Lsi10G015050 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G015050
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	E3 ubiquitin-protein ligase RGLG4
Location	chr10: 19301721 .. 19311371 (+)
RNA-Seq Expression	Lsi10G015050
Synteny	Lsi10G015050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGTTCACAGTCCTTCGAAGTCGAAAATCGAGTGTTCAAAGTCTGTCGAAGTTCGCTATGGTGGCCATCGGTCACATTCCATCGAAGGAGTCGCGGTCCAAAAAACGGCTACTATAAACCCATTTTCTTGTAGTTCCGAATCTACAAATATAGGATTCCAAGCATTAGAGACAAAGTCTAAAGAACCTTAATCTAGTTCGACAAGGAATTTAGAGTATCAAAGCTATTGAATCTTACCCAAAACAAGTCAGAACCTTATGATTGGTGTCCAAATGCGCTGAATCCTACATATTCTGAGCAATTGAGCAATAGGTTTAACAAATCTAATGTCGAAAGGGATTGGGCAAGTGTCGAAACTCACCGAACATGGAAAAAAACGTTGTTGTAGGGTGTTCAAACCGCGTGGATTGTCGCTGAAACTTGCCCAAAACGCGTGAGTTACTTCAGTTGCTGCTACCATAGGTGAGGGCTGCTGGTTTGTGGCTGTAGCAGCTTGTTAGTACAGTTTTTGCGTCAGTGTCGCTGACTTACTTGTGGCCACACACACTTATCGCATGCAAGGGAACAATCTTGTGACACCCACGTGCTGCCGAGAGGAAAGACGTGTTGTCGTTGAAGGAAAAGTCGTCGTCGCCGTCGAACTAGTTGTCGAAGGAAGAAGAAGAAGGTTGAATCGAAGAGGAGTGACGATGCTAACGTGAAAGAAGAAGAAAGGGGCTAGGTTTTGATTCCCTTTTCTTTTCTCTTTTCCTATATCTTTCTTTACAGTTTTCGTTTAAAAAGCAAAAACCCAAATTAAAAATGAAACATATAAATATTAGATCCTAATTTAAAGTACAAATATAATTATTTTTTTTCCCCTTTAAAATAGGATATACCTTCCTTTACCATTAAAGGGCAAAAGATTTGGGAAAATAAATTATAATATTAAAACCTCGATTTTGAAATTAAAGAATTTAATAAAAACAATTCTTTTCTCAACAATTTGAGAAAGTTAATTTGACTAACTTAGTAGGCTAAACTTAGATTAGAAACGATAACTGAGAAGTCCCATTGATTTAGATTAATGGACGAAAGGGAGTTAAATGCATAATTTTAAGTTAGCATTAATTTATAATGGGGTGTTTTACACTTTAGAGCATACATCCTAACAAAACCAAACACACTCGACACGGACTTCATATTTCAGTGACTAATTTTATTATGTCAAATACTTTATTTTTTAAATCTTTATATTTAAACCTCCTTTTCTTTCTTCACTCCCCTTAAAAAAAAAAGTGTTAGGGTATAGGAAAGCTCAGGAAGCTATATATTAGAATATAATATTCTCTTATTTCTTATTTGTACAGCTGAAATTTCTTTTGAATACTATAATTCTGCCATAATTCAAGCCAATTATTTCGTATTTACTTCTTTTGATTGGTTTGAATTCTTACTCCCAGAGGTGATGTTACATCACAATTTGAGCCTCTTTTCTCCCCCTTTATTCCTTTTCTGATAGGTTTTCCTTTCTTTTCCCACATCGGAAAATTTATTGCACATATATAAAGGCCTCACAAATTTCGCGCTTCGGAAATTTCCACTCAATTTCCTCACCTCCAGAATCCAATTCCTTCCTTCATTTTATTGCTCTCAATTTCAATCTCTTGCTTTTGCCCAACCCAAATGAGCTCTACAATATGCCCTAAACCGTAAGAGAGTAATATATATTTTTATAACCTATAGTTTTATTTTCGCCCTTCGAATATTTTTTCCTTTGCGGTTAGTATAAGTAATTTTCGTCCTCTAATTTCAGTGGTTGAACAATATGGGAGGCTGGGCCAGCTCGTCTGCTAAACGGAGTAACGGCGGCGAAAAGAGTGGCAAAACGGCTGCCGTCAGGAAAGAACCGTCGCTTAAGAAAACTGACAGCCATAGCAGCGGCGGTGGCGGTGGTGGCAGCAGCCGTGGAAAGTCCTTGTGGCGGCCTGAGAAGAAGGTTTATTTTCCGAAGAAATATGGTTTCATCGCGGATAACTTCTCCTCTATTGACCAGGTTTCTCTCTCTCTCCTTTCAAAAGGAAAATATTGGTTTGGTTTAGGGCATTTTTAAATTCAACTGCTTAATTATTATTATTTTTTTCAAACAAATAAATAAATATAAACTTTTTCACCATAGTTAAAAATAAAATGTAGATGCGATGGGACCAGTAAAAGTTGGTAGTTGAGTACTCTTAAAAAAAAAATTACATTTTTAGTTATTGTTTTGAATTTGATTTCAATATAGCCTACAGATATTTAGTTTTTTAAAAATTTAAATTCGAGATATGAATTGTGTTTTAATTTAGTCTCGGGTGTATTTGACTCAAAGAGTGGAGAAGTAGGAGTTTGTGAATTTCACTCATTGTTAGGCCCAAGGAATTAATAGGTCCCGCTACTAAAAAAATATCAATTTTATATCTTATCAATACTTTACTATGTGAGCCTAAAAAATTTACAACTACCTAACTTTATAACTCATTGCTTTTCACCGTTCCACTCATTCTCTCAAATACTATTGAAATTTGGATATTTATTTAGTATCTCAATCTTTCCTTTTTTTTTTACTTTTCACATTTATCAAGTAGCTTCATATTCTTCTCTCTACTTTTCACGTTTAGTGAAGAACTTCATCGTACTACTCTACACTCCAAATACAGACTTATTAACTCCAACATTTTAACTTCATTTAATGGTGGCCCTAAGTTTCCAAATTTACTCTGAACTTTGATTTTTCACTTAATACTCAATTTTTTTGTCAAATATTTATTAATTAATTTAAATTAATTTTATGAAGTGAAATTTTAGAATAAATTTTAATAGTTATAAAAAAATAGTGAAACTTTTATCGATATTTAAAATATTAAGTGAAAAATTGAAATTAAAAGTGTAACTCTTTAAATTTAGGGACCAACTTGAAACAAAACTCAAAGCTAATGTGTAAAATTTACACTTTGCAATTCAAAGACTAAATTGAAATTAAACTCAAAATTTTTATCTGCAAATTGTCTCGTAAAATTAGTCGAAATGTGTATAAACTGGTTCGAACACTTGCATACATATATATATGTGTGTATATATATATATATATATTTATTGACCTACTGTATTAGTAAATCATTCTTTACATGTTACTTCAGTATTAAAAAAAGAAGAAAAACAAAAAGGACTGTAATTATTATTGCCTCTTGGTGGACCAGGAGACTTGACGTGTTGGAGATGAGTGGATAGAAAATTGAGATAGGTTCCTACCAGGAAATTTCCCACTACTCAGTTCTCTTCCCATTTATTATATAGTAATAATCTTGATAGCCACCCCACTTAAAACGTGTGTTTGAATTGACTTGAGAAAAAAATATTATTCAAATAATTTATTTTTATTTAAATTTTTTTGGTAAAATCTAGTTAAAAAATACTTTAAAATTTATTTTGAATGGTTGTCAAACATTTCAATTTTTTTTTTTAAAATAGCTTATTTTCAAAATTAAACACTTGAAAAGTTAATCCAAAAGGTGTTACTTCAATCCTGACACATCTTATTTCTGTTAATCATCTAACGGTTAAATAACCTCAATGACTATTTAAAACAATTATTTAAACCTTAAGGACAAAAAATGTCTATTTTAAAATCTAAGGGACTAAATAGGCATTTAACTCAAACCTTATGAACAAAAAATATATTTTTCCTTATTTATTATTGAAGTTTGCACATTTATTGAGAAACTCTATCTTTCCTTATTTATCTATTTTTTACATTTATCAAAAAACTTCATTTATAACTTTACACCCCAACACAAATTTCCTAACTTTAACACATTAATTATAGACTTCATAACTTAACTCACGCCCCAAATACTCCTTGGGGATTGAAATATTTGAATTATAGAGATCAAATGAATACCAAACTTATAACTTAGGGACCAGAAATATAATTTTTATCGAGTTGATAGTACAAATTGAATGCCAGTTTGAAACTTTTGACTTTCTAAAGTTAATTTTTTTTAGTACAACAGGAGTTAGAGATGTCCATTTTTTTAGGGAACCCACTTCGTTCATTGATTAGGTGGAGAATGGGGGAAAATCCTCGTAGGCTAAACGGGAATGGGGGCGAGGAAGCCATCCTCGACCCCGTCCCGCCTTGTGAATATCTCTAATAAGAGCAAGGCGAATTTGAACCTTAGACATCTTGGTCACAAATACATTCATATGTCAAGCTATGCTCACTTTGCTCAGTCAAAATTGTTTGCAAATATAGGTGTATATTTTGAATATTTAAAAAAAAAATACAAATCATATGTTTTAAATATTCATGTTAAAAATAAAAATTAAATCGTAAATATACTTTAATATTAAGTACAATTTATATCTGTCATTTAATATCTAATTTAATACACTAACTTGAACAAAACTCAACTAATATAATTTTTTAACTTTCAATGGAGAGGTGATAGGTTTGAATCCCTACTCTTTATATTCTTAAACTAAAAAAAATAAAAAACAATTAAACCTTTTTAAGTTCAAACTTCTAACATCAATCATTGACTCGACACTTGTAATTTGAGTTTTTAACCCTCTCAAAAGAATAATGTTTTTTCTTGAACATAAAAATGTTAAACTACAAATTGAGTCCTTAGCTTTTAGATTTGTATTTATGTGGCCATTAAACTTTTAAATGTGTCTAGTTTATATTTTAAAATTTTTAATTTTGTGTTTAGCAAATTTTCAAAAATTGAAGGACTAAATTTGTAAATTTAAAAGTTCATGGATATTTCAAAGTTTAGAGACTAGCTTCCTAATTTAACTAACAATTTACAAATTTAGCTCGATAACCATTTGGGGTTAAGGTCTCACTTAATACTATTTGGTTTTTAGTTTTAATTTTTTAAAAACTAAGCTTATAAACACGATTTCTCCTTCTATACCATAAATTTCTATATTTGTTATTCTTTTTTTACCAATGTTTTGAAAACAAAGTCAAGTTTTTAAAACTTGTTTTTGTTTTTAAGATTTGACTAGACCGAAAAAATAAAAAATACCAAACATAAATTTGAGGACAAATATAAATTTACACCTTTAAACTTTGGAGATTGTATCAATTTAAACTATGAACTAATAATTATATCAATTTAAATTGGTGAATAATTTATCAATTTACATACTATTTCAAACAAAGGGGCATTTGGCCCACTAAGTGGAGTTAATATGTTGGAGTTAACAAGTTTGTGATTAAGGTGTAGAGTTGTAAGATGAAGTTATTCGATAATTGCAAAAAGTAGATTAAGGGAGAAATATGAAGTTAATCAATAATTGTGAAAAGTATAAAAAGATGAAAATATAGAATTACTCGATAAATGTGTAAACTTTAATAGTCTTTACTATTGAAGTTGAGTTTTTTACACCAACTTAAGAAATTGGTGAGCCAAACGGCCACTTAAAGGTGTAAAATAGTATATTTCCTACATTTTAAGTATTGTTTTCAAATATAGCAAAATGGTCAATTTATTTACCATTATAGCAAAATGTCACCGTACAATTAAATATGTCCCTAGCTATCAAGACAATAAGATATCTATACTGTCCATTACTAATGGACACAGTAATATATTTACAGCAGAGTTTTTGCCAAAAAAACAATAACCCAAATTTTAATAACAGAAAGCTTAAAAGGAATTCTTATCAAAGTGGCCGTTAAATGTTGGACAAAAATTTTCGAAAAGTTTTGCGTCGCTATAATTATTAAATATTTAAATGCTGGGACGAATTTCAGAAATTTGAAATCATTCGCAGCAAGTTTCCATTCGACTGCTTCGATTAATGCATTTCATTTCTTCAATCTACAGGTTACAGCAGCCTTGAGAAAAGAAGGATTAGAATCGTCGAACCTCATCGTCGGAATTGATTTCACCAAAAGCAACGAGTGGACAGGTCTGTCGAATCAAATCAATCGCACTGTAATTTCAAACTTCTCATTCTTCGTAATTGCTTAAATCTCGGCCGATTCGGCCATCGCCATTGCTCCGCGCGCAGGTAAAGTATCGTTCAATAATCGGAGCTTGCACGCCGTTTCCGATTCTCCTAATCCCTACGAAAAGGCTCTGTCAATCATCGGCAAAACTCTGGCTCCCTTCGACGAAGACGGCTTAATTCCTTGCTTCGGTTTCGGCGACGGTACATAATTTCGCGTTTGTTTAATTCATGTCTATATTAATTGTATTTCTTGGCCGATTCATTGCCTTTGCGTCTCTGTAACTCACAGCGACGACGCACGATCAAATGGTGTTCAGTTTTCACAATGATAATTCCCCGTGCCATGGATTTGAAGAAGTTCTTGACTGCTACAAGAAGATAATTCCAAATGCGCAACTTTCAGGTTAGTGTATGATCATGTAAATGAATTTTTTCAATACTTTTGTAGATCGTGATTGTTTAAGGAATGTGATTTATAGGGCCAACTTCTTACGGTCCTGTGGTTGAAGCTGCAATGGATATTGTGGAGAAGAGTGGTGGACAATTTCATATTCTGCTCATTGTTGCAGACGGACAGGTTGATATTTCAAACTTCTTTTTTGGCTCTCTTTCATATGATTTTAAATGAATTTCATTATTTTTGTTATTGCAAAAGAAAGAATTATGGTCAAAGGAAACTTAGCTAGCTATAATTTGCATGCATTCTCTCTTCAATCAAATGTTCAGTTTTTGTCTATGTAATTGTTGGGTAAAAAAGGGAGATACAGTTTTTGTCCGTTTTGGGTATAGGTTTTATTTGGTACTTCAAAATGTTGCACTTTTTAAGTTTTTGGTTTGATTTCAATTTAGTCTCGGTTTTAAAATGTTACAATGTTAGATTTTTGTTTCAATTTGGTCTATAGGTTTCAAATTTTACCTTTTTAACATTAACATAAAAATGAAAAGTGAGTATTTAGTAAAAGATTGAGGTTAAAAGTAACTCAAATTTCAAAGGCAAAATTGTAACATTTTGAAATTTAAAGACTAAACTAAAACCAAATTTAAAACTTAAGTACTCAAAGTGTAACATTTTAAAACCTATGGACAAATTAAAAACTACACTAAAAATCTAGGGAGTAAAGGAGTATTTTTTTAAAAAACAAAAAAAATAAAAATCGTCCTACCTAACATAGGTTTAACATTTATTTAAAAAAAAAAATCTAATACTAAAATCAGATTTTTTAATAAAATATTAATAAATAGGAATCAAAAGGGAAAATTTTTAGGGCTATTTTTCAAATATAGAAAAATAAGTCAAACTATTTACAAATATAGAAAAAATGTCAAACTATTTAAAAAAAAATAGACATTAATAGATTTCTATCAGCTTCTATCATTTTCACTAACATTAATACGTCTTATCACTTTACAACTATCTAAAAGATTTTACTATTTTAGGTAAATAGTTTTCCTTATTTTTCTATTTTTAAAAATTCCCCAATTAAAAGCTTGCACATTATTAAACTTTCTATTATTATTCTATTTTCAGTTGCCTTCGACACACAAAATTCTAGCTACATACATTTCAAGTTTTTTTTAGTTACAAACGAGATTTAATTGGAAAAAAAAAAATCAAAACCATTTTTCAGATTTCAAATTTATTGTACCTTCAAACAGAGCGTAAAAGACTTTATTTGTGGCAAAGGTTACTCGAAGCTCCAGTGTTGGCGATGGTGAATTGAGCGTTCAAGAGGAGAAAACAATCAAAGCAATTGTCGATGCAAGGTGGAGGAAAAAAAAAAAAAACCCTTAGATTTGTATCATATAATTTCATTGCAGATTTTGAGATATTGTCTTATTCTTTCCATCCAGTGCATATCCTCTTTCGATTATTCTTGTTGGAGTTGGAGATGGCCCTTGGGACGACATGAAGAAGTTCGACGACAAGATCCCAGCACGGGATTTCGATAATTTTCAGGTTTCATAGCAATCCAAGTACGACTTGGATCAGTTGAGTTAAATTCAATCCTAAACATCAGCAGAATCACTTTCTGATCTTGCATTTTTCCTAATAACTATGTGCAGTTTGTTAACTTCACTGAAATAATGTCGAAAAACATCGACACGTCTGAAAAAGAAGCAGCTTTTGCTTTAGCTGCACTTATGGAGGTTCCGTTCCAGTACAAAGCAGTAACAGAAGTTGGTCTTATAGGGTAGAGATCTCACTCTTCTAATATTGCCCCTTCCATTACATTGAGTTTTCAATAGATTCAACTGTTTCTCCTAAGGTTAGCTCTGGCTGGAATGGCTTATTACTCACTACTAACTCTGCTTCTTTTGATGTGGAGCCAAGGCACGTGACAGGAAAAACAAAACGCATTGTGCCACGACCCCCACCGACACGTTATATTCGTCCGGCACAACTTACTCCCATACCTAGCAACTCCTCAGCTTCTGCATCTGATGAACAAAGTCAAGTATGTTCTAGCAATATTTTTTTAAAGCTCAAAGCATAATAAAATACAATAGTCTTTTAGGGCTTAAGTGTAAGGCGCAAAAAATGTTTACATAAAGAAGAGAAAACATAGTTAAAATGGAAATATGAAAAAAAGACCCCTGAACACAAGAAATTTTAAATTTAGACTAAGTAAATTTGATTTTTTTTAGTTAAAAAAGAGGAAAAAAACCCTTATTACTATTTTAAAACATAATGAAAAAACCCAAGGCTCGGCCTTTGAGCTTAGGCGTACGTCAAAGAGGGCTTTTTAAAACACCGTGTTCTGGTGGGGAACTTGCGACACATTCCTTTGCTTGCTTCTTACTCTGTATAATTCAAGGGTTTCACTATTGCTTCCAAATAATGTATAGAAACAATAACATTATTTCCAACTCAAATGCAGGTCTGCCCCATTTGCTTGACCGCGGGAAAGGACTTGGCCTTTGGATGCGGCCACATGGTTGAGAGATTGAACTACTTAATATCTACTAAACAATTCTTTATTCACTACTTCAAAGAATTCATCTGCATGTACATTATGAGATAATATACATAAATAAACAAAATATGAACCAGTGGATCTTTTTCCATCACATTTTATACCATTCCTACTTGTTGCAACCTCTTAATACACACACATCTACTAACATTCAAACATTGCAGACCTGTAGGGAATGTGGATCAAGATTGTCCAATTGCCATATATGTCGCCAGCCTATCAGAAACCGAATAAGGCTATATACTGGGTGATCAGATCGCACCAAGGGGTTAGTGAGATGATGTCGATGACAATCAGACGGATATGATGTACAAGAATCCAGGGTTAGAAAAAACAATGTGGGTGATCAAATGTATGTTGTATGGACAGAACTAGGATTGTTTTACTTCTGGATTTTGTGTGTGCGTGTGCGGTGAGGTTCAAATTCCCAATGGAAGAGGACCCTGATGTACATAGAAAAAACAATGTGGTCCTACTATGTAATTGTAAAAACAATGCAGTATCGGCCCTTTTCAATATTTTGTGACGAAGACAAGATTTCGTATGCTTACACGTAAGCTTCTTTTAAATACTACTAGTTGCAACGTACAAGCTCGACAGAGTTGACATTAGCTCGACAGAGTTTGTCAAGAGCAATATTTGAGTATATCTTAGACTATATTTTGAAAGTATTTGGCCCACCAACTT

