Homology
BLAST of Lsi10G011130 vs. ExPASy Swiss-Prot
Match:
Q9M9E2 (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)
HSP 1 Score: 486.5 bits (1251), Expect = 6.0e-136
Identity = 245/689 (35.56%), Postives = 391/689 (56.75%), Query Frame = 0
Query: 130 HSIVGNGTL-DGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGMEVHGVVFKLGFD 189
H + NG L + + N M + V +D+ F +++LC +G +V+ +
Sbjct: 67 HGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSS 126
Query: 190 TDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGDYREARNYYFWM 249
V +GN L ++ G L DA VF +M ER++ SWN ++G + G + EA Y M
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
Query: 250 TLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCNALVDAYGKCGN 309
G+KP++ + +L G+ D + +H + V+ G + + NAL+ Y KCG+
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD 246
Query: 310 VKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKPNSFTVSSILPV 369
VK+ +FD + R+ +SWNA+I+G G C + L +F M P+ T++S++
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 370 LVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIFHNMDRRNIVSW 429
L R G++IH + + G DI + NSL MY +G EA +F M+R++IVSW
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSW 366
Query: 430 NAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLGPGKEIHAMAVR 489
MI+ Y N LP +AI +M + +P+ +T VL ACA LG L G E+H +A++
Sbjct: 367 TTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK 426
Query: 490 LGLTSDLFVSNALTDMYAKCSCLLSARNVF-NTSHKDEVSYNILIIGYSETNDCLESLNL 549
L S + V+N L +MY+KC C+ A ++F N K+ +S+ +I G N C E+L
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIF 486
Query: 550 FSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFVSNSLLDFYTK 609
+M++ +P+ ++ ++ACA + A+ GKEIH LR + F+ N+LLD Y +
Sbjct: 487 LRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVR 546
Query: 610 CGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTVQYDLVSYIAV 669
CGR++ A FN KDV SWN ++ GY G+ + +F+ M V+ D +++I++
Sbjct: 547 CGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISL 606
Query: 670 LSACSHGGLVERGWQYFREMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAELIRRLPIAPD 729
L CS +V +G YF +M + P HY C+VDLLGRAG ++EA + I+++P+ PD
Sbjct: 607 LCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPD 666
Query: 730 ANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNKIREL 789
+WGALL ACRI+ ++LG +A+H+FEL + GYYILL N+YA+ G+W EV K+R +
Sbjct: 667 PAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRM 726
Query: 790 MKSRGAKKNPGCSWVPIYDQVHAFVAEER 817
MK G + GCSWV + +VHAF+++++
Sbjct: 727 MKENGLTVDAGCSWVEVKGKVHAFLSDDK 753
BLAST of Lsi10G011130 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 481.1 bits (1237), Expect = 2.5e-134
Identity = 254/665 (38.20%), Postives = 390/665 (58.65%), Query Frame = 0
Query: 154 LDDHTFPFVLKLCSDTFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRV 213
+D T VL+LC+D+ + G EV + GF D +G+ L ++Y NCG L +A RV
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 214 FDEMPERDVVSWNTVIGLLSVNGDYREARNYYFWMTLRSGIKPNLVSVITLLPISAGLED 273
FDE+ + WN ++ L+ +GD+ + + M + SG++ + + + + L
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSSLRS 211
Query: 274 EEMTRRIHCYTVKVGLDSQVTTCNALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIING 333
++H + +K G + + N+LV Y K V + +VFDE+ ER+ +SWN+IING
Sbjct: 212 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 271
Query: 334 LACKGRCWDALNVFKMMINAGAKPNSFTVSSILPVLVELECFRSGKEIHGFSMRMGTETD 393
G L+VF M+ +G + + T+ S+ + G+ +H ++ +
Sbjct: 272 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 331
Query: 394 IFIANSLIDMYAKSGRSTEASSIFHNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQE 453
N+L+DMY+K G A ++F M R++VS+ +MIA YA GL EA++ M+E
Sbjct: 332 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 391
Query: 454 TGERPNAVTFTNVLPACARLGFLGPGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLS 513
G P+ T T VL CAR L GK +H L D+FVSNAL DMYAKC +
Sbjct: 392 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 451
Query: 514 ARNVFNTSH-KDEVSYNILIIGYSETNDCLESLNLFSEMRLLGKK---PDVVSFVGVISA 573
A VF+ KD +S+N +I GYS+ E+L+LF+ LL +K PD + V+ A
Sbjct: 452 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN--LLLEEKRFSPDERTVACVLPA 511
Query: 574 CANLAAVKQGKEIHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACKVFNQILFKDVASW 633
CA+L+A +G+EIHG +RN +S V+NSL+D Y KCG + +A +F+ I KD+ SW
Sbjct: 512 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 571
Query: 634 NTMILGYGMIGELETAISMFEAMRGDTVQYDLVSYIAVLSACSHGGLVERGWQYFREMLA 693
MI GYGM G + AI++F MR ++ D +S++++L ACSH GLV+ GW++F M
Sbjct: 572 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 631
Query: 694 Q-HLEPTEMHYTCMVDLLGRAGFVEEAAELIRRLPIAPDANIWGALLGACRIYGNVELGS 753
+ +EPT HY C+VD+L R G + +A I +PI PDA IWGALL CRI+ +V+L
Sbjct: 632 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 691
Query: 754 RAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNKIRELMKSRGAKKNPGCSWVPIYDQV 813
+ AE +FEL+P++ GYY+L++N+YAE +W++V ++R+ + RG +KNPGCSW+ I +V
Sbjct: 692 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 751
BLAST of Lsi10G011130 vs. ExPASy Swiss-Prot
Match:
Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)
HSP 1 Score: 469.5 bits (1207), Expect = 7.6e-131
Identity = 267/753 (35.46%), Postives = 421/753 (55.91%), Query Frame = 0
Query: 62 SNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQNCRTAF 121
S++ +L + +++HAL + G L S LI Y+ F+ P S S+F + V + +
Sbjct: 15 SSSSNLNELRRIHALVISLG-LDSSDFFSGKLIDKYSHFREPASSLSVFRR-VSPAKNVY 74
Query: 122 LWNTLIRAHSIVGNGTL-DGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGMEVHG 181
LWN++IRA S NG + E Y ++ V D +TFP V+K C+ FD G V+
Sbjct: 75 LWNSIIRAFS--KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYE 134
Query: 182 VVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGDYRE 241
+ +GF++D++VGN L+ +Y G L AR+VFDEMP RD+VSWN++I S +G Y E
Sbjct: 135 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 194
Query: 242 ARNYYFWMTLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCNALV 301
A Y + S I P+ +V ++LP L + + +H + +K G++S V N LV
Sbjct: 195 ALEIYHELK-NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 254
Query: 302 DAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKPNSF 361
Y K +VFDE+ R+ VS+N +I G +++ +F ++ KP+
Sbjct: 255 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLL 314
Query: 362 TVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIFHNM 421
TVSS+L L K I+ + ++ G + + N LID+YAK G A +F++M
Sbjct: 315 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 374
Query: 422 DRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLGPGK 481
+ ++ VSWN++I+ Y +G +EA++ +M E+ + +T+ ++ RL L GK
Sbjct: 375 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 434
Query: 482 EIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNT-SHKDEVSYNILIIGYSETN 541
+H+ ++ G+ DL VSNAL DMYAKC + + +F++ D V++N +I
Sbjct: 435 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFG 494
Query: 542 DCLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFVSN 601
D L + ++MR PD+ +F+ + CA+LAA + GKEIH LR S L + N
Sbjct: 495 DFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 554
Query: 602 SLLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTVQY 661
+L++ Y+KCG ++ + +VF ++ +DV +W MI YGM GE E A+ F M +
Sbjct: 555 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 614
Query: 662 DLVSYIAVLSACSHGGLVERGWQYFREMLAQH-LEPTEMHYTCMVDLLGRAGFVEEAAEL 721
D V +IA++ ACSH GLV+ G F +M + ++P HY C+VDLL R+ + +A E
Sbjct: 615 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 674
Query: 722 IRRLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGRW 781
I+ +PI PDA+IW ++L ACR G++E R + + EL P GY IL SN YA +W
Sbjct: 675 IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKW 734
Query: 782 DEVNKIRELMKSRGAKKNPGCSWVPIYDQVHAF 812
D+V+ IR+ +K + KNPG SW+ + VH F
Sbjct: 735 DKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVF 761
BLAST of Lsi10G011130 vs. ExPASy Swiss-Prot
Match:
Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)
HSP 1 Score: 468.8 bits (1205), Expect = 1.3e-130
Identity = 262/776 (33.76%), Postives = 428/776 (55.15%), Query Frame = 0
Query: 57 LLTLCSNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQN 116
LL + + +++H L + L LC +I YA P+ S F
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDD--SRFVFDALR 149
