------- 300

Query: 306 LVISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKG 365
                             RSKLSTFGGFGGPTEVTCGGNALKFYAS+RLNIKRIGLVKKG
Sbjct: 301 -----------------VRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKG 360

Query: 366 EETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFN 425
           EETLGSQVQVKVVKNKLAPPFR AQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFN
Sbjct: 361 EETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFN 420

Query: 426 GRSFHGKDALKTFLSENEDAREELIMKLRDKLLDVEMGKPRNGDETEEGSLREDITTSPD 485
           GRSFHGKDALKTFL++N DAREELI KLRDKLLD++M K  NGDETEE S REDI  SPD
Sbjct: 421 GRSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEE-SAREDI-ISPD 421

Query: 486 STEEDAVTAVE 496
           ST+EDAVTAVE
Sbjct: 481 STDEDAVTAVE 421

[Close]

BLAST of Lsi11G001840 vs. ExPASy TrEMBL
Match: A0A6J1KB04 (DNA repair protein recA homolog 3, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493837 PE=3 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 1.4e-192
Identity = 373/490 (76.12%), Postives = 393/490 (80.20%), Query Frame = 0


Query: 6   MARLIRNASFLGRSLFQHEGYRRGILGTCTHLCNFSTKGRRKSKSSDGSDSCEENLSKKE 65
           MARLIRNASF+GR LFQHE YRRGILGT T LC+FSTKG+RKSKSSDGSDSCEENLSKKE
Sbjct: 1   MARLIRNASFVGRCLFQHERYRRGILGTSTQLCSFSTKGKRKSKSSDGSDSCEENLSKKE 60

Query: 66  LALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLKH 125
           LALQQALDQITSTFGKGSIMWLGRS SSRHVPVV TGSF LD+ALGIGGLPK        
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVSSRHVPVVPTGSFELDMALGIGGLPK-------- 120

Query: 126 FLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGYC 185
                                       GRVIEIYGPEASGKTTLALHVIAESQK+GGYC
Sbjct: 121 ----------------------------GRVIEIYGPEASGKTTLALHVIAESQKQGGYC 180

Query: 186 VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 245
           VFVDAEHALDP+LAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV
Sbjct: 181 VFVDAEHALDPSLAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 240

Query: 246 PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIYL 305
           PKGELDGEMGDAHMAMQARLMSQALRKL HSLSLSQTVLIFINQ                
Sbjct: 241 PKGELDGEMGDAHMAMQARLMSQALRKLCHSLSLSQTVLIFINQ---------------- 300

Query: 306 VISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGE 365
                            RSKLSTF GFGGPTEVTCGGNALKFYASVRLNI+R+   K GE
Sbjct: 301 ----------------VRSKLSTF-GFGGPTEVTCGGNALKFYASVRLNIRRVAFAKNGE 360

Query: 366 ETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG 425
           E +GSQVQVKVVKNKLAPPFR AQF+LEFGKGICKESEIINLGLKYKFMS+AG FYS NG
Sbjct: 361 EIVGSQVQVKVVKNKLAPPFRTAQFDLEFGKGICKESEIINLGLKYKFMSRAGGFYSCNG 420

Query: 426 RSFHGKDALKTFLSENEDAREELIMKLRDKLLDVEMGKPRNGDETEEGSLREDITTSPDS 485
           R+F GK+ALKTFLSENED RE+L  KLRDK+ D + GK  N DET+EGS++EDI TSPDS
Sbjct: 421 RNFRGKEALKTFLSENEDVREDLFTKLRDKIHDEQRGKSPNRDETDEGSVQEDIITSPDS 421

Query: 486 TEEDAVTAVE 496
           T+EDAVTAVE
Sbjct: 481 TDEDAVTAVE 421

[Close]

BLAST of Lsi11G001840 vs. NCBI nr
Match: XP_038890910.1 (DNA repair protein recA homolog 3, mitochondrial [Benincasa hispida])

