Lsi10G012830 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G012830
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr10: 17058913 .. 17061371 (-)
RNA-Seq ExpressionLsi10G012830
SyntenyLsi10G012830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTAAGTACAATTTGGTTTAGTTCTAAAAAAGTGATGGGATTACTAAACTTATTGTAAAATGAGATACTATACTAACACTAGGGTATAGGAAGGGGGCAAAATTTACCAATTTATGAGCTATAAGACAAAGACTTTGACTTAGATTAAGAAAAATTATATACAAAGGGTAAGATTTTAAAGTCTTGCATATCAAGTTAAAATATTGACTTTCTTTCCTAAAAAAATTTCCATTTACACCCTTGATTAAAGAGTATTAAAAAATTGTTTTATATCTAGAAAATGAGGTCTATTAATTTGAGTCGATTTAAATATAACTGGTTAAAGTATTATAATCTTAACAAAAAAAAAGTTAGAGGTTCAAATTCTTATCCTAACATACGATTGAACTAAAAAAAGAACCATTAATTTGATTGGCACAACTATACCGAAACATATTGTATAGCTTAATAGATAAGACAGTAGACACCAATTACTATTCTAAAAGGTTCAAACTCCTACTTTACCATAGTTGAATGGAAAAGAAATACAAACACTTAACATACTAAGCAGAATACAAATCCGTATAACATATATTATAAATATAATTTGAAGAACATTAACCAATTTTTAAGTAATTTGCGTAGACTAAGAAATAGAACGTGAAAAAGGGCCAAAGGCAATGCCAAGAACAAAAGGACAATACATTACAATATACAACACAAACACAGTAATGGCTATAAACTAAGGCAACAAAATCAAATTCAGCTGTCAACTTTGATGGATCTGTCCCGGTTGTTCCACAGACAAAGAACTTGGCCATCTTTGGCTTGTCTCTGTTCCCAGCAAGCCAACATCGGCTCCCACAATCTCATCTTTAACGAGTTTACTGCTACTGATTTCTGGTGTTCCAGATTCGATTGTCCCAGTTTGATGATCTTTGTTGATTTCGCTGCCACAAATTTCAGTGGACGGATTCTGAGGGGAGACTCCATTGCTGTCGTTTTGAAGTAAGCCGTAGCTAAGACTCACATCTTTCCATTCATTGTTCATAGATAGATGTTCATGCCGAGTCAAGTAACGCTTTAGTTCGACTTTGAGGTTCCTGATTGGCTGTTATAATAAACCAGTTATTAATATAACTATGACGGAAGAAACTGAATTCTGAGTAAACCCAAAAATTCGCAGAGAAATTCAGGGAGGTTCTTGTTTTTAAATGCCAACAATAAGTCGAGGCCATGAATTCAAGTCTATAATGCTGATGAATATGGGAATAGGAAAGAAGATACTAATTCCAGTTAGATGTTTCACAAGACAAGATCCTCTGTAATTTCATAACATTCTTAAAAGAAAAGGGATCTCCCCAATTCATTGAAGGATTGTTAAATGGATCTTTTCACTGGACAATCCAAACCCATATTGGCAACTCAATGTTTCACATCGAAAGAATCTGTCTTTTCTGTAGTTCGAATTAGCTATGAGCCCTGCCACTTTTTTACTAAAATGGTTCTAATGGTGGAAGAAAACCTCTCATTACTATAAACATATAAGCAACAAACAAATTAAAAGAAAACAGATAAGAATTAACGGAAAAAAACTCCAAATCGAAGAAAAAATCATAGACTAGAAAAAAAAAATCAACTATGTGAAAGTTTATTACAATCACACAAAAATCTCTCCCTAATCCTTATTATAAGAGCACTTTCAAAACATTATACAACTCACAACTAAGCTAGTACACCAAACTTAAAGTGATTCAAATTGAAATAATTTGAAACCAAAGCCGTAGGCTCCTTCTATAGTGGTTGGAGCCCAAAACTTTCTTGAACCTTTTAGATGTAGGATAATGGTCCTCTAATATTTCGTCAAAACCCAACACATTCTCTCATAATCACTTCAAAGCTGATGCAGCGGAAAAAAGGTATTAAGCCAAATCTATGAGTTTATGACCAAGTAAGAAAAATTCTATCTCAAAATGTCGAGAGAAGGCTCTCCGAAAACACTAAAATACTAACATACTAATTAAACACTAATTAACCTGAAGTAACAACTAAACAAAAATTAAAGTATAGTAATTATTCTATAATTCTCCTCATCAAAAGCTATCCAATAAACCACTTTTTACTAAAATGGTTCTAATCAAACTGCTCTTGCTAAGCTTACTTATCATAAAAAAGCACTTTCCAGATATGACAAGAGGCAAAGATAAGATGTTCAAAAATGTAATCTACATTACCTCGGCATTGCAGACATAAGCAAGGCGAAAGAAATCAGCAGACACAAAATGCTTCCCAACGGACTCAGCCAATTTGATCTGAGCAACCCAATACGATGAGGTCTCCATCTTGTCAAAACGGCAGTTACTACATTTCTCCGCCGTATGGTAAGGGGTTCCAGCGTTCTTCAATTTCAACAAACGAGGCCTCGCCACCGGCGTCTGAGGCTCTACGACGTCGTTCCCAACACGCAGATCCTTAA

mRNA sequence

ATGGAATTCGATTGTCCCAGTTTGATGATCTTTGTTGATTTCGCTGCCACAAATTTCAGTGGACGGATTCTGAGGGGAGACTCCATTGCTGTCGTTTTGAATTACTACATTTCTCCGCCGTATGGTAAGGGGTTCCAGCGTTCTTCAATTTCAACAAACGAGGCCTCGCCACCGGCGTCTGAGGCTCTACGACGTCGTTCCCAACACGCAGATCCTTAA

Coding sequence (CDS)

ATGGAATTCGATTGTCCCAGTTTGATGATCTTTGTTGATTTCGCTGCCACAAATTTCAGTGGACGGATTCTGAGGGGAGACTCCATTGCTGTCGTTTTGAATTACTACATTTCTCCGCCGTATGGTAAGGGGTTCCAGCGTTCTTCAATTTCAACAAACGAGGCCTCGCCACCGGCGTCTGAGGCTCTACGACGTCGTTCCCAACACGCAGATCCTTAA

Protein sequence

MEFDCPSLMIFVDFAATNFSGRILRGDSIAVVLNYYISPPYGKGFQRSSISTNEASPPASEALRRRSQHADP
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..58

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G012830.1Lsi10G012830.1mRNA