Query: 117 CRTAFLWNTLIRAHSIVGNGTLDG-FETYNRMVRVGVQLDDH-TFPFVLKLCSDTFDICK 176
+ F WN +I ++S N D ET+ M+ L DH T+P V+K C+ D+
Sbjct: 150 SKNLFQWNAVISSYS--RNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 209
Query: 177 GMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSV 236
G+ VHG+V K G DV+VGN L+ YG GF+ DA ++FD MPER++VSWN++I + S
Sbjct: 210 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 269
Query: 237 NGDYREARNYYFWMTLRSG---IKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDS 296
NG E+ M +G P++ +++T+LP+ A + + + +H + VK+ LD
Sbjct: 270 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 329
Query: 297 QVTTCNALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMI 356
++ NAL+D Y KCG + +F +N VSWN ++ G + +G +V + M+
Sbjct: 330 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 389
Query: 357 NAG--AKPNSFTVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGR 416
G K + T+ + +PV S KE+H +S++ + +AN+ + YAK G
Sbjct: 390 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 449
Query: 417 STEASSIFHNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPA 476
+ A +FH + + + SWNA+I +A + P ++ + M+ +G P++ T ++L A
Sbjct: 450 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 509
Query: 477 CARLGFLGPGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNT-SHKDEVSY 536
C++L L GKE+H +R L DLFV ++ +Y C L + + +F+ K VS+
Sbjct: 510 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 569
Query: 537 NILIIGYSETNDCLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALR 596
N +I GY + +L +F +M L G + +S + V AC+ L +++ G+E H AL+
Sbjct: 570 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 629
Query: 597 NHLYSHLFVSNSLLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISM 656
+ L F++ SL+D Y K G I + KVFN + K ASWN MI+GYG+ G + AI +
Sbjct: 630 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKL 689
Query: 657 FEAMRGDTVQYDLVSYIAVLSACSHGGLVERGWQYFREMLAQH-LEPTEMHYTCMVDLLG 716
FE M+ D ++++ VL+AC+H GL+ G +Y +M + L+P HY C++D+LG
Sbjct: 690 FEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLG 749
Query: 717 RAGFVEEAAELI-RRLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYI 776
RAG +++A ++ + D IW +LL +CRI+ N+E+G + A LFEL+P+ Y+
Sbjct: 750 RAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYV 809
Query: 777 LLSNMYAETGRWDEVNKIRELMKSRGAKKNPGCSWVPIYDQVHAFVAEER-AEGFE 822
LLSN+YA G+W++V K+R+ M +K+ GCSW+ + +V +FV ER +GFE
Sbjct: 810 LLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFE 861
BLAST of Lsi10G011130 vs. ExPASy Swiss-Prot
Match:
Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 456.4 bits (1173), Expect = 6.7e-127
Identity = 256/724 (35.36%), Postives = 414/724 (57.18%), Query Frame = 0
Query: 114 VQNCRTAFLWNTLIRAHSIVGNGTLDGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDIC 173
+ R+ W L+R+ + N + TY M+ +G++ D++ FP +LK +D D+
Sbjct: 56 ISQSRSPEWWIDLLRS-KVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDME 115
Query: 174 KGMEVHGVVFKLGFDTD-VYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLL 233
G ++H V+K G+ D V V NTL+ LY CG +VFD + ER+ VSWN++I L
Sbjct: 116 LGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSL 175
Query: 234 SVNGDYREARNYYFWMTLRSGIKPN---LVSVITL---LPISAGLEDEEMTRRIHCYTVK 293
+ A + M L ++P+ LVSV+T LP+ GL M +++H Y ++
Sbjct: 176 CSFEKWEMALEAFRCM-LDENVEPSSFTLVSVVTACSNLPMPEGL---MMGKQVHAYGLR 235
Query: 294 VG-LDSQVTTCNALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALN 353
G L+S + N LV YGK G + + + R+ V+WN +++ L + +AL
Sbjct: 236 KGELNSFI--INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE 295
Query: 354 VFKMMINAGAKPNSFTVSSILPVLVELECFRSGKEIHGFSMRMGT-ETDIFIANSLIDMY 413
+ M+ G +P+ FT+SS+LP LE R+GKE+H ++++ G+ + + F+ ++L+DMY
Sbjct: 296 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 355
Query: 414 AKSGRSTEASSIFHNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQET-GERPNAVTF 473
+ +F M R I WNAMIA Y+ N EA+ I M+E+ G N+ T
Sbjct: 356 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 415
Query: 474 TNVLPACARLGFLGPGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVF-NTSH 533
V+PAC R G + IH V+ GL D FV N L DMY++ + A +F
Sbjct: 416 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED 475