HSP 1 Score: 731.9 bits (1888), Expect = 4.0e-207
Identity = 398/490 (81.22%), Postives = 410/490 (83.67%), Query Frame = 0


Query: 6   MARLIRNASFLGRSLFQHEGYRRGILGTCTHLCNFSTKGRRKSKSSDGSDSCEENLSKKE 65
           MARLIRNASFLGRS+F HEGYRRGILG  T +CNFSTKG+RKSKSSDGSDSCEEN SKKE
Sbjct: 1   MARLIRNASFLGRSIFHHEGYRRGILGASTQICNFSTKGKRKSKSSDGSDSCEENASKKE 60

Query: 66  LALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLKH 125
           LALQQALDQITS+FGKGSIMWLGRS SSRHVPVVSTGSFALD+ALGIGGLPK        
Sbjct: 61  LALQQALDQITSSFGKGSIMWLGRSGSSRHVPVVSTGSFALDIALGIGGLPK-------- 120

Query: 126 FLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGYC 185
                                       GRVIEIYGPEASGKTTLALHVIAESQK+GGYC
Sbjct: 121 ----------------------------GRVIEIYGPEASGKTTLALHVIAESQKQGGYC 180

Query: 186 VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 245
           VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV
Sbjct: 181 VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 240

Query: 246 PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIYL 305
           PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQ                
Sbjct: 241 PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQ---------------- 300

Query: 306 VISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGE 365
                            RSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGE
Sbjct: 301 ----------------VRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGE 360

Query: 366 ETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG 425
           ETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICK SEIINLGLKYKFMSKAGA Y+FNG
Sbjct: 361 ETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKLSEIINLGLKYKFMSKAGAIYNFNG 420

Query: 426 RSFHGKDALKTFLSENEDAREELIMKLRDKLLDVEMGKPRNGDETEEGSLREDITTSPDS 485
           RSF GKDALKTFLSEN+DAREELI KLRD+LLDVEMGKPRNGDET EGSL+ED+TTSPDS
Sbjct: 421 RSFRGKDALKTFLSENDDAREELITKLRDQLLDVEMGKPRNGDET-EGSLQEDVTTSPDS 421

Query: 486 TEEDAVTAVE 496
           T+EDAVTAVE
Sbjct: 481 TDEDAVTAVE 421

[Close]

BLAST of Lsi11G001840 vs. NCBI nr
Match: XP_022154750.1 (DNA repair protein recA homolog 3, mitochondrial-like isoform X2 [Momordica charantia])

HSP 1 Score: 716.5 bits (1848), Expect = 1.8e-202
Identity = 394/490 (80.41%), Postives = 417/490 (85.10%), Query Frame = 0


Query: 6   MARLIRNASFLGRSLFQHEGYRRGILGTCTHLCNFSTKGRRKSKSSDGSDSCEENLSKKE 65
           MARLIR+ASF  RSLF HEG+RRGILGT T +C+FSTKGRRKSKSSDGSDSCEENLSKKE
Sbjct: 1   MARLIRSASFFRRSLFHHEGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKKE 60

Query: 66  LALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLKH 125
           LALQQALDQITSTFGKGSIMWLGRS +SRHVPVVSTGSFALD+ALG+GGLPK        
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPK-------- 120

Query: 126 FLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGYC 185
                                       GRVIEIYGPEASGKTTLALHVIAESQK+GGYC
Sbjct: 121 ----------------------------GRVIEIYGPEASGKTTLALHVIAESQKQGGYC 180

Query: 186 VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 245
           VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV
Sbjct: 181 VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 240

Query: 246 PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIYL 305
           PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFIN Q    + +  + + +L
Sbjct: 241 PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFIN-QVLFCVRLSRSILQFL 300

Query: 306 VISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGE 365
           + S S   L +  +   RSKLSTFGGFGGPTEVTCGGNALKFYAS+RLNIKRIGLVKKGE
Sbjct: 301 MQSSSGTALGNCMSLQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGE 360

