Lsi10G014020 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G014020
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	NAD(P)-bd_dom domain-containing protein
Location	chr10: 18122710 .. 18126156 (+)
RNA-Seq Expression	Lsi10G014020
Synteny	Lsi10G014020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTAATACACGTGGCATTCTTTTATTTGCTTAGTTTTTATTTCCCTGGATAATATTTCCAAATAATCTAAAAATTTGGATGGCGTTTGGCTACTGATTTTGGAAGCTGTGGGGACTGTTTGTTTACGAGTCCAATCAAATTCTCAGCCATGGATATCAAAGAAACTTGAAGACGATCGGTGACCAGAAACTGACCACCGACGCCGTTTCTTCTCTCACTCTCCTTGTTCCAATGGCGGCGATCATAAACTCCAATTCATTTATCTTAACCACCGCCCCAAACACCCGACGAAGCTTCAAGAGCCACCGGAGACAGTTCGCCGTCTACGCCAAGAGTTCTGGAACATTCCCTCCTTTTCGTCTAGGGAAATCGAGCAATGAATCGCCGTCTTCCGACGAAGCTTCGGCTGAAGATTCCGGTAATTCGAATCCGTTTCGTTTCGCTTTTGGAAAGGTACCGGATGTGAAGTCTCTGATTCCAGTCGTTAATGAGCCTTCGTCGGGCTTGTCGTTCGGGAATGCGAGGCGGAAGGATACTAATACGGTGTTTGTCGCCGGCGCTACTGGTCTGGCTGGCATTCGGTTAGCGCAGACGCTGTTGCGAGAAGGTTTCAGTGTTCGTGCTGGTGTGCCGGAGCTTGGTGCTGCGCAAGAATTGGCTCGTCTTGCTGCCAAGTATAAGGTCAGTTTAGTGTGGATTTTATATCTGAGAATGGAAGATATTAGAATTTGGTTGTTTTCTGAATTGATACTTCAACTCTTGAATCTAATCGTTAAGTATTTGGTCAGAATGAATTCTGCATCTGAGAATGGAAGTTATAAGGATTCATTGTTTTCTATTATGAATTGATGATTCTACTCTCGCATCCGGTTCGGTTATTCGTTTTGAAGAATAACATTTTGCATTTTATTTGTCGAACACTGAAGGTCATATCGAATGAAGAATCAAAGCGGCTCAACGCCGTCGAATCCTCCTTTCAAGACGCGGAAGCGATTGCCAAGGCGATCGGAAACGCCAGTAAAGTAGTTGTCACTATTGGCGCCGGAGAAAACGGTCCGACCTCCGAAGTTACCACATCGGACGCTTTGCAAGTAATTCAGGCAGCGCAGCTCGCCGGAGTAAGCCATGTGGCAATCGTATACGACGGCAATGCTTCAAGCTCCTCCACCTACAATGTACTCGACGGGCTTTCGTCATTCTTCAACAATCTTTTCACCCGATCTCAGTCATTGTCCGTTGTGGAGCTCTTGCAGAAAATAGCCGAAACCGATGTCGGCTATACGTTCATCAAGACGAATTTGGCTGAAGACTTTGCGCCTGAGCGGGCCTATAACGTCGTCGTCGGAGCTGAAGGAAGCGTTAGTTCCAACGACTACAAAGTAATGTAATGTATGCCATAGTTTATCAAATAATGTTGACAGTTTTTTCCATTTCTCTAATTTCTTCGAGAAGGATCATGTTTGTTATGACGGTATGCTGATCTTGACTTCAACATTGTTATCAGGTGGCGAAGTCACAGATAGCATCGTTGGTGGCCGGCGTTTTCTCGAACACGGCGGTGGCCGAGAACAAGGTGACCTGCATTTTACTGCACCAACTCTTAAGCCCAAAAAACTTTCACAACTCTTAATTAAGCCTTTAACTATTCGACTATTTTTCTGCAATTGTTTAGACTATTGATTGGGCATTTCACATCTAAATTCTTAAGGTTGTGGAAGTGTATTCTAGTCCATCTGCACCCTCAAGTTCAGTAGATCAACTGTTCAGGTAAGTTTTTCCCCTCTTGGATTAATTGTTTATATAGATCACCCACAAATATATCACACGTTTAAAATCTCCCACCAGTAACATCTGAAGATAATAAAATTTTTATTTCTTCGTTTGGAATCTTTATTATTTATTGTCTTCCTTGTGGGGTCTCAAGTTTATTAATTTATTGGCTAAATTACAAAAAATTGTCTCTATGTTTTGTCCTTTGATTTCAAAAATAGCCTTTCAAAAATTGCAATATTACCTTGATCTTTTATAAAAATTTCAAAAACTACCTTGAAATAAAAATTGGTCAACGTTGGACAAAAATTAAAATCTGAAATGATATGATAGTGACCTAGGATGGGATTTGGGACCTGATCACCAACACATCCATTCTATGTCCCAATTTCCATCCAAGATTCTAAGAGATTTTTACATTAAAGTAGTGTTAAAAAGTTTATTCGATGCCAAGGTAATATTGCAACTTTAGAAAGTGTAATAATTATTTTTGAAACCAAGAGTGAAATTCAGAGTATTTGTTATAATTTAGCCCAATTTATTATTTGTAAAGCTCAACAATATTGATTGTAACATTATTGTGTGAAAGGTTAGATATTTTGAACCTGTAAATTTGAAATTGTAAAGTAAAATGAATTTACTTCCTTTTCAAACTGAAAATGGTGTATTCAAGGTTCTTGCATTGTTTCATAGATTAACTGCTTTGATATAAATTTGTATCAGTGCCATTCCCACGGATGGTAGAAGACAAGCTTATGCAGAAGCACAAGCCAAGGCAAAAGCCGAGGAAGAAGCCATAAGAACTGCTGAAAAAGCTCGTGAAGAGGCAGAAGCCGCAAAGAAACAGGAAGTGGAGGCTGCTAAAGCCAAAAGACTCTCAGAAAAGGCAGCCGCCCAAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGAATCCCAAAAGCAAGAATCTGATCAAATCGCTTTCTTTAATTCATTCTTGAACAAAGCCAAGGACTTTAGTTCAGAACAATCCCAAAAGCTCAAAAAGCTCTCAGAAAAGGAACCTCAAGCAGCTGAAGAAGAAGAGGCCCCAGAAAAGGCTGACAATGGAGCCAATTTAGTGAACAACTTTTTCAACAAAGCCAAAGGCTTCGGCTCGGCGCAGCCATGGGAGAAGCTATCTTTTCAACTACAAAAACCATCTGAGGAATCAAATGCTCAAATAGCCACAGTGAGAGGACAAGCCAAAGCTCGAGCATTGCCACCAAAGAAAGCATCGGTAAGACAAACACAAAAGACCAATTCAAAGCCTTCATTTGCTCTGAAGCAGAAAGAAAACTCAAAGCCTAAAGCAGCAGCAGCAGCAGCCAAAGAGGAGACAAAAGCAGAGGTAAGGAAAGTTTTTGGTGGTCTCTTTAAGCAAGAAACCATATATGTGGATGATGATTAGGAAGAATATTGTTTCTCTGACTTATTATGACTGATTGAACTCTTTGAAGAGCTTATTTTATTTGTGTATTTAAATTGTAATCTATATATGTATCTTGTTTTATAAGGGTTGGTTATTTGGTTTTACAAGTTTCTGCAAAGAATATGTGAGCTTCTTGTGTGATCGTGACATTCATATAATTGTTTTTGGCAATTGAGAAGCAAATTATCCAACTCAAATGAATTAAATATTGCTTTTGCTTTACGGC

mRNA sequence

AAGTAATACACGTGGCATTCTTTTATTTGCTTAGTTTTTATTTCCCTGGATAATATTTCCAAATAATCTAAAAATTTGGATGGCGTTTGGCTACTGATTTTGGAAGCTGTGGGGACTGTTTGTTTACGAGTCCAATCAAATTCTCAGCCATGGATATCAAAGAAACTTGAAGACGATCGGTGACCAGAAACTGACCACCGACGCCGTTTCTTCTCTCACTCTCCTTGTTCCAATGGCGGCGATCATAAACTCCAATTCATTTATCTTAACCACCGCCCCAAACACCCGACGAAGCTTCAAGAGCCACCGGAGACAGTTCGCCGTCTACGCCAAGAGTTCTGGAACATTCCCTCCTTTTCGTCTAGGGAAATCGAGCAATGAATCGCCGTCTTCCGACGAAGCTTCGGCTGAAGATTCCGGTAATTCGAATCCGTTTCGTTTCGCTTTTGGAAAGGTACCGGATGTGAAGTCTCTGATTCCAGTCGTTAATGAGCCTTCGTCGGGCTTGTCGTTCGGGAATGCGAGGCGGAAGGATACTAATACGGTGTTTGTCGCCGGCGCTACTGGTCTGGCTGGCATTCGGTTAGCGCAGACGCTGTTGCGAGAAGGTTTCAGTGTTCGTGCTGGTGTGCCGGAGCTTGGTGCTGCGCAAGAATTGGCTCGTCTTGCTGCCAAGTATAAGGTCATATCGAATGAAGAATCAAAGCGGCTCAACGCCGTCGAATCCTCCTTTCAAGACGCGGAAGCGATTGCCAAGGCGATCGGAAACGCCAGTAAAGTAGTTGTCACTATTGGCGCCGGAGAAAACGGTCCGACCTCCGAAGTTACCACATCGGACGCTTTGCAAGTAATTCAGGCAGCGCAGCTCGCCGGAGTAAGCCATGTGGCAATCGTATACGACGGCAATGCTTCAAGCTCCTCCACCTACAATGTACTCGACGGGCTTTCGTCATTCTTCAACAATCTTTTCACCCGATCTCAGTCATTGTCCGTTGTGGAGCTCTTGCAGAAAATAGCCGAAACCGATGTCGGCTATACGTTCATCAAGACGAATTTGGCTGAAGACTTTGCGCCTGAGCGGGCCTATAACGTCGTCGTCGGAGCTGAAGGAAGCGTTAGTTCCAACGACTACAAAGTGGCGAAGTCACAGATAGCATCGTTGGTGGCCGGCGTTTTCTCGAACACGGCGGTGGCCGAGAACAAGGTTGTGGAAGTGTATTCTAGTCCATCTGCACCCTCAAGTTCAGTAGATCAACTGTTCAGTGCCATTCCCACGGATGGTAGAAGACAAGCTTATGCAGAAGCACAAGCCAAGGCAAAAGCCGAGGAAGAAGCCATAAGAACTGCTGAAAAAGCTCGTGAAGAGGCAGAAGCCGCAAAGAAACAGGAAGTGGAGGCTGCTAAAGCCAAAAGACTCTCAGAAAAGGCAGCCGCCCAAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGAATCCCAAAAGCAAGAATCTGATCAAATCGCTTTCTTTAATTCATTCTTGAACAAAGCCAAGGACTTTAGTTCAGAACAATCCCAAAAGCTCAAAAAGCTCTCAGAAAAGGAACCTCAAGCAGCTGAAGAAGAAGAGGCCCCAGAAAAGGCTGACAATGGAGCCAATTTAGTGAACAACTTTTTCAACAAAGCCAAAGGCTTCGGCTCGGCGCAGCCATGGGAGAAGCTATCTTTTCAACTACAAAAACCATCTGAGGAATCAAATGCTCAAATAGCCACAGTGAGAGGACAAGCCAAAGCTCGAGCATTGCCACCAAAGAAAGCATCGGTAAGACAAACACAAAAGACCAATTCAAAGCCTTCATTTGCTCTGAAGCAGAAAGAAAACTCAAAGCCTAAAGCAGCAGCAGCAGCAGCCAAAGAGGAGACAAAAGCAGAGGTAAGGAAAGTTTTTGGTGGTCTCTTTAAGCAAGAAACCATATATGTGGATGATGATTAGGAAGAATATTGTTTCTCTGACTTATTATGACTGATTGAACTCTTTGAAGAGCTTATTTTATTTGTGTATTTAAATTGTAATCTATATATGTATCTTGTTTTATAAGGGTTGGTTATTTGGTTTTACAAGTTTCTGCAAAGAATATGTGAGCTTCTTGTGTGATCGTGACATTCATATAATTGTTTTTGGCAATTGAGAAGCAAATTATCCAACTCAAATGAATTAAATATTGCTTTTGCTTTACGGC

Coding sequence (CDS)

ATGGCGGCGATCATAAACTCCAATTCATTTATCTTAACCACCGCCCCAAACACCCGACGAAGCTTCAAGAGCCACCGGAGACAGTTCGCCGTCTACGCCAAGAGTTCTGGAACATTCCCTCCTTTTCGTCTAGGGAAATCGAGCAATGAATCGCCGTCTTCCGACGAAGCTTCGGCTGAAGATTCCGGTAATTCGAATCCGTTTCGTTTCGCTTTTGGAAAGGTACCGGATGTGAAGTCTCTGATTCCAGTCGTTAATGAGCCTTCGTCGGGCTTGTCGTTCGGGAATGCGAGGCGGAAGGATACTAATACGGTGTTTGTCGCCGGCGCTACTGGTCTGGCTGGCATTCGGTTAGCGCAGACGCTGTTGCGAGAAGGTTTCAGTGTTCGTGCTGGTGTGCCGGAGCTTGGTGCTGCGCAAGAATTGGCTCGTCTTGCTGCCAAGTATAAGGTCATATCGAATGAAGAATCAAAGCGGCTCAACGCCGTCGAATCCTCCTTTCAAGACGCGGAAGCGATTGCCAAGGCGATCGGAAACGCCAGTAAAGTAGTTGTCACTATTGGCGCCGGAGAAAACGGTCCGACCTCCGAAGTTACCACATCGGACGCTTTGCAAGTAATTCAGGCAGCGCAGCTCGCCGGAGTAAGCCATGTGGCAATCGTATACGACGGCAATGCTTCAAGCTCCTCCACCTACAATGTACTCGACGGGCTTTCGTCATTCTTCAACAATCTTTTCACCCGATCTCAGTCATTGTCCGTTGTGGAGCTCTTGCAGAAAATAGCCGAAACCGATGTCGGCTATACGTTCATCAAGACGAATTTGGCTGAAGACTTTGCGCCTGAGCGGGCCTATAACGTCGTCGTCGGAGCTGAAGGAAGCGTTAGTTCCAACGACTACAAAGTGGCGAAGTCACAGATAGCATCGTTGGTGGCCGGCGTTTTCTCGAACACGGCGGTGGCCGAGAACAAGGTTGTGGAAGTGTATTCTAGTCCATCTGCACCCTCAAGTTCAGTAGATCAACTGTTCAGTGCCATTCCCACGGATGGTAGAAGACAAGCTTATGCAGAAGCACAAGCCAAGGCAAAAGCCGAGGAAGAAGCCATAAGAACTGCTGAAAAAGCTCGTGAAGAGGCAGAAGCCGCAAAGAAACAGGAAGTGGAGGCTGCTAAAGCCAAAAGACTCTCAGAAAAGGCAGCCGCCCAAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGAATCCCAAAAGCAAGAATCTGATCAAATCGCTTTCTTTAATTCATTCTTGAACAAAGCCAAGGACTTTAGTTCAGAACAATCCCAAAAGCTCAAAAAGCTCTCAGAAAAGGAACCTCAAGCAGCTGAAGAAGAAGAGGCCCCAGAAAAGGCTGACAATGGAGCCAATTTAGTGAACAACTTTTTCAACAAAGCCAAAGGCTTCGGCTCGGCGCAGCCATGGGAGAAGCTATCTTTTCAACTACAAAAACCATCTGAGGAATCAAATGCTCAAATAGCCACAGTGAGAGGACAAGCCAAAGCTCGAGCATTGCCACCAAAGAAAGCATCGGTAAGACAAACACAAAAGACCAATTCAAAGCCTTCATTTGCTCTGAAGCAGAAAGAAAACTCAAAGCCTAAAGCAGCAGCAGCAGCAGCCAAAGAGGAGACAAAAGCAGAGGTAAGGAAAGTTTTTGGTGGTCTCTTTAAGCAAGAAACCATATATGTGGATGATGATTAG

Protein sequence

MAAIINSNSFILTTAPNTRRSFKSHRRQFAVYAKSSGTFPPFRLGKSSNESPSSDEASAEDSGNSNPFRFAFGKVPDVKSLIPVVNEPSSGLSFGNARRKDTNTVFVAGATGLAGIRLAQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGLSSFFNNLFTRSQSLSVVELLQKIAETDVGYTFIKTNLAEDFAPERAYNVVVGAEGSVSSNDYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEAQAKAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKAAAQASSSSSSSSSESQKQESDQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQAAEEEEAPEKADNGANLVNNFFNKAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASVRQTQKTNSKPSFALKQKENSKPKAAAAAAKEETKAEVRKVFGGLFKQETIYVDDD

Homology

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BLAST of Lsi10G014020 vs. ExPASy Swiss-Prot
Match: Q9STF2 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC16 PE=1 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 1.2e-138
Identity = 317/584 (54.28%), Postives = 391/584 (66.95%), Query Frame = 0


Query: 6   NSNSFILTTAPNTRRSFKSHRRQFAVYAKSSGTFPPFRLGKSSNESPSSDEASAEDSGNS 65
           +S SF LTTAP     F   + +  V+AK +     F+LGK+  +    D++  +  G  
Sbjct: 4   SSTSFPLTTAPPQGVRFNRRKPRLTVWAKQTA----FQLGKTKGD----DDSEGKQKG-K 63

Query: 66  NPFRFAFGKVPDVKSLIPVVNEPSSGLSFGNARRKDTNTVFVAGATGLAGIRLAQTLLRE 125
           NPF+F FGK+PD+KSLIPVV  PS+GL FGN R+KD  T+FVAGATG AGIR+AQTLL+ 
Sbjct: 64  NPFQFDFGKLPDMKSLIPVVTNPSTGLVFGNNRKKDPGTIFVAGATGQAGIRIAQTLLQR 123

Query: 126 GFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNASKVVV 185
           GFSVRAGVP+LGAAQ+LAR+AA YK++SN+E KRLNAV+S FQDAE+IAKAIGNA+KVVV
Sbjct: 124 GFSVRAGVPDLGAAQDLARVAATYKILSNDEVKRLNAVQSPFQDAESIAKAIGNATKVVV 183

Query: 186 TIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGLSSFFNNL 245
           T+GA ENGP ++V+TSDAL V+QAA+LAGVSHVAIVYDG   S STYNVLDG++SFF NL
Sbjct: 184 TVGATENGPDAQVSTSDALLVVQAAELAGVSHVAIVYDGTI-SGSTYNVLDGITSFFGNL 243

Query: 246 FTRSQSLSVVELLQKIAETDVGYTFIKTNLAEDFAPERAYNVVVGAE------GSVSSND 305
           F +SQ L++ +L++K+A+TDV YT IKT+L EDF+PE+AYNVVV AE      GS SS  
Sbjct: 244 FAKSQPLTISDLIEKVAQTDVAYTLIKTSLTEDFSPEKAYNVVVSAEGSNSGSGSSSSEA 303

Query: 306 YKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEAQ 365
           YKV K +IASLVA +F+NTAVAENKVVEV + PSAPS  VD+LFS IP DGRR+ YA+A 
Sbjct: 304 YKVPKLKIASLVADIFANTAVAENKVVEVSTDPSAPSRPVDELFSVIPEDGRRKVYADAI 363

Query: 366 AKAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKAAAQASSSSSSSSSESQKQES 425
           A+ +AEEEA   A+KARE AEAAK+ E                                 
Sbjct: 364 ARERAEEEAKVAADKAREAAEAAKEFE--------------------------------- 423

Query: 426 DQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQAAE-EEEAPEKADNGANLVNNFFNKAK 485
                                ++++KLSEKE +AA   E+A +KAD     V+  FNKAK
Sbjct: 424 ---------------------KQMQKLSEKEAEAASLAEDAQQKADAVGVTVDGLFNKAK 483

Query: 486 GFGSAQPWEKLSFQ----LQKPSEESNAQIATVRGQAKARALPPKKASVRQTQKTNSKPS 545
              S   W KL  Q    +Q  SE    Q+ATVRGQAKAR LPPKKA V+Q   +     
Sbjct: 484 DISSGLSWNKLGSQFATAIQNASETPKVQVATVRGQAKARNLPPKKAVVKQRPSS----P 510

Query: 546 FALKQKENSKPKAAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 579
           FA K KE  +PK        + + EVRKVFGGLFKQETIY+DDD
Sbjct: 544 FASKPKE-ERPK--------KPEKEVRKVFGGLFKQETIYIDDD 510

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BLAST of Lsi10G014020 vs. ExPASy TrEMBL
Match: A0A0A0KC77 (NAD(P)-bd_dom domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G188160 PE=4 SV=1)

HSP 1 Score: 921.0 bits (2379), Expect = 2.5e-264
Identity = 526/583 (90.22%), Postives = 544/583 (93.31%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNTRRSFKSHRRQFAVYAKSSGTFPPFRLGKSSNESPSSDEASAE 60
           MAAIINSNSFILTT PNTRRSFKSHRRQ AV+AK+SG+F  FRLGKSSNESPSSD+A  E
Sbjct: 1   MAAIINSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVE 60

Query: 61  DSGNSNPFRFAFGKVPDVKSLIPVVNEPSSGLSFGNARRKDTNTVFVAGATGLAGIRLAQ 120
           DSGNSNPFRF+FGKVPDVKSLIPVV+EPSSGLSFG++RRKD+NTVFVAGATG AGIRLAQ
Sbjct: 61  DSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQ 120

Query: 121 TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA 180
           TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA
Sbjct: 121 TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA 180

Query: 181 SKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGLSS 240
           SKVVVTIG GENGPTSEVTTSDALQVIQAAQLAGVSHVA+VYDGNASSSSTYNVLDGLSS
Sbjct: 181 SKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSS 240

Query: 241 FFNNLFTRSQSLSVVELLQKIAETDVGYTFIKTNLAEDFAPERAYNVVVGAEGSVSSNDY 300
           FFNNLF+RSQ LSVVELLQKI ETD+GYTFIKTNL EDFAPERAYNVVV AEGS SSNDY
Sbjct: 241 FFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSNDY 300

Query: 301 KVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEAQA 360
           KVA+SQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFS IPTDGRRQAYAEA+A
Sbjct: 301 KVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYAEAKA 360

Query: 361 KAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKAAAQASSSSSSSSSESQ--KQE 420
           KAKAEEEAIR AE AREEAEA KKQEVEAAK+KRLSEKAA Q SSSSSSSSS S    +E
Sbjct: 361 KAKAEEEAIRIAENAREEAEATKKQEVEAAKSKRLSEKAATQPSSSSSSSSSSSSPPAEE 420

Query: 421 SDQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQAAEEEEAPEKADNGANLVNNFFNKAK 480
           SDQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQ  EE    E  D   NLVNNFFNKAK
Sbjct: 421 SDQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEE----ESPDTAGNLVNNFFNKAK 480

Query: 481 GFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASVRQTQKTNSKPSFALK 540
           GFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKAS+RQTQKTNSKPSF LK
Sbjct: 481 GFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGLK 540

Query: 541 QKENSKPKA---AAAAAKEETKAEVRKVFGGLFKQETIYVDDD 579
           QKENSKPKA   AAAAAKEETKAEVRKVFGGLFKQETIYVDD+
Sbjct: 541 QKENSKPKAAATAAAAAKEETKAEVRKVFGGLFKQETIYVDDE 579

[Close]

BLAST of Lsi10G014020 vs. ExPASy TrEMBL
Match: A0A5D3CYY3 (Protein plastid transcriptionally active 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00290 PE=4 SV=1)

HSP 1 Score: 900.2 bits (2325), Expect = 4.5e-258
Identity = 525/588 (89.29%), Postives = 540/588 (91.84%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNTRRSFKSH-RRQFAVYAKSSGTFPPFRLGKSSNESP-SSDEAS 60
           MAAIINSNSFILTT PN RRSFK+H RRQFAV+AK+SG+F  FRLGKSSNESP SSD+  
Sbjct: 1   MAAIINSNSFILTTTPNARRSFKTHDRRQFAVHAKNSGSFSSFRLGKSSNESPSSSDDPP 60

Query: 61  AEDSGNSNPFRFAFGKVPDVKSLIPVVNEPSSGLSFGNARRKDTNTVFVAGATGLAGIRL 120
            EDSGNSNPFRF FGKVPDVKSLIPVV+EPSSGLSFGN+RRKD+NTVFVAGATG AGIRL
Sbjct: 61  LEDSGNSNPFRFPFGKVPDVKSLIPVVSEPSSGLSFGNSRRKDSNTVFVAGATGQAGIRL 120

Query: 121 AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG 180
           AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG
Sbjct: 121 AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG 180

Query: 181 NASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGL 240
           NASKVVVTIGAGENGPTSEVTTSDALQVIQAA+LAGVSHVA+VYDGN SSSSTYNVLDGL
Sbjct: 181 NASKVVVTIGAGENGPTSEVTTSDALQVIQAAELAGVSHVAVVYDGNTSSSSTYNVLDGL 240

Query: 241 SSFFNNLFTRSQSLSVVELLQKIAETDVGYTFIKTNLAEDFAPERAYNVVVGAEGSVSSN 300
           SSFFNNLF+RSQ LSVVELLQKIAETD+GYTFIKTNL EDFAPERAYNVVV AEGS SSN
Sbjct: 241 SSFFNNLFSRSQPLSVVELLQKIAETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSN 300

Query: 301 DYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEA 360
           DYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSA SSSVDQLFS IPTDGRRQAYAE 
Sbjct: 301 DYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSASSSSVDQLFSVIPTDGRRQAYAE- 360

Query: 361 QAKAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKAAAQASSSSSSSSSESQK-- 420
            AKAKAEEEA+R AEKAREEAEA KKQEVEAAK+KR SEKAA Q SSSSSSSSS S    
Sbjct: 361 -AKAKAEEEAMRIAEKAREEAEATKKQEVEAAKSKRPSEKAATQPSSSSSSSSSFSSSPP 420

Query: 421 -----QESDQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQAAEEEEAPEKADNGANLVN 480
                QESDQIAFFNSFLNKAKDFSSEQS KLKKLSEKEPQ  EE    E  D  ANLVN
Sbjct: 421 PPPLAQESDQIAFFNSFLNKAKDFSSEQSLKLKKLSEKEPQETEE----ESPDTAANLVN 480

Query: 481 NFFNKAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASVRQTQKTNS 540
           NFFNKAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKAS+RQTQKTNS
Sbjct: 481 NFFNKAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASIRQTQKTNS 540

Query: 541 KPSFALKQKENSKPK-AAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 579
           KPSF LKQKENSKPK AAAAAAKEETKAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 KPSFGLKQKENSKPKAAAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 582

[Close]

BLAST of Lsi10G014020 vs. ExPASy TrEMBL
Match: A0A1S3CL46 (protein plastid transcriptionally active 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502056 PE=4 SV=1)

HSP 1 Score: 900.2 bits (2325), Expect = 4.5e-258
Identity = 525/588 (89.29%), Postives = 540/588 (91.84%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNTRRSFKSH-RRQFAVYAKSSGTFPPFRLGKSSNESP-SSDEAS 60
           MAAIINSNSFILTT PN RRSFK+H RRQFAV+AK+SG+F  FRLGKSSNESP SSD+  
Sbjct: 1   MAAIINSNSFILTTTPNARRSFKTHDRRQFAVHAKNSGSFSSFRLGKSSNESPSSSDDPP 60

Query: 61  AEDSGNSNPFRFAFGKVPDVKSLIPVVNEPSSGLSFGNARRKDTNTVFVAGATGLAGIRL 120
            EDSGNSNPFRF FGKVPDVKSLIPVV+EPSSGLSFGN+RRKD+NTVFVAGATG AGIRL
Sbjct: 61  LEDSGNSNPFRFPFGKVPDVKSLIPVVSEPSSGLSFGNSRRKDSNTVFVAGATGQAGIRL 120

Query: 121 AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG 180
           AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG
Sbjct: 121 AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG 180

Query: 181 NASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGL 240
           NASKVVVTIGAGENGPTSEVTTSDALQVIQAA+LAGVSHVA+VYDGN SSSSTYNVLDGL
Sbjct: 181 NASKVVVTIGAGENGPTSEVTTSDALQVIQAAELAGVSHVAVVYDGNTSSSSTYNVLDGL 240

Query: 241 SSFFNNLFTRSQSLSVVELLQKIAETDVGYTFIKTNLAEDFAPERAYNVVVGAEGSVSSN 300
           SSFFNNLF+RSQ LSVVELLQKIAETD+GYTFIKTNL EDFAPERAYNVVV AEGS SSN
Sbjct: 241 SSFFNNLFSRSQPLSVVELLQKIAETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSN 300

Query: 301 DYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEA 360
           DYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSA SSSVDQLFS IPTDGRRQAYAE 
Sbjct: 301 DYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSASSSSVDQLFSVIPTDGRRQAYAE- 360

Query: 361 QAKAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKAAAQASSSSSSSSSESQK-- 420
            AKAKAEEEA+R AEKAREEAEA KKQEVEAAK+KR SEKAA Q SSSSSSSSS S    
Sbjct: 361 -AKAKAEEEAMRIAEKAREEAEATKKQEVEAAKSKRPSEKAATQPSSSSSSSSSFSSSPP 420

Query: 421 -----QESDQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQAAEEEEAPEKADNGANLVN 480
                QESDQIAFFNSFLNKAKDFSSEQS KLKKLSEKEPQ  EE    E  D  ANLVN
Sbjct: 421 PPPLAQESDQIAFFNSFLNKAKDFSSEQSLKLKKLSEKEPQETEE----ESPDTAANLVN 480

Query: 481 NFFNKAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASVRQTQKTNS 540
           NFFNKAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKAS+RQTQKTNS
Sbjct: 481 NFFNKAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASIRQTQKTNS 540

Query: 541 KPSFALKQKENSKPK-AAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 579
           KPSF LKQKENSKPK AAAAAAKEETKAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 KPSFGLKQKENSKPKAAAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 582

[Close]

BLAST of Lsi10G014020 vs. ExPASy TrEMBL
Match: A0A6J1KZG1 (protein plastid transcriptionally active 16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499653 PE=4 SV=1)

HSP 1 Score: 839.0 bits (2166), Expect = 1.2e-239
Identity = 487/583 (83.53%), Postives = 523/583 (89.71%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNTRRSFKSH-RRQFAVYAKSSGTFPPFRLGKSSNESPSSDEASA 60
           MAAIINSNSFILTTAPN RRSF ++ RRQF+VYAKSSGTF  FRLGKSSN SPSSD A A
Sbjct: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60

Query: 61  EDSGNSNPFRFAFGKVPDVKSLIPVVNEPSSGLSFGNARRKDTNTVFVAGATGLAGIRLA 120
           EDSGNSNP+RF FGK+PDVKSLIPVV+E SSGLSFGN+RRKD NTVFVAGA+G AGIRLA
Sbjct: 61  EDSGNSNPYRFNFGKIPDVKSLIPVVSETSSGLSFGNSRRKDPNTVFVAGASGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGN 180
           QTLLREGFSVRAGVPEL AAQELARLAAKYKVISNEESKRLNAVESSFQDAE+IAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180

Query: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGLS 240
           ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGV HVAIVYDGNAS+SST NVLDG+S
Sbjct: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGIS 240

Query: 241 SFFNNLFTRSQSLSVVELLQKIAETDVGYTFIKTNLAEDFAPERAYNVVVGAEGSVSSND 300
           SFFNNLF+RSQ+LSVVELLQKI ETD+ YTFIK NLAEDF PERAYNVVVGAEGS SSND
Sbjct: 241 SFFNNLFSRSQALSVVELLQKIVETDLSYTFIKANLAEDFEPERAYNVVVGAEGSASSND 300

Query: 301 YKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEAQ 360
           YKVAKS+IASLVAGVFSNTAVAENKVVEVYS+PSAPSSSV+QLFSAIPTDGRRQAYAEAQ
Sbjct: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSAPSSSVEQLFSAIPTDGRRQAYAEAQ 360

Query: 361 AKAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKAAAQASSSSSSSSSESQKQES 420
           AKAKAEEEAIRTAE+AREEAEAAKKQ++EAAKA++ ++ AA          + ESQKQES
Sbjct: 361 AKAKAEEEAIRTAEQAREEAEAAKKQQLEAAKAEKTAQAAAV---------AEESQKQES 420

Query: 421 DQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQA---AEEEEAPEKADNGA-NLVNNFFN 480
           D++AFFN+ LNKAKDFSSEQSQKLKKLSEKEP+A    + EEAPEKAD+ A +LVNNF +
Sbjct: 421 DEVAFFNTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKADSAAGSLVNNFLS 480

Query: 481 KAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASVRQTQKTNSKPSF 540
           KAKGFG  QPWEKL+FQL K SEESN QIATVRGQAKAR+LP KKA+VRQ   TNSKPSF
Sbjct: 481 KAKGFGLQQPWEKLAFQLPKQSEESNVQIATVRGQAKARSLPSKKAAVRQAM-TNSKPSF 540

Query: 541 ALKQKENSKPKAAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 579
           A K KENSKPK      KEE KAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 AAKSKENSKPK-----PKEEAKAEVRKVFGGLFKQETIYVDDD 568

[Close]

BLAST of Lsi10G014020 vs. ExPASy TrEMBL
Match: A0A6J1G4Z0 (protein plastid transcriptionally active 16, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450967 PE=4 SV=1)

HSP 1 Score: 836.3 bits (2159), Expect = 8.0e-239
Identity = 489/583 (83.88%), Postives = 521/583 (89.37%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNTRRSFKSH-RRQFAVYAKSSGTFPPFRLGKSSNESPSSDEASA 60
           MAAIINSNSFILTTAPN RRSF ++ RRQF+VYAKSSGTF  FRLGKSSN SPSSD A A
Sbjct: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60

Query: 61  EDSGNSNPFRFAFGKVPDVKSLIPVVNEPSSGLSFGNARRKDTNTVFVAGATGLAGIRLA 120
           EDSGNSNPFRF FGK+PDVKSLIPVV++ SSGLSFGNARRKD NTVFVAGA+G AGIRLA
Sbjct: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGN 180
           QTLLREGFSVRAGVPEL AAQELARLAAKYKVISNEESKRLNAVESSFQDAE+IAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180

Query: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGLS 240
           ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGV HVAIVYDGNAS+SST NVLDGLS
Sbjct: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS 240

Query: 241 SFFNNLFTRSQSLSVVELLQKIAETDVGYTFIKTNLAEDFAPERAYNVVVGAEGSVSSND 300
           SFFNNLF+RSQ LSVVELLQKI ETDV YTFIK NL EDF PERAYNVVV AEGS SSND
Sbjct: 241 SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLVEDFEPERAYNVVVRAEGSASSND 300

Query: 301 YKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEAQ 360
           YKVAKS+IASLVAGVFSNTAVAENKVVEVYS+PSA SSSV+QLFSAIPTDGRRQAYAEAQ
Sbjct: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSALSSSVEQLFSAIPTDGRRQAYAEAQ 360

Query: 361 AKAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKAAAQASSSSSSSSSESQKQES 420
           AKAKAEEEAIRTAEKAREEAEAAKKQ++EAAKA++ ++ AAA A       + ESQKQES
Sbjct: 361 AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAAA------VAEESQKQES 420

Query: 421 DQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQA---AEEEEAPEKADNGA-NLVNNFFN 480
           D++AFFN+ LNKAKDFSSEQSQKLKKLSEKEP+A    + EEAPEK D+ A +LVNNF +
Sbjct: 421 DEVAFFNTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKVDSAAGSLVNNFLS 480

Query: 481 KAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASVRQTQKTNSKPSF 540
           KAKGFGS QPW+KL+FQL K  EESN QIATVRGQAKAR+LP KKA+VRQ   TNSKPSF
Sbjct: 481 KAKGFGSQQPWDKLAFQLPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAM-TNSKPSF 540

Query: 541 ALKQKENSKPKAAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 579
           A K KENSKPK     AKEE KAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 AAKSKENSKPK-----AKEEAKAEVRKVFGGLFKQETIYVDDD 571

[Close]

BLAST of Lsi10G014020 vs. NCBI nr
Match: XP_038901316.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic [Benincasa hispida])

HSP 1 Score: 961.8 bits (2485), Expect = 2.6e-276
Identity = 551/579 (95.16%), Postives = 559/579 (96.55%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNTRRSFKSHRRQFAVYAKSSGTFPPFRLGKSSNESPSSDEASAE 60
           MAAIINSNSFILTTAPN RRSFKSHRRQFAVYAKSSGTF  FRLGKSSNESPSSD+A AE
Sbjct: 1   MAAIINSNSFILTTAPNARRSFKSHRRQFAVYAKSSGTFSSFRLGKSSNESPSSDDAPAE 60

Query: 61  DSGNSNPFRFAFGKVPDVKSLIPVVNEPSSGLSFGNARRKDTNTVFVAGATGLAGIRLAQ 120
           DS NSNPFRFAFGKVPDVKSLIPVV EPSSGLSFGNARRKD+NTVFVAGATG AGIRLAQ
Sbjct: 61  DSANSNPFRFAFGKVPDVKSLIPVVGEPSSGLSFGNARRKDSNTVFVAGATGQAGIRLAQ 120

Query: 121 TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA 180
           TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA
Sbjct: 121 TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA 180

Query: 181 SKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGLSS 240
           SKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGLSS
Sbjct: 181 SKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGLSS 240

Query: 241 FFNNLFTRSQSLSVVELLQKIAETDVGYTFIKTNLAEDFAPERAYNVVVGAEGSVSSNDY 300
           FFNNLF+RSQ LSVVELLQKIAETDVGYTFIKTNL EDFAPERAYNVVVGAEGSVSSNDY
Sbjct: 241 FFNNLFSRSQPLSVVELLQKIAETDVGYTFIKTNLVEDFAPERAYNVVVGAEGSVSSNDY 300

Query: 301 KVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEAQA 360
           KVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEAQA
Sbjct: 301 KVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEAQA 360

Query: 361 KAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKAAAQASSSSSSS-SSESQKQES 420
           KAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEK AAQAS SSSSS + ESQKQES
Sbjct: 361 KAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKVAAQASPSSSSSLTEESQKQES 420

Query: 421 DQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQAAEEEEAPEKADNGANLVNNFFNKAKG 480
           DQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEP+ A +EEAPEKADNGANLVN+FFNKAKG
Sbjct: 421 DQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPRPA-KEEAPEKADNGANLVNDFFNKAKG 480

Query: 481 FGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASVRQTQKTNSKPSFALKQ 540
           FGSAQPWEKL+FQL K SEESNAQIATVRGQAKARALPPKKASVRQTQKTNSKPSFALKQ
Sbjct: 481 FGSAQPWEKLAFQLPKASEESNAQIATVRGQAKARALPPKKASVRQTQKTNSKPSFALKQ 540

Query: 541 KENSKPKAAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 579
           KENSKPK   AAAKEETKAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 KENSKPK---AAAKEETKAEVRKVFGGLFKQETIYVDDD 575

[Close]

BLAST of Lsi10G014020 vs. NCBI nr
Match: XP_004143209.2 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic [Cucumis sativus] >XP_031743655.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic-like [Cucumis sativus] >KAE8645884.1 hypothetical protein Csa_017686 [Cucumis sativus] >KGN47123.1 hypothetical protein Csa_020763 [Cucumis sativus])

HSP 1 Score: 921.0 bits (2379), Expect = 5.1e-264
Identity = 526/583 (90.22%), Postives = 544/583 (93.31%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNTRRSFKSHRRQFAVYAKSSGTFPPFRLGKSSNESPSSDEASAE 60
           MAAIINSNSFILTT PNTRRSFKSHRRQ AV+AK+SG+F  FRLGKSSNESPSSD+A  E
Sbjct: 1   MAAIINSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVE 60

Query: 61  DSGNSNPFRFAFGKVPDVKSLIPVVNEPSSGLSFGNARRKDTNTVFVAGATGLAGIRLAQ 120
           DSGNSNPFRF+FGKVPDVKSLIPVV+EPSSGLSFG++RRKD+NTVFVAGATG AGIRLAQ
Sbjct: 61  DSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQ 120

Query: 121 TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA 180
           TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA
Sbjct: 121 TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA 180

Query: 181 SKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGLSS 240
           SKVVVTIG GENGPTSEVTTSDALQVIQAAQLAGVSHVA+VYDGNASSSSTYNVLDGLSS
Sbjct: 181 SKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSS 240

Query: 241 FFNNLFTRSQSLSVVELLQKIAETDVGYTFIKTNLAEDFAPERAYNVVVGAEGSVSSNDY 300
           FFNNLF+RSQ LSVVELLQKI ETD+GYTFIKTNL EDFAPERAYNVVV AEGS SSNDY
Sbjct: 241 FFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSNDY 300

Query: 301 KVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEAQA 360
           KVA+SQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFS IPTDGRRQAYAEA+A
Sbjct: 301 KVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYAEAKA 360

Query: 361 KAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKAAAQASSSSSSSSSESQ--KQE 420
           KAKAEEEAIR AE AREEAEA KKQEVEAAK+KRLSEKAA Q SSSSSSSSS S    +E
Sbjct: 361 KAKAEEEAIRIAENAREEAEATKKQEVEAAKSKRLSEKAATQPSSSSSSSSSSSSPPAEE 420

Query: 421 SDQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQAAEEEEAPEKADNGANLVNNFFNKAK 480
           SDQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQ  EE    E  D   NLVNNFFNKAK
Sbjct: 421 SDQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEE----ESPDTAGNLVNNFFNKAK 480

Query: 481 GFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASVRQTQKTNSKPSFALK 540
           GFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKAS+RQTQKTNSKPSF LK
Sbjct: 481 GFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGLK 540

Query: 541 QKENSKPKA---AAAAAKEETKAEVRKVFGGLFKQETIYVDDD 579
           QKENSKPKA   AAAAAKEETKAEVRKVFGGLFKQETIYVDD+
Sbjct: 541 QKENSKPKAAATAAAAAKEETKAEVRKVFGGLFKQETIYVDDE 579

[Close]

BLAST of Lsi10G014020 vs. NCBI nr
Match: XP_008464084.1 (PREDICTED: protein plastid transcriptionally active 16, chloroplastic [Cucumis melo] >KAA0061867.1 protein plastid transcriptionally active 16 [Cucumis melo var. makuwa] >TYK15389.1 protein plastid transcriptionally active 16 [Cucumis melo var. makuwa])

HSP 1 Score: 900.2 bits (2325), Expect = 9.3e-258
Identity = 525/588 (89.29%), Postives = 540/588 (91.84%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNTRRSFKSH-RRQFAVYAKSSGTFPPFRLGKSSNESP-SSDEAS 60
           MAAIINSNSFILTT PN RRSFK+H RRQFAV+AK+SG+F  FRLGKSSNESP SSD+  
Sbjct: 1   MAAIINSNSFILTTTPNARRSFKTHDRRQFAVHAKNSGSFSSFRLGKSSNESPSSSDDPP 60

Query: 61  AEDSGNSNPFRFAFGKVPDVKSLIPVVNEPSSGLSFGNARRKDTNTVFVAGATGLAGIRL 120
            EDSGNSNPFRF FGKVPDVKSLIPVV+EPSSGLSFGN+RRKD+NTVFVAGATG AGIRL
Sbjct: 61  LEDSGNSNPFRFPFGKVPDVKSLIPVVSEPSSGLSFGNSRRKDSNTVFVAGATGQAGIRL 120

Query: 121 AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG 180
           AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG
Sbjct: 121 AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG 180

Query: 181 NASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGL 240
           NASKVVVTIGAGENGPTSEVTTSDALQVIQAA+LAGVSHVA+VYDGN SSSSTYNVLDGL
Sbjct: 181 NASKVVVTIGAGENGPTSEVTTSDALQVIQAAELAGVSHVAVVYDGNTSSSSTYNVLDGL 240

Query: 241 SSFFNNLFTRSQSLSVVELLQKIAETDVGYTFIKTNLAEDFAPERAYNVVVGAEGSVSSN 300
           SSFFNNLF+RSQ LSVVELLQKIAETD+GYTFIKTNL EDFAPERAYNVVV AEGS SSN
Sbjct: 241 SSFFNNLFSRSQPLSVVELLQKIAETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSN 300

Query: 301 DYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEA 360
           DYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSA SSSVDQLFS IPTDGRRQAYAE 
Sbjct: 301 DYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSASSSSVDQLFSVIPTDGRRQAYAE- 360

Query: 361 QAKAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKAAAQASSSSSSSSSESQK-- 420
            AKAKAEEEA+R AEKAREEAEA KKQEVEAAK+KR SEKAA Q SSSSSSSSS S    
Sbjct: 361 -AKAKAEEEAMRIAEKAREEAEATKKQEVEAAKSKRPSEKAATQPSSSSSSSSSFSSSPP 420

Query: 421 -----QESDQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQAAEEEEAPEKADNGANLVN 480
                QESDQIAFFNSFLNKAKDFSSEQS KLKKLSEKEPQ  EE    E  D  ANLVN
Sbjct: 421 PPPLAQESDQIAFFNSFLNKAKDFSSEQSLKLKKLSEKEPQETEE----ESPDTAANLVN 480

Query: 481 NFFNKAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASVRQTQKTNS 540
           NFFNKAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKAS+RQTQKTNS
Sbjct: 481 NFFNKAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASIRQTQKTNS 540

Query: 541 KPSFALKQKENSKPK-AAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 579
           KPSF LKQKENSKPK AAAAAAKEETKAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 KPSFGLKQKENSKPKAAAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 582

[Close]

BLAST of Lsi10G014020 vs. NCBI nr
Match: XP_023532201.1 (protein plastid transcriptionally active 16, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 847.4 bits (2188), Expect = 7.1e-242
Identity = 495/583 (84.91%), Postives = 527/583 (90.39%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNTRRSFKSH-RRQFAVYAKSSGTFPPFRLGKSSNESPSSDEASA 60
           MAAIINSNSFILTTAPN RRSF ++ RRQF+VYAKSSGTF  FRLGKSSN SPSSD A A
Sbjct: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60

Query: 61  EDSGNSNPFRFAFGKVPDVKSLIPVVNEPSSGLSFGNARRKDTNTVFVAGATGLAGIRLA 120
           EDSGNSNPFRF FGK+PDVKSLIPVV++ SSGLSFGNARRKD NTVFVAGA+G AGIRLA
Sbjct: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGN 180
           QTLLREGFSVRAGVPEL AAQELARLAAKYKVISNEESKRLNAVESSFQDAE+IAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180

Query: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGLS 240
           ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGV HVAIVYDGNAS SST NVLDGLS
Sbjct: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASKSSTNNVLDGLS 240

Query: 241 SFFNNLFTRSQSLSVVELLQKIAETDVGYTFIKTNLAEDFAPERAYNVVVGAEGSVSSND 300
           SFFNNLF+RSQ LSVVELLQKI ETDV YTFIK NLAEDF PERAYNVVVGAEGS SSND
Sbjct: 241 SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLAEDFEPERAYNVVVGAEGSASSND 300

Query: 301 YKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEAQ 360
           YKVAKS+IASLVAGVFSNTAVAENKVVEVYS+PSAPSSSV+QLFSAIPTDGRRQAYAEAQ
Sbjct: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSAPSSSVEQLFSAIPTDGRRQAYAEAQ 360

Query: 361 AKAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKAAAQASSSSSSSSSESQKQES 420
           AKA+AEEEAIRTAEKAREEAEAAKKQ++EAAKA    EK A  A++++++ S ESQKQES
Sbjct: 361 AKAQAEEEAIRTAEKAREEAEAAKKQQLEAAKA----EKTAQAAAAAAAAVSEESQKQES 420

Query: 421 DQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQA---AEEEEAPEKADNGA-NLVNNFFN 480
           D++AFFN+ LNKAKDFSSEQSQKLKKLSEKEP+A    + EEAPEKAD+ A +LVNNF +
Sbjct: 421 DEVAFFNTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKADSAAGSLVNNFLS 480

Query: 481 KAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASVRQTQKTNSKPSF 540
           KAKGFGS QPWEKL+FQL K SEESN QIATVRGQAKAR+LP KKA+VRQ   TNSKPSF
Sbjct: 481 KAKGFGSQQPWEKLAFQLPKLSEESNVQIATVRGQAKARSLPSKKAAVRQAM-TNSKPSF 540

Query: 541 ALKQKENSKPKAAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 579
           A K KENSKPK     AKEE KAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 AAKSKENSKPK-----AKEEAKAEVRKVFGGLFKQETIYVDDD 573

[Close]

BLAST of Lsi10G014020 vs. NCBI nr
Match: KAG7035386.1 (Protein plastid transcriptionally active 16, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 843.6 bits (2178), Expect = 1.0e-240
Identity = 491/583 (84.22%), Postives = 524/583 (89.88%), Query Frame = 0


Query: 1   MAAIINSNSFILTTAPNTRRSFKSH-RRQFAVYAKSSGTFPPFRLGKSSNESPSSDEASA 60
           MAAIINSNSFILTTAPN RRSF ++ RRQF+VYAKSSGTF  FRLGKSSN SPSSD A A
Sbjct: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60

Query: 61  EDSGNSNPFRFAFGKVPDVKSLIPVVNEPSSGLSFGNARRKDTNTVFVAGATGLAGIRLA 120
           EDSGNSNPFRF FGK+PDVKSLIPVV++ SSGLSFGNAR KD NTVFVAGA+G AGIRLA
Sbjct: 61  EDSGNSNPFRFDFGKIPDVKSLIPVVSDTSSGLSFGNARGKDPNTVFVAGASGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGN 180
           QTLLREGFSVRAGVPEL AAQELARLAAKYKVISNEESKRLNAVESSFQDAE+IAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180

Query: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGLS 240
           ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGV HVAIVYDGNAS+SST NVLDGLS
Sbjct: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGLS 240

Query: 241 SFFNNLFTRSQSLSVVELLQKIAETDVGYTFIKTNLAEDFAPERAYNVVVGAEGSVSSND 300
           SFFNNLF+RSQ+LSVVELLQKI ETDV YTFIK NLAEDF PERAYNVVVGAEGS SSND
Sbjct: 241 SFFNNLFSRSQALSVVELLQKIVETDVSYTFIKANLAEDFEPERAYNVVVGAEGSASSND 300

Query: 301 YKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEAQ 360
           YKVAKS+IASLVAGVFSNTAVAENKVVEVYS+PSAPSSSV+QLFSAIPTDGRRQAYAEAQ
Sbjct: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSAPSSSVEQLFSAIPTDGRRQAYAEAQ 360

Query: 361 AKAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKAAAQASSSSSSSSSESQKQES 420
           AKAKAEEEAIRTAEKAREEAEAAKKQ++EAAKA++ ++ AAA A         ESQKQES
Sbjct: 361 AKAKAEEEAIRTAEKAREEAEAAKKQQLEAAKAEKTAQAAAAVA--------EESQKQES 420

Query: 421 DQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQA---AEEEEAPEKADNGA-NLVNNFFN 480
           D++AFFN+ LNKAKDFSSEQSQKLKKLSEKEP+A    + EEAPEKAD+ A +LVNNF +
Sbjct: 421 DEVAFFNTLLNKAKDFSSEQSQKLKKLSEKEPKAPTKPKAEEAPEKADSAAGSLVNNFLS 480

Query: 481 KAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASVRQTQKTNSKPSF 540
           KAKGFGS QPW+KL+FQ+ K  EESN QIATVRGQAKAR+LP KKA+VRQ   TNSKPSF
Sbjct: 481 KAKGFGSQQPWDKLAFQIPKQPEESNVQIATVRGQAKARSLPSKKAAVRQAM-TNSKPSF 540

Query: 541 ALKQKENSKPKAAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 579
           A K KENSKPK     AKEE KAEVRKVFGGLFKQETIYVDDD
Sbjct: 541 AAKSKENSKPK-----AKEEAKAEVRKVFGGLFKQETIYVDDD 569

[Close]

BLAST of Lsi10G014020 vs. TAIR 10
Match: AT3G46780.1 (plastid transcriptionally active 16 )

HSP 1 Score: 495.0 bits (1273), Expect = 8.4e-140
Identity = 317/584 (54.28%), Postives = 391/584 (66.95%), Query Frame = 0


Query: 6   NSNSFILTTAPNTRRSFKSHRRQFAVYAKSSGTFPPFRLGKSSNESPSSDEASAEDSGNS 65
           +S SF LTTAP     F   + +  V+AK +     F+LGK+  +    D++  +  G  
Sbjct: 4   SSTSFPLTTAPPQGVRFNRRKPRLTVWAKQTA----FQLGKTKGD----DDSEGKQKG-K 63

Query: 66  NPFRFAFGKVPDVKSLIPVVNEPSSGLSFGNARRKDTNTVFVAGATGLAGIRLAQTLLRE 125
           NPF+F FGK+PD+KSLIPVV  PS+GL FGN R+KD  T+FVAGATG AGIR+AQTLL+ 
Sbjct: 64  NPFQFDFGKLPDMKSLIPVVTNPSTGLVFGNNRKKDPGTIFVAGATGQAGIRIAQTLLQR 123

Query: 126 GFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNASKVVV 185
           GFSVRAGVP+LGAAQ+LAR+AA YK++SN+E KRLNAV+S FQDAE+IAKAIGNA+KVVV
Sbjct: 124 GFSVRAGVPDLGAAQDLARVAATYKILSNDEVKRLNAVQSPFQDAESIAKAIGNATKVVV 183

Query: 186 TIGAGENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGNASSSSTYNVLDGLSSFFNNL 245
           T+GA ENGP ++V+TSDAL V+QAA+LAGVSHVAIVYDG   S STYNVLDG++SFF NL
Sbjct: 184 TVGATENGPDAQVSTSDALLVVQAAELAGVSHVAIVYDGTI-SGSTYNVLDGITSFFGNL 243

Query: 246 FTRSQSLSVVELLQKIAETDVGYTFIKTNLAEDFAPERAYNVVVGAE------GSVSSND 305
           F +SQ L++ +L++K+A+TDV YT IKT+L EDF+PE+AYNVVV AE      GS SS  
Sbjct: 244 FAKSQPLTISDLIEKVAQTDVAYTLIKTSLTEDFSPEKAYNVVVSAEGSNSGSGSSSSEA 303

Query: 306 YKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSAIPTDGRRQAYAEAQ 365
           YKV K +IASLVA +F+NTAVAENKVVEV + PSAPS  VD+LFS IP DGRR+ YA+A 
Sbjct: 304 YKVPKLKIASLVADIFANTAVAENKVVEVSTDPSAPSRPVDELFSVIPEDGRRKVYADAI 363

Query: 366 AKAKAEEEAIRTAEKAREEAEAAKKQEVEAAKAKRLSEKAAAQASSSSSSSSSESQKQES 425
           A+ +AEEEA   A+KARE AEAAK+ E                                 
Sbjct: 364 ARERAEEEAKVAADKAREAAEAAKEFE--------------------------------- 423

Query: 426 DQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQAAE-EEEAPEKADNGANLVNNFFNKAK 485
                                ++++KLSEKE +AA   E+A +KAD     V+  FNKAK
Sbjct: 424 ---------------------KQMQKLSEKEAEAASLAEDAQQKADAVGVTVDGLFNKAK 483

Query: 486 GFGSAQPWEKLSFQ----LQKPSEESNAQIATVRGQAKARALPPKKASVRQTQKTNSKPS 545
              S   W KL  Q    +Q  SE    Q+ATVRGQAKAR LPPKKA V+Q   +     
Sbjct: 484 DISSGLSWNKLGSQFATAIQNASETPKVQVATVRGQAKARNLPPKKAVVKQRPSS----P 510

Query: 546 FALKQKENSKPKAAAAAAKEETKAEVRKVFGGLFKQETIYVDDD 579
           FA K KE  +PK        + + EVRKVFGGLFKQETIY+DDD
Sbjct: 544 FASKPKE-ERPK--------KPEKEVRKVFGGLFKQETIYIDDD 510

[Close]

BLAST of Lsi10G014020 vs. TAIR 10
Match: AT2G34460.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 3.9e-04
Identity = 67/256 (26.17%), Postives = 117/256 (45.70%), Query Frame = 0


Query: 102 TNTVFVAGATGLAGIRLAQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLN 161
           T  VFVAGATG  G R+ + LL  GF+V+AGV ++  A+            S ++   L 
Sbjct: 46  TKKVFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAK-----------TSFKDDPSLQ 105

Query: 162 AVESSFQDA-EAIAKAIGNASKVVVTIGAGENG----PTSEVTTSDALQVIQAAQLAGVS 221
            V +   +  + +A+ IG+ S+ V+       G       +V     + ++ A +  GV 
Sbjct: 106 IVRADVTEGPDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVE 165

Query: 222 HVAIVYDGNASSSSTYNVLDGLSSFFNNLFTRSQSLSVVELLQK---IAETDVGYTFIKT 281
              +V     + ++   +L+  +  F NLF     L++V  LQ    I ++ + YT ++ 
Sbjct: 166 KFVLVSSILVNGAAMGQILNP-AYLFLNLF----GLTLVAKLQAEKYIKKSGINYTIVRP 225

Query: 282 NLAEDFAPERAYNVVVGAEGSVSSNDYKVAKSQIASLVAGVFSNTAVAEN---KVVEVYS 341
              ++  P    NVV+  E ++    Y+ + S+   LVA V     + E    KVVE+ +
Sbjct: 226 GGLKNDPP--TGNVVMEPEDTL----YEGSISR--DLVAEVAVEALLQEESSFKVVEIVA 277

Query: 342 SPSAPSSSVDQLFSAI 347
              AP  S   LF+++
Sbjct: 286 RAEAPKRSYKDLFASV 277

The following BLAST results are available for this feature:

BLAST of Lsi10G014020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STF2	1.2e-138	54.28	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic OS=Arabidopsis thalia...	[more]

BLAST of Lsi10G014020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC77	2.5e-264	90.22	NAD(P)-bd_dom domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G1881...	[more]
A0A5D3CYY3	4.5e-258	89.29	Protein plastid transcriptionally active 16 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CL46	4.5e-258	89.29	protein plastid transcriptionally active 16, chloroplastic OS=Cucumis melo OX=36...	[more]
A0A6J1KZG1	1.2e-239	83.53	protein plastid transcriptionally active 16, chloroplastic OS=Cucurbita maxima O...	[more]
A0A6J1G4Z0	8.0e-239	83.88	protein plastid transcriptionally active 16, chloroplastic OS=Cucurbita moschata...	[more]

BLAST of Lsi10G014020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901316.1	2.6e-276	95.16	protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic [Benincasa hispida]	[more]
XP_004143209.2	5.1e-264	90.22	protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic [Cucumis sativus] >XP...	[more]
XP_008464084.1	9.3e-258	89.29	PREDICTED: protein plastid transcriptionally active 16, chloroplastic [Cucumis m...	[more]
XP_023532201.1	7.1e-242	84.91	protein plastid transcriptionally active 16, chloroplastic [Cucurbita pepo subsp...	[more]
KAG7035386.1	1.0e-240	84.22	Protein plastid transcriptionally active 16, chloroplastic [Cucurbita argyrosper...	[more]

BLAST of Lsi10G014020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46780.1	8.4e-140	54.28	plastid transcriptionally active 16	[more]
AT2G34460.1	3.9e-04	26.17	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 355..402
None	No IPR available	GENE3D	3.40.50.720		coord: 92..337 e-value: 2.2E-17 score: 65.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 399..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 493..507
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 437..463
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 369..417
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 493..555
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 436..470
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 522..538
None	No IPR available	PANTHER	PTHR47711	PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC	coord: 438..578 coord: 1..441
IPR016040	NAD(P)-binding domain	PFAM	PF13460	NAD_binding_10	coord: 109..317 e-value: 3.8E-15 score: 56.2
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 103..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G014020.1	Lsi10G014020.1	mRNA