Query: 534 KDEVSYNILIIGYSETNDCLESLNLFSEMRLLGK-----------KPDVVSFVGVISACA 593
+D V++N +I GY + ++L L +M+ L + KP+ ++ + ++ +CA
Sbjct: 476 RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 535
Query: 594 NLAAVKQGKEIHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACKVFNQILFKDVASWNT 653
L+A+ +GKEIH A++N+L + + V ++L+D Y KCG + ++ KVF+QI K+V +WN
Sbjct: 536 ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNV 595
Query: 654 MILGYGMIGELETAISMFEAMRGDTVQYDLVSYIAVLSACSHGGLVERGWQYFREMLAQH 713
+I+ YGM G + AI + M V+ + V++I+V +ACSH G+V+ G + F M +
Sbjct: 596 IIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDY 655
Query: 714 -LEPTEMHYTCMVDLLGRAGFVEEAAELIRRLP-IAPDANIWGALLGACRIYGNVELGSR 773
+EP+ HY C+VDLLGRAG ++EA +L+ +P A W +LLGA RI+ N+E+G
Sbjct: 656 GVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEI 715
Query: 774 AAEHLFELKPQHCGYYILLSNMYAETGRWDEVNKIRELMKSRGAKKNPGCSWVPIYDQVH 814
AA++L +L+P +Y+LL+N+Y+ G WD+ ++R MK +G +K PGCSW+ D+VH
Sbjct: 716 AAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVH 772
BLAST of Lsi10G011130 vs. ExPASy TrEMBL
Match:
A0A5A7V0P3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001270 PE=4 SV=1)
HSP 1 Score: 1550.0 bits (4012), Expect = 0.0e+00
Identity = 754/833 (90.52%), Postives = 791/833 (94.96%), Query Frame = 0
Query: 1 MLQFCIRSSIVS--PFPFSSQINRFQHRNFLQPILVSTLQSPL-PSSPSTDPNSSIHVNL 60
ML+ CIRSSIVS PFPF SQI RF++RNF QPILVS LQSPL P S STD NS IH+NL
Sbjct: 1 MLELCIRSSIVSPLPFPFPSQITRFRYRNFHQPILVSALQSPLSPPSSSTDSNSFIHINL 60
Query: 61 LTLCSNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQNC 120
LTLCS QSL QTKQ+HAL +LNG LPRSVSLCASLILNYAKFQHPESFCSLF+QT QNC
Sbjct: 61 LTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPESFCSLFNQTFQNC 120
Query: 121 RTAFLWNTLIRAHSIVGNGTLDGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGME 180
RTAFLWNTLIRAHSI NGTLDGFETYNRMVR+GVQLDDHTFPFVLKLCSD+FDICKGME
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTLDGFETYNRMVRLGVQLDDHTFPFVLKLCSDSFDICKGME 180
Query: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD
Sbjct: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
Query: 241 YREARNYYFWMTLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCN 300
Y+EARNYYFWM LRSGIKPNLVSVI+LLPISA LEDEEMTRRIHC++VKVGLDSQVTTCN
Sbjct: 241 YKEARNYYFWMILRSGIKPNLVSVISLLPISAALEDEEMTRRIHCFSVKVGLDSQVTTCN 300
Query: 301 ALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKP 360
ALVDAYGKCG+VKALWQVF+E+VERNEVSWN+IINGLACKGRCWDAL F+MMI+AGAKP
Sbjct: 301 ALVDAYGKCGSVKALWQVFNEMVERNEVSWNSIINGLACKGRCWDALKAFRMMIDAGAKP 360
Query: 361 NSFTVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIF 420
NS T+SSILPVLVELECF++GKEIHGFSMR+GTETDIFIANSLIDMYAKSGRSTEAS+IF
Sbjct: 361 NSVTISSILPVLVELECFKAGKEIHGFSMRIGTETDIFIANSLIDMYAKSGRSTEASTIF 420
Query: 421 HNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLG 480
HN+DRRN+V+WNAMIANYALN LPLEAIRFVI MQETGE PNAVTFTNVLPACARLGFLG
Sbjct: 421 HNLDRRNVVTWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLG 480
Query: 481 PGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNTSHKDEVSYNILIIGYSE 540
PGKEIHAM VR+GLTSDLFVSN+L DMYAKC L SARN+FNTSHKDEVSYNILIIGYSE
Sbjct: 481 PGKEIHAMVVRIGLTSDLFVSNSLIDMYAKCGSLCSARNLFNTSHKDEVSYNILIIGYSE 540
Query: 541 TNDCLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFV 600
TNDC +SLNLFSEMRLLGKKPDVVSFVGVISACANLAA+KQGKEIHGVALRNHLYSHLFV
Sbjct: 541 TNDCFQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEIHGVALRNHLYSHLFV 600
Query: 601 SNSLLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTV 660
SNSLLDFYTKCGRIDIAC+VFNQILFKDVASWNTMILGYGMIGELETAISMFEAMR DTV
Sbjct: 601 SNSLLDFYTKCGRIDIACRVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTV 660
Query: 661 QYDLVSYIAVLSACSHGGLVERGWQYFREMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
QYDLVSYIAVLSACSHGGLVERGWQYF EMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE
Sbjct: 661 QYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
Query: 721 LIRRLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGR 780
LI+RLPIAPDANIWGALLGACRIYGNVELG RAAEHLFELKPQHCGYYILLSN+YAETGR
Sbjct: 721 LIQRLPIAPDANIWGALLGACRIYGNVELGCRAAEHLFELKPQHCGYYILLSNIYAETGR 780
Query: 781 WDEVNKIRELMKSRGAKKNPGCSWVPIYDQVHAFVAEERAEGFESGGWLAESV 831
WDE N+IRELMKSRGAKKNPGCSWV I DQVH+FVAEER EGFESG WLAESV
Sbjct: 781 WDEANRIRELMKSRGAKKNPGCSWVQICDQVHSFVAEERVEGFESGDWLAESV 833
BLAST of Lsi10G011130 vs. ExPASy TrEMBL
Match:
A0A5D3B8B5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00510 PE=4 SV=1)
HSP 1 Score: 1545.4 bits (4000), Expect = 0.0e+00
Identity = 752/833 (90.28%), Postives = 789/833 (94.72%), Query Frame = 0
Query: 1 MLQFCIRSSIVS--PFPFSSQINRFQHRNFLQPILVSTLQSPL-PSSPSTDPNSSIHVNL 60
ML+ CIRSSIVS P PF SQI RF++RNF QPILVS LQSPL P S STD NS IH+NL
Sbjct: 1 MLELCIRSSIVSPLPIPFPSQITRFRYRNFHQPILVSALQSPLSPPSSSTDSNSYIHINL 60
Query: 61 LTLCSNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQNC 120
LTLCS QSL QTKQ+HAL +LNG LPRSVSLCASLILNYAKFQHPESFCSLF+QT QNC
Sbjct: 61 LTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPESFCSLFNQTFQNC 120
Query: 121 RTAFLWNTLIRAHSIVGNGTLDGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGME 180
RTAFLWNTLIRAHSI NGTLDGFETYNRMVR+GVQLDDHTFPFVLKLCSD+FDICKGME
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTLDGFETYNRMVRLGVQLDDHTFPFVLKLCSDSFDICKGME 180
Query: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
VHGVVFKLGFDTDVYV NTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD
Sbjct: 181 VHGVVFKLGFDTDVYVSNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
Query: 241 YREARNYYFWMTLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCN 300
Y+EARNYYFWM LRSGIKPNLVSVI+LLPISA LEDEEMTRRIHC++VKVGLDSQVTTCN
Sbjct: 241 YKEARNYYFWMILRSGIKPNLVSVISLLPISAALEDEEMTRRIHCFSVKVGLDSQVTTCN 300
Query: 301 ALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKP 360
ALVDAYGKCG+VKALWQVF+E+VERNEVSWN+IINGLACKGRCWDAL F+MMI+AGAKP
Sbjct: 301 ALVDAYGKCGSVKALWQVFNEMVERNEVSWNSIINGLACKGRCWDALKAFRMMIDAGAKP 360
Query: 361 NSFTVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIF 420
NS T+SSILPVLVELECF++GKEIHGFSMR+GTETDIFIANSLIDMYAKSGRSTEAS+IF
Sbjct: 361 NSVTISSILPVLVELECFKAGKEIHGFSMRIGTETDIFIANSLIDMYAKSGRSTEASTIF 420
Query: 421 HNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLG 480
HN+DRRN+V+WNAMIANYALN LPLEAIRFVI MQETGE PNAVTFTNVLPACARLGFLG
Sbjct: 421 HNLDRRNVVTWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLG 480
Query: 481 PGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNTSHKDEVSYNILIIGYSE 540
PGKEIHAM VR+GLTSDLFVSN+L DMYAKC L SARN+FNTSHKDEVSYNILIIGYSE
Sbjct: 481 PGKEIHAMVVRIGLTSDLFVSNSLIDMYAKCGSLCSARNLFNTSHKDEVSYNILIIGYSE 540
Query: 541 TNDCLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFV 600
TNDC +SLNLFSEMRLLGKKPDVVSFVGVISACANLAA+KQGKEIHGVALRNHLYSHLFV
Sbjct: 541 TNDCFQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEIHGVALRNHLYSHLFV 600
Query: 601 SNSLLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTV 660
SNSLLDFYTKCGRIDIAC+VFNQILFKDVASWNTMILGYGMIGELETAISMFEAMR DTV
Sbjct: 601 SNSLLDFYTKCGRIDIACRVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTV 660
Query: 661 QYDLVSYIAVLSACSHGGLVERGWQYFREMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
QYDLVSYIAVLSACSHGGLVERGWQYF EMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE
Sbjct: 661 QYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
Query: 721 LIRRLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGR 780
LI+RLPIAPDANIWGALLGACRIYGNVELG RAAEHLFELKPQHCGYYILLSN+YAETGR
Sbjct: 721 LIQRLPIAPDANIWGALLGACRIYGNVELGCRAAEHLFELKPQHCGYYILLSNIYAETGR 780
Query: 781 WDEVNKIRELMKSRGAKKNPGCSWVPIYDQVHAFVAEERAEGFESGGWLAESV 831
WDE N+IRELMKSRGAKKNPGCSWV I DQVH+FVAEER EGFESG WLAESV
Sbjct: 781 WDEANRIRELMKSRGAKKNPGCSWVQICDQVHSFVAEERVEGFESGDWLAESV 833
BLAST of Lsi10G011130 vs. ExPASy TrEMBL
Match:
A0A0A0KEH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G428560 PE=4 SV=1)
HSP 1 Score: 1544.6 bits (3998), Expect = 0.0e+00
Identity = 753/833 (90.40%), Postives = 788/833 (94.60%), Query Frame = 0
Query: 1 MLQFCIRSSIVS--PFPFSSQINRFQHRNFLQPILVSTLQSPL-PSSPSTDPNSSIHVNL 60
ML+FCIRSSIVS PFPF SQI RFQ+RNFLQPILVS LQSPL P S STDPNS IH+NL
Sbjct: 1 MLEFCIRSSIVSPLPFPFPSQIIRFQYRNFLQPILVSALQSPLSPPSSSTDPNSYIHINL 60
Query: 61 LTLCSNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQNC 120
LTLCS QSL QTKQ+HAL +LNG LPRSVSLCASLILNYAKFQHP SFCSLF+QT QNC
Sbjct: 61 LTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNC 120
Query: 121 RTAFLWNTLIRAHSIVGNGTLDGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGME 180
RTAFLWNTLIRAHSI NGT DGFETYNRMVR GVQLDDHTFPFVLKLCSD+FDICKGME
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGME 180
Query: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARR+FDEMPERDVVSWNT+IGLLSVNGD
Sbjct: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGD 240
Query: 241 YREARNYYFWMTLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCN 300
Y EARNYYFWM LRS IKPNLVSVI+LLPISA LEDEEMTRRIHCY+VKVGLDSQVTTCN
Sbjct: 241 YTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCN 300
Query: 301 ALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKP 360
ALVDAYGKCG+VKALWQVF+E VE+NEVSWN+IINGLACKGRCWDALN F+MMI+AGA+P
Sbjct: 301 ALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQP 360
Query: 361 NSFTVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIF 420
NS T+SSILPVLVELECF++GKEIHGFSMRMGTETDIFIANSLIDMYAKSG STEAS+IF
Sbjct: 361 NSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIF 420
Query: 421 HNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLG 480
HN+DRRNIVSWNAMIANYALN LPLEAIRFVI MQETGE PNAVTFTNVLPACARLGFLG
Sbjct: 421 HNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLG 480
Query: 481 PGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNTSHKDEVSYNILIIGYSE 540
PGKEIHAM VR+GLTSDLFVSN+L DMYAKC CL SARNVFNTS KDEVSYNILIIGYSE
Sbjct: 481 PGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEVSYNILIIGYSE 540
Query: 541 TNDCLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFV 600
T+DCL+SLNLFSEMRLLGKKPDVVSFVGVISACANLAA+KQGKE+HGVALRNHLYSHLFV
Sbjct: 541 TDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFV 600
Query: 601 SNSLLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTV 660
SNSLLDFYTKCGRIDIAC++FNQILFKDVASWNTMILGYGMIGELETAISMFEAMR DTV
Sbjct: 601 SNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTV 660
Query: 661 QYDLVSYIAVLSACSHGGLVERGWQYFREMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
QYDLVSYIAVLSACSHGGLVERGWQYF EMLAQ LEPTEMHYTCMVDLLGRAGFVEEAA+
Sbjct: 661 QYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAK 720
Query: 721 LIRRLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGR 780
LI++LPIAPDANIWGALLGACRIYGNVELG RAAEHLFELKPQHCGYYILLSN+YAETGR
Sbjct: 721 LIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGR 780
Query: 781 WDEVNKIRELMKSRGAKKNPGCSWVPIYDQVHAFVAEERAEGFESGGWLAESV 831
WDE NKIRELMKSRGAKKNPGCSWV IYDQVHAFVAEER EGFE G WLAESV
Sbjct: 781 WDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEERVEGFELGDWLAESV 833
BLAST of Lsi10G011130 vs. ExPASy TrEMBL
Match:
A0A1S3BND4 (pentatricopeptide repeat-containing protein At4g14170-like OS=Cucumis melo OX=3656 GN=LOC103491451 PE=4 SV=1)
HSP 1 Score: 1543.9 bits (3996), Expect = 0.0e+00
Identity = 751/833 (90.16%), Postives = 788/833 (94.60%), Query Frame = 0
Query: 1 MLQFCIRSSIVS--PFPFSSQINRFQHRNFLQPILVSTLQSPL-PSSPSTDPNSSIHVNL 60
ML+ CIRSSIVS P PF SQI RF++RNF QPILVS LQSPL P S STD NS IH+NL
Sbjct: 1 MLELCIRSSIVSPLPIPFPSQITRFRYRNFHQPILVSALQSPLSPPSSSTDSNSYIHINL 60
Query: 61 LTLCSNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQNC 120
LTLCS QSL QTKQ+HAL +LNG LPRSVSLCASLILNYAKFQHPESFCSLF+QT QNC
Sbjct: 61 LTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPESFCSLFNQTFQNC 120
Query: 121 RTAFLWNTLIRAHSIVGNGTLDGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGME 180
RTAFLWNTLIRAHSI NGTLDGFETYNRMVR+GVQLDDHTFPFVLKLCSD+FDICKGME
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTLDGFETYNRMVRLGVQLDDHTFPFVLKLCSDSFDICKGME 180
Query: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
VHGVVFKLGFDTDVYV NTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD
Sbjct: 181 VHGVVFKLGFDTDVYVSNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
Query: 241 YREARNYYFWMTLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCN 300
Y+EARNYYFWM LRSGIKPNLVSVI+LLPISA LEDEEMTRRIHC++VKVGLDSQVTTCN
Sbjct: 241 YKEARNYYFWMILRSGIKPNLVSVISLLPISAALEDEEMTRRIHCFSVKVGLDSQVTTCN 300
Query: 301 ALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKP 360
ALVDAYGKCG+VKALWQVF+E+VERNEVSWN+IINGLACKGRCWD L F+MMI+AGAKP
Sbjct: 301 ALVDAYGKCGSVKALWQVFNEMVERNEVSWNSIINGLACKGRCWDTLKAFRMMIDAGAKP 360
Query: 361 NSFTVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIF 420
NS T+SSILPVLVELECF++GKEIHGFSMR+GTETDIFIANSLIDMYAKSGRSTEAS+IF
Sbjct: 361 NSVTISSILPVLVELECFKAGKEIHGFSMRIGTETDIFIANSLIDMYAKSGRSTEASTIF 420
Query: 421 HNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLG 480
HN+DRRN+V+WNAMIANYALN LPLEAIRFVI MQETGE PNAVTFTNVLPACARLGFLG
Sbjct: 421 HNLDRRNVVTWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLG 480
Query: 481 PGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNTSHKDEVSYNILIIGYSE 540
PGKEIHAM VR+GLTSDLFVSN+L DMYAKC L SARN+FNTSHKDEVSYNILIIGYSE
Sbjct: 481 PGKEIHAMVVRIGLTSDLFVSNSLIDMYAKCGSLCSARNLFNTSHKDEVSYNILIIGYSE 540
Query: 541 TNDCLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFV 600
TNDC +SLNLFSEMRLLGKKPDVVSFVGVISACANLAA+KQGKEIHGVALRNHLYSHLFV
Sbjct: 541 TNDCFQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEIHGVALRNHLYSHLFV 600
Query: 601 SNSLLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTV 660
SNSLLDFYTKCGRIDIAC+VFNQILFKDVASWNTMILGYGMIGELETAISMFEAMR DTV
Sbjct: 601 SNSLLDFYTKCGRIDIACRVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTV 660
Query: 661 QYDLVSYIAVLSACSHGGLVERGWQYFREMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
QYDLVSYIAVLSACSHGGLVERGWQYF EMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE
Sbjct: 661 QYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
Query: 721 LIRRLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGR 780
LI+RLPIAPDANIWGALLGACRIYGNVELG RAAEHLFELKPQHCGYYILLSN+YAETGR
Sbjct: 721 LIQRLPIAPDANIWGALLGACRIYGNVELGCRAAEHLFELKPQHCGYYILLSNIYAETGR 780
Query: 781 WDEVNKIRELMKSRGAKKNPGCSWVPIYDQVHAFVAEERAEGFESGGWLAESV 831
WDE N+IRELMKSRGAKKNPGCSWV I DQVH+FVAEER EGFESG WLAESV
Sbjct: 781 WDEANRIRELMKSRGAKKNPGCSWVQICDQVHSFVAEERVEGFESGDWLAESV 833
BLAST of Lsi10G011130 vs. ExPASy TrEMBL
Match:
A0A6J1DHT8 (pentatricopeptide repeat-containing protein At4g14170-like OS=Momordica charantia OX=3673 GN=LOC111020621 PE=4 SV=1)
HSP 1 Score: 1479.5 bits (3829), Expect = 0.0e+00
Identity = 719/832 (86.42%), Postives = 768/832 (92.31%), Query Frame = 0
Query: 1 MLQFCIRSS---IVSPFPFSSQINRFQHRNFLQPILVSTLQSPLPSSPSTDPNSSIHVNL 60
ML C RS+ SPF FS Q RFQ+R+FL P+L S SPLP PST+P SS+HV+L
Sbjct: 1 MLHSCARSTGLHFASPFQFSFQTTRFQYRSFLHPVLGSASSSPLP-LPSTEPVSSVHVDL 60
Query: 61 LTLCSNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQNC 120
LTLCSNAQSL QTKQLHALCLLNGLLP SVSLCASLIL+YA F+ PESF LFHQTVQNC
Sbjct: 61 LTLCSNAQSLRQTKQLHALCLLNGLLPHSVSLCASLILDYATFRDPESFRILFHQTVQNC 120
Query: 121 RTAFLWNTLIRAHSIVGNGTLDGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGME 180
RTAFLWNTLIRAHSI GNG +DG +TYNRMVR GVQLDDHTFPFVLKLCSD+ DICKGME
Sbjct: 121 RTAFLWNTLIRAHSIAGNGMIDGLQTYNRMVRSGVQLDDHTFPFVLKLCSDSLDICKGME 180
Query: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
VHGVV KLGFD+DVYVGNTLLMLYGNCG ++DARRVFDEMPERDVVSWNT++GLLSVNGD
Sbjct: 181 VHGVVSKLGFDSDVYVGNTLLMLYGNCGVVSDARRVFDEMPERDVVSWNTILGLLSVNGD 240
Query: 241 YREARNYYFWMTLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCN 300
YREARNYYFWMTLRSGI+PN+VSV+ LLPISA LEDEEMTRRIHCYT+K GLDSQVTTCN
Sbjct: 241 YREARNYYFWMTLRSGIQPNVVSVVILLPISAALEDEEMTRRIHCYTMKAGLDSQVTTCN 300
Query: 301 ALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKP 360
ALVDAYGKCGNVKA WQVFDE+VERNEVSWNAIINGLACKG DAL+VF+MMI+A KP
Sbjct: 301 ALVDAYGKCGNVKASWQVFDEMVERNEVSWNAIINGLACKGHFCDALDVFRMMIDAEVKP 360
Query: 361 NSFTVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIF 420
NS T+SSILPVLVELE F++GKEIHGFSMRMGTETDIFIANSLIDMYAKSG STEAS IF
Sbjct: 361 NSVTISSILPVLVELEYFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASCIF 420
Query: 421 HNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLG 480
HNMDRRN+VSWNAMIANYALNGL LEAIR VILMQETGE PNAVTFTNVLPACARLGFLG
Sbjct: 421 HNMDRRNVVSWNAMIANYALNGLALEAIRQVILMQETGENPNAVTFTNVLPACARLGFLG 480
Query: 481 PGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNTSHKDEVSYNILIIGYSE 540
PGKEIHA+ +RLGLT+D+FVSNALTDMYAKC CL SARNVFNTSHKDEVSYNILI+GYSE
Sbjct: 481 PGKEIHAIGIRLGLTADMFVSNALTDMYAKCGCLHSARNVFNTSHKDEVSYNILILGYSE 540
