Lsi11G000600 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi11G000600
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr11: 691144 .. 693201 (+)
RNA-Seq Expression	Lsi11G000600
Synteny	Lsi11G000600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGGAATGGATTGGTTAAACATCTCAAGGGTGACCTTTTATTTCTTGATTCATCGCCTTTTTCCAAGCTCTTGAGCCAGTGTGTTCGCTCGAAGTCATCTAGAGACACAAGTCGTGTACATGCTTGCATAATTAAATCGCCTTTTGCATCCGAAACTTTTATCCAAAATAGGCTCATTGATGCATATGGGAAATGTCGATGTGTGGATGTTGCTCGCAAGTTGTTTGATAGATTGCTTGAGAGAAATATTTTCTCTTGGAACTCCATCATTTGTGCATTCACTAAGTCCGGATTTCTTGATGATGCTGTCCACATCTTTGAGAAGATGCCTCAAGTTGACCAATGCTCATGGAATTCTATGATTTCGGGTTTTGAACAACATGATCGCTTTGATGAAGCTTTAATTTATTTTGCTCAAATGCATGGTCATGGTTTTCTCATGAATGAATATTCATTCGGTAGTGCTCTAAGTGCTTGTGCAGGTTTACAAGATTTGAAATCAGGTTCCCAAATCCACAGTTTAATATATAGGTCAAATTATTTATCAGATGTGTATATGGGCTCTGCTCTAGTAGATATGTACTCTAAATGTGGAAGGGTTGACTATGCTCAAAGTGTTTTTGATGGAATGACTGTGAGAAGTAGAGTTTCTTGGAATAGCTTGATTACATGTTATGAACAGAATGGTCCAGTTGATGAGGCTCTTAAGATTTTTGTTGAGATGATCGAATGTGGGGTTGAACCTGACGAGGTAACTCTTGCTAGTGTTGTTAGTGCGTGTGCAACTATCTCCGCAATCAAAGAAGGTCAACAGATTCATGCTCGAGTTGTGAAATGTGATGAATTTAGAAATGATCTTATTTTAGGCAATGCGTTGCTTGATATGTATGCTAAATGTAATAGGATTAATGAGGCTAGAATAATTTTTGATATGATGCCAATTAGAAGTGTGGTGTCTGAAACCTCAATGGTAAGTGGGTATGCAAAAGCATCCAGAGTTAAAGTTGCAAGATATATGTTCTCAAATATGATGGTGAAAGATGTAATTACTTGGAATGCGCTTATTGCAGGGTGTACACAAAATGGAGAGAATGAAGAGGCACTTACACTCTTTCGTCTATTGAAAAGAGAGTCTGTTTGGCCTACACACTACACGTTTGGGAATCTCCTCAATGCTTGTGCAAACCTTGCTGATTTGCAGCTTGGCCGACAGGCTCATTCTCATGTTTTAAAGCATGGATTTCGATTCCAATATGGAGAAGAGTCAGATGTTTTTGTTGGCAATTCTCTAATAGATATGTATATGAAATGTGGATCAGTTGAGAATGGTTGTAGCGTGTTTGAACATATGTTGGAAAGGGATTGTGTCTCATGGAATGCTATGATAGTTGGATATGCACAAAATGGTTTTGGCAATAAGGCCCTTGAAGTCTTCAGTAAAATGTTAGAGTCAGGAGAGAAACCAGATCATGTAACAATGATCGGTGTTCTTTGCGCTTGTAGTCATGCCGGTCTGCTTGATGAAGGCCGCTATTACTTTCGATCAATGAGTGCACAGCATGGTTTGGTGCCATTAAAAGACCATTATACATGTATGGTTGATTTACTTGGCCGAGCTGGCTACCTTGAAGAAGCAAAAAATCTAATAGAGGAAATGTCAATGAAGCCCGATGCTATCGTCTGGGGATCCTTGCTTGCCGCTTGTAAAGTCCATCGGAACATCAAATTGGGGGAATATGTAGTGGAGAAGCTTTTAGAGGTAGATCCTGAGAATTCTGGGCCATATGTTCTTCTCTCTAATATGTATGCTGAACGTAGAGATTGGAAGAATGTTGTGAGGATAAGAAAACTGATGAGACAGAGAGGAGTGATTAAACAACCAGGTTGCAGTTGGATTGAAATTCAGGGTCAGTTGAATGTTTTTATGGTTAAAGATAAAAGGCATGTAAGGAAGAAAGAAATCTACATGCTTTTGATAACACTTTTGCAACAGATGAAACGAGCAGGATATGTCCCGCATGTTGAGAGTAATGAGATTGACGAAGAACAATAG

mRNA sequence

ATGGCTGGGAATGGATTGGTTAAACATCTCAAGGGTGACCTTTTATTTCTTGATTCATCGCCTTTTTCCAAGCTCTTGAGCCAGTGTGTTCGCTCGAAGTCATCTAGAGACACAAGTCGTGTACATGCTTGCATAATTAAATCGCCTTTTGCATCCGAAACTTTTATCCAAAATAGGCTCATTGATGCATATGGGAAATGTCGATGTGTGGATGTTGCTCGCAAGTTGTTTGATAGATTGCTTGAGAGAAATATTTTCTCTTGGAACTCCATCATTTGTGCATTCACTAAGTCCGGATTTCTTGATGATGCTGTCCACATCTTTGAGAAGATGCCTCAAGTTGACCAATGCTCATGGAATTCTATGATTTCGGGTTTTGAACAACATGATCGCTTTGATGAAGCTTTAATTTATTTTGCTCAAATGCATGGTCATGGTTTTCTCATGAATGAATATTCATTCGGTAGTGCTCTAAGTGCTTGTGCAGGTTTACAAGATTTGAAATCAGGTTCCCAAATCCACAGTTTAATATATAGGTCAAATTATTTATCAGATGTGTATATGGGCTCTGCTCTAGTAGATATGTACTCTAAATGTGGAAGGGTTGACTATGCTCAAAGTGTTTTTGATGGAATGACTGTGAGAAGTAGAGTTTCTTGGAATAGCTTGATTACATGTTATGAACAGAATGGTCCAGTTGATGAGGCTCTTAAGATTTTTGTTGAGATGATCGAATGTGGGGTTGAACCTGACGAGGTAACTCTTGCTAGTGTTGTTAGTGCGTGTGCAACTATCTCCGCAATCAAAGAAGGTCAACAGATTCATGCTCGAGTTGTGAAATGTGATGAATTTAGAAATGATCTTATTTTAGGCAATGCGTTGCTTGATATGTATGCTAAATGTAATAGGATTAATGAGGCTAGAATAATTTTTGATATGATGCCAATTAGAAGTGTGGTGTCTGAAACCTCAATGGTAAGTGGGTATGCAAAAGCATCCAGAGTTAAAGTTGCAAGATATATGTTCTCAAATATGATGGTGAAAGATGTAATTACTTGGAATGCGCTTATTGCAGGGTGTACACAAAATGGAGAGAATGAAGAGGCACTTACACTCTTTCGTCTATTGAAAAGAGAGTCTGTTTGGCCTACACACTACACGTTTGGGAATCTCCTCAATGCTTGTGCAAACCTTGCTGATTTGCAGCTTGGCCGACAGGCTCATTCTCATGTTTTAAAGCATGGATTTCGATTCCAATATGGAGAAGAGTCAGATGTTTTTGTTGGCAATTCTCTAATAGATATGTATATGAAATGTGGATCAGTTGAGAATGGTTGTAGCGTGTTTGAACATATGTTGGAAAGGGATTGTGTCTCATGGAATGCTATGATAGTTGGATATGCACAAAATGGTTTTGGCAATAAGGCCCTTGAAGTCTTCAGTAAAATGTTAGAGTCAGGAGAGAAACCAGATCATGTAACAATGATCGGTGTTCTTTGCGCTTGTAGTCATGCCGGTCTGCTTGATGAAGGCCGCTATTACTTTCGATCAATGAGTGCACAGCATGGTTTGGTGCCATTAAAAGACCATTATACATGTATGGTTGATTTACTTGGCCGAGCTGGCTACCTTGAAGAAGCAAAAAATCTAATAGAGGAAATGTCAATGAAGCCCGATGCTATCGTCTGGGGATCCTTGCTTGCCGCTTGTAAAGTCCATCGGAACATCAAATTGGGGGAATATGTAGTGGAGAAGCTTTTAGAGGTAGATCCTGAGAATTCTGGGCCATATGTTCTTCTCTCTAATATGTATGCTGAACGTAGAGATTGGAAGAATGTTGTGAGGATAAGAAAACTGATGAGACAGAGAGGAGTGATTAAACAACCAGGTTGCAGTTGGATTGAAATTCAGGGTCAGTTGAATGTTTTTATGGTTAAAGATAAAAGGCATGTAAGGAAGAAAGAAATCTACATGCTTTTGATAACACTTTTGCAACAGATGAAACGAGCAGGATATGTCCCGCATGTTGAGAGTAATGAGATTGACGAAGAACAATAG

Coding sequence (CDS)