Query: 366 ETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG 425
           ETLGSQVQVKVVKNKLAPPFR AQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG
Sbjct: 361 ETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG 420

Query: 426 RSFHGKDALKTFLSENEDAREELIMKLRDKLLDVEMGKPRNGDETEEGSLREDITTSPDS 485
           RSFHGKDALKTFL++N DAREELI KLRDKLLD++M K  NGDETEE S REDI  SPDS
Sbjct: 421 RSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEE-SAREDI-ISPDS 451

Query: 486 TEEDAVTAVE 496
           T+EDAVTAVE
Sbjct: 481 TDEDAVTAVE 451

[Close]

BLAST of Lsi11G001840 vs. NCBI nr
Match: XP_022154749.1 (DNA repair protein recA homolog 3, mitochondrial-like isoform X1 [Momordica charantia])

HSP 1 Score: 711.8 bits (1836), Expect = 4.3e-201
Identity = 394/491 (80.24%), Postives = 417/491 (84.93%), Query Frame = 0


Query: 6   MARLIRNASFLGRSLFQHE-GYRRGILGTCTHLCNFSTKGRRKSKSSDGSDSCEENLSKK 65
           MARLIR+ASF  RSLF HE G+RRGILGT T +C+FSTKGRRKSKSSDGSDSCEENLSKK
Sbjct: 1   MARLIRSASFFRRSLFHHEQGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKK 60

Query: 66  ELALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLK 125
           ELALQQALDQITSTFGKGSIMWLGRS +SRHVPVVSTGSFALD+ALG+GGLPK       
Sbjct: 61  ELALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPK------- 120

Query: 126 HFLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGY 185
                                        GRVIEIYGPEASGKTTLALHVIAESQK+GGY
Sbjct: 121 -----------------------------GRVIEIYGPEASGKTTLALHVIAESQKQGGY 180

Query: 186 CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAAL 245
           CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAAL
Sbjct: 181 CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAAL 240

Query: 246 VPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIY 305
           VPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFIN Q    + +  + + +
Sbjct: 241 VPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFIN-QVLFCVRLSRSILQF 300

Query: 306 LVISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKG 365
           L+ S S   L +  +   RSKLSTFGGFGGPTEVTCGGNALKFYAS+RLNIKRIGLVKKG
Sbjct: 301 LMQSSSGTALGNCMSLQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKG 360

Query: 366 EETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFN 425
           EETLGSQVQVKVVKNKLAPPFR AQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFN
Sbjct: 361 EETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFN 420

Query: 426 GRSFHGKDALKTFLSENEDAREELIMKLRDKLLDVEMGKPRNGDETEEGSLREDITTSPD 485
           GRSFHGKDALKTFL++N DAREELI KLRDKLLD++M K  NGDETEE S REDI  SPD
Sbjct: 421 GRSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEE-SAREDI-ISPD 452

Query: 486 STEEDAVTAVE 496
           ST+EDAVTAVE
Sbjct: 481 STDEDAVTAVE 452

[Close]

BLAST of Lsi11G001840 vs. NCBI nr
Match: XP_022154752.1 (DNA repair protein recA homolog 3, mitochondrial-like isoform X4 [Momordica charantia])

HSP 1 Score: 710.3 bits (1832), Expect = 1.3e-200
Identity = 390/490 (79.59%), Postives = 405/490 (82.65%), Query Frame = 0


Query: 6   MARLIRNASFLGRSLFQHEGYRRGILGTCTHLCNFSTKGRRKSKSSDGSDSCEENLSKKE 65
           MARLIR+ASF  RSLF HEG+RRGILGT T +C+FSTKGRRKSKSSDGSDSCEENLSKKE
Sbjct: 1   MARLIRSASFFRRSLFHHEGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKKE 60

