Lsi10G015960 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGGCCAATTCTTGGTGCCGGCGGCGCTAGCTTCGGAGATGTCAACTTGGTGAGCTCCGGCGGCCTATTTTTGCTATCTGTCATCTTACTATCCATCTCTCTCATATCAATGGTCATATTTGCTTGTGGCGACTCCGGTGACCCTCAAAAGAAAAGATATAATGGCGGCGGTGGAGGTTGCGGCGGCGGAGGTTGTGGCGGCGGTGGCTGTGGTGGCTGTGGAGGTTGA ATGGGAAGGCCAATTCTTGGTGCCGGCGGCGCTAGCTTCGGAGATGTCAACTTGGTGAGCTCCGGCGGCCTATTTTTGCTATCTGTCATCTTACTATCCATCTCTCTCATATCAATGGTCATATTTGCTTGTGGCGACTCCGGTGACCCTCAAAAGAAAAGATATAATGGCGGCGGTGGAGGTTGCGGCGGCGGAGGTTGTGGCGGCGGTGGCTGTGGTGGCTGTGGAGGTTGA ATGGGAAGGCCAATTCTTGGTGCCGGCGGCGCTAGCTTCGGAGATGTCAACTTGGTGAGCTCCGGCGGCCTATTTTTGCTATCTGTCATCTTACTATCCATCTCTCTCATATCAATGGTCATATTTGCTTGTGGCGACTCCGGTGACCCTCAAAAGAAAAGATATAATGGCGGCGGTGGAGGTTGCGGCGGCGGAGGTTGTGGCGGCGGTGGCTGTGGTGGCTGTGGAGGTTGA MGRPILGAGGASFGDVNLVSSGGLFLLSVILLSISLISMVIFACGDSGDPQKKRYNGGGGGCGGGGCGGGGCGGCGG Homology
BLAST of Lsi10G015960 vs. ExPASy TrEMBL
Match: A0A6J5WYX6 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS20264 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 6.7e-08 Identity = 48/78 (61.54%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of Lsi10G015960 vs. ExPASy TrEMBL
Match: A0A5N5GBC1 (Loricrin-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_034934 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.6e-07 Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 0
BLAST of Lsi10G015960 vs. ExPASy TrEMBL
Match: A0A498JL81 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_016148 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.3e-06 Identity = 49/84 (58.33%), Postives = 58/84 (69.05%), Query Frame = 0
BLAST of Lsi10G015960 vs. ExPASy TrEMBL
Match: A0A540MXA9 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_010997 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.6e-06 Identity = 48/82 (58.54%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of Lsi10G015960 vs. ExPASy TrEMBL
Match: A0A314XHT1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_41258 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.6e-06 Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of Lsi10G015960 vs. NCBI nr
Match: KAG6604774.1 (hypothetical protein SDJN03_02091, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 83.6 bits (205), Expect = 8.3e-13 Identity = 60/81 (74.07%), Postives = 65/81 (80.25%), Query Frame = 0
BLAST of Lsi10G015960 vs. NCBI nr
Match: KAG6603229.1 (hypothetical protein SDJN03_03838, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 77.4 bits (189), Expect = 6.0e-11 Identity = 50/77 (64.94%), Postives = 57/77 (74.03%), Query Frame = 0
BLAST of Lsi10G015960 vs. NCBI nr
Match: KAG6603228.1 (hypothetical protein SDJN03_03837, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 74.3 bits (181), Expect = 5.0e-10 Identity = 52/80 (65.00%), Postives = 59/80 (73.75%), Query Frame = 0
BLAST of Lsi10G015960 vs. NCBI nr
Match: CAB4273122.1 (unnamed protein product [Prunus armeniaca] >CAB4303638.1 unnamed protein product [Prunus armeniaca]) HSP 1 Score: 66.2 bits (160), Expect = 1.4e-07 Identity = 48/78 (61.54%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of Lsi10G015960 vs. NCBI nr
Match: KAB2612618.1 (loricrin-like [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 62.4 bits (150), Expect = 2.0e-06 Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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