ATGGCTGGGAATGGATTGGTTAAACATCTCAAGGGTGACCTTTTATTTCTTGATTCATCGCCTTTTTCCAAGCTCTTGAGCCAGTGTGTTCGCTCGAAGTCATCTAGAGACACAAGTCGTGTACATGCTTGCATAATTAAATCGCCTTTTGCATCCGAAACTTTTATCCAAAATAGGCTCATTGATGCATATGGGAAATGTCGATGTGTGGATGTTGCTCGCAAGTTGTTTGATAGATTGCTTGAGAGAAATATTTTCTCTTGGAACTCCATCATTTGTGCATTCACTAAGTCCGGATTTCTTGATGATGCTGTCCACATCTTTGAGAAGATGCCTCAAGTTGACCAATGCTCATGGAATTCTATGATTTCGGGTTTTGAACAACATGATCGCTTTGATGAAGCTTTAATTTATTTTGCTCAAATGCATGGTCATGGTTTTCTCATGAATGAATATTCATTCGGTAGTGCTCTAAGTGCTTGTGCAGGTTTACAAGATTTGAAATCAGGTTCCCAAATCCACAGTTTAATATATAGGTCAAATTATTTATCAGATGTGTATATGGGCTCTGCTCTAGTAGATATGTACTCTAAATGTGGAAGGGTTGACTATGCTCAAAGTGTTTTTGATGGAATGACTGTGAGAAGTAGAGTTTCTTGGAATAGCTTGATTACATGTTATGAACAGAATGGTCCAGTTGATGAGGCTCTTAAGATTTTTGTTGAGATGATCGAATGTGGGGTTGAACCTGACGAGGTAACTCTTGCTAGTGTTGTTAGTGCGTGTGCAACTATCTCCGCAATCAAAGAAGGTCAACAGATTCATGCTCGAGTTGTGAAATGTGATGAATTTAGAAATGATCTTATTTTAGGCAATGCGTTGCTTGATATGTATGCTAAATGTAATAGGATTAATGAGGCTAGAATAATTTTTGATATGATGCCAATTAGAAGTGTGGTGTCTGAAACCTCAATGGTAAGTGGGTATGCAAAAGCATCCAGAGTTAAAGTTGCAAGATATATGTTCTCAAATATGATGGTGAAAGATGTAATTACTTGGAATGCGCTTATTGCAGGGTGTACACAAAATGGAGAGAATGAAGAGGCACTTACACTCTTTCGTCTATTGAAAAGAGAGTCTGTTTGGCCTACACACTACACGTTTGGGAATCTCCTCAATGCTTGTGCAAACCTTGCTGATTTGCAGCTTGGCCGACAGGCTCATTCTCATGTTTTAAAGCATGGATTTCGATTCCAATATGGAGAAGAGTCAGATGTTTTTGTTGGCAATTCTCTAATAGATATGTATATGAAATGTGGATCAGTTGAGAATGGTTGTAGCGTGTTTGAACATATGTTGGAAAGGGATTGTGTCTCATGGAATGCTATGATAGTTGGATATGCACAAAATGGTTTTGGCAATAAGGCCCTTGAAGTCTTCAGTAAAATGTTAGAGTCAGGAGAGAAACCAGATCATGTAACAATGATCGGTGTTCTTTGCGCTTGTAGTCATGCCGGTCTGCTTGATGAAGGCCGCTATTACTTTCGATCAATGAGTGCACAGCATGGTTTGGTGCCATTAAAAGACCATTATACATGTATGGTTGATTTACTTGGCCGAGCTGGCTACCTTGAAGAAGCAAAAAATCTAATAGAGGAAATGTCAATGAAGCCCGATGCTATCGTCTGGGGATCCTTGCTTGCCGCTTGTAAAGTCCATCGGAACATCAAATTGGGGGAATATGTAGTGGAGAAGCTTTTAGAGGTAGATCCTGAGAATTCTGGGCCATATGTTCTTCTCTCTAATATGTATGCTGAACGTAGAGATTGGAAGAATGTTGTGAGGATAAGAAAACTGATGAGACAGAGAGGAGTGATTAAACAACCAGGTTGCAGTTGGATTGAAATTCAGGGTCAGTTGAATGTTTTTATGGTTAAAGATAAAAGGCATGTAAGGAAGAAAGAAATCTACATGCTTTTGATAACACTTTTGCAACAGATGAAACGAGCAGGATATGTCCCGCATGTTGAGAGTAATGAGATTGACGAAGAACAATAG

Protein sequence

MAGNGLVKHLKGDLLFLDSSPFSKLLSQCVRSKSSRDTSRVHACIIKSPFASETFIQNRLIDAYGKCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRSNYLSDVYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEESDVFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLLSNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLLITLLQQMKRAGYVPHVESNEIDEEQ

Homology

[Close]

BLAST of Lsi11G000600 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 928.3 bits (2398), Expect = 4.9e-269
Identity = 443/671 (66.02%), Postives = 543/671 (80.92%), Query Frame = 0


Query: 16  FLDSSPFSKLLSQCVRSKSSRDTSR-VHACIIKSPFASETFIQNRLIDAYGKCRCVDVAR 75
           F DSSPF+KLL  C++SK S    R VHA +IKS F++E FIQNRLIDAY KC  ++  R
Sbjct: 16  FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75

Query: 76  KLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHDRFDE 135
           ++FD++ +RNI++WNS++   TK GFLD+A  +F  MP+ DQC+WNSM+SGF QHDR +E
Sbjct: 76  QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135

Query: 136 ALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRSNYLSDVYMGSALVD 195
           AL YFA MH  GF++NEYSF S LSAC+GL D+  G Q+HSLI +S +LSDVY+GSALVD
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195

Query: 196 MYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIECGVEPDEVT 255
           MYSKCG V+ AQ VFD M  R+ VSWNSLITC+EQNGP  EAL +F  M+E  VEPDEVT
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255

Query: 256 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 315
           LASV+SACA++SAIK GQ++H RVVK D+ RND+IL NA +DMYAKC+RI EAR IFD M
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315

Query: 316 PIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALTLFR 375
           PIR+V++ETSM+SGYA A+  K AR MF+ M  ++V++WNALIAG TQNGENEEAL+LF 
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375

Query: 376 LLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEESDVFVGNSLID 435
           LLKRESV PTHY+F N+L ACA+LA+L LG QAH HVLKHGF+FQ GEE D+FVGNSLID
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435

Query: 436 MYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEKPDHVT 495
           MY+KCG VE G  VF  M+ERDCVSWNAMI+G+AQNG+GN+ALE+F +MLESGEKPDH+T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495

Query: 496 MIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGRAGYLEEAKNLIEEM 555
           MIGVL AC HAG ++EGR+YF SM+   G+ PL+DHYTCMVDLLGRAG+LEEAK++IEEM
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555

Query: 556 SMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLLSNMYAERRDWKNVV 615
            M+PD+++WGSLLAACKVHRNI LG+YV EKLLEV+P NSGPYVLLSNMYAE   W++V+
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615

Query: 616 RIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLLITLLQQMKRAGYVP 675
            +RK MR+ GV KQPGCSWI+IQG  +VFMVKDK H RKK+I+ LL  L+ +M+      
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE--QD 675

Query: 676 HVESNEIDEEQ 686
           H E   +  E+
Sbjct: 676 HTEIGSLSSEE 684

[Close]

BLAST of Lsi11G000600 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 8.2e-131
Identity = 250/700 (35.71%), Postives = 397/700 (56.71%), Query Frame = 0


Query: 23  SKLLSQCVRSKSSRDTSR-VHACIIKSPFASETFIQNRLIDAYGKCRCVDVARKLFDRLL 82
           + LL + V   + R T++ VH  +IKS      ++ N L++ Y K      ARKLFD + 
Sbjct: 17  TNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMP 76

Query: 83  ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHDRFDEALIYFAQ 142
            R  FSWN+++ A++K G +D     F+++PQ D  SW +MI G++   ++ +A+     
Sbjct: 77  LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136

Query: 143 MHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRSNYLSDVYMGSALVDMYSKCGR 202
           M   G    +++  + L++ A  + +++G ++HS I +     +V + ++L++MY+KCG 
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196

Query: 203 VDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIECGV------------- 262
              A+ VFD M VR   SWN++I  + Q G +D A+  F +M E  +             
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256

Query: 263 -------------------EPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLI 322
                               PD  TLASV+SACA +  +  G+QIH+ +V      + ++
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316

Query: 323 LGNALLDMYAKCNRINEARIIFDMMPIRSVVSE--TSMVSGYAKASRVKVARYMFSNMMV 382
           L NAL+ MY++C  +  AR + +    + +  E  T+++ GY K   +  A+ +F ++  
Sbjct: 317 L-NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 376

Query: 383 KDVITWNALIAGCTQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQA 442
           +DV+ W A+I G  Q+G   EA+ LFR +      P  YT   +L+  ++LA L  G+Q 
Sbjct: 377 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 436