Query: 66  LALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLKH 125
           LALQQALDQITSTFGKGSIMWLGRS +SRHVPVVSTGSFALD+ALG+GGLPK        
Sbjct: 61  LALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPK-------- 120

Query: 126 FLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGYC 185
                                       GRVIEIYGPEASGKTTLALHVIAESQK+GGYC
Sbjct: 121 ----------------------------GRVIEIYGPEASGKTTLALHVIAESQKQGGYC 180

Query: 186 VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 245
           VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV
Sbjct: 181 VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 240

Query: 246 PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIYL 305
           PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFINQ                
Sbjct: 241 PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ---------------- 300

Query: 306 VISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGE 365
                            RSKLSTFGGFGGPTEVTCGGNALKFYAS+RLNIKRIGLVKKGE
Sbjct: 301 ----------------VRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKGE 360

Query: 366 ETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG 425
           ETLGSQVQVKVVKNKLAPPFR AQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG
Sbjct: 361 ETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG 420

Query: 426 RSFHGKDALKTFLSENEDAREELIMKLRDKLLDVEMGKPRNGDETEEGSLREDITTSPDS 485
           RSFHGKDALKTFL++N DAREELI KLRDKLLD++M K  NGDETEE S REDI  SPDS
Sbjct: 421 RSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEE-SAREDI-ISPDS 420

Query: 486 TEEDAVTAVE 496
           T+EDAVTAVE
Sbjct: 481 TDEDAVTAVE 420

[Close]

BLAST of Lsi11G001840 vs. NCBI nr
Match: XP_022154751.1 (DNA repair protein recA homolog 3, mitochondrial-like isoform X3 [Momordica charantia])

HSP 1 Score: 705.7 bits (1820), Expect = 3.1e-199
Identity = 390/491 (79.43%), Postives = 405/491 (82.48%), Query Frame = 0


Query: 6   MARLIRNASFLGRSLFQHE-GYRRGILGTCTHLCNFSTKGRRKSKSSDGSDSCEENLSKK 65
           MARLIR+ASF  RSLF HE G+RRGILGT T +C+FSTKGRRKSKSSDGSDSCEENLSKK
Sbjct: 1   MARLIRSASFFRRSLFHHEQGFRRGILGTSTQICSFSTKGRRKSKSSDGSDSCEENLSKK 60

Query: 66  ELALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLK 125
           ELALQQALDQITSTFGKGSIMWLGRS +SRHVPVVSTGSFALD+ALG+GGLPK       
Sbjct: 61  ELALQQALDQITSTFGKGSIMWLGRSVASRHVPVVSTGSFALDIALGVGGLPK------- 120

Query: 126 HFLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGY 185
                                        GRVIEIYGPEASGKTTLALHVIAESQK+GGY
Sbjct: 121 -----------------------------GRVIEIYGPEASGKTTLALHVIAESQKQGGY 180

Query: 186 CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAAL 245
           CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAAL
Sbjct: 181 CVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAAL 240

Query: 246 VPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIY 305
           VPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFINQ               
Sbjct: 241 VPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQ--------------- 300

Query: 306 LVISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKG 365
                             RSKLSTFGGFGGPTEVTCGGNALKFYAS+RLNIKRIGLVKKG
Sbjct: 301 -----------------VRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLVKKG 360

Query: 366 EETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFN 425
           EETLGSQVQVKVVKNKLAPPFR AQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFN
Sbjct: 361 EETLGSQVQVKVVKNKLAPPFRTAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFN 420

Query: 426 GRSFHGKDALKTFLSENEDAREELIMKLRDKLLDVEMGKPRNGDETEEGSLREDITTSPD 485
           GRSFHGKDALKTFL++N DAREELI KLRDKLLD++M K  NGDETEE S REDI  SPD
Sbjct: 421 GRSFHGKDALKTFLAQNGDAREELITKLRDKLLDMDMDKRGNGDETEE-SAREDI-ISPD 421

