Lsi10G014940 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAAAAAGGTAATTATATATATATTATTTTGGTGCAACTGCGAAATAAAAATAAAATAAAATCTCCATTTTTGGAAGCAGCAAAGCGTCTAACGCGGTCCAAAAACAAAATAAAACAACCAACACGAAAGAGCCGCGTAGGGTTCTCGACCAAGCCCTTCCACGCCATTGCCTTGCCATTGCCGTTTCCCTCGGGACCTTCAAATCAACGCCTTAAAGCGCCAAACAAACCAATATAAACATTGCCCACTCCTGTCACATTGCTTCCTTTATTACATTCACTCTCTCAAATCAAATCAATTTCTTCTTCCACTCTCTTTCAATGGACGTTATGGAAGATTGCAGAATCATCGATGGAAGAATTTTTGGATTCCACGTTTGAGGATTATTACTGGAGGTTTCTGTTTCTGTTTTTGTTTTTGTTTTCTTTTTCAGCTTTTGAAGACGGGATGATGTGGAGGAAATGGTGTTCTTGTGCTAGTTTATTGAGTCGGAGATTGTTGGTGAATGGAGTTCCGGGGAATTCTTCTCCGGTACTTTCTTATTATGGAACTTTAGGGCTTGGTGGAGTTTCTTTGATTCCATCGACGGCGGTACGGTCATCGACCTGGTTTTGTACCAGAGTGGCTTCGTTTTCGTCGTCTGTGGATTCAGGAAATTCTACAGGAGTTCTTCGCGATGTGGGAAAAAGTGAGAGTGGTGGCCCTGGTCCTGGCCTTGGCCTTGGGTCTGTGAATGAAGAATCTGGTGATGGAATTGGTGGAGAGACGATTTCGTTTGGGGAAGCTAAAAGGCTGATGAGATTGGTTAATGTTGAGGCGCTGAAGATGAAATTGGGGACTGATGGGAAGGAGGCGATTGGATATTCGGAGCTTCTTGAAGCTTGTAAAAGCATGGGCGTTGCTAGGTCTCAGGATGAAGCTGCTGCTTTTGCTCGAGTTCTTGATGAAGCTGGTGTGGTTCTTCTTTTTCGCGATAAAGTCTATCTTCATCCGGACAAGGTTGGTGAAAGGGGTGGGACCTTATTCAATTAATGTACTGCATTGCATCATGGTTGTGGGTGTTGCATTTCTTCATAAATCGTTGTCATTCAATTTCTGGTTTATTTAGTGTAAAAAATACGGAAGGTAGGTAGAAGTTTTCTTAGAAAGGGATAGAGTTTTATGTACTGACTTTCTTTAGATGTGTAGGTTTTTCAATTTTAAGGACAGTTTGGGGACGAGTGGTTAAGGCGTGTGAACATGATCTATTCTATAGGTTGTACAACGGTGTCCTTAAGTGAAAAAAAAAAAAAAGAACAGTTTGGGGACAGAGTAGGGAAATTTTTTAATTTTGAATATAATTTTTTTCTTTTGAATCTAAGACAAATCAAAGAGGGACCATGGATGTAAGAAAGAAAGGCATTGGTGGGATGGTTCAATCAATGGTGGCGGACCATGATTTAATTGCGTCAAGTCAAATGGGTTGTCTCGTGAGATTTAGGGTACGTTCAAGCTGGGTCCATACACTTGAGAAAAATAAAAAAGAAGACAAATCAAAGGGGAAAGTTTGGAAGTTCTGGTTGTTTTTGACTTTTGTTTTGTTTTTTTTGTTCTCTTAAAAGGTTTAGAGAATGGAACATGTCATTCGGCTAATAAGATTTGGGGGGCTAACTAGGTCGACAGGATCCGGCATTTAGAAGTCTTTGAATGGATTTTCCTTCCTTAATGGAAAAACTGGCTTTTCATTAAGTCTTTGAATGGATTTTCCTTCCTTAATGGAAAAACTGGCTTTTCATTAAGTTGAATGGAAGGAAAAAAATAAAAAAGAAGGGTCGACCAAAAGGAGAAACACACAAAAAACACAACTACAAGTTGGTGACCAGCTATTGGTTATCAAATGGCACTTTTCAGAATTGGGCACAAAAAAAGAAGGCCAACTTCCACAAAAACATTGAAGAGGTAGAGAGGAAAATCAAATACTAATTAAGATTACTGTGATGGGAAGGGTAGTTTTTGGAGTTTTAAGACAAGTTTTGAGGACTTGCAATTTATACTTTCACAAGAAACGATCTGAGATATTATTTTGTTCTCTTCCCCTTAAGCGGGACGTGCTTATTGGCTCTGAGATGAATTTCAGAGATGTAGCTTATGCTTTTTTTTCTTTTTCATAAAGAATATCTTTGTGGGTCACAACTTTGTCCCCAATCTTAAACTGCCAAGAGTCAATAGTTTGGGCAGAGATATTGTTTATTTATTTTTGAAGGAGACAAACTTCCCATTGGTTTAGTTAAAAGTTTCATCTACTCTAGAAGAAAACCTACTAAGAGCATCTAAATTTGTGTTAACTACAGAAGGAATAGGGTTTACTAAAAAAAAGTTGGAAAAAGAACACCAAGTGGAACACAGCAAATCTAGGAAAGTCAAAAGTTCCATCCCATATTTTCCAAGCTGGGGTGTCCACCTCATTTATCCCATTACTTTTTTTGCTCTCCCTTGAAATCTGTGTCCACACAAAACTTGAGAAATATTGTCTTTTGCTTCGCTATCAAAGACTCGAGATATATGGACACTGTCTGTAACATCAAGGATGTCCAAAATTCCTTGCAAAAGGTCGGTAAAAATGTACATGTCCAGCATCTTTCATCGCTCTTGTACTTGGTATACGTATAACAGATTTAGTTGAATAAGAATTGATTGGAGCTGCCTCTCTTGTTTAATTTGTTTTTAATTTTATAATGTGAGCATTCAAGTCTTGTCTTCCAGCTTTGTGGGTTCTGAACTCTGAGAAATTTGATTGGCAGTTTTGAAGTGTTGTTTCTCTTTGTTCAGAGATTCAAGTCTTGTCTTGCAGTTTAGTGGCTTAGTTCTTTTTATGAGCCTATCTCTGGGGTTTGAGTTTTCACAGAATCGTGCTTCTTGGAAGAACTTAGCTTTATCAAATCATATCCATCTGATAGCTGAAGGCATCACTGTTGGTGCAGTTATATTTTGGTTATGGTCAAAAGGAAACTATGAACTCAATCTGCGCTTTATGGGCCATTGGCGAAGTAAAGAAGAGAGGAGAGAATAAGAGGAAAAGGAAAGACACTAAATTTTATTATTAAGATTTAGAGTGTATAGTCTATTAGGTGTATTTGTGATTTGATTAGGCTGATAATTGGGTTTATGATTCTGTAAATGGTTGAGTGAGCATCTCCAAGTAGTCAATATATTCACATTCTTAATGTATGCTGGAAGCTTCAATCCTGAGGCTCAGTAGGTCATATCCTCGACGCTTGTTTACCATTTTTGCATTGTATGTTCTTTTCGCACTACTGCAAAAGTGAGAACCTGGTTCTTTTCCCACATTATCCATGCTCACCAACAGAATTGGAATTAGAAGATTATCTGTATACACATGTAAAACATTAGCTAAACATTTTGGATATGTTCTTACCGTATGAAATAAATGCACAAATCTGCAATTTTTGTCATGCGCTAATAGCTTTTCGACTCATATGAACCTAATCTTAATGTTGTAGGTGGTGGATCTCGTGAGACGAGCCATTCCCATTGCTTTGATGCCCGAAGACGACCCGACAAGGAGCGAGCTAAAGCAGCTGCAAGAAAAGAAGGAAGAAATCGATGTACTGGCACATAAGCAGGTGCGACGAATACTGTGGACCGGGCTAGGTTTAGCCATTCTGCAAGTTGGACTCTTCTTCAGGCTAACATTCTGGGAATTTTCATGGGACGTAATGGAACCAATTGCATTTTTCACCACAACAACTGGATTAGTTATAGGCTATGCTTATTTCCTGTTCACTTCAAGAGATCCCACCTACCAGGACTTGTTGAAGAGGCTTTTCCTCTCAAGGCAAAGGAAGCTGTTCAAGAAGCATTCTTTTGATGTTTGCAGATTCAAGGAGTTGCAGAAAAAATGTAAGTCGCCTCTCGACGCCACGGCAAATATTAAAAATCGGGTGGGCGTAGATCTGGACCTTGAGGATTGTTTGAGTAGAGATTAATTACTATCATCATATACCCTTCCTTTATTAGGACAGGTAAGGGGTTAACTATTATTAACATCCCTAATCTTTTCTTTCTTTCTGGGGGCTGCCATTCAATTTTGGAGTTTAGAGTTATAAAACTAGTAAAGAATACTTGCAATTGTTCAATCAAATATGGAATGGAATGCACTGAAAATAACCGTTGCATTACCAAACCTTCAGTGTCTTTGTTGCCCAGCTGCATTGCTCTTGTACTCATGAAGTGAATTTTGATCTTTGGACTTAAAAACACTTTCTATAAGAATATTACATTGCAATTGAGAACGAAATTTGGGCTTACTATTCAAACAA TTAAAAAGGTAATTATATATATATTATTTTGGTGCAACTGCGAAATAAAAATAAAATAAAATCTCCATTTTTGGAAGCAGCAAAGCGTCTAACGCGGTCCAAAAACAAAATAAAACAACCAACACGAAAGAGCCGCGTAGGGTTCTCGACCAAGCCCTTCCACGCCATTGCCTTGCCATTGCCGTTTCCCTCGGGACCTTCAAATCAACGCCTTAAAGCGCCAAACAAACCAATATAAACATTGCCCACTCCTGTCACATTGCTTCCTTTATTACATTCACTCTCTCAAATCAAATCAATTTCTTCTTCCACTCTCTTTCAATGGACGTTATGGAAGATTGCAGAATCATCGATGGAAGAATTTTTGGATTCCACGTTTGAGGATTATTACTGGAGGTTTCTGTTTCTGTTTTTGTTTTTGTTTTCTTTTTCAGCTTTTGAAGACGGGATGATGTGGAGGAAATGGTGTTCTTGTGCTAGTTTATTGAGTCGGAGATTGTTGGTGAATGGAGTTCCGGGGAATTCTTCTCCGGTACTTTCTTATTATGGAACTTTAGGGCTTGGTGGAGTTTCTTTGATTCCATCGACGGCGGTACGGTCATCGACCTGGTTTTGTACCAGAGTGGCTTCGTTTTCGTCGTCTGTGGATTCAGGAAATTCTACAGGAGTTCTTCGCGATGTGGGAAAAAGTGAGAGTGGTGGCCCTGGTCCTGGCCTTGGCCTTGGGTCTGTGAATGAAGAATCTGGTGATGGAATTGGTGGAGAGACGATTTCGTTTGGGGAAGCTAAAAGGCTGATGAGATTGGTTAATGTTGAGGCGCTGAAGATGAAATTGGGGACTGATGGGAAGGAGGCGATTGGATATTCGGAGCTTCTTGAAGCTTGTAAAAGCATGGGCGTTGCTAGGTCTCAGGATGAAGCTGCTGCTTTTGCTCGAGTTCTTGATGAAGCTGGTGTGGTTCTTCTTTTTCGCGATAAAGTCTATCTTCATCCGGACAAGGTGGTGGATCTCGTGAGACGAGCCATTCCCATTGCTTTGATGCCCGAAGACGACCCGACAAGGAGCGAGCTAAAGCAGCTGCAAGAAAAGAAGGAAGAAATCGATGTACTGGCACATAAGCAGGTGCGACGAATACTGTGGACCGGGCTAGGTTTAGCCATTCTGCAAGTTGGACTCTTCTTCAGGCTAACATTCTGGGAATTTTCATGGGACGTAATGGAACCAATTGCATTTTTCACCACAACAACTGGATTAGTTATAGGCTATGCTTATTTCCTGTTCACTTCAAGAGATCCCACCTACCAGGACTTGTTGAAGAGGCTTTTCCTCTCAAGGCAAAGGAAGCTGTTCAAGAAGCATTCTTTTGATGTTTGCAGATTCAAGGAGTTGCAGAAAAAATGTAAGTCGCCTCTCGACGCCACGGCAAATATTAAAAATCGGGTGGGCGTAGATCTGGACCTTGAGGATTGTTTGAGTAGAGATTAATTACTATCATCATATACCCTTCCTTTATTAGGACAGGTAAGGGGTTAACTATTATTAACATCCCTAATCTTTTCTTTCTTTCTGGGGGCTGCCATTCAATTTTGGAGTTTAGAGTTATAAAACTAGTAAAGAATACTTGCAATTGTTCAATCAAATATGGAATGGAATGCACTGAAAATAACCGTTGCATTACCAAACCTTCAGTGTCTTTGTTGCCCAGCTGCATTGCTCTTGTACTCATGAAGTGAATTTTGATCTTTGGACTTAAAAACACTTTCTATAAGAATATTACATTGCAATTGAGAACGAAATTTGGGCTTACTATTCAAACAA ATGGAAGAATTTTTGGATTCCACGTTTGAGGATTATTACTGGAGGTTTCTGTTTCTGTTTTTGTTTTTGTTTTCTTTTTCAGCTTTTGAAGACGGGATGATGTGGAGGAAATGGTGTTCTTGTGCTAGTTTATTGAGTCGGAGATTGTTGGTGAATGGAGTTCCGGGGAATTCTTCTCCGGTACTTTCTTATTATGGAACTTTAGGGCTTGGTGGAGTTTCTTTGATTCCATCGACGGCGGTACGGTCATCGACCTGGTTTTGTACCAGAGTGGCTTCGTTTTCGTCGTCTGTGGATTCAGGAAATTCTACAGGAGTTCTTCGCGATGTGGGAAAAAGTGAGAGTGGTGGCCCTGGTCCTGGCCTTGGCCTTGGGTCTGTGAATGAAGAATCTGGTGATGGAATTGGTGGAGAGACGATTTCGTTTGGGGAAGCTAAAAGGCTGATGAGATTGGTTAATGTTGAGGCGCTGAAGATGAAATTGGGGACTGATGGGAAGGAGGCGATTGGATATTCGGAGCTTCTTGAAGCTTGTAAAAGCATGGGCGTTGCTAGGTCTCAGGATGAAGCTGCTGCTTTTGCTCGAGTTCTTGATGAAGCTGGTGTGGTTCTTCTTTTTCGCGATAAAGTCTATCTTCATCCGGACAAGGTGGTGGATCTCGTGAGACGAGCCATTCCCATTGCTTTGATGCCCGAAGACGACCCGACAAGGAGCGAGCTAAAGCAGCTGCAAGAAAAGAAGGAAGAAATCGATGTACTGGCACATAAGCAGGTGCGACGAATACTGTGGACCGGGCTAGGTTTAGCCATTCTGCAAGTTGGACTCTTCTTCAGGCTAACATTCTGGGAATTTTCATGGGACGTAATGGAACCAATTGCATTTTTCACCACAACAACTGGATTAGTTATAGGCTATGCTTATTTCCTGTTCACTTCAAGAGATCCCACCTACCAGGACTTGTTGAAGAGGCTTTTCCTCTCAAGGCAAAGGAAGCTGTTCAAGAAGCATTCTTTTGATGTTTGCAGATTCAAGGAGTTGCAGAAAAAATGTAAGTCGCCTCTCGACGCCACGGCAAATATTAAAAATCGGGTGGGCGTAGATCTGGACCTTGAGGATTGTTTGAGTAGAGATTAA MEEFLDSTFEDYYWRFLFLFLFLFSFSAFEDGMMWRKWCSCASLLSRRLLVNGVPGNSSPVLSYYGTLGLGGVSLIPSTAVRSSTWFCTRVASFSSSVDSGNSTGVLRDVGKSESGGPGPGLGLGSVNEESGDGIGGETISFGEAKRLMRLVNVEALKMKLGTDGKEAIGYSELLEACKSMGVARSQDEAAAFARVLDEAGVVLLFRDKVYLHPDKVVDLVRRAIPIALMPEDDPTRSELKQLQEKKEEIDVLAHKQVRRILWTGLGLAILQVGLFFRLTFWEFSWDVMEPIAFFTTTTGLVIGYAYFLFTSRDPTYQDLLKRLFLSRQRKLFKKHSFDVCRFKELQKKCKSPLDATANIKNRVGVDLDLEDCLSRD Homology
BLAST of Lsi10G014940 vs. ExPASy Swiss-Prot
Match: F4I111 (Calcium uniporter protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g09575 PE=2 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 2.7e-83 Identity = 157/238 (65.97%), Postives = 190/238 (79.83%), Query Frame = 0
BLAST of Lsi10G014940 vs. ExPASy Swiss-Prot
Match: Q8VYR0 (Calcium uniporter protein 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g57610 PE=2 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 7.8e-83 Identity = 160/259 (61.78%), Postives = 199/259 (76.83%), Query Frame = 0
BLAST of Lsi10G014940 vs. ExPASy Swiss-Prot
Match: O64823 (Calcium uniporter protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g23790 PE=2 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.2e-37 Identity = 87/225 (38.67%), Postives = 134/225 (59.56%), Query Frame = 0
BLAST of Lsi10G014940 vs. ExPASy Swiss-Prot
Match: Q1PE15 (Calcium uniporter protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g36820 PE=2 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 3.6e-35 Identity = 82/206 (39.81%), Postives = 123/206 (59.71%), Query Frame = 0
BLAST of Lsi10G014940 vs. ExPASy Swiss-Prot
Match: Q9LVR5 (Calcium uniporter protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g66650 PE=2 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.0e-34 Identity = 84/209 (40.19%), Postives = 122/209 (58.37%), Query Frame = 0
BLAST of Lsi10G014940 vs. ExPASy TrEMBL
Match: A0A6J1FV50 (Calcium uniporter protein OS=Cucurbita moschata OX=3662 GN=LOC111448718 PE=3 SV=1) HSP 1 Score: 595.5 bits (1534), Expect = 1.5e-166 Identity = 313/345 (90.72%), Postives = 319/345 (92.46%), Query Frame = 0
BLAST of Lsi10G014940 vs. ExPASy TrEMBL
Match: A0A6J1JHV8 (Calcium uniporter protein OS=Cucurbita maxima OX=3661 GN=LOC111484499 PE=3 SV=1) HSP 1 Score: 592.0 bits (1525), Expect = 1.7e-165 Identity = 311/345 (90.14%), Postives = 318/345 (92.17%), Query Frame = 0
BLAST of Lsi10G014940 vs. ExPASy TrEMBL
Match: A0A5A7SU81 (Calcium uniporter protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00670 PE=3 SV=1) HSP 1 Score: 578.2 bits (1489), Expect = 2.5e-161 Identity = 310/346 (89.60%), Postives = 319/346 (92.20%), Query Frame = 0
BLAST of Lsi10G014940 vs. ExPASy TrEMBL
Match: A0A1S3C2X1 (Calcium uniporter protein OS=Cucumis melo OX=3656 GN=LOC103496260 PE=3 SV=1) HSP 1 Score: 578.2 bits (1489), Expect = 2.5e-161 Identity = 310/346 (89.60%), Postives = 319/346 (92.20%), Query Frame = 0
BLAST of Lsi10G014940 vs. ExPASy TrEMBL
Match: A0A0A0KD48 (Calcium uniporter protein OS=Cucumis sativus OX=3659 GN=Csa_6G133830 PE=3 SV=1) HSP 1 Score: 572.8 bits (1475), Expect = 1.1e-159 Identity = 306/346 (88.44%), Postives = 317/346 (91.62%), Query Frame = 0
BLAST of Lsi10G014940 vs. NCBI nr
Match: XP_038902671.1 (calcium uniporter protein 5, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 642.9 bits (1657), Expect = 1.7e-180 Identity = 345/378 (91.27%), Postives = 351/378 (92.86%), Query Frame = 0
BLAST of Lsi10G014940 vs. NCBI nr
Match: KAG6570611.1 (Calcium uniporter protein 5, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 597.0 bits (1538), Expect = 1.1e-166 Identity = 314/345 (91.01%), Postives = 319/345 (92.46%), Query Frame = 0
BLAST of Lsi10G014940 vs. NCBI nr
Match: XP_022944197.1 (calcium uniporter protein 5, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 595.5 bits (1534), Expect = 3.2e-166 Identity = 313/345 (90.72%), Postives = 319/345 (92.46%), Query Frame = 0
BLAST of Lsi10G014940 vs. NCBI nr
Match: XP_023512709.1 (calcium uniporter protein 5, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 593.2 bits (1528), Expect = 1.6e-165 Identity = 314/347 (90.49%), Postives = 320/347 (92.22%), Query Frame = 0
BLAST of Lsi10G014940 vs. NCBI nr
Match: XP_022986898.1 (calcium uniporter protein 5, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 592.0 bits (1525), Expect = 3.5e-165 Identity = 311/345 (90.14%), Postives = 318/345 (92.17%), Query Frame = 0
BLAST of Lsi10G014940 vs. TAIR 10
Match: AT1G09575.1 (Protein of unknown function (DUF607) ) HSP 1 Score: 310.5 bits (794), Expect = 1.9e-84 Identity = 157/238 (65.97%), Postives = 190/238 (79.83%), Query Frame = 0
BLAST of Lsi10G014940 vs. TAIR 10
Match: AT1G57610.1 (Protein of unknown function (DUF607) ) HSP 1 Score: 308.9 bits (790), Expect = 5.5e-84 Identity = 160/259 (61.78%), Postives = 199/259 (76.83%), Query Frame = 0
BLAST of Lsi10G014940 vs. TAIR 10
Match: AT1G57610.2 (Protein of unknown function (DUF607) ) HSP 1 Score: 308.9 bits (790), Expect = 5.5e-84 Identity = 160/259 (61.78%), Postives = 199/259 (76.83%), Query Frame = 0
BLAST of Lsi10G014940 vs. TAIR 10
Match: AT1G57610.3 (Protein of unknown function (DUF607) ) HSP 1 Score: 213.0 bits (541), Expect = 4.1e-55 Identity = 107/181 (59.12%), Postives = 141/181 (77.90%), Query Frame = 0
BLAST of Lsi10G014940 vs. TAIR 10
Match: AT2G23790.1 (Protein of unknown function (DUF607) ) HSP 1 Score: 157.9 bits (398), Expect = 1.6e-38 Identity = 87/225 (38.67%), Postives = 134/225 (59.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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