Lsi10G011750 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATCAATGTCAAAATAAATGTAAGAACTTTTGCCAAAAAGAAAAAATAAAGAATAAAACCAGAAAAAGTGCGCCAAAAAACCTCAGCCATTTGCCAGTTTCTCACGAACTCAAATCTTCTCTCCGGTACTCAACGGAGCCAGTAGGGCAATCGCCATGGCAGCGATCACTCAACGGAGCTTCTTGAACCTCACCGCCTTCAAATCCTTCACGGCTGAGACCAGAAGGCGCTATGAGAGGAGAAAATTTGGAGCTAACAGCTTTGTCAAGTGCTCTCAGACATTGGAAGGGTCCGCCCAAACTGTTACGGTGTCAAATGGCAAGGATTTCTTAGAAATTTGCCGAGTCCTCAACGGAATGTGGCAAACCAGCGGCGGATGGGGGAGAATCGACCGTGACGCCGCGGTGGAGGCAATGCTCCGATATGCCGACGCCGGACTTTCAACCTTTGATATGGCCGACCACTGTACGTATTGCAGCGGTTTAGGGAACCAAAATTCACATATATTTTGAAATTAAAATTATCTATCAATATTATCATCTTCTTTTGACATTTGTTTTCTTGTGGACCACTCGGTAATCTGTGCGTTTTGATCCATAAACAGCTTTAATGTAGCCACGTAGCCTGTTTGCATGCCACAAATTTTTTAGAACTCCTGGTTTAATTCGATTTTACCCTTTCTCTTTCCTGGTAGATGTAGTTTTGAAGGTGGTCTGTTTTTGGGAAATAGTATTTTCGTTCCTCAGGATAAATGTCTCAGTAGACTGTGGAAGACAGGGATAAATCGGCTTCTGGTGCGTGGACTAGGAAAATATGCAAGTTAAGAACAACTGAAGTGGGGTTCTCTTCTTTAGTTCATTTAGCTTCACACAGATAAAATGGCGAAGTTTTTGGCTAATTCTCCCAGTGGGTTAACTTTTGAATTTGTGAAGCAGAGAAGAGAATGCAAGTCACAGAAATTGAATTCAGGATATTGTCGATGTGTGCTCACTGAAAATAAACGACGGACGGTGGTTAAGAATGGTGAGGATGCATTAGACTTGTGTCGGGTTGTAAATGGAATGTGGCAGACAAGCGGGGGATGGGGTCGAATTGATCGAGATACTGCGGTTGATGCAATGATTAAATATGCTGATTCTGGACTTGACACTTATGATATGGCTGATATATGTATGCAAATCGCCAGTCCTCTTAGTTTTTTGTTGTAATTTTTAGCTATCACATTGAATTGTCGTTGGTTGTGCTGCAATTTCCTTGAAATGAACCAAAATGAATAAGGCCATGTTGTTATGAAGTTGTTAAATTTGGAGTTTCATAAGGATTTTTGTTCATTAAACCCCGTGATTGATACTACTATTGAAGTATGCCTGTTGTTTGAAATGAAGAGATGTTAACCATCCAGTGGGTTTGACTTGATGCCTTAAAATTTGGTGCCCCTCCATTTTCGTAGATGGACCTGCTGAAGATTTATATGGCATCTTCATCAATCGCGTTCGTAGAGAGCGTCCTGAACTCCTAGAGAGTGTAAGAGGGTGAGCTACCAACTCACTTTAGGTAGTTGGGTCAATATTTTTTGAGATCTATGTTAATTGGAAGAGCACGGGCATTTGTAATTAAACTCGAGTACAGAAAAGAAACTTATGATGCCCTTTTCTTTTAATATGCTACATTGAAGGGAGTTTACAGAGTCGAAAATTGGAAATTCATGTTTCTATTCAATATTGAATATGCAGGCTTACAAAATGGGTGCCACCACCGGTGAAAATGACTAGCAGTTATGTCCGGGAGAGCATTAATATCTCACGCAAGAGAATGGATGTGCCTTCTTTGGATATGCTTCAATTTCACTGGTAGAAAACAATTAACATTTTCCCTTATGCACCCACAAGATTTCATGCATATTCGTTTACACGATGTTAATTTGACGTGTGGTTTGTCAATCTCTTTTCAATGCTAATATATGATTCAGAGTCGTGATTTGATAAGTAGCTTAAACCTTAAACCTCGAGTGGCTCTCCTTTTGATCTGGTATAATCTCATCCAATTCAAAGTTGTTCGCAGAGTTTGGCCGTGGAGACGAGATGTCCACTTAGAACCTTCAGGATGATGGCATAAAATATAGTCTGTGTCTTTATGGAACCTATAGTGCACATTTTTCACAATTGATTCTCTTATTCATTCGTCAAGGCAAAAATTAGCAGGGCTGTACTTGTATGCTTCAGCTATCTTAGACTTATGGAATGAAATTTGAAAATTACAAGACATGAATTTTTCTTTAAGGATCAATGATAATCAATGAATTGAATCTATAATTTGACCATAGAACTCATCTAGGCGGTTCCCAGGGTGCAGCTTCAACTTCCAATTCATTTTTTTAATTGTCATACATCTTGGCTTTTGCAATGTAAAACACTGTTTACTTTCTGTCTTCTACTTCTTCTTCTCTCTTTCTCTCTCCCGAAAAGACAAATACATGGTGATGTTTTCTTAGGATCCTCCTTAACAATTGATGTTTTTATATGGTTCTTCTAAGTGTTTCTAAATATTTTTCAACATTGTATTTGGATTAGGTGGGATTATTCAAACCCTGGCTATCTTGATGCTCTCAAACATCTGACCGATTTGAAAGAAGAGGGTAAGTATTATTTATTTGAGCTCTTCGGTTTTAGTTGTCTTGTCACATTTTTTTTATTTAATTAAATTACTTTAGCAAGTGGTGTGTAGGTAAAATCAAGACGGTTGCTTTGACAAATTTTGACACGGAAAGGTTACAAATTATTTTGGAAAATGATATCCCTGTTGTGAGTAATCAGGTAAATGTCAGGTGTATTTCTCTCGTTGTTCATTGCTTTTTTGGTCTGTAATTGACTCATAAGTCATATCTTGAGTGGAAATTCATCAGGTTCAGCACTCTATTGTTGATATGAGGCCTCAACAGAACATGGCAGAGCTTTGCAAGCTCACAGGAGTCAAACTTATAACGTATCAACGTCTCTCTCACTATTTCATTTTACCAATTATCCCAAGTCGTGTTGTCGTCAATGTTACCATTCATATGATCTATAGCTTTTATTTGATTTCAGTACCCACACTGGCAATTTGTTTTCCTTCTTCTTTTGAAGTATGATTTCTAATGCAGATATGGAACTGTAATGGGTGGCTTATTATCAGAAAAATTCCTCGACACCAACTTAACGATTCCTTTTGCTGGCCCTCCATTAAATACACCCTCTCTGCAAAAGTACAAAAGGGTATGAACAAATTCTTTTACGTTAATGATTCTGATCCTGGACCTTCATCAATATGATGGAATTCGGAAAGGAATTACATTCCATAGGGATTCCTATCTTACTTTAGACTAATGTTTAGATGAAAAATATTGACCTTAAACTGAACGGTGATGCTCTTTCTCAATGAAAGAAAGGTGGACGAGTGAGAAATCTTCTTGGATCCGTTGTTGAATCTTACTTTAGTTTGAAATCTTATACACGGCAGATGGTTGATGCATGGGGAGGATGGAGTTTGTTTCAAGTTCTGCTACAGACACTTAAAAGAGTTGCTTCTAAACACGGGGTCTCGATTCCGACTGTTGCGGTTAAATACATACTAGATCAGGTAAAGTGGCCTTTCTTGTAAACTAGATTGCATTCACATAATTCTCAGTAACTTACTGCATTGGATTATACCTTTCTCGATTAAAAATGTGACTGAGTTTCCCTTCTGAGGTTGCAGCCAGCTGTGGCGGGATCGATGATAGGTGTTCGGCTTGGGTTATCAGAGCATTTGCAAGACACAAATGCCATCTTTTCTCTGGCTCTTGACGAGGAGGATATAAACAGCATCCAGGAAGTTTCCAAAAAAGGTAAGAATCTTCTTAGAATTATTGGGGACTGTGGGGATGAATATAGGCGTGCATAACTTAGCAATCTGTCAATGATATGAAATATTTCTTATTATTTGGTCGAGTTGTAAAATTATAATGTTACACAACAATCAATATATTGATACAATATATGGGAAATATCAAATTTATCCCGACCTTTAAAGTTTTGGGACTACGGATTGTAATCATTCCGTGGCATACTTCTTAACAAGGGCAGGAATGTGGATATTCGAAAAGTAGTCTGCTGAATCAATCCATTACTCTAGAATCAAAGTAGAAGGTGGATATTAAAAAAGGAAAAAAGAAAAAGAAAAAAG TATCAATGTCAAAATAAATGTAAGAACTTTTGCCAAAAAGAAAAAATAAAGAATAAAACCAGAAAAAGTGCGCCAAAAAACCTCAGCCATTTGCCAGTTTCTCACGAACTCAAATCTTCTCTCCGGTACTCAACGGAGCCAGTAGGGCAATCGCCATGGCAGCGATCACTCAACGGAGCTTCTTGAACCTCACCGCCTTCAAATCCTTCACGGCTGAGACCAGAAGGCGCTATGAGAGGAGAAAATTTGGAGCTAACAGCTTTGTCAAGTGCTCTCAGACATTGGAAGGGTCCGCCCAAACTGTTACGGTGTCAAATGGCAAGGATTTCTTAGAAATTTGCCGAGTCCTCAACGGAATGTGGCAAACCAGCGGCGGATGGGGGAGAATCGACCGTGACGCCGCGGTGGAGGCAATGCTCCGATATGCCGACGCCGGACTTTCAACCTTTGATATGGCCGACCACTATAAAATGGCGAAGTTTTTGGCTAATTCTCCCAGTGGGTTAACTTTTGAATTTGTGAAGCAGAGAAGAGAATGCAAGTCACAGAAATTGAATTCAGGATATTGTCGATGTGTGCTCACTGAAAATAAACGACGGACGGTGGTTAAGAATGGTGAGGATGCATTAGACTTGTGTCGGGTTGTAAATGGAATGTGGCAGACAAGCGGGGGATGGGGTCGAATTGATCGAGATACTGCGGTTGATGCAATGATTAAATATGCTGATTCTGGACTTGACACTTATGATATGGCTGATATATATGGACCTGCTGAAGATTTATATGGCATCTTCATCAATCGCGTTCGTAGAGAGCGTCCTGAACTCCTAGAGAGTGTAAGAGGGCTTACAAAATGGGTGCCACCACCGGTGAAAATGACTAGCAGTTATGTCCGGGAGAGCATTAATATCTCACGCAAGAGAATGGATAGTCGTGATTTGATAAGTAGCTTAAACCTTAAACCTCGAGTGGCTCTCCTTTTGATCTGGTATAATCTCATCCAATTCAAAGTTGTTCGCAGAGTTTGGCCGTGGAGACGAGATAACTCATCTAGGCGGTTCCCAGGGTGCAGCTTCAACTTCCAATTCATTTTTTTAATTGTCATACATCTTGGCTTTTGCAATGTAAAACACTGTTTACTTTCTGTCTTCTACTTCTTCTTCTCTCTTTCTCTCTCCCGAAAAGACAAATACATGGTGATGTGGGATTATTCAAACCCTGGCTATCTTGATGCTCTCAAACATCTGACCGATTTGAAAGAAGAGGGTAAAATCAAGACGGTTGCTTTGACAAATTTTGACACGGAAAGGTTACAAATTATTTTGGAAAATGATATCCCTGTTGTGAGTAATCAGGTTCAGCACTCTATTGTTGATATGAGGCCTCAACAGAACATGGCAGAGCTTTGCAAGCTCACAGGAGTCAAACTTATAACATATGGAACTGTAATGGGTGGCTTATTATCAGAAAAATTCCTCGACACCAACTTAACGATTCCTTTTGCTGGCCCTCCATTAAATACACCCTCTCTGCAAAAGTACAAAAGGATGGTTGATGCATGGGGAGGATGGAGTTTGTTTCAAGTTCTGCTACAGACACTTAAAAGAGTTGCTTCTAAACACGGGGTCTCGATTCCGACTGTTGCGGTTAAATACATACTAGATCAGCCAGCTGTGGCGGGATCGATGATAGGTGTTCGGCTTGGGTTATCAGAGCATTTGCAAGACACAAATGCCATCTTTTCTCTGGCTCTTGACGAGGAGGATATAAACAGCATCCAGGAAGTTTCCAAAAAAGGTAAGAATCTTCTTAGAATTATTGGGGACTGTGGGGATGAATATAGGCGTGCATAACTTAGCAATCTGTCAATGATATGAAATATTTCTTATTATTTGGTCGAGTTGTAAAATTATAATGTTACACAACAATCAATATATTGATACAATATATGGGAAATATCAAATTTATCCCGACCTTTAAAGTTTTGGGACTACGGATTGTAATCATTCCGTGGCATACTTCTTAACAAGGGCAGGAATGTGGATATTCGAAAAGTAGTCTGCTGAATCAATCCATTACTCTAGAATCAAAGTAGAAGGTGGATATTAAAAAAGGAAAAAAGAAAAAGAAAAAAG ATGGCAGCGATCACTCAACGGAGCTTCTTGAACCTCACCGCCTTCAAATCCTTCACGGCTGAGACCAGAAGGCGCTATGAGAGGAGAAAATTTGGAGCTAACAGCTTTGTCAAGTGCTCTCAGACATTGGAAGGGTCCGCCCAAACTGTTACGGTGTCAAATGGCAAGGATTTCTTAGAAATTTGCCGAGTCCTCAACGGAATGTGGCAAACCAGCGGCGGATGGGGGAGAATCGACCGTGACGCCGCGGTGGAGGCAATGCTCCGATATGCCGACGCCGGACTTTCAACCTTTGATATGGCCGACCACTATAAAATGGCGAAGTTTTTGGCTAATTCTCCCAGTGGGTTAACTTTTGAATTTGTGAAGCAGAGAAGAGAATGCAAGTCACAGAAATTGAATTCAGGATATTGTCGATGTGTGCTCACTGAAAATAAACGACGGACGGTGGTTAAGAATGGTGAGGATGCATTAGACTTGTGTCGGGTTGTAAATGGAATGTGGCAGACAAGCGGGGGATGGGGTCGAATTGATCGAGATACTGCGGTTGATGCAATGATTAAATATGCTGATTCTGGACTTGACACTTATGATATGGCTGATATATATGGACCTGCTGAAGATTTATATGGCATCTTCATCAATCGCGTTCGTAGAGAGCGTCCTGAACTCCTAGAGAGTGTAAGAGGGCTTACAAAATGGGTGCCACCACCGGTGAAAATGACTAGCAGTTATGTCCGGGAGAGCATTAATATCTCACGCAAGAGAATGGATAGTCGTGATTTGATAAGTAGCTTAAACCTTAAACCTCGAGTGGCTCTCCTTTTGATCTGGTATAATCTCATCCAATTCAAAGTTGTTCGCAGAGTTTGGCCGTGGAGACGAGATAACTCATCTAGGCGGTTCCCAGGGTGCAGCTTCAACTTCCAATTCATTTTTTTAATTGTCATACATCTTGGCTTTTGCAATGTAAAACACTGTTTACTTTCTGTCTTCTACTTCTTCTTCTCTCTTTCTCTCTCCCGAAAAGACAAATACATGGTGATGTGGGATTATTCAAACCCTGGCTATCTTGATGCTCTCAAACATCTGACCGATTTGAAAGAAGAGGGTAAAATCAAGACGGTTGCTTTGACAAATTTTGACACGGAAAGGTTACAAATTATTTTGGAAAATGATATCCCTGTTGTGAGTAATCAGGTTCAGCACTCTATTGTTGATATGAGGCCTCAACAGAACATGGCAGAGCTTTGCAAGCTCACAGGAGTCAAACTTATAACATATGGAACTGTAATGGGTGGCTTATTATCAGAAAAATTCCTCGACACCAACTTAACGATTCCTTTTGCTGGCCCTCCATTAAATACACCCTCTCTGCAAAAGTACAAAAGGATGGTTGATGCATGGGGAGGATGGAGTTTGTTTCAAGTTCTGCTACAGACACTTAAAAGAGTTGCTTCTAAACACGGGGTCTCGATTCCGACTGTTGCGGTTAAATACATACTAGATCAGCCAGCTGTGGCGGGATCGATGATAGGTGTTCGGCTTGGGTTATCAGAGCATTTGCAAGACACAAATGCCATCTTTTCTCTGGCTCTTGACGAGGAGGATATAAACAGCATCCAGGAAGTTTCCAAAAAAGGTAAGAATCTTCTTAGAATTATTGGGGACTGTGGGGATGAATATAGGCGTGCATAA MAAITQRSFLNLTAFKSFTAETRRRYERRKFGANSFVKCSQTLEGSAQTVTVSNGKDFLEICRVLNGMWQTSGGWGRIDRDAAVEAMLRYADAGLSTFDMADHYKMAKFLANSPSGLTFEFVKQRRECKSQKLNSGYCRCVLTENKRRTVVKNGEDALDLCRVVNGMWQTSGGWGRIDRDTAVDAMIKYADSGLDTYDMADIYGPAEDLYGIFINRVRRERPELLESVRGLTKWVPPPVKMTSSYVRESINISRKRMDSRDLISSLNLKPRVALLLIWYNLIQFKVVRRVWPWRRDNSSRRFPGCSFNFQFIFLIVIHLGFCNVKHCLLSVFYFFFSLSLSRKDKYMVMWDYSNPGYLDALKHLTDLKEEGKIKTVALTNFDTERLQIILENDIPVVSNQVQHSIVDMRPQQNMAELCKLTGVKLITYGTVMGGLLSEKFLDTNLTIPFAGPPLNTPSLQKYKRMVDAWGGWSLFQVLLQTLKRVASKHGVSIPTVAVKYILDQPAVAGSMIGVRLGLSEHLQDTNAIFSLALDEEDINSIQEVSKKGKNLLRIIGDCGDEYRRA Homology
BLAST of Lsi10G011750 vs. ExPASy Swiss-Prot
Match: Q27YU7 (Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii OX=3055 GN=RSP5 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.4e-14 Identity = 52/173 (30.06%), Postives = 86/173 (49.71%), Query Frame = 0
BLAST of Lsi10G011750 vs. ExPASy Swiss-Prot
Match: P46905 (Uncharacterized oxidoreductase YccK OS=Bacillus subtilis (strain 168) OX=224308 GN=yccK PE=3 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 7.3e-08 Identity = 48/205 (23.41%), Postives = 90/205 (43.90%), Query Frame = 0
BLAST of Lsi10G011750 vs. ExPASy Swiss-Prot
Match: P80874 (Aldo-keto reductase YhdN OS=Bacillus subtilis (strain 168) OX=224308 GN=yhdN PE=1 SV=2) HSP 1 Score: 54.3 bits (129), Expect = 5.2e-06 Identity = 50/205 (24.39%), Postives = 95/205 (46.34%), Query Frame = 0
BLAST of Lsi10G011750 vs. ExPASy Swiss-Prot
Match: O32210 (Glyoxal reductase OS=Bacillus subtilis (strain 168) OX=224308 GN=yvgN PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 1.3e-04 Identity = 46/211 (21.80%), Postives = 86/211 (40.76%), Query Frame = 0
BLAST of Lsi10G011750 vs. ExPASy TrEMBL
Match: A0A5A7SVR5 (Putative oxidoreductase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00480 PE=4 SV=1) HSP 1 Score: 871.7 bits (2251), Expect = 1.7e-249 Identity = 458/570 (80.35%), Postives = 470/570 (82.46%), Query Frame = 0
BLAST of Lsi10G011750 vs. ExPASy TrEMBL
Match: A0A7N2KM23 (Aldo_ket_red domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 691.0 bits (1782), Expect = 4.0e-195 Identity = 377/605 (62.31%), Postives = 421/605 (69.59%), Query Frame = 0
BLAST of Lsi10G011750 vs. ExPASy TrEMBL
Match: A0A1S4E2Q8 (uncharacterized oxidoreductase At1g06690, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497952 PE=4 SV=1) HSP 1 Score: 682.6 bits (1760), Expect = 1.4e-192 Identity = 363/468 (77.56%), Postives = 373/468 (79.70%), Query Frame = 0
BLAST of Lsi10G011750 vs. ExPASy TrEMBL
Match: A0A7J8MJS3 (Aldo_ket_red domain-containing protein OS=Gossypium lobatum OX=34289 GN=Golob_009873 PE=4 SV=1) HSP 1 Score: 682.2 bits (1759), Expect = 1.9e-192 Identity = 369/577 (63.95%), Postives = 411/577 (71.23%), Query Frame = 0
BLAST of Lsi10G011750 vs. ExPASy TrEMBL
Match: A0A6J1J9S8 (uncharacterized oxidoreductase At1g06690, chloroplastic isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111483859 PE=4 SV=1) HSP 1 Score: 678.7 bits (1750), Expect = 2.1e-191 Identity = 359/461 (77.87%), Postives = 371/461 (80.48%), Query Frame = 0
BLAST of Lsi10G011750 vs. NCBI nr
Match: KAA0033397.1 (putative oxidoreductase [Cucumis melo var. makuwa]) HSP 1 Score: 871.7 bits (2251), Expect = 3.5e-249 Identity = 458/570 (80.35%), Postives = 470/570 (82.46%), Query Frame = 0
BLAST of Lsi10G011750 vs. NCBI nr
Match: KAG7010353.1 (putative oxidoreductase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 852.8 bits (2202), Expect = 1.7e-243 Identity = 453/575 (78.78%), Postives = 466/575 (81.04%), Query Frame = 0
BLAST of Lsi10G011750 vs. NCBI nr
Match: XP_038902797.1 (uncharacterized oxidoreductase At1g06690, chloroplastic isoform X2 [Benincasa hispida]) HSP 1 Score: 686.0 bits (1769), Expect = 2.7e-193 Identity = 360/460 (78.26%), Postives = 370/460 (80.43%), Query Frame = 0
BLAST of Lsi10G011750 vs. NCBI nr
Match: XP_016902265.1 (PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 682.6 bits (1760), Expect = 3.0e-192 Identity = 363/468 (77.56%), Postives = 373/468 (79.70%), Query Frame = 0
BLAST of Lsi10G011750 vs. NCBI nr
Match: MBA0564971.1 (hypothetical protein [Gossypium lobatum]) HSP 1 Score: 682.2 bits (1759), Expect = 3.9e-192 Identity = 369/577 (63.95%), Postives = 411/577 (71.23%), Query Frame = 0
BLAST of Lsi10G011750 vs. TAIR 10
Match: AT2G27680.1 (NAD(P)-linked oxidoreductase superfamily protein ) HSP 1 Score: 539.7 bits (1389), Expect = 2.9e-153 Identity = 283/441 (64.17%), Postives = 324/441 (73.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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