Query: 486 STEEDAVTAVE 496
           ST+EDAVTAVE
Sbjct: 481 STDEDAVTAVE 421

[Close]

BLAST of Lsi11G001840 vs. TAIR 10
Match: AT2G19490.1 (recA DNA recombination family protein )

HSP 1 Score: 563.1 bits (1450), Expect = 2.3e-160
Identity = 314/490 (64.08%), Postives = 363/490 (74.08%), Query Frame = 0


Query: 6   MARLIRNASFLGRSLFQHEGYRRGILGTCTHLCNFSTKGRRKSKSSDGSDSCEENLSKKE 65
           MAR++RN   L  SLF  E  RR ++GT   L  F+ K ++KSK SDG+ S EE +SKKE
Sbjct: 1   MARILRNVYSLRSSLFSSELLRRSVVGTSFQLRGFAAKAKKKSK-SDGNGSSEEGMSKKE 60

Query: 66  LALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLKH 125
           +ALQQALDQITS+FGKGSIM+LGR+ S R+VPV STGSFALDVALG+GGLPK        
Sbjct: 61  IALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPK-------- 120

Query: 126 FLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGYC 185
                                       GRV+EIYGPEASGKTTLALHVIAE+QK+GG C
Sbjct: 121 ----------------------------GRVVEIYGPEASGKTTLALHVIAEAQKQGGTC 180

Query: 186 VFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALV 245
           VFVDAEHALD +LA+AIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDV+VVDSVAALV
Sbjct: 181 VFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALV 240

Query: 246 PKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIYL 305
           PKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFINQ                
Sbjct: 241 PKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTLLIFINQ---------------- 300

Query: 306 VISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGE 365
                            RSKLSTFGGFGGPTEVTCGGNALKFYAS+RLNIKRIGL+KKGE
Sbjct: 301 ----------------VRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIKKGE 360

Query: 366 ETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKAGAFYSFNG 425
           ET GSQV VK+VKNKLAPPFR AQFELEFGKGICK +EII+L +K+KF++K G FY+ NG
Sbjct: 361 ETTGSQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNG 419

Query: 426 RSFHGKDALKTFLSENEDAREELIMKLRDKLL-DVEMGKPRNGDETEEGSLREDITTSPD 485
           +++HGK+ALK FL +NE  +EEL+ KL+DKL+ D    K    +  EE SLR  +  SPD
Sbjct: 421 KNYHGKEALKRFLKQNESDQEELMKKLQDKLIADEAADKETESESEEEDSLR--VVVSPD 419

Query: 486 STEEDAVTAV 495
           +T++++   V
Sbjct: 481 NTDDESPALV 419

[Close]

BLAST of Lsi11G001840 vs. TAIR 10
Match: AT3G10140.1 (RECA homolog 3 )

HSP 1 Score: 277.3 bits (708), Expect = 2.5e-74
Identity = 160/399 (40.10%), Postives = 232/399 (58.15%), Query Frame = 0


Query: 58  EENLSKKELALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIGGLPK 117
           +  +++K+ AL  AL Q++  F K S + L R    R V V+STGS  LD+ALG+GGLPK
Sbjct: 56  DRKVAEKDTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPK 115

Query: 118 DDFVRLKHFLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALHVIAE 177
                                               GR++E+YG EASGKTTLALH+I E
Sbjct: 116 ------------------------------------GRMVEVYGKEASGKTTLALHIIKE 175

Query: 178 SQKEGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVV 237
           +QK GGYC ++DAE+A+DP+LA++IGVNTE LL+S+P   E+ L++VD L +SGSVDV+V
Sbjct: 176 AQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTKSGSVDVIV 235

Query: 238 VDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTVIIHV 297
           VDSVAAL P+ ELD  +G+ +   Q+R+M+QALRK+ +S+  SQT+++F+NQ        
Sbjct: 236 VDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQ-------- 295