mRNA sequence

ATGGGTGTTCACAGTCCTTCGAAGTCGAAAATCGAGTGTTCAAAGTCTGTCGAAGTTCGCTATGGTGGCCATCGGTCACATTCCATCGAAGGAGTCGCGTGGTTGAACAATATGGGAGGCTGGGCCAGCTCGTCTGCTAAACGGAGTAACGGCGGCGAAAAGAGTGGCAAAACGGCTGCCGTCAGGAAAGAACCGTCGCTTAAGAAAACTGACAGCCATAGCAGCGGCGGTGGCGGTGGTGGCAGCAGCCGTGGAAAGTCCTTGTGGCGGCCTGAGAAGAAGGTTTATTTTCCGAAGAAATATGGTTTCATCGCGGATAACTTCTCCTCTATTGACCAGGTTACAGCAGCCTTGAGAAAAGAAGGATTAGAATCGTCGAACCTCATCGTCGGAATTGATTTCACCAAAAGCAACGAGTGGACAGGTAAAGTATCGTTCAATAATCGGAGCTTGCACGCCGTTTCCGATTCTCCTAATCCCTACGAAAAGGCTCTGTCAATCATCGGCAAAACTCTGGCTCCCTTCGACGAAGACGGCTTAATTCCTTGCTTCGGTTTCGGCGACGCGACGACGCACGATCAAATGGTGTTCAGTTTTCACAATGATAATTCCCCGTGCCATGGATTTGAAGAAGTTCTTGACTGCTACAAGAAGATAATTCCAAATGCGCAACTTTCAGGGCCAACTTCTTACGGTCCTGTGGTTGAAGCTGCAATGGATATTGTGGAGAAGAGTGGTGGACAATTTCATATTCTGCTCATTGTTGCAGACGGACAGCTCCAGTGTTGGCGATGTGCATATCCTCTTTCGATTATTCTTGTTGGAGTTGGAGATGGCCCTTGGGACGACATGAAGAAGTTCGACGACAAGATCCCAGCACGGGATTTCGATAATTTTCAGTTTGTTAACTTCACTGAAATAATGTCGAAAAACATCGACACGTCTGAAAAAGAAGCAGCTTTTGCTTTAGCTGCACTTATGGAGGTTCCGTTCCAGTACAAAGCAGTAACAGAAGTTGGTCTTATAGGGTAGAGATCTCACTCTTCTAATATTGCCCCTTCCATTACATTGAGTTTTCAATAGATTCAACTGTTTCTCCTAAGGTTAGCTCTGGCTGGAATGGCTTATTACTCACTACTAACTCTGCTTCTTTTGATGTGGAGCCAAGGCACGTGACAGGAAAAACAAAACGCATTGTGCCACGACCCCCACCGACACGTTATATTCGTCCGGCACAACTTACTCCCATACCTAGCAACTCCTCAGCTTCTGCATCTGATGAACAAAGTCAAGTATGTTCTAGCAATATTTTTTTAAAGCTCAAAGCATAATAAAATACAATAGTCTTTTAGGGCTTAAGTGTAAGGCGCAAAAAATGTTTACATAAAGAAGAGAAAACATAGTTAAAATGGAAATATGAAAAAAAGACCCCTGAACACAAGAAATTTTAAATTTAGACTAAGTAAATTTGATTTTTTTTAGTTAAAAAAGAGGAAAAAAACCCTTATTACTATTTTAAAACATAATGAAAAAACCCAAGGCTCGGCCTTTGAGCTTAGGCGTACGTCAAAGAGGGCTTTTTAAAACACCGTGTTCTGGTGGGGAACTTGCGACACATTCCTTTGCTTGCTTCTTACTCTGTATAATTCAAGGGTTTCACTATTGCTTCCAAATAATGTATAGAAACAATAACATTATTTCCAACTCAAATGCAGGTCTGCCCCATTTGCTTGACCGCGGGAAAGGACTTGGCCTTTGGATGCGGCCACATGGTTGAGAGATTGAACTACTTAATATCTACTAAACAATTCTTTATTCACTACTTCAAAGAATTCATCTGCATGTACATTATGAGATAATATACATAAATAAACAAAATATGAACCAGTGGATCTTTTTCCATCACATTTTATACCATTCCTACTTGTTGCAACCTCTTAATACACACACATCTACTAACATTCAAACATTGCAGACCTGTAGGGAATGTGGATCAAGATTGTCCAATTGCCATATATGTCGCCAGCCTATCAGAAACCGAATAAGGCTATATACTGGGTGATCAGATCGCACCAAGGGGTTAGTGAGATGATGTCGATGACAATCAGACGGATATGATGTACAAGAATCCAGGGTTAGAAAAAACAATGTGGGTGATCAAATGTATGTTGTATGGACAGAACTAGGATTGTTTTACTTCTGGATTTTGTGTGTGCGTGTGCGGTGAGGTTCAAATTCCCAATGGAAGAGGACCCTGATGTACATAGAAAAAACAATGTGGTCCTACTATGTAATTGTAAAAACAATGCAGTATCGGCCCTTTTCAATATTTTGTGACGAAGACAAGATTTCGTATGCTTACACGTAAGCTTCTTTTAAATACTACTAGTTGCAACGTACAAGCTCGACAGAGTTGACATTAGCTCGACAGAGTTTGTCAAGAGCAATATTTGAGTATATCTTAGACTATATTTTGAAAGTATTTGGCCCACCAACTT

Coding sequence (CDS)

ATGGGTGTTCACAGTCCTTCGAAGTCGAAAATCGAGTGTTCAAAGTCTGTCGAAGTTCGCTATGGTGGCCATCGGTCACATTCCATCGAAGGAGTCGCGTGGTTGAACAATATGGGAGGCTGGGCCAGCTCGTCTGCTAAACGGAGTAACGGCGGCGAAAAGAGTGGCAAAACGGCTGCCGTCAGGAAAGAACCGTCGCTTAAGAAAACTGACAGCCATAGCAGCGGCGGTGGCGGTGGTGGCAGCAGCCGTGGAAAGTCCTTGTGGCGGCCTGAGAAGAAGGTTTATTTTCCGAAGAAATATGGTTTCATCGCGGATAACTTCTCCTCTATTGACCAGGTTACAGCAGCCTTGAGAAAAGAAGGATTAGAATCGTCGAACCTCATCGTCGGAATTGATTTCACCAAAAGCAACGAGTGGACAGGTAAAGTATCGTTCAATAATCGGAGCTTGCACGCCGTTTCCGATTCTCCTAATCCCTACGAAAAGGCTCTGTCAATCATCGGCAAAACTCTGGCTCCCTTCGACGAAGACGGCTTAATTCCTTGCTTCGGTTTCGGCGACGCGACGACGCACGATCAAATGGTGTTCAGTTTTCACAATGATAATTCCCCGTGCCATGGATTTGAAGAAGTTCTTGACTGCTACAAGAAGATAATTCCAAATGCGCAACTTTCAGGGCCAACTTCTTACGGTCCTGTGGTTGAAGCTGCAATGGATATTGTGGAGAAGAGTGGTGGACAATTTCATATTCTGCTCATTGTTGCAGACGGACAGCTCCAGTGTTGGCGATGTGCATATCCTCTTTCGATTATTCTTGTTGGAGTTGGAGATGGCCCTTGGGACGACATGAAGAAGTTCGACGACAAGATCCCAGCACGGGATTTCGATAATTTTCAGTTTGTTAACTTCACTGAAATAATGTCGAAAAACATCGACACGTCTGAAAAAGAAGCAGCTTTTGCTTTAGCTGCACTTATGGAGGTTCCGTTCCAGTACAAAGCAGTAACAGAAGTTGGTCTTATAGGGTAG

