Lsi11G000840 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTGTGAAAAAGAAGTAGGAAATGAAAGGTACACAATAATAATAAGTGGAGTGAGCAAAGGATTAGGAAGAGCTTTAGCATTGGAGTTTGCAAAGCTTGGGCATATCATTGTTGGTTGTTCTCGCAACCAAACCAAATTGGATTCTCTACAACATGAGCTTTCTACCATTTCTTCACTTAATCATTTGCTCCTCAATCTTGATGTGGTATGTAATTCCTCACCGTTCTTATATATGTTTGAAATTCCCATCATTTAGCTTTCGTTTCGTAATTATTTAGTTTTTATTTATTTTTAATTTTTAAAAATTATGTTTATTTTCTGACCTTTTCTTACTTGTATTTTTTCATATTTCTTATTTTAAGATTTGAATTCTTAACCAATTTCTAAAAATAAAAACAAGTTTTTGAAAACTACTATTTTTTAATGAGAAAAAAATACATTTTTGGTCCATGAATTTTGAAAATATGTGTATTTAGTCTCTAATATTTTGAATTTATCATTTTAGTTCTTCTGTTTTTTAAGAATCGATTTAAAAGGTCCCTCTACTCAGAGAATTATTAATTTTTTTTTTCAAAAAAATGATAGATGGGTTTGGCATATCAAAATATTTTTTTTAATCCCTTGTAAAAAAAACATTTTGCAGTCTAAAATTGGGGTCATTTTATTTTCAATTCAACACTAGAAAAGAAGAAGAGAAAATGTTCTATAGAAATTTGGCGTTTGCCCATTTAGCTTCCTCCTCCATAACCATGACACATTTTTCAATAGAGATGGAGGAGAGAGAACAAGAGATGTGAGAGAAAGTGAAAAAAAAAAAGAGAAAATTAATAAAATAAATATTTTTTCCATTTAATAGTTCTTTTAGTACTGAGACATTTCAAACTTAATCTTGAAAATTCAAGGACAATTTTTTTTTTTTAATTTAAAATATTGACTTTAATTTTGAAAACACTCACAAAAGGTAAGAAATAAAATATAAAAATTAACTGATGAAAGTAGTATTTATAGACTTAATTTTTAAAAGCAAAAAAAATCAAAAATCCAATTGTTACCTAACAGGGCCTTAAATATAAATTTAAATACTACTTTGGTCTTTCTACTTTTAGTTTTATTTCATTTTGGTCTTTGTAATTTTTTAAAATATACATTTTTATTCATATGCTTTCAACTTTTTTTTTTATATTCGTGAGTGTCCGCATCGCTTAACTTTATTTCATTTTAGTCCTTGTACTTTTAAAAAGTGATCATTTTAATCTCTTGTAAAAGAAAATGAATTGACCAAAATGGTCAAAGTTTAGAAATACGATGACTAAAATGCACATTTGAAAGTATAAAGATAAAAATGAACCAAAATTGAAAAGAAAAGAAAATTTAAATTAGGGTTGTTTTCAAATACAACAAAATGTACCAAAATATTTACAAATATAGTAAAATGTCATATGTTGATTAGTGATAGACACTTATAGACTTCTATTATCTATTACTGATAGACACTAATATCTATCATTGATAAACTGTGACATTTTGTTATATTTATAAATATTTTGAGCACTTTTATCATTTAAAATAATTTCCCATTAAATTATCCTGTTGTTTTGTAGAGCTCAAATGATAGCGTGAAAGAGATGGCAGAAATTGTGTTACACAAAATGGGCTCTCCTCATATTATAGGTAATTAATGTATGATTTGATTTATAATTTTTTTTTTTTTTTTTTTTTTTAGCCTCAATGAATCAAATAGTGACATCATTTTATTGTATTTTTATTTGTATATAGTAAATAATGCAGCTTTGATTAATGAAAACGTGAAGATGTGGGAAGGTTGTGTTAAAGAGTTTGATGCTGTGATTGACACAAATATAAAAGGAACAGCAAATGTGTTACGTCATTTCATACCTCTCATGATTTCTAACAATAATCAAGGCATTATTGTTAATATGTCTTCCATTTATGGAAGAACTGAAGGTCCTCTGGTATGTAAAACCTTTAATTTCCTCTATATTTAACACAATTTCACTTACTTTAATTTTCAAATATAAATTTAAGAAGATTCAAAATCAATTAGAAGTATGTAGGTTTGTTGATATTTTATTATAAATTAAAAAGATTCTGCTTTAATTCTTGAGTTTTGAGAAATTGACTTAAAAGCCCATATATTAGTATAGAATTGGTTTTTTTCCTCGTCCGCCATGGTACATGCATGCCTTCTTCTTTTACCGACATTAAACATCTAATTTATTCTAGTGTTATTTTTAAAAGTTGTCATGATACCTTAAGATTTGGTATTAGAGCTTTACTTTGCTTGTCGCATCTCACCCACTTTTCTTTTATTTGATATGAAAATTCACCGCATAAGGTTCACTAAGTTTTGTTTATTGAGGATCTCACAAACACAACTAATTAAGTTCAATCATGGGCTTTGATATCAATTGATAAAGACATCAGGATATAACTCTGCCAATAATATTGTCTACTTTGGACATAAGAGCGCCTTGTATGACTTTTTCTTTTAGAATTACCTAAAAGGTCTTTGATCATGTGTTGCACAACTGCACACGTCAATTTATAATATAGTACGTTTGAAATGGTCTTGATCGAGTATTGTCCTCGAGGAATCAATTTGATATACTTTTAACTATTTAGAGATCGTTCTAATTTTATTTAAGGGTCCAACTTTAATGCAAATTAATCTAACACTAAACGAAGAAAACAATTAAACTAATCAAGCATGAAGATTTTCAACAAAGAGACGTTTTAGGGTGTAGATGTCATCAATAGATCTACTAAACTCTTGAACCAATTATCACAAAACCTAGATCTAAAAGTCACTTTTATCCGGATTACTCCTTTCGAGGTCAATATTTTCTTTCACCTAATTACTAATTCTTAATCTCTTGAAACTAGTCAATTAAGCAAAGCATTAGAACCCTTCATCAACAATCTCTATTAATTGTTATCCTATTATGTGGCATGCATGATCGAATCTACACACCTTCTTGTTACAATATTTATCCCTTTCGACTTGGGCTACCCATAAATTTTGGGTTTTGTCTAGGACAACCCTCAACAAAGAGGAGAAAAGAGTAACAAAATTTCAAGGCAATTCATTGCTTATGAGAAAGTACTTTTGTGAAACTCGTAATGGAACAAAGCTTATGAGTAAAATTCTCTCGTCTAATTTTGAAGACATCCAGTTGACAAATATTTTGTGTGTATATTGAAATGATTGTATTTTGTAGGTTTCAGCATATTGTAGCTCAAAATGGGCTATTGAAGGGTTAAGCAAAACATTAGCAAAAGAGGTACCAAATGGAATAACAATTGTGGCATTAGATCCTGGGATTATAAATACAGATATGCTTGCTTGTCATATTGGAGATCATTCAGCTTCTCATTATCAAACTCCTCAAAAATGGTATCATCCTCTACTAATTTACTTCCATACTTCCATAAAAAGGGTGGTTTTTAAATATAGCAAAATGAGCCAAAATATTTATAAATATAGCAAAATGTTACCGTCTATCAGTAATAGACACTAATAGACTACTATCATCTATCATTGTCTATCATGATATAGATACTGATATCATGATCTATCAGTATCTATCACTTTTTATCACGAATAAACAATGATATTTTTCCATTTTTAACAAATTTGTCATTTATAACAATTACTCAAATAAAAAGTCTTTCATTGAGTAATATTGTTTGGATGTTGGGTTTTTTTATGGTTTATTGAAAACTTTCTTGCTTTATATTTATGGAAGGATATTGTGTTATCACTTAAGCTTGTGATTTAATGGAAAACTATAGTTTAAAGATTTAAATTCCCTAAAAAAAATATGGTACTACGAGACGAGTTTCTCTTGGAATATGATAGCGTACTTTTTGCTTTAAGTTATTTCTTTCAGAGGGAAAATATCTTTTTGGTCTCTAGATTTTGAGCCTTTCATTTATGATCATAAGGATTTAAAAGTCTTATACTTAATATATATATATCTCTTAACTTATTTTCAACTTTATCCCTATATTTTAAAATGTTACGGGGACCAAATTGAAACAAAAGTCAAACATCAAGAGTATAATTCTAATATTTTGAAAGCAAGGAACTAATTAAATGAAATCAAACTCAAAACTTTAGGACTAAAAGTGTAACATTTTGAAAAATTAAATGAAAACTAGACCTAAAACTTAGAGATCAAAAAGGTACTTTCTCTTTTTTTATTATTTTTTATATGTTTTATTTTTGTACAATAAATAAATTTGAATGTTTTTATATCTAATAAATTCGGAGCACATGATTTTTGTACTTAACTAAAACAATGAAAGTATGATGTTACCTAATTTATTTTTTGACAACATAATTATTTTTTATTTTTTATTTTTTGGTTTGATTCTAGTAACTTCTAGTTTTTTGGTAAACTATTATTTATTTATCTTTTAGAACGGGTGGTGAATAATATTTTTTTTTAACAATATGTAGAGTTAGAGCATCGAACCTTCGATCTCGAGATTGATAATATTTGAACTATGCTCATGTTAACGGTTAATAACGATTTTGAGATTAAATTGAAAAAAAAAAAAAACAAACAAACAAAAGTATAACATTACTTTTGAAAAGACGTGTTTGGAAGAAACCAATCATTCTTATGCTTTCTAGACTTAAAATGATTTTAGAATAATGGATGGTATCTAAATAGAAAAACAAACGGTATATATTAAGAACAAATAAAGAATATACTCAAATCATCATGCTGTAATATATGATCTATAACTAATTGTGAACTTTGTTTTTATCATTCTTGAAACACATAGGCATATCACCATTAATTTTTATAAATTTTGTTTAGGGCTACCAAGGCAGCTTCTATGATTCTCAACCTTTCAAGTGTTGATAATGGTGCATCTCTCACTGTTGATGATCCTGGTATTCTAGTTAGGTGAATTATTATACTTTTATTAAAGATATTACTCAATGTACTATTTGAACCTTTCTCATCTTTTTTTTCTTGCATATGTTATGTCGCTTCTACTATTTTTATGTTACTATTGAACTATAAAGTGGAAAGTACTTTTATTACTATATTTTTACATTAAAA ATGGAGTACACAATAATAATAAGTGGAGTGAGCAAAGGATTAGGAAGAGCTTTAGCATTGGAGTTTGCAAAGCTTGGGCATATCATTGTTGGTTGTTCTCGCAACCAAACCAAATTGGATTCTCTACAACATGAGCTTTCTACCATTTCTTCACTTAATCATTTGCTCCTCAATCTTGATGTGAGATGGAGGAGAGAGAACAAGAGATGTGAGAGAAACCTCAATGAATCAAATATAAATAATGCAGCTTTGATTAATGAAAACGTGAAGATGTGGGAAGGTTGTGTTAAAGAGTTTGATGCTGTGATTGACACAAATATAAAAGGAACAGCAAATGTGTTACGTCATTTCATACCTCTCATGATTTCTAACAATAATCAAGGCATTATTGTTAATATGTCTTCCATTTATGGAAGAACTGAAGGTCCTCTGGTTTCAGCATATTGTAGCTCAAAATGGGCTATTGAAGGGTTAAGCAAAACATTAGCAAAAGAGAAAAACAAACGGGCTACCAAGGCAGCTTCTATGATTCTCAACCTTTCAAGTGTTGATAATGGTGCATCTCTCACTGTTGATGATCCTGGTATTCTAGTTAGGTGAATTATTATACTTTTATTAAAGATATTACTCAATGTACTATTTGAACCTTTCTCATCTTTTTTTTCTTGCATATGTTATGTCGCTTCTACTATTTTTATGTTACTATTGAACTATAAAGTGGAAAGTACTTTTATTACTATATTTTTACATTAAAA ATGGAGTACACAATAATAATAAGTGGAGTGAGCAAAGGATTAGGAAGAGCTTTAGCATTGGAGTTTGCAAAGCTTGGGCATATCATTGTTGGTTGTTCTCGCAACCAAACCAAATTGGATTCTCTACAACATGAGCTTTCTACCATTTCTTCACTTAATCATTTGCTCCTCAATCTTGATGTGAGATGGAGGAGAGAGAACAAGAGATGTGAGAGAAACCTCAATGAATCAAATATAAATAATGCAGCTTTGATTAATGAAAACGTGAAGATGTGGGAAGGTTGTGTTAAAGAGTTTGATGCTGTGATTGACACAAATATAAAAGGAACAGCAAATGTGTTACGTCATTTCATACCTCTCATGATTTCTAACAATAATCAAGGCATTATTGTTAATATGTCTTCCATTTATGGAAGAACTGAAGGTCCTCTGGTTTCAGCATATTGTAGCTCAAAATGGGCTATTGAAGGGTTAAGCAAAACATTAGCAAAAGAGAAAAACAAACGGGCTACCAAGGCAGCTTCTATGATTCTCAACCTTTCAAGTGTTGATAATGGTGCATCTCTCACTGTTGATGATCCTGGTATTCTAGTTAGGTGA MEYTIIISGVSKGLGRALALEFAKLGHIIVGCSRNQTKLDSLQHELSTISSLNHLLLNLDVRWRRENKRCERNLNESNINNAALINENVKMWEGCVKEFDAVIDTNIKGTANVLRHFIPLMISNNNQGIIVNMSSIYGRTEGPLVSAYCSSKWAIEGLSKTLAKEKNKRATKAASMILNLSSVDNGASLTVDDPGILVR Homology
BLAST of Lsi11G000840 vs. ExPASy Swiss-Prot
Match: Q9SY73 (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana OX=3702 GN=At1g10310 PE=1 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.0e-45 Identity = 111/227 (48.90%), Postives = 140/227 (61.67%), Query Frame = 0
BLAST of Lsi11G000840 vs. ExPASy Swiss-Prot
Match: Q9X248 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=fabG PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.2e-11 Identity = 55/170 (32.35%), Postives = 92/170 (54.12%), Query Frame = 0
BLAST of Lsi11G000840 vs. ExPASy Swiss-Prot
Match: Q5HPW0 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=fabG PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.7e-10 Identity = 49/176 (27.84%), Postives = 93/176 (52.84%), Query Frame = 0
BLAST of Lsi11G000840 vs. ExPASy Swiss-Prot
Match: Q8CPI3 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=fabG PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.7e-10 Identity = 49/176 (27.84%), Postives = 93/176 (52.84%), Query Frame = 0
BLAST of Lsi11G000840 vs. ExPASy Swiss-Prot
Match: Q5HGK2 (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain COL) OX=93062 GN=fabG PE=3 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 6.1e-10 Identity = 48/176 (27.27%), Postives = 94/176 (53.41%), Query Frame = 0
BLAST of Lsi11G000840 vs. ExPASy TrEMBL
Match: A0A0A0KLF6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G072680 PE=3 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 1.5e-64 Identity = 146/236 (61.86%), Postives = 162/236 (68.64%), Query Frame = 0
BLAST of Lsi11G000840 vs. ExPASy TrEMBL
Match: A0A6J1K2V1 (NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490157 PE=3 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 6.7e-52 Identity = 125/233 (53.65%), Postives = 150/233 (64.38%), Query Frame = 0
BLAST of Lsi11G000840 vs. ExPASy TrEMBL
Match: A0A6J1EQA5 (NADPH-dependent pterin aldehyde reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111436427 PE=3 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 8.7e-52 Identity = 124/232 (53.45%), Postives = 153/232 (65.95%), Query Frame = 0
BLAST of Lsi11G000840 vs. ExPASy TrEMBL
Match: A0A6J1JVV2 (NADPH-dependent pterin aldehyde reductase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490157 PE=3 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 1.1e-51 Identity = 124/231 (53.68%), Postives = 149/231 (64.50%), Query Frame = 0
BLAST of Lsi11G000840 vs. ExPASy TrEMBL
Match: A0A6J1K2X6 (NADPH-dependent pterin aldehyde reductase-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111490157 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 2.5e-51 Identity = 123/230 (53.48%), Postives = 149/230 (64.78%), Query Frame = 0
BLAST of Lsi11G000840 vs. NCBI nr
Match: XP_038891769.1 (NADPH-dependent pterin aldehyde reductase-like [Benincasa hispida]) HSP 1 Score: 270.8 bits (691), Expect = 9.5e-69 Identity = 152/234 (64.96%), Postives = 170/234 (72.65%), Query Frame = 0
BLAST of Lsi11G000840 vs. NCBI nr
Match: XP_004142298.1 (NADPH-dependent pterin aldehyde reductase [Cucumis sativus] >KGN50902.2 hypothetical protein Csa_018356 [Cucumis sativus]) HSP 1 Score: 255.8 bits (652), Expect = 3.2e-64 Identity = 146/236 (61.86%), Postives = 162/236 (68.64%), Query Frame = 0
BLAST of Lsi11G000840 vs. NCBI nr
Match: XP_022994439.1 (NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 213.8 bits (543), Expect = 1.4e-51 Identity = 125/233 (53.65%), Postives = 150/233 (64.38%), Query Frame = 0
BLAST of Lsi11G000840 vs. NCBI nr
Match: XP_022929964.1 (NADPH-dependent pterin aldehyde reductase-like [Cucurbita moschata]) HSP 1 Score: 213.4 bits (542), Expect = 1.8e-51 Identity = 124/232 (53.45%), Postives = 153/232 (65.95%), Query Frame = 0
BLAST of Lsi11G000840 vs. NCBI nr
Match: XP_022994447.1 (NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 213.0 bits (541), Expect = 2.3e-51 Identity = 124/231 (53.68%), Postives = 149/231 (64.50%), Query Frame = 0
BLAST of Lsi11G000840 vs. TAIR 10
Match: AT1G10310.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 183.7 bits (465), Expect = 1.4e-46 Identity = 111/227 (48.90%), Postives = 140/227 (61.67%), Query Frame = 0
BLAST of Lsi11G000840 vs. TAIR 10
Match: AT3G55290.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 62.8 bits (151), Expect = 3.7e-10 Identity = 48/171 (28.07%), Postives = 83/171 (48.54%), Query Frame = 0
BLAST of Lsi11G000840 vs. TAIR 10
Match: AT3G55290.2 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 62.8 bits (151), Expect = 3.7e-10 Identity = 48/171 (28.07%), Postives = 83/171 (48.54%), Query Frame = 0
BLAST of Lsi11G000840 vs. TAIR 10
Match: AT3G55310.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 6.2e-10 Identity = 50/172 (29.07%), Postives = 89/172 (51.74%), Query Frame = 0
BLAST of Lsi11G000840 vs. TAIR 10
Match: AT1G63380.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08 Identity = 44/172 (25.58%), Postives = 83/172 (48.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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