Query: 298 VMASIIYLVISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKR 357
                                    RS + +   F    EVTCGGNAL F+A++RL + R
Sbjct: 296 ------------------------VRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIR 355

Query: 358 IGLVKKGEETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKYKFMSKA 417
            GL+K   +  G  V V+VVKNKLAP  + ++  + FG G   E E++ L  ++  + + 
Sbjct: 356 TGLIKTANKISGLNVCVQVVKNKLAPGKKKSELGIHFGHGFYVEREVLELACEHGVILRE 386

Query: 418 GAFYSFNGRSFHGKDALKTFLSENEDAREELIMKLRDKL 457
           G  Y   G    GKDA + +L EN++A + ++  LR++L
Sbjct: 416 GTSYFIEGEVIEGKDAAEKYLVENKEALDTVVAILRNQL 386

[Close]

BLAST of Lsi11G001840 vs. TAIR 10
Match: AT3G32920.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 257.3 bits (656), Expect = 2.7e-68
Identity = 158/282 (56.03%), Postives = 178/282 (63.12%), Query Frame = 0


Query: 85  MWLGRSSSSRHVPVVSTGSFALDVALGIGGLPKDDFVRLKHFLNHIFSNLYFFCLIVLEA 144
           M+L R+ S R+VPV STGSFALDVALG+GGLPK                           
Sbjct: 1   MYLSRAVSPRNVPVFSTGSFALDVALGVGGLPK--------------------------- 60

Query: 145 FMKLLSSKHGRVIEIYGPEASGKTTLALHVIAESQKEGGYCVFVDAEHALDPALAQAIGV 204
                    GR++EIYGPEASGKT LALH+++                 L  +LA+AIGV
Sbjct: 61  ---------GRLVEIYGPEASGKTALALHMLS---------------MLLIRSLAKAIGV 120

Query: 205 NTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQAR 264
           NTENLLLSQPDCG+QALSLVDTLI+SGSVDV+VVDSVAALVPKGELDGEMGDAHMA+QAR
Sbjct: 121 NTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDSVAALVPKGELDGEMGDAHMAIQAR 180

Query: 265 LMSQALRKLSHSLSLSQTVLIFINQQYTVIIHVVMASIIYLVISFSSVVLHSLYAYVSRS 324
           LMSQALRK SHSL LSQT+LIFINQ                                 R 
Sbjct: 181 LMSQALRKFSHSLLLSQTLLIFINQ--------------------------------VRE 193

Query: 325 KLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEE 367
           +      FGGPTEVT GGNALKFYA +RL+IKRIGL+KKGEE
Sbjct: 241 R------FGGPTEVTSGGNALKFYAPMRLDIKRIGLIKKGEE 193

[Close]

BLAST of Lsi11G001840 vs. TAIR 10
Match: AT1G79050.1 (recA DNA recombination family protein )

HSP 1 Score: 249.2 bits (635), Expect = 7.4e-66
Identity = 166/430 (38.60%), Postives = 240/430 (55.81%), Query Frame = 0


Query: 54  SDSCEENLSKKELALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIG 113
           S   +     ++ AL+ A++ I S+FGKGS+  LG S+    V   S+G   LD+ALG G
Sbjct: 73  SPDADSRFLDRQKALEAAMNDINSSFGKGSVTRLG-SAGGALVETFSSGILTLDLALG-G 132

Query: 114 GLPKDDFVRLKHFLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALH 173
           GLPK                                    GRV+EIYGPE+SGKTTLALH
Sbjct: 133 GLPK------------------------------------GRVVEIYGPESSGKTTLALH 192

Query: 174 VIAESQKEGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSV 233
            IAE QK GG  + VDAEHA DPA ++A+GV+ ENL++ QPD GE AL   D + RSG+V
Sbjct: 193 AIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALETADRMCRSGAV 252

Query: 234 DVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTV 293
           D++ VDSV+AL P+ E++GE+G   M +QARLMSQALRK+S + S +   LIF+NQ    
Sbjct: 253 DLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQ---- 312

Query: 294 IIHVVMASIIYLVISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRL 353
                                        R K+  +  +G P EVT GG ALKF+ASVRL
Sbjct: 313 ----------------------------IRYKIGVY--YGNP-EVTSGGIALKFFASVRL 372

Query: 354 NIKRIGLVK--KGEETLGSQVQVKVVKNKLAPPFRIAQFELEFGKGICKESEIINLGLKY 413
            I+  G +K  KG+E +G + +V+V K+K++ P++ A+FE+ FG+G+ K   +++     
Sbjct: 373 EIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIM 429

Query: 414 KFMSKAGAFYSF-NGRSFHGKDALKTFLSENEDAREELIMKLRDKLLDVEMGK--PRNGD 473
           + + K G++YS+ + R   G++     L EN   ++E+  K+R  +LD E+ +  P    
Sbjct: 433 EVVVKKGSWYSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPLMSS 429

Query: 474 ETEEGSLRED 479
            +   S RE+
Sbjct: 493 SSSSASHREE 429

[Close]

BLAST of Lsi11G001840 vs. TAIR 10
Match: AT1G79050.2 (recA DNA recombination family protein )

HSP 1 Score: 219.2 bits (557), Expect = 8.2e-57
Identity = 140/335 (41.79%), Postives = 190/335 (56.72%), Query Frame = 0


Query: 54  SDSCEENLSKKELALQQALDQITSTFGKGSIMWLGRSSSSRHVPVVSTGSFALDVALGIG 113
           S   +     ++ AL+ A++ I S+FGKGS+  LG S+    V   S+G   LD+ALG G
Sbjct: 73  SPDADSRFLDRQKALEAAMNDINSSFGKGSVTRLG-SAGGALVETFSSGILTLDLALG-G 132

Query: 114 GLPKDDFVRLKHFLNHIFSNLYFFCLIVLEAFMKLLSSKHGRVIEIYGPEASGKTTLALH 173
           GLPK                                    GRV+EIYGPE+SGKTTLALH
Sbjct: 133 GLPK------------------------------------GRVVEIYGPESSGKTTLALH 192

Query: 174 VIAESQKEGGYCVFVDAEHALDPALAQAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSV 233
            IAE QK GG  + VDAEHA DPA ++A+GV+ ENL++ QPD GE AL   D + RSG+V
Sbjct: 193 AIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALETADRMCRSGAV 252

Query: 234 DVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTVLIFINQQYTV 293
           D++ VDSV+AL P+ E++GE+G   M +QARLMSQALRK+S + S +   LIF+NQ    
Sbjct: 253 DLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQ---- 312

Query: 294 IIHVVMASIIYLVISFSSVVLHSLYAYVSRSKLSTFGGFGGPTEVTCGGNALKFYASVRL 353
                                        R K+  +  +G P EVT GG ALKF+ASVRL
Sbjct: 313 ----------------------------IRYKIGVY--YGNP-EVTSGGIALKFFASVRL 334

Query: 354 NIKRIGLVK--KGEETLGSQVQVKVVKNKLAPPFR 387
            I+  G +K  KG+E +G + +V+V K+K++ P++
Sbjct: 373 EIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYK 334

The following BLAST results are available for this feature:

BLAST of Lsi11G001840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUP2	3.3e-159	64.08	DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q31F89	2.4e-93	47.80	Protein RecA OS=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2) OX=317025 ...	[more]
B8GQV3	3.4e-92	47.71	Protein RecA OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=re...	[more]
O32377	4.5e-92	49.13	Protein RecA OS=Allochromatium vinosum OX=1049 GN=recA PE=3 SV=1	[more]
Q5X4B5	7.6e-92	47.65	Protein RecA OS=Legionella pneumophila (strain Paris) OX=297246 GN=recA PE=3 SV=...	[more]

BLAST of Lsi11G001840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKI3	8.5e-203	80.41	DNA repair protein recA homolog 3, mitochondrial-like isoform X2 OS=Momordica ch...	[more]
A0A6J1DN29	2.1e-201	80.24	DNA repair protein recA homolog 3, mitochondrial-like isoform X1 OS=Momordica ch...	[more]
A0A6J1DMJ4	6.1e-201	79.59	DNA repair protein recA homolog 3, mitochondrial-like isoform X4 OS=Momordica ch...	[more]
A0A6J1DPM9	1.5e-199	79.43	DNA repair protein recA homolog 3, mitochondrial-like isoform X3 OS=Momordica ch...	[more]
A0A6J1KB04	1.4e-192	76.12	DNA repair protein recA homolog 3, mitochondrial OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Lsi11G001840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890910.1	4.0e-207	81.22	DNA repair protein recA homolog 3, mitochondrial [Benincasa hispida]	[more]
XP_022154750.1	1.8e-202	80.41	DNA repair protein recA homolog 3, mitochondrial-like isoform X2 [Momordica char...	[more]
XP_022154749.1	4.3e-201	80.24	DNA repair protein recA homolog 3, mitochondrial-like isoform X1 [Momordica char...	[more]
XP_022154752.1	1.3e-200	79.59	DNA repair protein recA homolog 3, mitochondrial-like isoform X4 [Momordica char...	[more]
XP_022154751.1	3.1e-199	79.43	DNA repair protein recA homolog 3, mitochondrial-like isoform X3 [Momordica char...	[more]

BLAST of Lsi11G001840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19490.1	2.3e-160	64.08	recA DNA recombination family protein	[more]
AT3G10140.1	2.5e-74	40.10	RECA homolog 3	[more]
AT3G32920.1	2.7e-68	56.03	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G79050.1	7.4e-66	38.60	recA DNA recombination family protein	[more]
AT1G79050.2	8.2e-57	41.79	recA DNA recombination family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 54..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 461..483
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 461..489
None	No IPR available	PANTHER	PTHR45900:SF9	REPAIR PROTEIN RECA, PUTATIVE-RELATED	coord: 6..122 coord: 152..291
None	No IPR available	PANTHER	PTHR45900:SF9	REPAIR PROTEIN RECA, PUTATIVE-RELATED	coord: 309..486
IPR013765	DNA recombination and repair protein RecA	PRINTS	PR00142	RECA	coord: 341..369 score: 62.01 coord: 223..252 score: 63.3 coord: 261..290 score: 60.45 coord: 427..444 score: 28.6 coord: 374..403 score: 56.44 coord: 189..218 score: 65.89
IPR013765	DNA recombination and repair protein RecA	PFAM	PF00154	RecA	coord: 152..291 e-value: 7.2E-68 score: 228.9 coord: 67..121 e-value: 4.2E-13 score: 49.4 coord: 333..398 e-value: 3.0E-22 score: 79.4
IPR013765	DNA recombination and repair protein RecA	PANTHER	PTHR45900	RECA	coord: 6..122 coord: 152..291
IPR013765	DNA recombination and repair protein RecA	PANTHER	PTHR45900	RECA	coord: 309..486
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 153..308 e-value: 6.3E-7 score: 39.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 315..458 e-value: 9.7E-29 score: 102.5 coord: 145..314 e-value: 3.6E-64 score: 218.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 153..398
IPR020584	DNA recombination/repair protein RecA, conserved site	PROSITE	PS00321	RECA_1	coord: 344..352
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 332..403 score: 26.366379
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 95..290 score: 26.3291
IPR023400	DNA recombination and repair protein RecA, C-terminal	SUPERFAMILY	54752	RecA protein, C-terminal domain	coord: 400..454

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G001840.1	Lsi11G001840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding