Lsi10G012350 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G012350
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr10: 16618336 .. 16621002 (+)
RNA-Seq ExpressionLsi10G012350
SyntenyLsi10G012350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTTTTATAATTCGTGTGGCTGTCAGAAGCCGCGTCTCTTTTTCTCTGAAAAGGATTTGATTGGGCTTGGCCCACTTTTATCGGGTCAGTTTCAACTTCAACCCAATTGCTTTTCTTTTTTATACCTTACATCACTTTTTTGTTCTTTGGTATTTAATTTATATATATATATATATATATATTTAGATTAAAAATTACTTTTGGTCTTGACATTGAGTAATTTCAAAAGGGCTAAAATATCTTTTGTCATTTTCAAAAATACCGTGAAATAAGTTTTTAATCCTTCAAAACTAATTTTGATGATTGAAAATTACATTTAAAAATGTAAAATTGAAAATTAAATTGATTTTGAGTGATTAGAGTGTGTTTTTTAGTGATTTTAAAAATGACAGAAGTGATTTTAACGATTTTAAAATCACTCCCAAACATGTTCAAAAAAGCAACAATTTAGTCTATATGTTAATTTATGTACTTTAAACTTTATAATAATCATTGTATTTTAATATGTAACAGTTTAGTTTTTATATTTTCAAATGGTAACAATTTAGTGTCTATCTTTGACCTTTAATCAGTTTTTAGTCTGTAAATTAAAAAATTTCACTAAATTTTAATATCATTATTTTAATAATAAGGACCAAATTATTAAAAATTGAAAAATACAAAAACTAAATTGATATTTATTAAAATTTGGGATAAAAATGATTTTAAAACTATATTTATTACTTATAGGAAAATTATTTAAAATATTTTCAGATTAAAGAATTGATATCCTATATTTAAATTAAAATGTTTTCTTAGTTAAGCTGATTACTTGTATAAATATTCTAACTGTGTTTTGATCCTTTTAAATATTCAAATTGAAAACATTTACTCAACTAATTATGGAGTATAATTCAACCTTTAACTATATTCAAATTGGTTAAAAATAAATAGAAACGACTGTAAACGTGTAACATTTTATTGATATAGTGTATGGTTTACAATTAAGATACATAGGATATAAATATACAAAGAAAGATAATTAAATCTAAATGAGCAAATAAGGAAACAACTAAATGAGCCTAAGATCTTATTAATTTATAACTCACCTAATATATATATGGTAACACCCTCTCTCAAACTCGAGGTGGTAAGTTAGAGATCAACTTGAATTTGTGAAGTAACTGAGTGAAGTGTTCGAACGATAGTGCTTTATTGAATATATCAACGGGTTGCTCTATAGTGGAGATGGGTCGTTGGAGGAGAGTATTCTTAGGAGATGATGATAAACAAAGTGTTCAGATTTTGTGCTGGAACGAGAGACAACAATTTGTTTCTTATTTCGTCAAGAGATGAGAGAATCACCTAAGTAGAAGCAGTAACCTGTGGTAGACCGTCCATCAGTGGGATCACCAGCCCAATTAGCAGCAAAGTAGCCAAATAACACTGCGGACGACTGTGAAGAAAACATAAGTTTATGGTCAAGAGTGTCATTGCTATAGCGTAGAATGTGAAGAACATCAGTAAAGTGGATAGACTGAGGAGCAGCAATAATTATTGAATTTTCACATCTAACGATTTGGTTATGTAGTTTTAAATTTATAATAATTATTGAATTTTAACATGTAACAATTTAGTCCGTATTATTTTCAAATTTGTAACAATTTAGTGTCTATCGTGAAAAATCTCATAATAAATTTTGATTATGTAAGGACTTAGTCCTTATAATTTATAAATATATTTGACCCTTAATCAGTTTATCAATTTATATGTATTAGAAATTTCACTAAATTTTAAATAATAAGGACTAAATCATTACCATTGAAAAGTAAAAGGACTGAATTGATATTTATTAGAGTTTGGGATAAAAATGATTTTTAAACTATATTTTATTACTCACAGGAAAATTATTAAGTATATTTTCAGATTAAAGAATTAATAGCCTACATTTAAATTAAAATGTTTTCTTAGTTAAGCTGGTTACTTGTATTAATATTCTAACTGTATAATCCATTTAAATATTCAAATTGAAAAGATTTACTCAACTAAATATGGAGTATAATTCAACATTGAGTGGAGGTGAAAATCCCAACCTCAACCTCTAGCTATATTCAAATTGGTTATAACTAAATATAAACAAAATATATATATATATATAATTGAAAATTTATTAAATCAATTAAAACATTGTACATATATCTAATTTATGAATTATCTTGAAATTTAAAGATGAATAAATCACTGTTTCATCCGGATCCGAAAATGCCTCTTTTTGTTTCAATAGTGGCGGCGGAGTTCCGGCGGAGTCCGCCAATTGTTGGGGGAGGAAGTGGGGCGGCCACGGCGGCAATCACAAGAGAAGAGAGAAGGGGAGAGAAATTAAAAAAAGAAAAAAAGAAAAAAAAAAGTGAAATGCCACCTCATAACACAAATGATATTAAGTTTTCACAATAATTTTTAATTCCATTCCTACTAATTAAAATAAATTAATATGTGATCGGTACGATAGGCATTCACGATAGCGCATAATAGTCTAATATGTATTCTATTAATTTAAAGTTACGGCATAAGCCATTTAAAAATTATTTGTAAATGAGAGTGTTTGTTTTAAAATTTCAGGAACTTTTAAATCTCAAAGACCAAATGTTCATTTTGTCCGAGAGAGAAATAAGAAAGAAGAAAATAAG

mRNA sequence

TTCTTTTATAATTCGTGTGGCTGTCAGAAGCCGCGTCTCTTTTTCTCTGAAAAGGATTTGATTGGGCTTGGCCCACTTTTATCGGTGGCGGCGGAGTTCCGGCGGAGTCCGCCAATTGTTGGGGGAGGAAGTGGGGCGGCCACGGCGGCAATCACAAGAGAAGAGAGAAGGGGAGAGAAATTAAAAAAAGAAAAAAAGAAAAAAAAAAGAACTTTTAAATCTCAAAGACCAAATGTTCATTTTGTCCGAGAGAGAAATAAGAAAGAAGAAAATAAG

Coding sequence (CDS)

TTCTTTTATAATTCGTGTGGCTGTCAGAAGCCGCGTCTCTTTTTCTCTGAAAAGGATTTGATTGGGCTTGGCCCACTTTTATCGGTGGCGGCGGAGTTCCGGCGGAGTCCGCCAATTGTTGGGGGAGGAAGTGGGGCGGCCACGGCGGCAATCACAAGAGAAGAGAGAAGGGGAGAGAAATTAAAAAAAGAAAAAAAGAAAAAAAAAAGAACTTTTAAATCTCAAAGACCAAATGTTCATTTTGTCCGAGAGAGAAATAAGAAAGAAGAAAATAAG

Protein sequence

FFYNSCGCQKPRLFFSEKDLIGLGPLLSVAAEFRRSPPIVGGGSGAATAAITREERRGEKLKKEKKKKKRTFKSQRPNVHFVRERNKKEENK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G012350.1Lsi10G012350.1mRNA