Protein sequence

MGVHSPSKSKIECSKSVEVRYGGHRSHSIEGVAWLNNMGGWASSSAKRSNGGEKSGKTAAVRKEPSLKKTDSHSSGGGGGGSSRGKSLWRPEKKVYFPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAVSDSPNPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKKIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQLQCWRCAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIDTSEKEAAFALAALMEVPFQYKAVTEVGLIG

Homology

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BLAST of Lsi10G015050 vs. ExPASy Swiss-Prot
Match: Q9SAL0 (E3 ubiquitin-protein ligase RGLG4 OS=Arabidopsis thaliana OX=3702 GN=RGLG4 PE=1 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 2.0e-101
Identity = 174/266 (65.41%), Postives = 211/266 (79.32%), Query Frame = 0


Query: 99  KKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAVSDSP 158
           KKY  I D FSS+DQV+ ALR+ GLESSNLI+G+DFTKSNEWTGK SF+ + LHA+ ++ 
Sbjct: 51  KKYALIPDRFSSLDQVSKALREAGLESSNLILGVDFTKSNEWTGKTSFDGKCLHALGETS 110

Query: 159 NPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKK 218
           NPYEKA+ +IG+TLAPFDED LIPCFGFGD+TTHD+ VF FH+DNSPCHGFEEVL CYK+
Sbjct: 111 NPYEKAIFVIGQTLAPFDEDNLIPCFGFGDSTTHDEEVFGFHSDNSPCHGFEEVLACYKR 170

Query: 219 IIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQLQ----------------- 278
           I PN +LSGPTSYGP+++AA+DIVEK+ GQFH+L+IVADGQ+                  
Sbjct: 171 IAPNLRLSGPTSYGPLIDAAVDIVEKNNGQFHVLVIVADGQVTRGTDMAEGELSQQEKTT 230

Query: 279 ----CWRCAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIDTSEK 338
                   +Y LSI+LVGVGDGPW+DM+KFDDKIP R+FDNFQFVNFTEIM++N   S K
Sbjct: 231 IDAIVNASSYALSIVLVGVGDGPWEDMRKFDDKIPKREFDNFQFVNFTEIMTRNSPESAK 290

Query: 339 EAAFALAALMEVPFQYKAVTEVGLIG 344
           E AFALAALME+PFQY+A  E+ L+G
Sbjct: 291 ETAFALAALMEIPFQYQAAIELRLLG 316

[Close]

BLAST of Lsi10G015050 vs. ExPASy Swiss-Prot
Match: Q8LB88 (E3 ubiquitin-protein ligase RGLG5 OS=Arabidopsis thaliana OX=3702 GN=RGLG5 PE=1 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.0e-93
Identity = 180/335 (53.73%), Postives = 228/335 (68.06%), Query Frame = 0


Query: 38  MGGWASSSAKRSNGGEK--------SGKTAAVRKEPSLKKTDSHSSGGGGGGSSRGKSLW 97
           MGG +S  + R  G  +        S   ++   + S  +T +H S       + G+   
Sbjct: 1   MGGSSSKESPRGGGSGRRYERSVSGSSSYSSAWDQSSYYQTPNHPSASPVSSYNSGR--- 60

Query: 98  RPEKKVYFPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNR 157
             +      +KY  IADN+ SID+VTAAL   GLESSNLIVGID TKSNEWTG  SF  +
Sbjct: 61  --QTPKNLERKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGRK 120

Query: 158 SLHAVSDSPNPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGF 217
           SLH +  +PNPY++A+SIIGKTL+ FDED LIPC+GFGDATTHDQ VFSF+ +++ C+GF
Sbjct: 121 SLHFIGTTPNPYQQAISIIGKTLSVFDEDNLIPCYGFGDATTHDQDVFSFNPNDTYCNGF 180

Query: 218 EEVLDCYKKIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQLQ-------- 277
           EEVL CY++I+P  +LSGPTS+ P++E AM IVE+SGGQ+H+LLI+ADGQ+         
Sbjct: 181 EEVLMCYREIVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDNG 240

Query: 278 -------------CWRCAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIM 337
                             YPLSI+LVGVGDGPWD M++FDD IPAR FDNFQFVNFT+IM
Sbjct: 241 GFSPQEQQTIDAIVRASEYPLSIVLVGVGDGPWDTMRQFDDNIPARAFDNFQFVNFTDIM 300

Query: 338 SKNIDTSEKEAAFALAALMEVPFQYKAVTEVGLIG 344
           SKNID + KEA FAL+ALME+P QYKA  E+GL+G
Sbjct: 301 SKNIDPARKEAEFALSALMEIPSQYKATLELGLLG 330

[Close]

BLAST of Lsi10G015050 vs. ExPASy Swiss-Prot
Match: Q9SS90 (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana OX=3702 GN=RGLG1 PE=1 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.3e-89
Identity = 160/268 (59.70%), Postives = 202/268 (75.37%), Query Frame = 0


Query: 97  FPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAVSD 156
           F ++Y  I+DN+SS+ QV+ AL + GLESSNLIVGIDFTKSNEWTG  SFN +SLH +S+
Sbjct: 126 FDRRYSKISDNYSSLLQVSEALGRAGLESSNLIVGIDFTKSNEWTGAKSFNRKSLHHLSN 185

Query: 157 SPNPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCY 216
           +PNPYE+A++IIG+TLA FDED LIPC+GFGDA+THDQ VFSF+ +   C+GFEEVL  Y
Sbjct: 186 TPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEGRFCNGFEEVLARY 245

Query: 217 KKIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQLQ--------------- 276
           ++I+P  +L+GPTS+ P++E AM +VE+S GQ+H+L+I+ADGQ+                
Sbjct: 246 REIVPQLKLAGPTSFAPIIEMAMTVVEQSSGQYHVLVIIADGQVTRSVDTEHGRLSPQEQ 305

Query: 277 ------CWRCAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIDTS 336
                       PLSI+LVGVGDGPWD M++FDD IPAR FDNFQFVNFTEIMSKN D S
Sbjct: 306 KTVDAIVKASTLPLSIVLVGVGDGPWDMMQEFDDNIPARAFDNFQFVNFTEIMSKNKDQS 365

Query: 337 EKEAAFALAALMEVPFQYKAVTEVGLIG 344
            KE  FAL+ALME+P QYKA  E+ L+G
Sbjct: 366 RKETEFALSALMEIPPQYKATIELNLLG 393

[Close]

BLAST of Lsi10G015050 vs. ExPASy Swiss-Prot
Match: Q9LY87 (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana OX=3702 GN=RGLG2 PE=1 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 5.1e-89
Identity = 166/300 (55.33%), Postives = 213/300 (71.00%), Query Frame = 0


Query: 65  PSLKKTDSHSSGGGGGGSSRGKSLWRPEKKVYFPKKYGFIADNFSSIDQVTAALRKEGLE 124
           P L  T  +S+       S+    +  + K    +KY  I+D++SS++QVT AL + GLE
Sbjct: 63  PPLYSTQPYSAPSYSAPPSQS---YGSDNKKRLERKYSKISDDYSSLEQVTEALARAGLE 122

Query: 125 SSNLIVGIDFTKSNEWTGKVSFNNRSLHAVSDSPNPYEKALSIIGKTLAPFDEDGLIPCF 184
           SSNLIVGIDFTKSNEWTG  SFN +SLH +  SPNPYE+A++IIG+TLA FDED LIPC+
Sbjct: 123 SSNLIVGIDFTKSNEWTGARSFNRKSLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCY 182

Query: 185 GFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKKIIPNAQLSGPTSYGPVVEAAMDIVEK 244
           GFGDA+THDQ VFSF++++  C+GFEEVL  YK+I+P  +L+GPTS+ P+++ AM IVE+
Sbjct: 183 GFGDASTHDQDVFSFNSEDRFCNGFEEVLSRYKEIVPQLKLAGPTSFAPIIDMAMTIVEQ 242

Query: 245 SGGQFHILLIVADGQLQ---------------------CWRCAYPLSIILVGVGDGPWDD 304
           SGGQ+H+L+I+ADGQ+                            PLSI+LVGVGDGPWD 
Sbjct: 243 SGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVGDGPWDM 302

Query: 305 MKKFDDKIPARDFDNFQFVNFTEIMSKNIDTSEKEAAFALAALMEVPFQYKAVTEVGLIG 344
           M++FDD IPAR FDNFQFVNFTEIM+KN   S KE  FAL+ALME+P QYKA  E+ L+G
Sbjct: 303 MREFDDNIPARAFDNFQFVNFTEIMAKNKAQSLKETEFALSALMEIPQQYKATIELNLLG 359

[Close]

BLAST of Lsi10G015050 vs. ExPASy Swiss-Prot
Match: Q8RX26 (E3 ubiquitin-protein ligase RGLG3 OS=Arabidopsis thaliana OX=3702 GN=RGLG3 PE=1 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.5e-88
Identity = 155/254 (61.02%), Postives = 196/254 (77.17%), Query Frame = 0


Query: 103 FIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAVSDSPNPYE 162
           +IAD+FSS+DQV  +LR+ GLESSNLI+GIDFTKSNEWTG+ SFN +SLHA+    NPYE
Sbjct: 13  YIADHFSSLDQVITSLREAGLESSNLILGIDFTKSNEWTGRYSFNRKSLHAIGKRQNPYE 72

Query: 163 KALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKKIIPN 222
           KA+SIIG+TL+PFDED LIPCFGFGD TT DQ VFSF+ +N  C G E  +  Y++I+P+
Sbjct: 73  KAISIIGRTLSPFDEDDLIPCFGFGDVTTRDQYVFSFYPENKSCDGLENAVKRYREIVPH 132

Query: 223 AQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQLQ--------------------- 282
            +LSGPTS+ PV++AA++IVE++  Q+H+L+I+ADGQ+                      
Sbjct: 133 LKLSGPTSFAPVIDAAINIVEQNNMQYHVLVIIADGQVTRNPDVPLGRLSPQEEATMNSI 192

Query: 283 CWRCAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIDTSEKEAAF 336
                YPLSI+LVGVGDGPWD MK+FDD IP R+FDNFQFVNFT+IMS++ D ++KEAAF
Sbjct: 193 MAASHYPLSIVLVGVGDGPWDTMKQFDDNIPHREFDNFQFVNFTKIMSEHKDAAKKEAAF 252

[Close]

BLAST of Lsi10G015050 vs. ExPASy TrEMBL
Match: A0A1S3C2F8 (E3 ubiquitin-protein ligase RGLG2 OS=Cucumis melo OX=3656 GN=LOC103496272 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 2.4e-150
Identity = 277/333 (83.18%), Postives = 288/333 (86.49%), Query Frame = 0


Query: 32  VAWLNNMGGWASSSAKRSNGGEKSGKTAAVRKEPSLKKTDSHSSGGGGGGSSRGKSLWRP 91
           + WL+NMG   SSSAKRS+GG K GKTAAV KE S++K+D     GGGGGSSRGKSLWRP
Sbjct: 3   LTWLSNMGNRVSSSAKRSDGGVKGGKTAAVGKEASVQKSD-----GGGGGSSRGKSLWRP 62

Query: 92  EKKVYFPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSL 151
            KKV FPKKYGFIADNFSSIDQVT+ALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSL
Sbjct: 63  GKKVDFPKKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSL 122

Query: 152 HAVSDSPNPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEE 211
           HA+SDSPNPY+KALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEE
Sbjct: 123 HALSDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEE 182

Query: 212 VLDCYKKIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQLQ---------- 271
           VLDCYK IIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQ+           
Sbjct: 183 VLDCYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGEL 242

Query: 272 -----------CWRCAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSK 331
                          AYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSK
Sbjct: 243 SVQEERTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSK 302

Query: 332 NIDTSEKEAAFALAALMEVPFQYKAVTEVGLIG 344
           NI   EKEAAFALAALMEVPFQYKAVTE+GLIG
Sbjct: 303 NIGVPEKEAAFALAALMEVPFQYKAVTEMGLIG 330

[Close]

BLAST of Lsi10G015050 vs. ExPASy TrEMBL
Match: A0A0A0KG96 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G135420 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.5e-149
Identity = 274/333 (82.28%), Postives = 288/333 (86.49%), Query Frame = 0


Query: 32  VAWLNNMGGWASSSAKRSNGGEKSGKTAAVRKEPSLKKTDSHSSGGGGGGSSRGKSLWRP 91
           + WL+NMG   SSSAKRSNGG KSGKT  V KE S+KK+DS     GGGGSSRGKSLWRP
Sbjct: 3   LTWLSNMGSRVSSSAKRSNGGVKSGKTGGVGKEASVKKSDS-----GGGGSSRGKSLWRP 62

Query: 92  EKKVYFPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSL 151
           E KV FPKKYGFIADNFSS+DQVT+ALRKEGLESSNLIVGIDFTKSNEWTG VSFN RSL
Sbjct: 63  ETKVNFPKKYGFIADNFSSVDQVTSALRKEGLESSNLIVGIDFTKSNEWTGAVSFNKRSL 122

Query: 152 HAVSDSPNPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEE 211
           HA+SDSPNPY+KALSIIGKTLAPFDEDGLIPCFGFGDATTHDQ+VFSFHNDNSPCHGFEE
Sbjct: 123 HALSDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQLVFSFHNDNSPCHGFEE 182

Query: 212 VLDCYKKIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQL---QCWR---- 271
           VLDCYK IIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQ+     +R    
Sbjct: 183 VLDCYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSLFRDGEL 242

Query: 272 --------------CAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSK 331
                          AYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSK
Sbjct: 243 SAQEEKTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSK 302

Query: 332 NIDTSEKEAAFALAALMEVPFQYKAVTEVGLIG 344
           NI  +EKEAAFALAALMEVPFQYKAVTE+GL+G
Sbjct: 303 NIGVAEKEAAFALAALMEVPFQYKAVTEMGLMG 330

[Close]

BLAST of Lsi10G015050 vs. ExPASy TrEMBL
Match: A0A6J1G650 (E3 ubiquitin-protein ligase RGLG4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451227 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 8.0e-130
Identity = 254/373 (68.10%), Postives = 269/373 (72.12%), Query Frame = 0


Query: 33  AWLNNMGGWASSSAKRSNGGEKSGKTAA------------------VRKEPSLKKTDSHS 92
           AW +NMG   SSS+KRS GGEK  K A+                     EPS+K T   S
Sbjct: 5   AWFSNMGSLVSSSSKRSGGGEKPAKAASEPSFGGRGGGGGGEKPAKTAAEPSVKSTVRRS 64

Query: 93  -----------------------SGGGGGGSSRGKSLWRPEKKVYFPKKYGFIADNFSSI 152
                                   GGGGGG  RGK     EKK  F +KYGFIADNFSSI
Sbjct: 65  IGGGGEKPGKMAAQPSVKNMGGGGGGGGGGRGRGKGSRLSEKKASFRQKYGFIADNFSSI 124

Query: 153 DQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAVSDSPNPYEKALSIIGKT 212
           DQVT ALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLH+VSDSPNPYEKALSIIG+T
Sbjct: 125 DQVTEALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHSVSDSPNPYEKALSIIGRT 184

Query: 213 LAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKKIIPNAQLSGPTSY 272
           LAPFD+DGLIPCFGFGDATTHDQ VFSFHNDNSPCHGFEEVLDCYK+IIPN QLSGPTSY
Sbjct: 185 LAPFDDDGLIPCFGFGDATTHDQEVFSFHNDNSPCHGFEEVLDCYKRIIPNVQLSGPTSY 244

Query: 273 GPVVEAAMDIVEKSGGQFHILLIVADGQLQ---------------------CWRCAYPLS 332
             VVEAAM+IVEKS GQFHILLIVADGQ+                          AYPLS
Sbjct: 245 ASVVEAAMNIVEKSNGQFHILLIVADGQVTRGSSVGDAELSVQEEKTIKAIVDASAYPLS 304

Query: 333 IILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIDTSEKEAAFALAALMEVP 344
           IILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMS+N+ T EKEAAFALAALMEVP
Sbjct: 305 IILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSRNVATPEKEAAFALAALMEVP 364

[Close]

BLAST of Lsi10G015050 vs. ExPASy TrEMBL
Match: A0A6J1G665 (E3 ubiquitin-protein ligase RGLG4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451227 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 8.0e-130
Identity = 254/373 (68.10%), Postives = 269/373 (72.12%), Query Frame = 0


Query: 33  AWLNNMGGWASSSAKRSNGGEKSGKTAA------------------VRKEPSLKKTDSHS 92
           AW +NMG   SSS+KRS GGEK  K A+                     EPS+K T   S
Sbjct: 5   AWFSNMGSLVSSSSKRSGGGEKPAKAASEPSFGGRGGGGGGEKPAKTAAEPSVKSTVRRS 64

Query: 93  -----------------------SGGGGGGSSRGKSLWRPEKKVYFPKKYGFIADNFSSI 152
                                   GGGGGG  RGK     EKK  F +KYGFIADNFSSI
Sbjct: 65  IGGGGEKPGKMAAQPSVKNMGGGGGGGGGGRGRGKGSRLSEKKASFRQKYGFIADNFSSI 124

Query: 153 DQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAVSDSPNPYEKALSIIGKT 212
           DQVT ALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLH+VSDSPNPYEKALSIIG+T
Sbjct: 125 DQVTEALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHSVSDSPNPYEKALSIIGRT 184

Query: 213 LAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKKIIPNAQLSGPTSY 272
           LAPFD+DGLIPCFGFGDATTHDQ VFSFHNDNSPCHGFEEVLDCYK+IIPN QLSGPTSY
Sbjct: 185 LAPFDDDGLIPCFGFGDATTHDQEVFSFHNDNSPCHGFEEVLDCYKRIIPNVQLSGPTSY 244

Query: 273 GPVVEAAMDIVEKSGGQFHILLIVADGQLQ---------------------CWRCAYPLS 332
             VVEAAM+IVEKS GQFHILLIVADGQ+                          AYPLS
Sbjct: 245 ASVVEAAMNIVEKSNGQFHILLIVADGQVTRGSSVGDAELSVQEEKTIKAIVDASAYPLS 304

Query: 333 IILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIDTSEKEAAFALAALMEVP 344
           IILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMS+N+ T EKEAAFALAALMEVP
Sbjct: 305 IILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSRNVATPEKEAAFALAALMEVP 364

[Close]

BLAST of Lsi10G015050 vs. ExPASy TrEMBL
Match: A0A6J1KZS5 (E3 ubiquitin-protein ligase RGLG4 OS=Cucurbita maxima OX=3661 GN=LOC111499741 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 8.9e-129
Identity = 253/369 (68.56%), Postives = 267/369 (72.36%), Query Frame = 0


Query: 33  AWLNNMGGWASSSAKRSNGGEKSGKTAA-------------------VRKEPSLKKTDSH 92
           AW +NMG   SSS+KRS GGEK  K A+                      EPSLK T   
Sbjct: 5   AWFSNMGSLISSSSKRSGGGEKPAKAASEPSLKNTESVIGGGDKPGKTAAEPSLKSTVRR 64

Query: 93  SSG------------------GGGGGSSRGKSLWRPEKKVYFPKKYGFIADNFSSIDQVT 152
           S G                  G GGG  RGK     EKK  F +KYGFIADNFSSIDQVT
Sbjct: 65  SIGVGGEKPGKMTTEPSVKNMGSGGGGGRGKGSRLSEKKASFRQKYGFIADNFSSIDQVT 124

Query: 153 AALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAVSDSPNPYEKALSIIGKTLAPF 212
            ALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLH+VSDSPNPYEKALSIIG+TLAPF
Sbjct: 125 EALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHSVSDSPNPYEKALSIIGRTLAPF 184

Query: 213 DEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKKIIPNAQLSGPTSYGPVV 272
           D+DGLIPCFGFGDATTHDQ VFSFHNDNSPCHGFEEVLDCYK+IIPN QLSGPTSY  VV
Sbjct: 185 DDDGLIPCFGFGDATTHDQEVFSFHNDNSPCHGFEEVLDCYKRIIPNVQLSGPTSYASVV 244

Query: 273 EAAMDIVEKSGGQFHILLIVADGQLQ---------------------CWRCAYPLSIILV 332
           EAAM+IVEKS GQFHILLIVADGQ+                          AY LSIILV
Sbjct: 245 EAAMNIVEKSNGQFHILLIVADGQVTRGSSVGDGELSVQEEKTIKAIVDASAYALSIILV 304

Query: 333 GVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIDTSEKEAAFALAALMEVPFQYK 344
           GVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMS+N+ T EKEAAFALAALMEVP QYK
Sbjct: 305 GVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSRNVATPEKEAAFALAALMEVPLQYK 364

[Close]

BLAST of Lsi10G015050 vs. NCBI nr
Match: XP_008456279.1 (PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Cucumis melo])

HSP 1 Score: 541.6 bits (1394), Expect = 5.0e-150
Identity = 277/333 (83.18%), Postives = 288/333 (86.49%), Query Frame = 0


Query: 32  VAWLNNMGGWASSSAKRSNGGEKSGKTAAVRKEPSLKKTDSHSSGGGGGGSSRGKSLWRP 91
           + WL+NMG   SSSAKRS+GG K GKTAAV KE S++K+D     GGGGGSSRGKSLWRP
Sbjct: 3   LTWLSNMGNRVSSSAKRSDGGVKGGKTAAVGKEASVQKSD-----GGGGGSSRGKSLWRP 62

Query: 92  EKKVYFPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSL 151
            KKV FPKKYGFIADNFSSIDQVT+ALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSL
Sbjct: 63  GKKVDFPKKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSL 122

Query: 152 HAVSDSPNPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEE 211
           HA+SDSPNPY+KALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEE
Sbjct: 123 HALSDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEE 182

Query: 212 VLDCYKKIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQLQ---------- 271
           VLDCYK IIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQ+           
Sbjct: 183 VLDCYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGEL 242

Query: 272 -----------CWRCAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSK 331
                          AYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSK
Sbjct: 243 SVQEERTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSK 302

Query: 332 NIDTSEKEAAFALAALMEVPFQYKAVTEVGLIG 344
           NI   EKEAAFALAALMEVPFQYKAVTE+GLIG
Sbjct: 303 NIGVPEKEAAFALAALMEVPFQYKAVTEMGLIG 330

[Close]

BLAST of Lsi10G015050 vs. NCBI nr
Match: XP_004139915.2 (E3 ubiquitin-protein ligase RGLG4 [Cucumis sativus] >KGN46786.1 hypothetical protein Csa_021092 [Cucumis sativus])

HSP 1 Score: 537.7 bits (1384), Expect = 7.2e-149
Identity = 274/333 (82.28%), Postives = 288/333 (86.49%), Query Frame = 0


Query: 32  VAWLNNMGGWASSSAKRSNGGEKSGKTAAVRKEPSLKKTDSHSSGGGGGGSSRGKSLWRP 91
           + WL+NMG   SSSAKRSNGG KSGKT  V KE S+KK+DS     GGGGSSRGKSLWRP
Sbjct: 3   LTWLSNMGSRVSSSAKRSNGGVKSGKTGGVGKEASVKKSDS-----GGGGSSRGKSLWRP 62

Query: 92  EKKVYFPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSL 151
           E KV FPKKYGFIADNFSS+DQVT+ALRKEGLESSNLIVGIDFTKSNEWTG VSFN RSL
Sbjct: 63  ETKVNFPKKYGFIADNFSSVDQVTSALRKEGLESSNLIVGIDFTKSNEWTGAVSFNKRSL 122

Query: 152 HAVSDSPNPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEE 211
           HA+SDSPNPY+KALSIIGKTLAPFDEDGLIPCFGFGDATTHDQ+VFSFHNDNSPCHGFEE
Sbjct: 123 HALSDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQLVFSFHNDNSPCHGFEE 182

Query: 212 VLDCYKKIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQL---QCWR---- 271
           VLDCYK IIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQ+     +R    
Sbjct: 183 VLDCYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSLFRDGEL 242

Query: 272 --------------CAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSK 331
                          AYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSK
Sbjct: 243 SAQEEKTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSK 302

Query: 332 NIDTSEKEAAFALAALMEVPFQYKAVTEVGLIG 344
           NI  +EKEAAFALAALMEVPFQYKAVTE+GL+G
Sbjct: 303 NIGVAEKEAAFALAALMEVPFQYKAVTEMGLMG 330

[Close]

BLAST of Lsi10G015050 vs. NCBI nr
Match: XP_038901341.1 (E3 ubiquitin-protein ligase RGLG4 [Benincasa hispida])

HSP 1 Score: 537.3 bits (1383), Expect = 9.4e-149
Identity = 275/328 (83.84%), Postives = 285/328 (86.89%), Query Frame = 0


Query: 38  MGGWASSSAKRSNGGEKSGKTAAVRKE-PSLKKTDSHSSGGGGGGSSRGKSLWRPEKKVY 97
           MGGWASSSAKR NGGEK GKTAAV KE PSLKKTD   SG GGGGSSRGKSL RPEKKVY
Sbjct: 1   MGGWASSSAKRRNGGEKGGKTAAVSKEPPSLKKTD---SGSGGGGSSRGKSLCRPEKKVY 60

Query: 98  FPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAVSD 157
           FPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVG+DFTKSNEWTGKVSFNNRSLHAVSD
Sbjct: 61  FPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGMDFTKSNEWTGKVSFNNRSLHAVSD 120

Query: 158 SPNPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCY 217
           SPNPYE ALSIIGKTLAPFD+D LIPCFGFGDATTHDQ VF FH+DN+PCHGFEEV+DCY
Sbjct: 121 SPNPYENALSIIGKTLAPFDDDSLIPCFGFGDATTHDQTVFGFHSDNTPCHGFEEVIDCY 180

Query: 218 KKIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQLQ--------------- 277
           K IIPN QLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQ+                
Sbjct: 181 KNIIPNVQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDDELSVQEE 240

Query: 278 ------CWRCAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIDTS 337
                     AYPLSI+LVGVGDGPWD+MKKFDDKIPARDFDNFQFVNFTEIMSKN+ T 
Sbjct: 241 KTIKAIVDASAYPLSIVLVGVGDGPWDNMKKFDDKIPARDFDNFQFVNFTEIMSKNLGTP 300

Query: 338 EKEAAFALAALMEVPFQYKAVTEVGLIG 344
           EKEAAFALAALMEVPFQYKAVTE+GLIG
Sbjct: 301 EKEAAFALAALMEVPFQYKAVTEMGLIG 325

[Close]

BLAST of Lsi10G015050 vs. NCBI nr
Match: XP_023533277.1 (E3 ubiquitin-protein ligase RGLG4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.5 bits (1225), Expect = 2.0e-130
Identity = 255/366 (69.67%), Postives = 269/366 (73.50%), Query Frame = 0


Query: 33  AWLNNMGGWASSSAKRSNGGEKSGKTAA------------------VRKEPSLKKTDSHS 92
           AW +NMG   SSS+KRS GGEK  K A+                     EPS+K T   S
Sbjct: 5   AWFSNMGSLVSSSSKRSGGGEKPAKAASEPSFGGRGGGGGGEKPGKTAVEPSVKSTVRRS 64

Query: 93  ----------------SGGGGGGSSRGKSLWRPEKKVYFPKKYGFIADNFSSIDQVTAAL 152
                            GGGGGG  RGK     EKK  F +KYGFIADNFSSIDQVT AL
Sbjct: 65  IGENPGKMAAEPSVKNMGGGGGGGGRGKGSRLSEKKASFRQKYGFIADNFSSIDQVTEAL 124

Query: 153 RKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAVSDSPNPYEKALSIIGKTLAPFDED 212
           RKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLH+VSDSPNPYEKALSIIG+TLAPFD+D
Sbjct: 125 RKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHSVSDSPNPYEKALSIIGRTLAPFDDD 184

Query: 213 GLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKKIIPNAQLSGPTSYGPVVEAA 272
           GLIPCFGFGDATTHDQ VFSFHNDNSPCHGFEEVLDCYK+IIPN QLSGPTSY  VVEAA
Sbjct: 185 GLIPCFGFGDATTHDQEVFSFHNDNSPCHGFEEVLDCYKRIIPNVQLSGPTSYASVVEAA 244

Query: 273 MDIVEKSGGQFHILLIVADGQLQ---------------------CWRCAYPLSIILVGVG 332
           M+IVEKS GQFHILLIVADGQ+                          AYPLSIILVGVG
Sbjct: 245 MNIVEKSNGQFHILLIVADGQVTRGSSVGDGELSVQEEKTIKAIVDASAYPLSIILVGVG 304

Query: 333 DGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIDTSEKEAAFALAALMEVPFQYKAVT 344
           DGPWDDMKKFDDKIPARDFDNFQFVNFTEIMS+NI T EKEAAFALAALMEVP QYKAV 
Sbjct: 305 DGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSRNIATPEKEAAFALAALMEVPLQYKAVK 364

[Close]

BLAST of Lsi10G015050 vs. NCBI nr
Match: XP_022947336.1 (E3 ubiquitin-protein ligase RGLG4 isoform X1 [Cucurbita moschata])

HSP 1 Score: 473.4 bits (1217), Expect = 1.7e-129
Identity = 254/373 (68.10%), Postives = 269/373 (72.12%), Query Frame = 0


Query: 33  AWLNNMGGWASSSAKRSNGGEKSGKTAA------------------VRKEPSLKKTDSHS 92
           AW +NMG   SSS+KRS GGEK  K A+                     EPS+K T   S
Sbjct: 5   AWFSNMGSLVSSSSKRSGGGEKPAKAASEPSFGGRGGGGGGEKPAKTAAEPSVKSTVRRS 64

Query: 93  -----------------------SGGGGGGSSRGKSLWRPEKKVYFPKKYGFIADNFSSI 152
                                   GGGGGG  RGK     EKK  F +KYGFIADNFSSI
Sbjct: 65  IGGGGEKPGKMAAQPSVKNMGGGGGGGGGGRGRGKGSRLSEKKASFRQKYGFIADNFSSI 124

Query: 153 DQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAVSDSPNPYEKALSIIGKT 212
           DQVT ALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLH+VSDSPNPYEKALSIIG+T
Sbjct: 125 DQVTEALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHSVSDSPNPYEKALSIIGRT 184

Query: 213 LAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKKIIPNAQLSGPTSY 272
           LAPFD+DGLIPCFGFGDATTHDQ VFSFHNDNSPCHGFEEVLDCYK+IIPN QLSGPTSY
Sbjct: 185 LAPFDDDGLIPCFGFGDATTHDQEVFSFHNDNSPCHGFEEVLDCYKRIIPNVQLSGPTSY 244

Query: 273 GPVVEAAMDIVEKSGGQFHILLIVADGQLQ---------------------CWRCAYPLS 332
             VVEAAM+IVEKS GQFHILLIVADGQ+                          AYPLS
Sbjct: 245 ASVVEAAMNIVEKSNGQFHILLIVADGQVTRGSSVGDAELSVQEEKTIKAIVDASAYPLS 304

Query: 333 IILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIDTSEKEAAFALAALMEVP 344
           IILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMS+N+ T EKEAAFALAALMEVP
Sbjct: 305 IILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSRNVATPEKEAAFALAALMEVP 364

[Close]

BLAST of Lsi10G015050 vs. TAIR 10
Match: AT1G79380.1 (Ca(2)-dependent phospholipid-binding protein (Copine) family )

HSP 1 Score: 370.5 bits (950), Expect = 1.4e-102
Identity = 174/266 (65.41%), Postives = 211/266 (79.32%), Query Frame = 0


Query: 99  KKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAVSDSP 158
           KKY  I D FSS+DQV+ ALR+ GLESSNLI+G+DFTKSNEWTGK SF+ + LHA+ ++ 
Sbjct: 51  KKYALIPDRFSSLDQVSKALREAGLESSNLILGVDFTKSNEWTGKTSFDGKCLHALGETS 110

Query: 159 NPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKK 218
           NPYEKA+ +IG+TLAPFDED LIPCFGFGD+TTHD+ VF FH+DNSPCHGFEEVL CYK+
Sbjct: 111 NPYEKAIFVIGQTLAPFDEDNLIPCFGFGDSTTHDEEVFGFHSDNSPCHGFEEVLACYKR 170

Query: 219 IIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQLQ----------------- 278
           I PN +LSGPTSYGP+++AA+DIVEK+ GQFH+L+IVADGQ+                  
Sbjct: 171 IAPNLRLSGPTSYGPLIDAAVDIVEKNNGQFHVLVIVADGQVTRGTDMAEGELSQQEKTT 230

Query: 279 ----CWRCAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIDTSEK 338
                   +Y LSI+LVGVGDGPW+DM+KFDDKIP R+FDNFQFVNFTEIM++N   S K
Sbjct: 231 IDAIVNASSYALSIVLVGVGDGPWEDMRKFDDKIPKREFDNFQFVNFTEIMTRNSPESAK 290

Query: 339 EAAFALAALMEVPFQYKAVTEVGLIG 344
           E AFALAALME+PFQY+A  E+ L+G
Sbjct: 291 ETAFALAALMEIPFQYQAAIELRLLG 316

[Close]

BLAST of Lsi10G015050 vs. TAIR 10
Match: AT1G67800.2 (Copine (Calcium-dependent phospholipid-binding protein) family )

HSP 1 Score: 348.2 bits (892), Expect = 7.5e-96
Identity = 182/339 (53.69%), Postives = 231/339 (68.14%), Query Frame = 0


Query: 34  WLNNMGGWASSSAKRSNGGEK--------SGKTAAVRKEPSLKKTDSHSSGGGGGGSSRG 93
           WL+ MGG +S  + R  G  +        S   ++   + S  +T +H S       + G
Sbjct: 17  WLSWMGGSSSKESPRGGGSGRRYERSVSGSSSYSSAWDQSSYYQTPNHPSASPVSSYNSG 76

Query: 94  KSLWRPEKKVYFPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVS 153
           +     +      +KY  IADN+ SID+VTAAL   GLESSNLIVGID TKSNEWTG  S
Sbjct: 77  R-----QTPKNLERKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARS 136

Query: 154 FNNRSLHAVSDSPNPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSP 213
           F  +SLH +  +PNPY++A+SIIGKTL+ FDED LIPC+GFGDATTHDQ VFSF+ +++ 
Sbjct: 137 FGRKSLHFIGTTPNPYQQAISIIGKTLSVFDEDNLIPCYGFGDATTHDQDVFSFNPNDTY 196

Query: 214 CHGFEEVLDCYKKIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQLQ---- 273
           C+GFEEVL CY++I+P  +LSGPTS+ P++E AM IVE+SGGQ+H+LLI+ADGQ+     
Sbjct: 197 CNGFEEVLMCYREIVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVD 256

Query: 274 -----------------CWRCAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNF 333
                                 YPLSI+LVGVGDGPWD M++FDD IPAR FDNFQFVNF
Sbjct: 257 TDNGGFSPQEQQTIDAIVRASEYPLSIVLVGVGDGPWDTMRQFDDNIPARAFDNFQFVNF 316

Query: 334 TEIMSKNIDTSEKEAAFALAALMEVPFQYKAVTEVGLIG 344
           T+IMSKNID + KEA FAL+ALME+P QYKA  E+GL+G
Sbjct: 317 TDIMSKNIDPARKEAEFALSALMEIPSQYKATLELGLLG 350

[Close]

BLAST of Lsi10G015050 vs. TAIR 10
Match: AT1G67800.1 (Copine (Calcium-dependent phospholipid-binding protein) family )

HSP 1 Score: 344.0 bits (881), Expect = 1.4e-94
Identity = 180/335 (53.73%), Postives = 228/335 (68.06%), Query Frame = 0


Query: 38  MGGWASSSAKRSNGGEK--------SGKTAAVRKEPSLKKTDSHSSGGGGGGSSRGKSLW 97
           MGG +S  + R  G  +        S   ++   + S  +T +H S       + G+   
Sbjct: 1   MGGSSSKESPRGGGSGRRYERSVSGSSSYSSAWDQSSYYQTPNHPSASPVSSYNSGR--- 60

Query: 98  RPEKKVYFPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNR 157
             +      +KY  IADN+ SID+VTAAL   GLESSNLIVGID TKSNEWTG  SF  +
Sbjct: 61  --QTPKNLERKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGRK 120

Query: 158 SLHAVSDSPNPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGF 217
           SLH +  +PNPY++A+SIIGKTL+ FDED LIPC+GFGDATTHDQ VFSF+ +++ C+GF
Sbjct: 121 SLHFIGTTPNPYQQAISIIGKTLSVFDEDNLIPCYGFGDATTHDQDVFSFNPNDTYCNGF 180

Query: 218 EEVLDCYKKIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQLQ-------- 277
           EEVL CY++I+P  +LSGPTS+ P++E AM IVE+SGGQ+H+LLI+ADGQ+         
Sbjct: 181 EEVLMCYREIVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDNG 240

Query: 278 -------------CWRCAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIM 337
                             YPLSI+LVGVGDGPWD M++FDD IPAR FDNFQFVNFT+IM
Sbjct: 241 GFSPQEQQTIDAIVRASEYPLSIVLVGVGDGPWDTMRQFDDNIPARAFDNFQFVNFTDIM 300

Query: 338 SKNIDTSEKEAAFALAALMEVPFQYKAVTEVGLIG 344
           SKNID + KEA FAL+ALME+P QYKA  E+GL+G
Sbjct: 301 SKNIDPARKEAEFALSALMEIPSQYKATLELGLLG 330

[Close]

BLAST of Lsi10G015050 vs. TAIR 10
Match: AT1G67800.3 (Copine (Calcium-dependent phospholipid-binding protein) family )

HSP 1 Score: 344.0 bits (881), Expect = 1.4e-94
Identity = 180/335 (53.73%), Postives = 228/335 (68.06%), Query Frame = 0


Query: 38  MGGWASSSAKRSNGGEK--------SGKTAAVRKEPSLKKTDSHSSGGGGGGSSRGKSLW 97
           MGG +S  + R  G  +        S   ++   + S  +T +H S       + G+   
Sbjct: 1   MGGSSSKESPRGGGSGRRYERSVSGSSSYSSAWDQSSYYQTPNHPSASPVSSYNSGR--- 60

Query: 98  RPEKKVYFPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNR 157
             +      +KY  IADN+ SID+VTAAL   GLESSNLIVGID TKSNEWTG  SF  +
Sbjct: 61  --QTPKNLERKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGRK 120

Query: 158 SLHAVSDSPNPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGF 217
           SLH +  +PNPY++A+SIIGKTL+ FDED LIPC+GFGDATTHDQ VFSF+ +++ C+GF
Sbjct: 121 SLHFIGTTPNPYQQAISIIGKTLSVFDEDNLIPCYGFGDATTHDQDVFSFNPNDTYCNGF 180

Query: 218 EEVLDCYKKIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQLQ-------- 277
           EEVL CY++I+P  +LSGPTS+ P++E AM IVE+SGGQ+H+LLI+ADGQ+         
Sbjct: 181 EEVLMCYREIVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDNG 240

Query: 278 -------------CWRCAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIM 337
                             YPLSI+LVGVGDGPWD M++FDD IPAR FDNFQFVNFT+IM
Sbjct: 241 GFSPQEQQTIDAIVRASEYPLSIVLVGVGDGPWDTMRQFDDNIPARAFDNFQFVNFTDIM 300

Query: 338 SKNIDTSEKEAAFALAALMEVPFQYKAVTEVGLIG 344
           SKNID + KEA FAL+ALME+P QYKA  E+GL+G
Sbjct: 301 SKNIDPARKEAEFALSALMEIPSQYKATLELGLLG 330

[Close]

BLAST of Lsi10G015050 vs. TAIR 10
Match: AT1G67800.4 (Copine (Calcium-dependent phospholipid-binding protein) family )

HSP 1 Score: 344.0 bits (881), Expect = 1.4e-94
Identity = 180/335 (53.73%), Postives = 228/335 (68.06%), Query Frame = 0


Query: 38  MGGWASSSAKRSNGGEK--------SGKTAAVRKEPSLKKTDSHSSGGGGGGSSRGKSLW 97
           MGG +S  + R  G  +        S   ++   + S  +T +H S       + G+   
Sbjct: 1   MGGSSSKESPRGGGSGRRYERSVSGSSSYSSAWDQSSYYQTPNHPSASPVSSYNSGR--- 60

Query: 98  RPEKKVYFPKKYGFIADNFSSIDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNR 157
             +      +KY  IADN+ SID+VTAAL   GLESSNLIVGID TKSNEWTG  SF  +
Sbjct: 61  --QTPKNLERKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGRK 120

Query: 158 SLHAVSDSPNPYEKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGF 217
           SLH +  +PNPY++A+SIIGKTL+ FDED LIPC+GFGDATTHDQ VFSF+ +++ C+GF
Sbjct: 121 SLHFIGTTPNPYQQAISIIGKTLSVFDEDNLIPCYGFGDATTHDQDVFSFNPNDTYCNGF 180

Query: 218 EEVLDCYKKIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQLQ-------- 277
           EEVL CY++I+P  +LSGPTS+ P++E AM IVE+SGGQ+H+LLI+ADGQ+         
Sbjct: 181 EEVLMCYREIVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDNG 240

Query: 278 -------------CWRCAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIM 337
                             YPLSI+LVGVGDGPWD M++FDD IPAR FDNFQFVNFT+IM
Sbjct: 241 GFSPQEQQTIDAIVRASEYPLSIVLVGVGDGPWDTMRQFDDNIPARAFDNFQFVNFTDIM 300

Query: 338 SKNIDTSEKEAAFALAALMEVPFQYKAVTEVGLIG 344
           SKNID + KEA FAL+ALME+P QYKA  E+GL+G
Sbjct: 301 SKNIDPARKEAEFALSALMEIPSQYKATLELGLLG 330

The following BLAST results are available for this feature:

BLAST of Lsi10G015050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAL0	2.0e-101	65.41	E3 ubiquitin-protein ligase RGLG4 OS=Arabidopsis thaliana OX=3702 GN=RGLG4 PE=1 ...	[more]
Q8LB88	2.0e-93	53.73	E3 ubiquitin-protein ligase RGLG5 OS=Arabidopsis thaliana OX=3702 GN=RGLG5 PE=1 ...	[more]
Q9SS90	2.3e-89	59.70	E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana OX=3702 GN=RGLG1 PE=1 ...	[more]
Q9LY87	5.1e-89	55.33	E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana OX=3702 GN=RGLG2 PE=1 ...	[more]
Q8RX26	2.5e-88	61.02	E3 ubiquitin-protein ligase RGLG3 OS=Arabidopsis thaliana OX=3702 GN=RGLG3 PE=1 ...	[more]

BLAST of Lsi10G015050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C2F8	2.4e-150	83.18	E3 ubiquitin-protein ligase RGLG2 OS=Cucumis melo OX=3656 GN=LOC103496272 PE=4 S...	[more]
A0A0A0KG96	3.5e-149	82.28	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G135420 P...	[more]
A0A6J1G650	8.0e-130	68.10	E3 ubiquitin-protein ligase RGLG4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1G665	8.0e-130	68.10	E3 ubiquitin-protein ligase RGLG4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KZS5	8.9e-129	68.56	E3 ubiquitin-protein ligase RGLG4 OS=Cucurbita maxima OX=3661 GN=LOC111499741 PE...	[more]

BLAST of Lsi10G015050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456279.1	5.0e-150	83.18	PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Cucumis melo]	[more]
XP_004139915.2	7.2e-149	82.28	E3 ubiquitin-protein ligase RGLG4 [Cucumis sativus] >KGN46786.1 hypothetical pro...	[more]
XP_038901341.1	9.4e-149	83.84	E3 ubiquitin-protein ligase RGLG4 [Benincasa hispida]	[more]
XP_023533277.1	2.0e-130	69.67	E3 ubiquitin-protein ligase RGLG4 [Cucurbita pepo subsp. pepo]	[more]
XP_022947336.1	1.7e-129	68.10	E3 ubiquitin-protein ligase RGLG4 isoform X1 [Cucurbita moschata]	[more]

BLAST of Lsi10G015050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79380.1	1.4e-102	65.41	Ca(2)-dependent phospholipid-binding protein (Copine) family	[more]
AT1G67800.2	7.5e-96	53.69	Copine (Calcium-dependent phospholipid-binding protein) family	[more]
AT1G67800.1	1.4e-94	53.73	Copine (Calcium-dependent phospholipid-binding protein) family	[more]
AT1G67800.3	1.4e-94	53.73	Copine (Calcium-dependent phospholipid-binding protein) family	[more]
AT1G67800.4	1.4e-94	53.73	Copine (Calcium-dependent phospholipid-binding protein) family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010734	Copine, C-terminal	PFAM	PF07002	Copine	coord: 150..340 e-value: 4.4E-62 score: 209.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..88
None	No IPR available	PANTHER	PTHR45751	COPINE FAMILY PROTEIN 1	coord: 75..343
None	No IPR available	PANTHER	PTHR45751:SF16	E3 UBIQUITIN-PROTEIN LIGASE RGLG4	coord: 75..343

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G015050.1	Lsi10G015050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009611	response to wounding
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004842	ubiquitin-protein transferase activity