Query: 443 HSHVLKHGFRFQYGEESDVFVGNSLIDMYMKCGSVENGCSVFEHM-LERDCVSWNAMIVG 502
           H   +K       GE   V V N+LI MY K G++ +    F+ +  ERD VSW +MI+ 
Sbjct: 437 HGSAVKS------GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIA 496

Query: 503 YAQNGFGNKALEVFSKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVP 562
            AQ+G   +ALE+F  ML  G +PDH+T +GV  AC+HAGL+++GR YF  M     ++P
Sbjct: 497 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIP 556

Query: 563 LKDHYTCMVDLLGRAGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKL 622
              HY CMVDL GRAG L+EA+  IE+M ++PD + WGSLL+AC+VH+NI LG+   E+L
Sbjct: 557 TLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERL 616

Query: 623 LEVDPENSGPYVLLSNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVK 682
           L ++PENSG Y  L+N+Y+    W+   +IRK M+   V K+ G SWIE++ +++VF V+
Sbjct: 617 LLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVE 676

Query: 683 DKRHVRKKEIYMLLITLLQQMKRAGYVPHVES--NEIDEE 685
           D  H  K EIYM +  +  ++K+ GYVP   S  ++++EE
Sbjct: 677 DGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEE 709

[Close]

BLAST of Lsi11G000600 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 7.2e-127
Identity = 245/630 (38.89%), Postives = 379/630 (60.16%), Query Frame = 0


Query: 58  NRLIDAYGKCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQC 117
           N +I  Y +    ++ARKLFD + ER++ SWN +I  + ++  L  A  +FE MP+ D C
Sbjct: 99  NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158

Query: 118 SWNSMISGFEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLI 177
           SWN+M+SG+ Q+   D+A   F +M       N+ S+ + LSA      ++       ++
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEA----CML 218

Query: 178 YRSNYLSDVYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEAL 237
           ++S     +   + L+  + K  ++  A+  FD M VR  VSWN++IT Y Q+G +DEA 
Sbjct: 219 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEAR 278

Query: 238 KIFVEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDM 297
           ++F E        D  T  ++VS       ++E +++  ++ + +E     +  NA+L  
Sbjct: 279 QLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE-----VSWNAMLAG 338

Query: 298 YAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALI 357
           Y +  R+  A+ +FD+MP R+V +  +M++GYA+  ++  A+ +F  M  +D ++W A+I
Sbjct: 339 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 398

Query: 358 AGCTQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFR 417
           AG +Q+G + EAL LF  ++RE       +F + L+ CA++  L+LG+Q H  ++K G+ 
Sbjct: 399 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY- 458

Query: 418 FQYGEESDVFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKAL 477
                E+  FVGN+L+ MY KCGS+E    +F+ M  +D VSWN MI GY+++GFG  AL
Sbjct: 459 -----ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 518

Query: 478 EVFSKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDL 537
             F  M   G KPD  TM+ VL ACSH GL+D+GR YF +M+  +G++P   HY CMVDL
Sbjct: 519 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 578

Query: 538 LGRAGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPY 597
           LGRAG LE+A NL++ M  +PDA +WG+LL A +VH N +L E   +K+  ++PENSG Y
Sbjct: 579 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 638

Query: 598 VLLSNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIY 657
           VLLSN+YA    W +V ++R  MR +GV K PG SWIEIQ + + F V D+ H  K EI+
Sbjct: 639 VLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIF 698

Query: 658 MLLITLLQQMKRAGYV--PHVESNEIDEEQ 686
             L  L  +MK+AGYV    V  ++++EE+
Sbjct: 699 AFLEELDLRMKKAGYVSKTSVVLHDVEEEE 705

[Close]

BLAST of Lsi11G000600 vs. ExPASy Swiss-Prot
Match: Q9FRI5 (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H74 PE=2 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.8e-125
Identity = 254/703 (36.13%), Postives = 391/703 (55.62%), Query Frame = 0


Query: 13  DLLFLDSSPFSKLLSQC--VRSKSSRDTSRVHACIIKSPFASETFIQNRLIDAYGKCRCV 72
           DL+   ++ ++  L  C  +R  S +    VH  II   F     I NRLID Y K   +
Sbjct: 6   DLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSEL 65

Query: 73  DVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP--QVDQCSWNSMISGFEQ 132
           + AR+LFD + E +  +  +++  +  SG +  A  +FEK P    D   +N+MI+GF  
Sbjct: 66  NYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSH 125

Query: 133 HDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGL-QDLKSGSQIHSLIYRSNYLSDVY 192
           ++    A+  F +M   GF  + ++F S L+  A +  D K   Q H+   +S       
Sbjct: 126 NNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITS 185

Query: 193 MGSALVDMYSKCGR----VDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVD--------- 252
           + +ALV +YSKC      +  A+ VFD +  +   SW +++T Y +NG  D         
Sbjct: 186 VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245

Query: 253 -----------------------EALKIFVEMIECGVEPDEVTLASVVSACATISAIKEG 312
                                  EAL++   M+  G+E DE T  SV+ ACAT   ++ G
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305

Query: 313 QQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAK 372
           +Q+HA V++ ++F       N+L+ +Y KC + +EAR IF+ MP + +VS  +++SGY  
Sbjct: 306 KQVHAYVLRREDF--SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVS 365

Query: 373 ASRVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALTLFRLLKRESVWPTHYTFGNL 432
           +  +  A+ +F  M  K++++W  +I+G  +NG  EE L LF  +KRE   P  Y F   
Sbjct: 366 SGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 425

Query: 433 LNACANLADLQLGRQAHSHVLKHGFRFQYGEESDVFVGNSLIDMYMKCGSVENGCSVFEH 492
           + +CA L     G+Q H+ +LK GF      +S +  GN+LI MY KCG VE    VF  
Sbjct: 426 IKSCAVLGAYCNGQQYHAQLLKIGF------DSSLSAGNALITMYAKCGVVEEARQVFRT 485

Query: 493 MLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEKPDHVTMIGVLCACSHAGLLDEG 552
           M   D VSWNA+I    Q+G G +A++V+ +ML+ G +PD +T++ VL ACSHAGL+D+G
Sbjct: 486 MPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQG 545

Query: 553 RYYFRSMSAQHGLVPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMKPDAIVWGSLLAACK 612
           R YF SM   + + P  DHY  ++DLL R+G   +A+++IE +  KP A +W +LL+ C+
Sbjct: 546 RKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCR 605

Query: 613 VHRNIKLGEYVVEKLLEVDPENSGPYVLLSNMYAERRDWKNVVRIRKLMRQRGVIKQPGC 672
           VH N++LG    +KL  + PE+ G Y+LLSNM+A    W+ V R+RKLMR RGV K+  C
Sbjct: 606 VHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVAC 665

Query: 673 SWIEIQGQLNVFMVKDKRHVRKKEIYMLLITLLQQMKRAGYVP 675
           SWIE++ Q++ F+V D  H   + +Y+ L  L ++M+R GYVP
Sbjct: 666 SWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVP 700

[Close]

BLAST of Lsi11G000600 vs. ExPASy Swiss-Prot
Match: Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 441.0 bits (1133), Expect = 2.4e-122
Identity = 246/682 (36.07%), Postives = 376/682 (55.13%), Query Frame = 0


Query: 6   LVKHLKGDLLFLDSSPFSKLLSQCVRSKSSRDTSRVHACIIKSPFASETFIQNRLIDAYG 65
           L K +  D L  DS+  + L+  C    +     ++HA   K  FAS   I+  L++ Y 
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435

Query: 66  KCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISG 125
           KC  ++ A   F      N+  WN ++ A+   G LDD  + F                 
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSFR---------------- 495

Query: 126 FEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRSNYLSD 185
                        F QM     + N+Y++ S L  C  L DL+ G QIHS I ++N+  +
Sbjct: 496 ------------IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN 555

Query: 186 VYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIE 245
            Y+ S L+DMY+K G++D A  +      +  VSW ++I  Y Q    D+AL  F +M++
Sbjct: 556 AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 615

Query: 246 CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRIN 305
            G+  DEV L + VSACA + A+KEGQQIHA+      F +DL   NAL+ +Y++C +I 
Sbjct: 616 RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSRCGKIE 675

Query: 306 EARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGCTQNGE 365
           E+ + F+                                    D I WNAL++G  Q+G 
Sbjct: 676 ESYLAFEQTE-------------------------------AGDNIAWNALVSGFQQSGN 735

Query: 366 NEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEESD 425
           NEEAL +F  + RE +   ++TFG+ + A +  A+++ G+Q H+ + K G+      +S+
Sbjct: 736 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY------DSE 795

Query: 426 VFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLE 485
             V N+LI MY KCGS+ +    F  +  ++ VSWNA+I  Y+++GFG++AL+ F +M+ 
Sbjct: 796 TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH 855

Query: 486 SGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGRAGYLE 545
           S  +P+HVT++GVL ACSH GL+D+G  YF SM++++GL P  +HY C+VD+L RAG L 
Sbjct: 856 SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLS 915

Query: 546 EAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLLSNMYA 605
            AK  I+EM +KPDA+VW +LL+AC VH+N+++GE+    LLE++PE+S  YVLLSN+YA
Sbjct: 916 RAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 975

Query: 606 ERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLLITLLQ 665
             + W      R+ M+++GV K+PG SWIE++  ++ F V D+ H    EI+     L +
Sbjct: 976 VSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTK 988

Query: 666 QMKRAGYVPHVES--NEIDEEQ 686
           +    GYV    S  NE+  EQ
Sbjct: 1036 RASEIGYVQDCFSLLNELQHEQ 988

[Close]

BLAST of Lsi11G000600 vs. ExPASy TrEMBL
Match: A0A0A0KJ63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003610 PE=4 SV=1)

HSP 1 Score: 1331.2 bits (3444), Expect = 0.0e+00
Identity = 643/685 (93.87%), Postives = 670/685 (97.81%), Query Frame = 0


Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLSQCVRSKSSRDTSRVHACIIKSPFASETFIQNRL 60
           MAGNGLVKHLKGDLLFLDSSPFSKLL+QC RS+S+RDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60

Query: 61  IDAYGKCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           ID YGKC CVDVARKLFDR+LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120

Query: 121 SMISGFEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRS 180
           SMISGFEQH RFDEAL+YFAQMHGHGFL+NEYSFGSALSACAGLQDLK GSQIHSL+YRS
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRV+YAQSVFD MTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMI+CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARIIFDMMPIRSVVSETSMVSGYAKAS+VKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
           TQNGENEEAL LFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY
Sbjct: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420

Query: 421 GEESDVFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480
           GE+SDVFVGNSLIDMYMKCGSVENGC VF+HMLE+DCVSWNAMIVGYAQNGFGNKALEVF
Sbjct: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480

Query: 481 SKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGR 540
            KMLESGE PDHVTMIGVLCACSHAGLLDEGRYYFRSM+AQHGL+PLKDHYTCMVDLLGR
Sbjct: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540

Query: 541 AGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL 600
           AGYLEEAKNLIEEMSM+PDAIVWGSLLAACKVHRNI+LGEYVV+KLLEVDPENSGPYVLL
Sbjct: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600

Query: 601 SNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLL 660
           SNMYAE RDWKNVVR+RKLMRQRGV+KQPGCSWIEIQG+LNVFMVKDKRH RKKEIYM+L
Sbjct: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660

Query: 661 ITLLQQMKRAGYVPHVESNEIDEEQ 686
            T+LQQMK+AGYVP+V SNE DE++
Sbjct: 661 RTILQQMKQAGYVPYVGSNEFDEDE 685

[Close]

BLAST of Lsi11G000600 vs. ExPASy TrEMBL
Match: A0A5A7VCZ2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00590 PE=4 SV=1)

HSP 1 Score: 1313.5 bits (3398), Expect = 0.0e+00
Identity = 638/685 (93.14%), Postives = 663/685 (96.79%), Query Frame = 0


Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLSQCVRSKSSRDTSRVHACIIKSPFASETFIQNRL 60
           MA NGLVKHLKGD LFLDSSPFSKLL+QCVRS+S+RDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1   MARNGLVKHLKGDFLFLDSSPFSKLLNQCVRSRSARDTSRVHACIIKSPFASETFIQNRL 60

Query: 61  IDAYGKCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           ID YGKC CVDVARKLFDR+LERNIFSWNSIICAFTKSGFLDDAVHIFEKMP+VDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPEVDQCSWN 120

Query: 121 SMISGFEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRS 180
           SMISGFEQH RF EAL+YFAQMHGHGFL+NEYSFGSALSACAGLQDLK GSQIHSL+YRS
Sbjct: 121 SMISGFEQHGRFYEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRV+YAQS FD MTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSAFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARIIFDMMPIRSVVSETSMVSGYAKAS+VKVAR MFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARSMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
           TQNGENEEAL LFRLLKRES+WPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY
Sbjct: 361 TQNGENEEALILFRLLKRESIWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420

Query: 421 GEESDVFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480
           GE+SDVFVGNSLIDMYMKCGSVENGC VF+HMLERDCVSWNAMIVGYAQNGFGNKALEVF
Sbjct: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480

Query: 481 SKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGR 540
           SKMLESGE PDHVTMIGVL ACSHAGLLDEGRYYFRSM+AQHGL+PLKDHYTCMVDLLGR
Sbjct: 481 SKMLESGEGPDHVTMIGVLSACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540

Query: 541 AGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL 600
           AGYLEEAKNLIEEMSM+PDAIVWGSLLAACKVHRNI+LGEYVVEKLLEVDPENSGPYVLL
Sbjct: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVEKLLEVDPENSGPYVLL 600

Query: 601 SNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLL 660
           SNMYAE RDWKNVVR+RKLMRQRGVIKQPGCSWIEIQG+LNVFMVKDKRH RKKEI M+L
Sbjct: 601 SNMYAENRDWKNVVRVRKLMRQRGVIKQPGCSWIEIQGELNVFMVKDKRHARKKEICMVL 660

Query: 661 ITLLQQMKRAGYVPHVESNEIDEEQ 686
            T+L QMK+AGYVP+  SNE DE++
Sbjct: 661 RTILHQMKQAGYVPYAGSNEFDEDE 685

[Close]

BLAST of Lsi11G000600 vs. ExPASy TrEMBL
Match: A0A1S3CNR0 (pentatricopeptide repeat-containing protein At2g13600 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502546 PE=4 SV=1)

HSP 1 Score: 1313.5 bits (3398), Expect = 0.0e+00
Identity = 638/685 (93.14%), Postives = 663/685 (96.79%), Query Frame = 0


Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLSQCVRSKSSRDTSRVHACIIKSPFASETFIQNRL 60
           MA NGLVKHLKGD LFLDSSPFSKLL+QCVRS+S+RDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1   MARNGLVKHLKGDFLFLDSSPFSKLLNQCVRSRSARDTSRVHACIIKSPFASETFIQNRL 60

Query: 61  IDAYGKCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           ID YGKC CVDVARKLFDR+LERNIFSWNSIICAFTKSGFLDDAVHIFEKMP+VDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPEVDQCSWN 120

Query: 121 SMISGFEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRS 180
           SMISGFEQH RF EAL+YFAQMHGHGFL+NEYSFGSALSACAGLQDLK GSQIHSL+YRS
Sbjct: 121 SMISGFEQHGRFYEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRV+YAQS FD MTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSAFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARIIFDMMPIRSVVSETSMVSGYAKAS+VKVAR MFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARSMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
           TQNGENEEAL LFRLLKRES+WPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY
Sbjct: 361 TQNGENEEALILFRLLKRESIWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420

Query: 421 GEESDVFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480
           GE+SDVFVGNSLIDMYMKCGSVENGC VF+HMLERDCVSWNAMIVGYAQNGFGNKALEVF
Sbjct: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480

Query: 481 SKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGR 540
           SKMLESGE PDHVTMIGVL ACSHAGLLDEGRYYFRSM+AQHGL+PLKDHYTCMVDLLGR
Sbjct: 481 SKMLESGEGPDHVTMIGVLSACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540

Query: 541 AGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL 600
           AGYLEEAKNLIEEMSM+PDAIVWGSLLAACKVHRNI+LGEYVVEKLLEVDPENSGPYVLL
Sbjct: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVEKLLEVDPENSGPYVLL 600

Query: 601 SNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLL 660
           SNMYAE RDWKNVVR+RKLMRQRGVIKQPGCSWIEIQG+LNVFMVKDKRH RKKEI M+L
Sbjct: 601 SNMYAENRDWKNVVRVRKLMRQRGVIKQPGCSWIEIQGELNVFMVKDKRHARKKEICMVL 660

Query: 661 ITLLQQMKRAGYVPHVESNEIDEEQ 686
            T+L QMK+AGYVP+  SNE DE++
Sbjct: 661 RTILHQMKQAGYVPYAGSNEFDEDE 685

[Close]

BLAST of Lsi11G000600 vs. ExPASy TrEMBL
Match: A0A6J1EB52 (pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita moschata OX=3662 GN=LOC111430973 PE=4 SV=1)

HSP 1 Score: 1295.8 bits (3352), Expect = 0.0e+00
Identity = 630/685 (91.97%), Postives = 655/685 (95.62%), Query Frame = 0


Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLSQCVRSKSSRDTSRVHACIIKSPFASETFIQNRL 60
           MAGNG ++ L GDLLFLDSSP SKLL+QC RSKS+RDTSRVHACIIKSPFASE FIQNRL
Sbjct: 3   MAGNGFIRRLTGDLLFLDSSPLSKLLNQCARSKSARDTSRVHACIIKSPFASEVFIQNRL 62

Query: 61  IDAYGKCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           ID YGKC CVDVARK+FDR+LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 63  IDVYGKCGCVDVARKVFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 122

Query: 121 SMISGFEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRS 180
           SMISGFEQHDRFDEAL YF QMHGHGF MNEYSFGSALSACAGLQDLK GSQIHSLIYRS
Sbjct: 123 SMISGFEQHDRFDEALKYFVQMHGHGFFMNEYSFGSALSACAGLQDLKMGSQIHSLIYRS 182

Query: 181 NYLSDVYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSD+YMGSALVDMYSKCGRVD A+SVFDGMTVRSRVSWNSLITCYEQNGPVDEAL IF
Sbjct: 183 NYLSDMYMGSALVDMYSKCGRVDCARSVFDGMTVRSRVSWNSLITCYEQNGPVDEALSIF 242

Query: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMIECGVEPDEVTLASVVSACAT+SAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 243 VEMIECGVEPDEVTLASVVSACATVSAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 302

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARI+FD MPIRSVVSETSMVSGYAKAS VK AR MFSNMMVKDVITWNALIAGC
Sbjct: 303 CNRINEARIVFDRMPIRSVVSETSMVSGYAKASSVKAARSMFSNMMVKDVITWNALIAGC 362

Query: 361 TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
           TQNGENEEAL LFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRF+Y
Sbjct: 363 TQNGENEEALALFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFRY 422

Query: 421 GEESDVFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480
           G+ESD+FVGNSLIDMYMKCGSVENGC VFEHMLERDCVSWNAMIVGYAQNGFGNKAL +F
Sbjct: 423 GDESDIFVGNSLIDMYMKCGSVENGCRVFEHMLERDCVSWNAMIVGYAQNGFGNKALGIF 482

Query: 481 SKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGR 540
           S+MLESGEKPDHVTMIGVL ACSHAGLL+EGR+YFRSM A+HGLVPLKDHYTCMVDLLGR
Sbjct: 483 SEMLESGEKPDHVTMIGVLSACSHAGLLNEGRHYFRSMRARHGLVPLKDHYTCMVDLLGR 542

Query: 541 AGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL 600
           AG LEEAKNLIEEM M+PDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL
Sbjct: 543 AGCLEEAKNLIEEMPMQPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL 602

Query: 601 SNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLL 660
           SNMYAER DW NVVRIRKLMRQRGV+KQPGCSWIEIQG+LNVFMVKDKRH RK+EIYMLL
Sbjct: 603 SNMYAERGDWGNVVRIRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKQEIYMLL 662

Query: 661 ITLLQQMKRAGYVPHVESNEIDEEQ 686
            TLLQQMKRAGYVP+V ++EIDEEQ
Sbjct: 663 RTLLQQMKRAGYVPYVGNDEIDEEQ 687

[Close]

BLAST of Lsi11G000600 vs. ExPASy TrEMBL
Match: A0A6J1HNH1 (pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita maxima OX=3661 GN=LOC111465245 PE=4 SV=1)

HSP 1 Score: 1288.5 bits (3333), Expect = 0.0e+00
Identity = 628/685 (91.68%), Postives = 653/685 (95.33%), Query Frame = 0


Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLSQCVRSKSSRDTSRVHACIIKSPFASETFIQNRL 60
           MAGNG VK L GDLLFLDSSP SKLL+QC RSKS+RDTSRVHACIIKSPFASE FIQNRL
Sbjct: 3   MAGNGFVKRLTGDLLFLDSSPLSKLLNQCARSKSARDTSRVHACIIKSPFASEVFIQNRL 62

Query: 61  IDAYGKCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           ID YGKC CV VARK+FDR+LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 63  IDVYGKCGCVGVARKVFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 122

Query: 121 SMISGFEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRS 180
           SMISGFEQHD FDEAL YF QMHGHGF MNEYSFGSALSACAGLQDLK GSQIHSLIYRS
Sbjct: 123 SMISGFEQHDCFDEALKYFVQMHGHGFFMNEYSFGSALSACAGLQDLKMGSQIHSLIYRS 182

Query: 181 NYLSDVYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSD+YMGSALVDMYSKCGRVD A+SVFDGMTVRSRVSWNSLITCYEQNGPVDEAL IF
Sbjct: 183 NYLSDMYMGSALVDMYSKCGRVDCARSVFDGMTVRSRVSWNSLITCYEQNGPVDEALSIF 242

Query: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMIECGVEPDEVTLASVVSACAT+SAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 243 VEMIECGVEPDEVTLASVVSACATVSAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 302

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARI+FD MPIRSVVSETSMVSGYAKAS VK AR MFSNMMVKDVITWNALIAGC
Sbjct: 303 CNRINEARIVFDRMPIRSVVSETSMVSGYAKASSVKAARSMFSNMMVKDVITWNALIAGC 362

Query: 361 TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
           TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRF+Y
Sbjct: 363 TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFRY 422

Query: 421 GEESDVFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480
           G+ESD+FVGNSLIDMYMKCGSVE+GC VFE MLERDCVSWNAMIVGYAQNGFGNKAL +F
Sbjct: 423 GDESDIFVGNSLIDMYMKCGSVESGCRVFERMLERDCVSWNAMIVGYAQNGFGNKALGIF 482

Query: 481 SKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGR 540
           S+MLESGEKPDHVTMIGVL ACSHAGLLDEGR+YFRSM A+HGLVPLKDHYTCMVDLLGR
Sbjct: 483 SEMLESGEKPDHVTMIGVLSACSHAGLLDEGRHYFRSMRARHGLVPLKDHYTCMVDLLGR 542

Query: 541 AGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL 600
           AG LEEAKN+IEEM M+PDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL
Sbjct: 543 AGCLEEAKNIIEEMPMQPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL 602

Query: 601 SNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLL 660
           SNMYAER DW NV+RIRKLMRQRGV+KQPGCSWIEIQG+LNVFMVKDKRH RK+EIYMLL
Sbjct: 603 SNMYAERGDWGNVMRIRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKQEIYMLL 662

Query: 661 ITLLQQMKRAGYVPHVESNEIDEEQ 686
            TLLQQMKRAGYVP+V ++EIDEEQ
Sbjct: 663 RTLLQQMKRAGYVPYVGNDEIDEEQ 687

[Close]

BLAST of Lsi11G000600 vs. NCBI nr
Match: XP_038891428.1 (pentatricopeptide repeat-containing protein At2g13600-like [Benincasa hispida])

HSP 1 Score: 1330.5 bits (3442), Expect = 0.0e+00
Identity = 654/685 (95.47%), Postives = 666/685 (97.23%), Query Frame = 0


Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLSQCVRSKSSRDTSRVHACIIKSPFASETFIQNRL 60
           MAGNGLVKHL+G+L FLDSSPFSKLL+QC R KS RDTSRVHA IIKSPFASETFIQNRL
Sbjct: 1   MAGNGLVKHLRGELPFLDSSPFSKLLNQCARLKSVRDTSRVHARIIKSPFASETFIQNRL 60

Query: 61  IDAYGKCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           ID YGKC CVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120

Query: 121 SMISGFEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRS 180
           SMISGFEQHD F EALIYF QMHG GF+MNEYSFGSALSACAGLQDLK GSQIHSLIYRS
Sbjct: 121 SMISGFEQHDCFGEALIYFTQMHGQGFVMNEYSFGSALSACAGLQDLKLGSQIHSLIYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRVDYAQSVFD MTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVDYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRI+EARI+FD+MPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRISEARIVFDLMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
           TQNGENEEAL LFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRF+Y
Sbjct: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFRY 420

Query: 421 GEESDVFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480
           GEESDVFVGNSLIDMYMKCGSVENGC VFEHMLERDCVSWNAMIVGYAQNGFGNKALEVF
Sbjct: 421 GEESDVFVGNSLIDMYMKCGSVENGCRVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480

Query: 481 SKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGR 540
           SKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGR
Sbjct: 481 SKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGR 540

Query: 541 AGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL 600
           AGYLEEAKNLIEEMSM+PDAIVWGSLLAACKVHR+IKLGEYVVEKLLEVDPENSGPYVLL
Sbjct: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRDIKLGEYVVEKLLEVDPENSGPYVLL 600

Query: 601 SNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLL 660
           SNMYAERRDWKNVVRIRKLMR RGVIKQPGCSWIEIQGQLNVFMVKDKRH RKKEIYMLL
Sbjct: 601 SNMYAERRDWKNVVRIRKLMRLRGVIKQPGCSWIEIQGQLNVFMVKDKRHARKKEIYMLL 660

Query: 661 ITLLQQMKRAGYVPHVESNEIDEEQ 686
            TLLQQMK+AGYVP+V SNEIDEEQ
Sbjct: 661 RTLLQQMKQAGYVPYVGSNEIDEEQ 685

[Close]

BLAST of Lsi11G000600 vs. NCBI nr
Match: XP_031742312.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis sativus])

HSP 1 Score: 1328.5 bits (3437), Expect = 0.0e+00
Identity = 642/685 (93.72%), Postives = 669/685 (97.66%), Query Frame = 0


Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLSQCVRSKSSRDTSRVHACIIKSPFASETFIQNRL 60
           MAGNGLVKHLKGDLLFLDSSPFSKLL+QC RS+S+RDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60

Query: 61  IDAYGKCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           ID YGKC CVDVARKLFDR+LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120

Query: 121 SMISGFEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRS 180
           SMISGFEQH RFDEAL+YFAQMHGHGFL+NEYSFGSALSACAGLQDLK GSQIHSL+YRS
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRV+YAQSVFD MTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMI+CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARIIFDMMPIRSVVSETSMVSGYAKAS+VKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
           TQNGENEEAL LFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY
Sbjct: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420

Query: 421 GEESDVFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480
           GE+SDVFVGNSLIDMYMKCGSVENGC VF+HMLE+DCVSWNAMIVGYAQNGFGNKALEVF
Sbjct: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480

Query: 481 SKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGR 540
            KMLESGE PDHVTMIGVLCACSHAGLLDEGRYYFRSM+AQHGL+PLKDHYTCMVDLLGR
Sbjct: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540

Query: 541 AGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL 600
           AGYLEEAK LIEEMSM+PDAIVWGSLLAACKVHRNI+LGEYVV+KLLEVDPENSGPYVLL
Sbjct: 541 AGYLEEAKXLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600

Query: 601 SNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLL 660
           SNMYAE RDWKNVVR+RKLMRQRGV+KQPGCSWIEIQG+LNVFMVKDKRH RKKEIYM+L
Sbjct: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660

Query: 661 ITLLQQMKRAGYVPHVESNEIDEEQ 686
            T+LQQMK+AGYVP+V SNE DE++
Sbjct: 661 RTILQQMKQAGYVPYVGSNEFDEDE 685

[Close]

BLAST of Lsi11G000600 vs. NCBI nr
Match: XP_004149135.2 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600 [Cucumis sativus])

HSP 1 Score: 1326.2 bits (3431), Expect = 0.0e+00
Identity = 641/685 (93.58%), Postives = 668/685 (97.52%), Query Frame = 0


Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLSQCVRSKSSRDTSRVHACIIKSPFASETFIQNRL 60
           MAGNGLVKHLKGDLLFLDSSPFSKLL+QC RS+S+RDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60

Query: 61  IDAYGKCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           ID YGKC CVDVARKLFDR+LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120

Query: 121 SMISGFEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRS 180
           SMISGFEQH RFDEAL+YFAQMHGHGFL+NEYSFGSALSACAGLQDLK GSQIHSL+YRS
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRV+YAQSVFD MTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMI+CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARIIFDMMPIRSVVSETSMVSGYAKAS+VKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
           TQNGENEEAL LFRLLK ESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY
Sbjct: 361 TQNGENEEALILFRLLKXESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420

Query: 421 GEESDVFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480
           GE+SDVFVGNSLIDMYMKCGSVENGC VF+HMLE+DCVSWNAMIVGYAQNGFGNKALEVF
Sbjct: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480

Query: 481 SKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGR 540
            KMLESGE PDHVTMIGVLCACSHAGLLDEGRYYFRSM+AQHGL+PLKDHYTCMVDLLGR
Sbjct: 481 XKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540

Query: 541 AGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL 600
           AGYLEEAK LIEEMSM+PDAIVWGSLLAACKVHRNI+LGEYVV+KLLEVDPENSGPYVLL
Sbjct: 541 AGYLEEAKXLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600

Query: 601 SNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLL 660
           SNMYAE RDWKNVVR+RKLMRQRGV+KQPGCSWIEIQG+LNVFMVKDKRH RKKEIYM+L
Sbjct: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660

Query: 661 ITLLQQMKRAGYVPHVESNEIDEEQ 686
            T+LQQMK+AGYVP+V SNE DE++
Sbjct: 661 RTILQQMKQAGYVPYVGSNEFDEDE 685

[Close]

BLAST of Lsi11G000600 vs. NCBI nr
Match: XP_008464730.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g13600 isoform X1 [Cucumis melo] >KAA0065508.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08748.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1313.5 bits (3398), Expect = 0.0e+00
Identity = 638/685 (93.14%), Postives = 663/685 (96.79%), Query Frame = 0


Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLSQCVRSKSSRDTSRVHACIIKSPFASETFIQNRL 60
           MA NGLVKHLKGD LFLDSSPFSKLL+QCVRS+S+RDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1   MARNGLVKHLKGDFLFLDSSPFSKLLNQCVRSRSARDTSRVHACIIKSPFASETFIQNRL 60

Query: 61  IDAYGKCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           ID YGKC CVDVARKLFDR+LERNIFSWNSIICAFTKSGFLDDAVHIFEKMP+VDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPEVDQCSWN 120

Query: 121 SMISGFEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRS 180
           SMISGFEQH RF EAL+YFAQMHGHGFL+NEYSFGSALSACAGLQDLK GSQIHSL+YRS
Sbjct: 121 SMISGFEQHGRFYEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRV+YAQS FD MTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSAFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARIIFDMMPIRSVVSETSMVSGYAKAS+VKVAR MFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARSMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
           TQNGENEEAL LFRLLKRES+WPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY
Sbjct: 361 TQNGENEEALILFRLLKRESIWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420

Query: 421 GEESDVFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480
           GE+SDVFVGNSLIDMYMKCGSVENGC VF+HMLERDCVSWNAMIVGYAQNGFGNKALEVF
Sbjct: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480

Query: 481 SKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGR 540
           SKMLESGE PDHVTMIGVL ACSHAGLLDEGRYYFRSM+AQHGL+PLKDHYTCMVDLLGR
Sbjct: 481 SKMLESGEGPDHVTMIGVLSACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540

Query: 541 AGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL 600
           AGYLEEAKNLIEEMSM+PDAIVWGSLLAACKVHRNI+LGEYVVEKLLEVDPENSGPYVLL
Sbjct: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVEKLLEVDPENSGPYVLL 600

Query: 601 SNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLL 660
           SNMYAE RDWKNVVR+RKLMRQRGVIKQPGCSWIEIQG+LNVFMVKDKRH RKKEI M+L
Sbjct: 601 SNMYAENRDWKNVVRVRKLMRQRGVIKQPGCSWIEIQGELNVFMVKDKRHARKKEICMVL 660

Query: 661 ITLLQQMKRAGYVPHVESNEIDEEQ 686
            T+L QMK+AGYVP+  SNE DE++
Sbjct: 661 RTILHQMKQAGYVPYAGSNEFDEDE 685

[Close]

BLAST of Lsi11G000600 vs. NCBI nr
Match: KAG7015869.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1298.9 bits (3360), Expect = 0.0e+00
Identity = 633/685 (92.41%), Postives = 655/685 (95.62%), Query Frame = 0


Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLSQCVRSKSSRDTSRVHACIIKSPFASETFIQNRL 60
           MAGNG V+ L GDLLFLDSSP SKLL+QC RSKS+RDTSRVHACIIKSPFASE FIQNRL
Sbjct: 1   MAGNGFVRRLTGDLLFLDSSPLSKLLNQCARSKSARDTSRVHACIIKSPFASEVFIQNRL 60

Query: 61  IDAYGKCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           ID YGKC CVDVARK+FDR+LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKVFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120

Query: 121 SMISGFEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRS 180
           SMISGFEQHDRFDEAL YF QMHGHGF MNEYSFGSALSACAGLQDLK GSQIHSLIYRS
Sbjct: 121 SMISGFEQHDRFDEALKYFVQMHGHGFFMNEYSFGSALSACAGLQDLKMGSQIHSLIYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSD+YMGSALVDMYSKCGRVD A+SVFDGMTVRSRVSWNSLITCYEQNGPVDEAL IF
Sbjct: 181 NYLSDMYMGSALVDMYSKCGRVDCARSVFDGMTVRSRVSWNSLITCYEQNGPVDEALSIF 240

Query: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMIECGVEPDEVTLASVVSACAT+SAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATVSAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARI+FD MPIRSVVSETSMVSGYAKAS VK AR MFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIVFDRMPIRSVVSETSMVSGYAKASSVKAARSMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
           TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRF+Y
Sbjct: 361 TQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFRY 420

Query: 421 GEESDVFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVF 480
           G+ESD+FVGNSLIDMYMKCGSVENGC VFEHMLERDCVSWNAMIVGYAQNGFGNKAL +F
Sbjct: 421 GDESDIFVGNSLIDMYMKCGSVENGCRVFEHMLERDCVSWNAMIVGYAQNGFGNKALGIF 480

Query: 481 SKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGR 540
           S+MLESGEKPDHVTMIGVL ACSHAGLLDEGR+YFRSM A+HGLVPLKDHYTCMVDLLGR
Sbjct: 481 SEMLESGEKPDHVTMIGVLSACSHAGLLDEGRHYFRSMHARHGLVPLKDHYTCMVDLLGR 540

Query: 541 AGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL 600
           AG LEEAKNLIEEM M+PDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL
Sbjct: 541 AGCLEEAKNLIEEMPMQPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLL 600

Query: 601 SNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLL 660
           SNMYAER DW NVVRIRKLMRQRGV+KQPGCSWIEIQG+LNVFMVKDKRH RK+EIYMLL
Sbjct: 601 SNMYAERGDWGNVVRIRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKQEIYMLL 660

Query: 661 ITLLQQMKRAGYVPHVESNEIDEEQ 686
            TLLQQMKRAGYVP V ++EIDEEQ
Sbjct: 661 RTLLQQMKRAGYVPFVGNDEIDEEQ 685

[Close]

BLAST of Lsi11G000600 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 928.3 bits (2398), Expect = 3.5e-270
Identity = 443/671 (66.02%), Postives = 543/671 (80.92%), Query Frame = 0


Query: 16  FLDSSPFSKLLSQCVRSKSSRDTSR-VHACIIKSPFASETFIQNRLIDAYGKCRCVDVAR 75
           F DSSPF+KLL  C++SK S    R VHA +IKS F++E FIQNRLIDAY KC  ++  R
Sbjct: 16  FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75

Query: 76  KLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHDRFDE 135
           ++FD++ +RNI++WNS++   TK GFLD+A  +F  MP+ DQC+WNSM+SGF QHDR +E
Sbjct: 76  QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135

Query: 136 ALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRSNYLSDVYMGSALVD 195
           AL YFA MH  GF++NEYSF S LSAC+GL D+  G Q+HSLI +S +LSDVY+GSALVD
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195

Query: 196 MYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIECGVEPDEVT 255
           MYSKCG V+ AQ VFD M  R+ VSWNSLITC+EQNGP  EAL +F  M+E  VEPDEVT
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255

Query: 256 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 315
           LASV+SACA++SAIK GQ++H RVVK D+ RND+IL NA +DMYAKC+RI EAR IFD M
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315

Query: 316 PIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALTLFR 375
           PIR+V++ETSM+SGYA A+  K AR MF+ M  ++V++WNALIAG TQNGENEEAL+LF 
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375

Query: 376 LLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEESDVFVGNSLID 435
           LLKRESV PTHY+F N+L ACA+LA+L LG QAH HVLKHGF+FQ GEE D+FVGNSLID
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435

Query: 436 MYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEKPDHVT 495
           MY+KCG VE G  VF  M+ERDCVSWNAMI+G+AQNG+GN+ALE+F +MLESGEKPDH+T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495

Query: 496 MIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGRAGYLEEAKNLIEEM 555
           MIGVL AC HAG ++EGR+YF SM+   G+ PL+DHYTCMVDLLGRAG+LEEAK++IEEM
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555

Query: 556 SMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLLSNMYAERRDWKNVV 615
            M+PD+++WGSLLAACKVHRNI LG+YV EKLLEV+P NSGPYVLLSNMYAE   W++V+
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615

Query: 616 RIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLLITLLQQMKRAGYVP 675
            +RK MR+ GV KQPGCSWI+IQG  +VFMVKDK H RKK+I+ LL  L+ +M+      
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE--QD 675

Query: 676 HVESNEIDEEQ 686
           H E   +  E+
Sbjct: 676 HTEIGSLSSEE 684

[Close]

BLAST of Lsi11G000600 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 469.2 bits (1206), Expect = 5.8e-132
Identity = 250/700 (35.71%), Postives = 397/700 (56.71%), Query Frame = 0


Query: 23  SKLLSQCVRSKSSRDTSR-VHACIIKSPFASETFIQNRLIDAYGKCRCVDVARKLFDRLL 82
           + LL + V   + R T++ VH  +IKS      ++ N L++ Y K      ARKLFD + 
Sbjct: 17  TNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMP 76

Query: 83  ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHDRFDEALIYFAQ 142
            R  FSWN+++ A++K G +D     F+++PQ D  SW +MI G++   ++ +A+     
Sbjct: 77  LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136

Query: 143 MHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRSNYLSDVYMGSALVDMYSKCGR 202
           M   G    +++  + L++ A  + +++G ++HS I +     +V + ++L++MY+KCG 
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196

Query: 203 VDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIECGV------------- 262
              A+ VFD M VR   SWN++I  + Q G +D A+  F +M E  +             
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256

Query: 263 -------------------EPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLI 322
                               PD  TLASV+SACA +  +  G+QIH+ +V      + ++
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316

Query: 323 LGNALLDMYAKCNRINEARIIFDMMPIRSVVSE--TSMVSGYAKASRVKVARYMFSNMMV 382
           L NAL+ MY++C  +  AR + +    + +  E  T+++ GY K   +  A+ +F ++  
Sbjct: 317 L-NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKD 376

Query: 383 KDVITWNALIAGCTQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQA 442
           +DV+ W A+I G  Q+G   EA+ LFR +      P  YT   +L+  ++LA L  G+Q 
Sbjct: 377 RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI 436

Query: 443 HSHVLKHGFRFQYGEESDVFVGNSLIDMYMKCGSVENGCSVFEHM-LERDCVSWNAMIVG 502
           H   +K       GE   V V N+LI MY K G++ +    F+ +  ERD VSW +MI+ 
Sbjct: 437 HGSAVKS------GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIA 496

Query: 503 YAQNGFGNKALEVFSKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVP 562
            AQ+G   +ALE+F  ML  G +PDH+T +GV  AC+HAGL+++GR YF  M     ++P
Sbjct: 497 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIP 556

Query: 563 LKDHYTCMVDLLGRAGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKL 622
              HY CMVDL GRAG L+EA+  IE+M ++PD + WGSLL+AC+VH+NI LG+   E+L
Sbjct: 557 TLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERL 616

Query: 623 LEVDPENSGPYVLLSNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVK 682
           L ++PENSG Y  L+N+Y+    W+   +IRK M+   V K+ G SWIE++ +++VF V+
Sbjct: 617 LLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVE 676

Query: 683 DKRHVRKKEIYMLLITLLQQMKRAGYVPHVES--NEIDEE 685
           D  H  K EIYM +  +  ++K+ GYVP   S  ++++EE
Sbjct: 677 DGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEE 709

[Close]

BLAST of Lsi11G000600 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 456.1 bits (1172), Expect = 5.1e-128
Identity = 245/630 (38.89%), Postives = 379/630 (60.16%), Query Frame = 0


Query: 58  NRLIDAYGKCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQC 117
           N +I  Y +    ++ARKLFD + ER++ SWN +I  + ++  L  A  +FE MP+ D C
Sbjct: 99  NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158

Query: 118 SWNSMISGFEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLI 177
           SWN+M+SG+ Q+   D+A   F +M       N+ S+ + LSA      ++       ++
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEA----CML 218

Query: 178 YRSNYLSDVYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEAL 237
           ++S     +   + L+  + K  ++  A+  FD M VR  VSWN++IT Y Q+G +DEA 
Sbjct: 219 FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEAR 278

Query: 238 KIFVEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDM 297
           ++F E        D  T  ++VS       ++E +++  ++ + +E     +  NA+L  
Sbjct: 279 QLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE-----VSWNAMLAG 338

Query: 298 YAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALI 357
           Y +  R+  A+ +FD+MP R+V +  +M++GYA+  ++  A+ +F  M  +D ++W A+I
Sbjct: 339 YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMI 398

Query: 358 AGCTQNGENEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFR 417
           AG +Q+G + EAL LF  ++RE       +F + L+ CA++  L+LG+Q H  ++K G+ 
Sbjct: 399 AGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY- 458

Query: 418 FQYGEESDVFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKAL 477
                E+  FVGN+L+ MY KCGS+E    +F+ M  +D VSWN MI GY+++GFG  AL
Sbjct: 459 -----ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 518

Query: 478 EVFSKMLESGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDL 537
             F  M   G KPD  TM+ VL ACSH GL+D+GR YF +M+  +G++P   HY CMVDL
Sbjct: 519 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 578

Query: 538 LGRAGYLEEAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPY 597
           LGRAG LE+A NL++ M  +PDA +WG+LL A +VH N +L E   +K+  ++PENSG Y
Sbjct: 579 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMY 638

Query: 598 VLLSNMYAERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIY 657
           VLLSN+YA    W +V ++R  MR +GV K PG SWIEIQ + + F V D+ H  K EI+
Sbjct: 639 VLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIF 698

Query: 658 MLLITLLQQMKRAGYV--PHVESNEIDEEQ 686
             L  L  +MK+AGYV    V  ++++EE+
Sbjct: 699 AFLEELDLRMKKAGYVSKTSVVLHDVEEEE 705

[Close]

BLAST of Lsi11G000600 vs. TAIR 10
Match: AT1G25360.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 451.4 bits (1160), Expect = 1.3e-126
Identity = 254/703 (36.13%), Postives = 391/703 (55.62%), Query Frame = 0


Query: 13  DLLFLDSSPFSKLLSQC--VRSKSSRDTSRVHACIIKSPFASETFIQNRLIDAYGKCRCV 72
           DL+   ++ ++  L  C  +R  S +    VH  II   F     I NRLID Y K   +
Sbjct: 6   DLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSEL 65

Query: 73  DVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP--QVDQCSWNSMISGFEQ 132
           + AR+LFD + E +  +  +++  +  SG +  A  +FEK P    D   +N+MI+GF  
Sbjct: 66  NYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSH 125

Query: 133 HDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGL-QDLKSGSQIHSLIYRSNYLSDVY 192
           ++    A+  F +M   GF  + ++F S L+  A +  D K   Q H+   +S       
Sbjct: 126 NNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITS 185

Query: 193 MGSALVDMYSKCGR----VDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVD--------- 252
           + +ALV +YSKC      +  A+ VFD +  +   SW +++T Y +NG  D         
Sbjct: 186 VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245

Query: 253 -----------------------EALKIFVEMIECGVEPDEVTLASVVSACATISAIKEG 312
                                  EAL++   M+  G+E DE T  SV+ ACAT   ++ G
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305

Query: 313 QQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAK 372
           +Q+HA V++ ++F       N+L+ +Y KC + +EAR IF+ MP + +VS  +++SGY  
Sbjct: 306 KQVHAYVLRREDF--SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVS 365

Query: 373 ASRVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALTLFRLLKRESVWPTHYTFGNL 432
           +  +  A+ +F  M  K++++W  +I+G  +NG  EE L LF  +KRE   P  Y F   
Sbjct: 366 SGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 425

Query: 433 LNACANLADLQLGRQAHSHVLKHGFRFQYGEESDVFVGNSLIDMYMKCGSVENGCSVFEH 492
           + +CA L     G+Q H+ +LK GF      +S +  GN+LI MY KCG VE    VF  
Sbjct: 426 IKSCAVLGAYCNGQQYHAQLLKIGF------DSSLSAGNALITMYAKCGVVEEARQVFRT 485

Query: 493 MLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLESGEKPDHVTMIGVLCACSHAGLLDEG 552
           M   D VSWNA+I    Q+G G +A++V+ +ML+ G +PD +T++ VL ACSHAGL+D+G
Sbjct: 486 MPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQG 545

Query: 553 RYYFRSMSAQHGLVPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMKPDAIVWGSLLAACK 612
           R YF SM   + + P  DHY  ++DLL R+G   +A+++IE +  KP A +W +LL+ C+
Sbjct: 546 RKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCR 605

Query: 613 VHRNIKLGEYVVEKLLEVDPENSGPYVLLSNMYAERRDWKNVVRIRKLMRQRGVIKQPGC 672
           VH N++LG    +KL  + PE+ G Y+LLSNM+A    W+ V R+RKLMR RGV K+  C
Sbjct: 606 VHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVAC 665

Query: 673 SWIEIQGQLNVFMVKDKRHVRKKEIYMLLITLLQQMKRAGYVP 675
           SWIE++ Q++ F+V D  H   + +Y+ L  L ++M+R GYVP
Sbjct: 666 SWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVP 700

[Close]

BLAST of Lsi11G000600 vs. TAIR 10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 441.0 bits (1133), Expect = 1.7e-123
Identity = 246/682 (36.07%), Postives = 376/682 (55.13%), Query Frame = 0


Query: 6   LVKHLKGDLLFLDSSPFSKLLSQCVRSKSSRDTSRVHACIIKSPFASETFIQNRLIDAYG 65
           L K +  D L  DS+  + L+  C    +     ++HA   K  FAS   I+  L++ Y 
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435

Query: 66  KCRCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISG 125
           KC  ++ A   F      N+  WN ++ A+   G LDD  + F                 
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSFR---------------- 495

Query: 126 FEQHDRFDEALIYFAQMHGHGFLMNEYSFGSALSACAGLQDLKSGSQIHSLIYRSNYLSD 185
                        F QM     + N+Y++ S L  C  L DL+ G QIHS I ++N+  +
Sbjct: 496 ------------IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLN 555

Query: 186 VYMGSALVDMYSKCGRVDYAQSVFDGMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIE 245
            Y+ S L+DMY+K G++D A  +      +  VSW ++I  Y Q    D+AL  F +M++
Sbjct: 556 AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 615

Query: 246 CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRIN 305
            G+  DEV L + VSACA + A+KEGQQIHA+      F +DL   NAL+ +Y++C +I 
Sbjct: 616 RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSRCGKIE 675

Query: 306 EARIIFDMMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGCTQNGE 365
           E+ + F+                                    D I WNAL++G  Q+G 
Sbjct: 676 ESYLAFEQTE-------------------------------AGDNIAWNALVSGFQQSGN 735

Query: 366 NEEALTLFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEESD 425
           NEEAL +F  + RE +   ++TFG+ + A +  A+++ G+Q H+ + K G+      +S+
Sbjct: 736 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY------DSE 795

Query: 426 VFVGNSLIDMYMKCGSVENGCSVFEHMLERDCVSWNAMIVGYAQNGFGNKALEVFSKMLE 485
             V N+LI MY KCGS+ +    F  +  ++ VSWNA+I  Y+++GFG++AL+ F +M+ 
Sbjct: 796 TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH 855

Query: 486 SGEKPDHVTMIGVLCACSHAGLLDEGRYYFRSMSAQHGLVPLKDHYTCMVDLLGRAGYLE 545
           S  +P+HVT++GVL ACSH GL+D+G  YF SM++++GL P  +HY C+VD+L RAG L 
Sbjct: 856 SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLS 915

Query: 546 EAKNLIEEMSMKPDAIVWGSLLAACKVHRNIKLGEYVVEKLLEVDPENSGPYVLLSNMYA 605
            AK  I+EM +KPDA+VW +LL+AC VH+N+++GE+    LLE++PE+S  YVLLSN+YA
Sbjct: 916 RAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 975

Query: 606 ERRDWKNVVRIRKLMRQRGVIKQPGCSWIEIQGQLNVFMVKDKRHVRKKEIYMLLITLLQ 665
             + W      R+ M+++GV K+PG SWIE++  ++ F V D+ H    EI+     L +
Sbjct: 976 VSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTK 988

Query: 666 QMKRAGYVPHVES--NEIDEEQ 686
           +    GYV    S  NE+  EQ
Sbjct: 1036 RASEIGYVQDCFSLLNELQHEQ 988

The following BLAST results are available for this feature:

BLAST of Lsi11G000600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIT7	4.9e-269	66.02	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9SHZ8	8.2e-131	35.71	Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX...	[more]
Q9SY02	7.2e-127	38.89	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q9FRI5	1.8e-125	36.13	Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana OX...	[more]
Q9SVP7	2.4e-122	36.07	Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX...	[more]

BLAST of Lsi11G000600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ63	0.0e+00	93.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003610 PE=4 SV=1	[more]
A0A5A7VCZ2	0.0e+00	93.14	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CNR0	0.0e+00	93.14	pentatricopeptide repeat-containing protein At2g13600 isoform X1 OS=Cucumis melo...	[more]
A0A6J1EB52	0.0e+00	91.97	pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita moschata OX=3...	[more]
A0A6J1HNH1	0.0e+00	91.68	pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita maxima OX=366...	[more]

BLAST of Lsi11G000600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891428.1	0.0e+00	95.47	pentatricopeptide repeat-containing protein At2g13600-like [Benincasa hispida]	[more]
XP_031742312.1	0.0e+00	93.72	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600-like ...	[more]
XP_004149135.2	0.0e+00	93.58	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600 [Cucu...	[more]
XP_008464730.1	0.0e+00	93.14	PREDICTED: pentatricopeptide repeat-containing protein At2g13600 isoform X1 [Cuc...	[more]
KAG7015869.1	0.0e+00	92.41	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of Lsi11G000600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G13600.1	3.5e-270	66.02	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G22070.1	5.8e-132	35.71	pentatricopeptide (PPR) repeat-containing protein	[more]
AT4G02750.1	5.1e-128	38.89	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G25360.1	1.3e-126	36.13	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G13650.1	1.7e-123	36.07	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 168..287 e-value: 1.1E-23 score: 86.2 coord: 521..680 e-value: 4.1E-12 score: 48.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 15..167 e-value: 2.4E-27 score: 98.1 coord: 357..520 e-value: 6.1E-38 score: 132.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 218..263 e-value: 3.6E-10 score: 39.9 coord: 456..502 e-value: 1.2E-8 score: 35.0 coord: 348..397 e-value: 1.0E-10 score: 41.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 86..112 e-value: 2.6E-5 score: 24.2 coord: 118..147 e-value: 8.0E-6 score: 25.8 coord: 530..555 e-value: 3.6E-4 score: 20.6 coord: 190..213 e-value: 0.057 score: 13.7 coord: 58..85 e-value: 0.0028 score: 17.8 coord: 292..315 e-value: 0.06 score: 13.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 351..380 e-value: 2.6E-4 score: 18.9 coord: 58..85 e-value: 8.8E-4 score: 17.3 coord: 118..150 e-value: 1.3E-4 score: 19.9 coord: 531..555 e-value: 0.0014 score: 16.7 coord: 430..458 e-value: 1.9E-4 score: 19.4 coord: 323..349 e-value: 0.0015 score: 16.6 coord: 458..491 e-value: 2.5E-8 score: 31.6 coord: 86..111 e-value: 1.5E-4 score: 19.7 coord: 218..252 e-value: 6.6E-9 score: 33.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 115..149 score: 10.172144
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 456..490 score: 12.33152
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 216..250 score: 12.616514
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 425..455 score: 8.593717
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 349..383 score: 11.531345
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 84..114 score: 9.755614
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 22..113 coord: 145..684 coord: 118..221
None	No IPR available	PANTHER	PTHR47926:SF125	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 22..113 coord: 145..684 coord: 118..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi11G000600.1	Lsi11G000600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding