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Lsi10G014310 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTTCCTTACAATTCCCAATCCCCATCGACTACCTTCCAACTCCGCCTAAATTCTTTTTCGGTGGTTCCGCTCTTCCAAAGCCCGCCTATGCCTTCGAACGGCGCCGTTTCTCCAACCTCCGCCTGAGGGCCGCGGATGTGGCGGCTCCGGCAGCCGAGGAAGCAGCGTTGCCGGCTGGGCTGCAGAAGGAGTTCCTGCCTAGACACGTGGCGGTGATTATGGATGGAAATGTGCGGTGGGCACGGCGGATGAATTTGCCGGACTCCAAAGGCCACGACGCCGGCGTACGGTCATTACGGGAAATGGTTGACCTTTGTTTGGAATGGGATATTCCAGTACTCTCCGTTTTTGCCTTCTCTTATGATAACTGGCTTCGCTCTAAGGTCAACTCTCCTTTAAACTCCTTTTTTTTCTTTAGTCCACGTTTTTGGTTTAATTGCAAATTTAATCTATCTAATTTCAAAAAAAAGTTAGAATTTAATTACTATAATTTATAAGAAAATTTTAAAAAAATAAAAAGTAAAGTAAATTATTTACCCAAAATAACAAAATTTTTAGATAATTGTGTCTATCAGGTCTATCAGTGATAGAAATGATATATCTATATCACTTATAGATATTGATTGAAGTCTATCAATGTTTATTAGAGTTTTTTAAATTATTGTCGTAAATAGTTTGACCTTTTTTTCTATCTGTGAAAATTTCCCTAGTTTATAATTAAAATTGGTTCAATTAAAATTAAGTTCTTATAGTTTTAAAAATTATAATATAATCTTTATGGTTTGATAAAACTTCATAAATAATCTCATACATAGTCTCTATCGTGAGGACTACTTATGAAGATTTCATCACTGAGACTAATTTCTAACTTTCTTCGAAATCAAATTTGTAATATAACTATTAGAATTTAGTTCATATACTTTTAAAATGTCTAATTTTTCACTTTATTCTTTTATTTTTTTTAGACATTTGTTCATTTTAGTTCGTATACTTTTAAAATATTCACTTTAGTTTTTATACTTTCAATTTTTACGGTTTCGTATTTTATAAATAAAATGGAGTAGAATTTAAGTCTCGAACTTTAAAAGAGGTAGTAGATGTTACTTGTTGCTTATATGCTCACTTTAATTATTTCAGTTTAATTATTTCAGTCTATGATAATGTGAATTAAAAATTAGTATAAAAATAAAAGTTATAGTTATAGTTTTTATGAATATCTTTTTCTTTTGACTCTGTCTTTTTTGTAAATATCTACACATATATAGAATTAATATACAACTTTTTTTTTCTTTCAATTGTATCAATGAATTTTATGTTAACTTTTTTTTTTTTTTTTTTTTTTAATTTCTTGGAGAGCAGCGGGAGGTAGACTTTTTAATGTTTTTATTTGAAAGAGTTTTGAAGTCTGAGATGGAAAAATCTTCCAGGTAAATTCTAGTCTCATCTTTCTTAGCAATTAACTAATTATCAAAATATAAAAATTAATTAAGTGCGTGTTTGAATTAACTTTTTAAATATTTAAAAATATTTGTAATCATCTAAAAGTGTTCTAATTTATAATAAAAATCAATATTTAATATTAAAATGTTGTAGGATTGTTTCCTACCTTCGTAATTTCTATACTGAAGTTGTTCAAATTCGCAATTAATTGATCAATAATACGTTTAAGTAAATATTTAAATCTACAAACTCTTTTAAAAGTAACAAATGTTAAAATAGATATTTAATTTAGTTGTATCTGATATTTGCCCCAATTGCTCAAGTGGCATAATAATATGATATTTTTTTTTAGAAAATGTTAAATTTTGAAGTGTAGCCTATTTTAATATCTAAAACTTTTCAGTATCTAATTTTTAAATTTATTAAACAAACAATTGACTTGATGATTAATGCCATTATTATTATTCTTATTACTATTTTTGTATTTTATAAGAAATTAGATTAAAATTAGATTGTTGTGGTGTGTCTTTAAAATTTGTTTCAATTTAGAAAATTAGGGCATGTTTGGTAGAGAATTCGAAAATAAGGAATTAAATTAAAACAGAGTTGTATTTCATGTTTTCATATATATGTGTTTGGTAGCAGAATTCAAAAACTAGATTCTAATTTAAACAATTGTAAACTAATGGTAGTTACCCACTAAATATTAGTTAATAATAAACTATTATTAAGATGTTTATGAATATAGTTTTATGTAAAAAAAAAAAGCACTATTTAAGAAGATTTAACAAACCTAGGAAGAGTATATGAAGTTATATCAAACCATAGTAAATTCTAATTTTTAAAACCATATGAACTAACTTGTAATTTTATCCAAATCATAGGACCAAATTTGGAATTTAACTTAATTTATAATAATTAGGTCATACATATTTTAATTATAAAAATTAAATTGGGTTGACATATTATATTCTAAACGTTTTTATCTTGTTTAATATAATTCTGCATTTTAGATTTTAAAATTTAAATTATGAATACAATGAAAACATTTGTTTTTAGAATTTACACCGTTTAAAAACAAAATTTGAGTTATTTACCAAACATATATTCACTTGATTCAATGAATCTGAAGAAAATCTAAATTGTAAACCAAACAAACTCTTAGAAGTTTGATTCTCTCATTTCACATATTGTTAAAATAAAAAATAAATAAATAAAAAAGATAATCGTAAATAGTTGGTTTAATAAAACTTTTATAAATTGAATATATTGGAACTAAATCCAAACTTTTAACTGTACTAAAAAGAATTCAAATTATATCGATAGACTAAATTTGTTTAACCAAATTTATAAATAGGGATTCTCATTTTTAACATTTTTTTGTTATTTCTCTTGTAATAATTAACAGCAAGGGAATTAGATTATCGGTGATTGGGGATTTATCATTGCTTCCAAAATCGCTACAAATTCTAATAAACGAAGCAGTAGAAAGAACAAAATCGAACACGAAACTTCAACTGATCGTGGCGGCGAGCTACAGCGGAAGATACGACGTCGTTCAAGCCTGCAGAAGCCTGGCTCGCAAAGTGAAAAACGACGAGATTCAAGTAGAAGACATAGACGACAGCTTGATCGAACAAGAACTTGAAACCAAATGTACGGACATTCCTCACCCGGATCTCCTCATCAGAACCAGCGGCGAGCTTCGAATCAGCAATTTCTTGCTCTGGCAATCTGCTTACACCGAGTTCTTTTTCAGCGAAACGCTCTGGCCCGATTTCCGGAAGGACGATTTTGTTCAAGCTTTGCTTTCTTATCAGACCAGGCAGCGGCGCTATGGCGGAAGGCAATCTTGAGACTTCATTAAATAAAATAAACCCTAATAATAATAATAAAAAAAAATACTTATACGATCAATAGAAAATATAATATTAACAAACACATAGGAAAAATGAAATGGCGGTGAAAATATGAGTAAGGATGTAACTTCTAAATGTTGTATAAATATTAATAATAAATTTGGTTTCATGGGTTCTATCAATTAAAATTCTTCATGGATAATAATTTATCTACGCTCTCTTTGACTAATATTGTATTTTAAATTTTCATAGGTTAATCAATTTACTAAATAATCCATGTATTAATTCTCAAAAGTGTGAAGATTCTTTCGATTACAATTAGAATAAATACATGGACGTTTCTCAAAGAAAAACTTGACTAA ATGTTTTCCTTACAATTCCCAATCCCCATCGACTACCTTCCAACTCCGCCTAAATTCTTTTTCGGTGGTTCCGCTCTTCCAAAGCCCGCCTATGCCTTCGAACGGCGCCGTTTCTCCAACCTCCGCCTGAGGGCCGCGGATGTGGCGGCTCCGGCAGCCGAGGAAGCAGCGTTGCCGGCTGGGCTGCAGAAGGAGTTCCTGCCTAGACACGTGGCGGTGATTATGGATGGAAATGTGCGGTGGGCACGGCGGATGAATTTGCCGGACTCCAAAGGCCACGACGCCGGCGTACGCAAGGGAATTAGATTATCGGTGATTGGGGATTTATCATTGCTTCCAAAATCGCTACAAATTCTAATAAACGAAGCAGTAGAAAGAACAAAATCGAACACGAAACTTCAACTGATCGTGGCGGCGAGCTACAGCGGAAGATACGACGTCGTTCAAGCCTGCAGAAGCCTGGCTCGCAAAGTGAAAAACGACGAGATTCAAGTAGAAGACATAGACGACAGCTTGATCGAACAAGAACTTGAAACCAAATGTACGGACATTCCTCACCCGGATCTCCTCATCAGAACCAGCGGCGAGCTTCGAATCAGCAATTTCTTGCTCTGGCAATCTGCTTACACCGAGTTCTTTTTCAGCGAAACGCTCTGGCCCGATTTCCGGAAGGACGATTTTGTTCAAGCTTTGCTTTCTTATCAGACCAGGCAGCGGCGCTATGGCGGAAGGCAATCTTGAGACTTCATTAAATAAAATAAACCCTAATAATAATAATAAAAAAAAATACTTATACGATCAATAGAAAATATAATATTAACAAACACATAGGAAAAATGAAATGGCGGTGAAAATATGAGTAAGGATGTAACTTCTAAATGTTGTATAAATATTAATAATAAATTTGGTTTCATGGGTTCTATCAATTAAAATTCTTCATGGATAATAATTTATCTACGCTCTCTTTGACTAATATTGTATTTTAAATTTTCATAGGTTAATCAATTTACTAAATAATCCATGTATTAATTCTCAAAAGTGTGAAGATTCTTTCGATTACAATTAGAATAAATACATGGACGTTTCTCAAAGAAAAACTTGACTAA ATGTTTTCCTTACAATTCCCAATCCCCATCGACTACCTTCCAACTCCGCCTAAATTCTTTTTCGGTGGTTCCGCTCTTCCAAAGCCCGCCTATGCCTTCGAACGGCGCCGTTTCTCCAACCTCCGCCTGAGGGCCGCGGATGTGGCGGCTCCGGCAGCCGAGGAAGCAGCGTTGCCGGCTGGGCTGCAGAAGGAGTTCCTGCCTAGACACGTGGCGGTGATTATGGATGGAAATGTGCGGTGGGCACGGCGGATGAATTTGCCGGACTCCAAAGGCCACGACGCCGGCGTACGCAAGGGAATTAGATTATCGGTGATTGGGGATTTATCATTGCTTCCAAAATCGCTACAAATTCTAATAAACGAAGCAGTAGAAAGAACAAAATCGAACACGAAACTTCAACTGATCGTGGCGGCGAGCTACAGCGGAAGATACGACGTCGTTCAAGCCTGCAGAAGCCTGGCTCGCAAAGTGAAAAACGACGAGATTCAAGTAGAAGACATAGACGACAGCTTGATCGAACAAGAACTTGAAACCAAATGTACGGACATTCCTCACCCGGATCTCCTCATCAGAACCAGCGGCGAGCTTCGAATCAGCAATTTCTTGCTCTGGCAATCTGCTTACACCGAGTTCTTTTTCAGCGAAACGCTCTGGCCCGATTTCCGGAAGGACGATTTTGTTCAAGCTTTGCTTTCTTATCAGACCAGGCAGCGGCGCTATGGCGGAAGGCAATCTTGA MFSLQFPIPIDYLPTPPKFFFGGSALPKPAYAFERRRFSNLRLRAADVAAPAAEEAALPAGLQKEFLPRHVAVIMDGNVRWARRMNLPDSKGHDAGVRKGIRLSVIGDLSLLPKSLQILINEAVERTKSNTKLQLIVAASYSGRYDVVQACRSLARKVKNDEIQVEDIDDSLIEQELETKCTDIPHPDLLIRTSGELRISNFLLWQSAYTEFFFSETLWPDFRKDDFVQALLSYQTRQRRYGGRQS Homology
BLAST of Lsi10G014310 vs. ExPASy Swiss-Prot
Match: Q56Y11 (Dehydrodolichyl diphosphate synthase 2 OS=Arabidopsis thaliana OX=3702 GN=At5g58770 PE=2 SV=2) HSP 1 Score: 233.0 bits (593), Expect = 3.6e-60 Identity = 126/256 (49.22%), Postives = 160/256 (62.50%), Query Frame = 0
BLAST of Lsi10G014310 vs. ExPASy Swiss-Prot
Match: K7X479 (Dehydrodolichyl diphosphate synthase CPT5, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CPT5 PE=1 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 5.7e-58 Identity = 135/309 (43.69%), Postives = 179/309 (57.93%), Query Frame = 0
BLAST of Lsi10G014310 vs. ExPASy Swiss-Prot
Match: K4D3U9 (Cis-prenyltransferase 4, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CPT4 PE=2 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 2.4e-56 Identity = 118/249 (47.39%), Postives = 159/249 (63.86%), Query Frame = 0
BLAST of Lsi10G014310 vs. ExPASy Swiss-Prot
Match: Q8GY03 (Dehydrodolichyl diphosphate synthase 4 OS=Arabidopsis thaliana OX=3702 GN=At5g58782 PE=2 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 9.7e-50 Identity = 107/244 (43.85%), Postives = 143/244 (58.61%), Query Frame = 0
BLAST of Lsi10G014310 vs. ExPASy Swiss-Prot
Match: Q8RX73 (Dehydrodolichyl diphosphate synthase 3 OS=Arabidopsis thaliana OX=3702 GN=At5g58780 PE=2 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 3.1e-48 Identity = 106/237 (44.73%), Postives = 139/237 (58.65%), Query Frame = 0
BLAST of Lsi10G014310 vs. ExPASy TrEMBL
Match: A0A5A7V3H4 (Alkyl transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G00690 PE=3 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 9.3e-112 Identity = 226/302 (74.83%), Postives = 233/302 (77.15%), Query Frame = 0
BLAST of Lsi10G014310 vs. ExPASy TrEMBL
Match: A0A1S3CM26 (Alkyl transferase OS=Cucumis melo OX=3656 GN=LOC103502025 PE=3 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 9.3e-112 Identity = 226/302 (74.83%), Postives = 233/302 (77.15%), Query Frame = 0
BLAST of Lsi10G014310 vs. ExPASy TrEMBL
Match: A0A0A0KBM9 (Alkyl transferase OS=Cucumis sativus OX=3659 GN=Csa_6G185830 PE=3 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 3.9e-110 Identity = 224/302 (74.17%), Postives = 230/302 (76.16%), Query Frame = 0
BLAST of Lsi10G014310 vs. ExPASy TrEMBL
Match: A0A6J1JCL9 (Alkyl transferase OS=Cucurbita maxima OX=3661 GN=LOC111484510 PE=3 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 1.3e-108 Identity = 221/300 (73.67%), Postives = 229/300 (76.33%), Query Frame = 0
BLAST of Lsi10G014310 vs. ExPASy TrEMBL
Match: A0A6J1FRM6 (Alkyl transferase OS=Cucurbita moschata OX=3662 GN=LOC111448184 PE=3 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 1.3e-108 Identity = 221/300 (73.67%), Postives = 229/300 (76.33%), Query Frame = 0
BLAST of Lsi10G014310 vs. NCBI nr
Match: XP_038902544.1 (dehydrodolichyl diphosphate synthase 2 [Benincasa hispida]) HSP 1 Score: 431.0 bits (1107), Expect = 6.8e-117 Identity = 232/300 (77.33%), Postives = 235/300 (78.33%), Query Frame = 0
BLAST of Lsi10G014310 vs. NCBI nr
Match: XP_008464044.1 (PREDICTED: dehydrodolichyl diphosphate synthase 2 [Cucumis melo] >KAA0061834.1 dehydrodolichyl diphosphate synthase 2 [Cucumis melo var. makuwa]) HSP 1 Score: 412.9 bits (1060), Expect = 1.9e-111 Identity = 226/302 (74.83%), Postives = 233/302 (77.15%), Query Frame = 0
BLAST of Lsi10G014310 vs. NCBI nr
Match: XP_004143216.1 (dehydrodolichyl diphosphate synthase 2 [Cucumis sativus] >KGN47085.1 hypothetical protein Csa_020688 [Cucumis sativus]) HSP 1 Score: 407.5 bits (1046), Expect = 8.0e-110 Identity = 224/302 (74.17%), Postives = 230/302 (76.16%), Query Frame = 0
BLAST of Lsi10G014310 vs. NCBI nr
Match: XP_023512175.1 (dehydrodolichyl diphosphate synthase 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 405.2 bits (1040), Expect = 4.0e-109 Identity = 222/300 (74.00%), Postives = 230/300 (76.67%), Query Frame = 0
BLAST of Lsi10G014310 vs. NCBI nr
Match: XP_022943411.1 (dehydrodolichyl diphosphate synthase 2 [Cucurbita moschata] >KAG6570658.1 Dehydrodolichyl diphosphate synthase 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010506.1 Dehydrodolichyl diphosphate synthase 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 402.5 bits (1033), Expect = 2.6e-108 Identity = 221/300 (73.67%), Postives = 229/300 (76.33%), Query Frame = 0
BLAST of Lsi10G014310 vs. TAIR 10
Match: AT5G58770.1 (Undecaprenyl pyrophosphate synthetase family protein ) HSP 1 Score: 233.0 bits (593), Expect = 2.5e-61 Identity = 126/256 (49.22%), Postives = 160/256 (62.50%), Query Frame = 0
BLAST of Lsi10G014310 vs. TAIR 10
Match: AT5G58782.1 (Undecaprenyl pyrophosphate synthetase family protein ) HSP 1 Score: 198.4 bits (503), Expect = 6.9e-51 Identity = 107/244 (43.85%), Postives = 143/244 (58.61%), Query Frame = 0
BLAST of Lsi10G014310 vs. TAIR 10
Match: AT5G58780.1 (Undecaprenyl pyrophosphate synthetase family protein ) HSP 1 Score: 193.4 bits (490), Expect = 2.2e-49 Identity = 106/237 (44.73%), Postives = 139/237 (58.65%), Query Frame = 0
BLAST of Lsi10G014310 vs. TAIR 10
Match: AT5G58784.1 (Undecaprenyl pyrophosphate synthetase family protein ) HSP 1 Score: 190.3 bits (482), Expect = 1.9e-48 Identity = 105/235 (44.68%), Postives = 137/235 (58.30%), Query Frame = 0
BLAST of Lsi10G014310 vs. TAIR 10
Match: AT2G23410.1 (cis-prenyltransferase ) HSP 1 Score: 185.7 bits (470), Expect = 4.6e-47 Identity = 101/239 (42.26%), Postives = 134/239 (56.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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