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Lsi10G011810 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTAATAATATCTAATTGATGAAGAAGATCAAATCTTGCATAATTTTCATATACAAATTTAACCAACGTAACATTATCTCGAAAAGGACCCCAAAAAAATTTGTTCAAGTAGCGTCAGCAGGACAAGTTTGCAGAGTTCAGGGGATTCTGTAGAAACCAATAATCCGAGTTCCATCCAAAGCAGTGATGAGGGCGTTGCAATTGCAGCTTAGAATTGACGCAAATCTTGTAAAGCCATTTTGTCATCTCTGCCCTGCTTCATCTCTGAATCCCTCGCCATTGCTTGTTTTTCAACCTATAAAATACCCCCATCTTCAGAAATTCAAGCCTTCTCGAAGTTCCCGTCGAACCCATTTCTCAACGCCATCGACATCTTTCACCGTAGCTTCTTCCATGGCTGATTCTTCTCTTTCCAGAAGCTCAGAAACAGAGACAAAACCTTTCTCTGTGCTTTTCGTTTGCTTGGGCAACATCTGTAGAAGCCCAGCTGCTGAAGGAGTATTCAGAAACTTGGTGACGAAGAAGGGTTTCGATTCCAAATTCTTTATCGATTCTGCTGGCACCATTGGTTATCATGAGGTAATTGCGTCTATTTTCAATTGGAATTTGCTCAATGGAAGTTCCCTGTGCCATTTTCTTGTCGTAGATACGATTAAAATGTTCCATCATTTTCTCGTCTCTGCAATTAAACAATCGATGTAATTTCTTATGAGCGAGAACTGTTTCTTTATGGTTCTAAGTGATTTTGACTACTTTTCAAGGGTAATGAGGCCGACCCAAGAATGAGGGCAGCCTCTAAACGACGTGGGATAGCAATAACATCCATCTCGAGGCCAATCCTGCCATCTGATTTTGTAAATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGGTAGGAGAATATTATTGGCAAAATCTTTATGCTGTTGCTATGTATTACAACAATCCCACCATCCCAGATTAGCTTGAACTTTGTTAATTGTTCTTTTTCTGGGTCTTAATTGTTTCTATAGAGGATATTTTGGGGGCTTTCGAACGGTGGAGAACAAAGAATGGCCTTCCTCCTGATTCACATAAAAAGGTTAGTACATGATCTTCAATGAGAGGTGTTCATGTTTTTGTATGGTTTTCAATTCTTTTCATCTTGTGATCTTCATAAAGATACTGATGCCATAATGTCAGGTCAAATTAATGTGCTCGTATTGTAAAAAGCACGACGAAACGGAAGTACCGGATCCTTATTACGGTGGCCAACAAGGTTTTGAGAAGGTAATCTAGCATGACTTTACTATGTTTATTGTGGATATGAAGTTTGGGATTGAAAACAAAATAGGAAATTATCTCTTTGATTGGGATTCTGAATTGTTATATGCTTTGAGTAAGCTTCTGGTTCACTCTCTAAGCTAAAATTGCTGGAGAAATGTAGTTGCAATGCACCTGCTATCTGTGATTTATCTCTGTTCAATCATATGATATGACTGCCCTTCTAATTGCTCAAAATGACTCGAAACTCGAAACCTTCTAATACAAATGACCTCTTCTTTAAAACCACCTTTTGGAGGAGCGAAATTATCATTTTACCATTATATAACCAAATCATCAAATATTGTGATTTTGATATCTCTCTCGATAGTCGATACAACTTCATTTCTGTTAGATGACCACTCGTTTTCATACGTACTTTTGTGTTCTTTCCATCCATGTTCTTTCTTGTTTCGTTTTTTAGCAGGGTCGAAAAGAACATAAATATAACCGTATGAAAACGAGTGGTCATTTAACAAAAATGAAGTTGTATCGAGAAAGATATGGTCAAATTTATTGTATTTGATGTTGTTGGTTATATAAGGGCAAAATGATAATTTCACTCCTCAAAGAGGTCAAAAAAACGTGTTTTTGAAAAAGAGGTCATTTGTATAGAATCTTTTGGATTTTGGCTTTTGGGTCATTTTGAGCAATTTTCCGTGAATAACGTGGTTTTTCATTTTCCATGTGGATATTTCAGTGCCTTCCCCCTCTCTCCACATTTAGTAATTAGTGCTTGTATTTCTCATTAAAAGATCAATTCTATGAATGTCAAATTTCAATGCTTGGGTGGTAAAGATTTTCTGAAATTTGTGACTGAGATCAAGTTGATAGTCTAATTTCTTTACCATACCCTTGAAATCTACTTTTATTGCTTGTTCAATGCCACTAAATTTGGTGCTTCTGTTGAAATAATGCAATGTGTCAATTTAGGTCCTGGACTTGCTTGAAGATGCCTGTGAATCGCTGTTGGAAAGCATCTTGGCAGAAAACAAACACATCTCAGATTAATGATTTCTGGCTGTGTACGTTATTCTTGCAAAGTAATGCAAATTATTCAAGTAAAGCAATGGTGATCCATATATGGAATGGACCTTGATTTCTAGTCAGTTTGCTGTTCATTCATTCTCTTCAATTTCGCGCCCTTACCGAAGTCTTTTTACCTTTATCGAGCAAGTTGATTTGAAGATGAATGTATCAGTGCAGCCTTTATATGTCAAGCCAAATGGTATGTATCTGTTGATTATTATTTGTATTTTAATAGTTTTATCTTGCCATTTAAATAAAATTCGAAGTCTTTTCGTACTTTATTTGAATGTTCAATTATCTAACTCCACCTTTTAGCAAGTGTAAATGTAAATTAAACAGTTTTACCCTTTTTTCATCTCCCTTTTTCTTTTCAATTTAGTCTTCAATATAGAAGAGTTCTGTTTC AATTAATAATATCTAATTGATGAAGAAGATCAAATCTTGCATAATTTTCATATACAAATTTAACCAACGTAACATTATCTCGAAAAGGACCCCAAAAAAATTTGTTCAAGTAGCGTCAGCAGGACAAGTTTGCAGAGTTCAGGGGATTCTGTAGAAACCAATAATCCGAGTTCCATCCAAAGCAGTGATGAGGGCGTTGCAATTGCAGCTTAGAATTGACGCAAATCTTGTAAAGCCATTTTGTCATCTCTGCCCTGCTTCATCTCTGAATCCCTCGCCATTGCTTGTTTTTCAACCTATAAAATACCCCCATCTTCAGAAATTCAAGCCTTCTCGAAGTTCCCGTCGAACCCATTTCTCAACGCCATCGACATCTTTCACCGTAGCTTCTTCCATGGCTGATTCTTCTCTTTCCAGAAGCTCAGAAACAGAGACAAAACCTTTCTCTGTGCTTTTCGTTTGCTTGGGCAACATCTGTAGAAGCCCAGCTGCTGAAGGAGTATTCAGAAACTTGGTGACGAAGAAGGGTTTCGATTCCAAATTCTTTATCGATTCTGCTGGCACCATTGGTTATCATGAGGGTAATGAGGCCGACCCAAGAATGAGGGCAGCCTCTAAACGACGTGGGATAGCAATAACATCCATCTCGAGGCCAATCCTGCCATCTGATTTTGTAAATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGAGGATATTTTGGGGGCTTTCGAACGGTGGAGAACAAAGAATGGCCTTCCTCCTGATTCACATAAAAAGGTCAAATTAATGTGCTCGTATTGTAAAAAGCACGACGAAACGGAAGTACCGGATCCTTATTACGGTGGCCAACAAGGTTTTGAGAAGGTCCTGGACTTGCTTGAAGATGCCTGTGAATCGCTGTTGGAAAGCATCTTGGCAGAAAACAAACACATCTCAGATTAATGATTTCTGGCTGTGTACGTTATTCTTGCAAAGTAATGCAAATTATTCAAGTAAAGCAATGGTGATCCATATATGGAATGGACCTTGATTTCTAGTCAGTTTGCTGTTCATTCATTCTCTTCAATTTCGCGCCCTTACCGAAGTCTTTTTACCTTTATCGAGCAAGTTGATTTGAAGATGAATGTATCAGTGCAGCCTTTATATGTCAAGCCAAATGGTATGTATCTGTTGATTATTATTTGTATTTTAATAGTTTTATCTTGCCATTTAAATAAAATTCGAAGTCTTTTCGTACTTTATTTGAATGTTCAATTATCTAACTCCACCTTTTAGCAAGTGTAAATGTAAATTAAACAGTTTTACCCTTTTTTCATCTCCCTTTTTCTTTTCAATTTAGTCTTCAATATAGAAGAGTTCTGTTTC ATGAGGGCGTTGCAATTGCAGCTTAGAATTGACGCAAATCTTGTAAAGCCATTTTGTCATCTCTGCCCTGCTTCATCTCTGAATCCCTCGCCATTGCTTGTTTTTCAACCTATAAAATACCCCCATCTTCAGAAATTCAAGCCTTCTCGAAGTTCCCGTCGAACCCATTTCTCAACGCCATCGACATCTTTCACCGTAGCTTCTTCCATGGCTGATTCTTCTCTTTCCAGAAGCTCAGAAACAGAGACAAAACCTTTCTCTGTGCTTTTCGTTTGCTTGGGCAACATCTGTAGAAGCCCAGCTGCTGAAGGAGTATTCAGAAACTTGGTGACGAAGAAGGGTTTCGATTCCAAATTCTTTATCGATTCTGCTGGCACCATTGGTTATCATGAGGGTAATGAGGCCGACCCAAGAATGAGGGCAGCCTCTAAACGACGTGGGATAGCAATAACATCCATCTCGAGGCCAATCCTGCCATCTGATTTTGTAAATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGAGGATATTTTGGGGGCTTTCGAACGGTGGAGAACAAAGAATGGCCTTCCTCCTGATTCACATAAAAAGGTCAAATTAATGTGCTCGTATTGTAAAAAGCACGACGAAACGGAAGTACCGGATCCTTATTACGGTGGCCAACAAGGTTTTGAGAAGGTCCTGGACTTGCTTGAAGATGCCTGTGAATCGCTGTTGGAAAGCATCTTGGCAGAAAACAAACACATCTCAGATTAA MRALQLQLRIDANLVKPFCHLCPASSLNPSPLLVFQPIKYPHLQKFKPSRSSRRTHFSTPSTSFTVASSMADSSLSRSSETETKPFSVLFVCLGNICRSPAAEGVFRNLVTKKGFDSKFFIDSAGTIGYHEGNEADPRMRAASKRRGIAITSISRPILPSDFVNFDLILAMDKQNREDILGAFERWRTKNGLPPDSHKKVKLMCSYCKKHDETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHISD Homology
BLAST of Lsi10G011810 vs. ExPASy Swiss-Prot
Match: Q55535 (Putative low molecular weight protein-tyrosine-phosphatase slr0328 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0328 PE=1 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 9.7e-37 Identity = 77/157 (49.04%), Postives = 95/157 (60.51%), Query Frame = 0
BLAST of Lsi10G011810 vs. ExPASy Swiss-Prot
Match: P41893 (Low molecular weight phosphotyrosine protein phosphatase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=stp1 PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.1e-27 Identity = 74/163 (45.40%), Postives = 86/163 (52.76%), Query Frame = 0
BLAST of Lsi10G011810 vs. ExPASy Swiss-Prot
Match: O35016 (Low molecular weight protein-tyrosine-phosphatase YfkJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yfkJ PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.6e-26 Identity = 69/164 (42.07%), Postives = 93/164 (56.71%), Query Frame = 0
BLAST of Lsi10G011810 vs. ExPASy Swiss-Prot
Match: Q5ZKG5 (Low molecular weight phosphotyrosine protein phosphatase OS=Gallus gallus OX=9031 GN=ACP1 PE=2 SV=3) HSP 1 Score: 118.6 bits (296), Expect = 1.0e-25 Identity = 64/156 (41.03%), Postives = 88/156 (56.41%), Query Frame = 0
BLAST of Lsi10G011810 vs. ExPASy Swiss-Prot
Match: P24666 (Low molecular weight phosphotyrosine protein phosphatase OS=Homo sapiens OX=9606 GN=ACP1 PE=1 SV=3) HSP 1 Score: 117.1 bits (292), Expect = 2.9e-25 Identity = 67/164 (40.85%), Postives = 86/164 (52.44%), Query Frame = 0
BLAST of Lsi10G011810 vs. ExPASy TrEMBL
Match: A0A0A0KEU9 (Acid phosphatase OS=Cucumis sativus OX=3659 GN=Csa_6G151690 PE=3 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127 Identity = 236/253 (93.28%), Postives = 239/253 (94.47%), Query Frame = 0
BLAST of Lsi10G011810 vs. ExPASy TrEMBL
Match: A0A1S3C8C1 (Acid phosphatase OS=Cucumis melo OX=3656 GN=LOC103497959 PE=3 SV=1) HSP 1 Score: 463.4 bits (1191), Expect = 6.1e-127 Identity = 235/253 (92.89%), Postives = 239/253 (94.47%), Query Frame = 0
BLAST of Lsi10G011810 vs. ExPASy TrEMBL
Match: A0A6J1K8S7 (Acid phosphatase OS=Cucurbita maxima OX=3661 GN=LOC111491165 PE=3 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 7.3e-120 Identity = 219/253 (86.56%), Postives = 230/253 (90.91%), Query Frame = 0
BLAST of Lsi10G011810 vs. ExPASy TrEMBL
Match: A0A6J1H0P1 (Acid phosphatase OS=Cucurbita moschata OX=3662 GN=LOC111459353 PE=3 SV=1) HSP 1 Score: 438.7 bits (1127), Expect = 1.6e-119 Identity = 217/252 (86.11%), Postives = 230/252 (91.27%), Query Frame = 0
BLAST of Lsi10G011810 vs. ExPASy TrEMBL
Match: A0A6J1CGU7 (Acid phosphatase OS=Momordica charantia OX=3673 GN=LOC111011093 PE=3 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 5.4e-115 Identity = 214/254 (84.25%), Postives = 227/254 (89.37%), Query Frame = 0
BLAST of Lsi10G011810 vs. NCBI nr
Match: XP_038900985.1 (putative low molecular weight protein-tyrosine-phosphatase slr0328 [Benincasa hispida]) HSP 1 Score: 471.5 bits (1212), Expect = 4.7e-129 Identity = 237/253 (93.68%), Postives = 238/253 (94.07%), Query Frame = 0
BLAST of Lsi10G011810 vs. NCBI nr
Match: XP_004145794.1 (uncharacterized protein LOC101207515 [Cucumis sativus] >KGN46932.1 hypothetical protein Csa_021073 [Cucumis sativus]) HSP 1 Score: 465.7 bits (1197), Expect = 2.6e-127 Identity = 236/253 (93.28%), Postives = 239/253 (94.47%), Query Frame = 0
BLAST of Lsi10G011810 vs. NCBI nr
Match: XP_008458604.1 (PREDICTED: putative low molecular weight protein-tyrosine-phosphatase slr0328 [Cucumis melo]) HSP 1 Score: 463.4 bits (1191), Expect = 1.3e-126 Identity = 235/253 (92.89%), Postives = 239/253 (94.47%), Query Frame = 0
BLAST of Lsi10G011810 vs. NCBI nr
Match: KAG7035948.1 (hypothetical protein SDJN02_02748 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 444.5 bits (1142), Expect = 6.1e-121 Identity = 221/253 (87.35%), Postives = 232/253 (91.70%), Query Frame = 0
BLAST of Lsi10G011810 vs. NCBI nr
Match: XP_023533395.1 (uncharacterized protein LOC111795296 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 441.8 bits (1135), Expect = 4.0e-120 Identity = 219/253 (86.56%), Postives = 230/253 (90.91%), Query Frame = 0
BLAST of Lsi10G011810 vs. TAIR 10
Match: AT3G44620.1 (protein tyrosine phosphatases;protein tyrosine phosphatases ) HSP 1 Score: 272.3 bits (695), Expect = 3.9e-73 Identity = 134/183 (73.22%), Postives = 154/183 (84.15%), Query Frame = 0
BLAST of Lsi10G011810 vs. TAIR 10
Match: AT3G44620.2 (protein tyrosine phosphatases;protein tyrosine phosphatases ) HSP 1 Score: 259.2 bits (661), Expect = 3.4e-69 Identity = 134/206 (65.05%), Postives = 154/206 (74.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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