Query: 541 TNDCLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFV 600
T+DCLESLNLFSEMRLLG+KPDVVSFVGVISACANLAAVKQGKEIHGVALRNH YSHLFV
Sbjct: 541 TSDCLESLNLFSEMRLLGRKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHFYSHLFV 600
Query: 601 SNSLLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTV 660
SNSLLDFYTKC RID+ACKVFNQILFKDVASWNTMILGYGMIGELETAI+MFE MRGDTV
Sbjct: 601 SNSLLDFYTKCARIDLACKVFNQILFKDVASWNTMILGYGMIGELETAITMFEEMRGDTV 660
Query: 661 QYDLVSYIAVLSACSHGGLVERGWQYFREMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
QYDLVSYIAVLSACSHGGLVE+GW+YF EMLAQ+LEPT+MHY C+VDLLGRAGFVEEAAE
Sbjct: 661 QYDLVSYIAVLSACSHGGLVEQGWKYFSEMLAQNLEPTQMHYACIVDLLGRAGFVEEAAE 720
Query: 721 LIRRLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGR 780
LIR LPIAPDANIWGALLGACRIY NVELG AAEHLFE+KPQHCGYYILLSNMYAE GR
Sbjct: 721 LIRCLPIAPDANIWGALLGACRIYRNVELGCWAAEHLFEIKPQHCGYYILLSNMYAEAGR 780
Query: 781 WDEVNKIRELMKSRGAKKNPGCSWVPIYDQVHAFVAEERAEGFESGGWLAES 830
WDEVN++R+LMKSRGAKKNPGCSWV I+DQVH F+AEERAEGFESGGWLAES
Sbjct: 781 WDEVNRVRDLMKSRGAKKNPGCSWVQIHDQVHTFMAEERAEGFESGGWLAES 831
BLAST of Lsi10G011130 vs. NCBI nr
Match:
XP_038901996.1 (pentatricopeptide repeat-containing protein At4g14170-like [Benincasa hispida])
HSP 1 Score: 1600.9 bits (4144), Expect = 0.0e+00
Identity = 778/830 (93.73%), Postives = 800/830 (96.39%), Query Frame = 0
Query: 1 MLQFCIRSSIVSPFPFSSQINRFQHRNFLQPILVSTLQSPLPSSPSTDPNSSIHVNLLTL 60
MLQFCIRSSIVSPFPF SQI RFQ+R+F QPI VS LQSP P ST+PNSSIH+NLLTL
Sbjct: 1 MLQFCIRSSIVSPFPFISQITRFQYRHFHQPIFVSALQSPFPLPRSTEPNSSIHINLLTL 60
Query: 61 CSNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQNCRTA 120
CSNAQSLPQTKQLHALCLLNGLLPRSVSLC+SLILNYAKFQHPESFCSLFHQTVQNCRTA
Sbjct: 61 CSNAQSLPQTKQLHALCLLNGLLPRSVSLCSSLILNYAKFQHPESFCSLFHQTVQNCRTA 120
Query: 121 FLWNTLIRAHSIVGNGTLDGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGMEVHG 180
FLWNTLIRAHSI GNGT DGFETYNRMVRVGVQLDDHTFPF+LKLCSD+FDI KGMEVHG
Sbjct: 121 FLWNTLIRAHSIAGNGTRDGFETYNRMVRVGVQLDDHTFPFLLKLCSDSFDIWKGMEVHG 180
Query: 181 VVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGDYRE 240
VVFKLGFDTDVYVGNTLLMLYGNC FLNDARRVFDEMPERDVVSWNT+IGL SVNGDYRE
Sbjct: 181 VVFKLGFDTDVYVGNTLLMLYGNCRFLNDARRVFDEMPERDVVSWNTIIGLFSVNGDYRE 240
Query: 241 ARNYYFWMTLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCNALV 300
ARNYYFWM LRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDS VT CNALV
Sbjct: 241 ARNYYFWMNLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSHVTICNALV 300
Query: 301 DAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKPNSF 360
DAYGKCGNVKALWQVFDEI ERNEVSWNA+INGLACKGRCWDALNVFKMMI+AGAKPNS
Sbjct: 301 DAYGKCGNVKALWQVFDEIFERNEVSWNAMINGLACKGRCWDALNVFKMMIDAGAKPNSI 360
Query: 361 TVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIFHNM 420
TVSSILPVLVELECF++GKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIFHNM
Sbjct: 361 TVSSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIFHNM 420
Query: 421 DRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLGPGK 480
RRNIVSWNAMIANYALNGL LEAIRF+ILMQETGERPNAVTFTNVLPACARLG LGPGK
Sbjct: 421 GRRNIVSWNAMIANYALNGLALEAIRFIILMQETGERPNAVTFTNVLPACARLGLLGPGK 480
Query: 481 EIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNTSHKDEVSYNILIIGYSETND 540
EIHAMAVRLG TSDLFVSNALTDMYAKC CL SARNVFNTSHKDEVSYNILIIGYSE+ND
Sbjct: 481 EIHAMAVRLGPTSDLFVSNALTDMYAKCGCLHSARNVFNTSHKDEVSYNILIIGYSESND 540
Query: 541 CLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFVSNS 600
CLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRN LYSHLFVSNS
Sbjct: 541 CLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNLLYSHLFVSNS 600
Query: 601 LLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTVQYD 660
LLDFYTKCGRID+ACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMR DTVQYD
Sbjct: 601 LLDFYTKCGRIDLACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRNDTVQYD 660
Query: 661 LVSYIAVLSACSHGGLVERGWQYFREMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAELIR 720
LVSYIAVLSACSHGGLVERGWQYF EMLAQHLEPTEMHYTC+VDLLGRAGFVEEAAELI+
Sbjct: 661 LVSYIAVLSACSHGGLVERGWQYFSEMLAQHLEPTEMHYTCLVDLLGRAGFVEEAAELIQ 720
Query: 721 RLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGRWDE 780
+LPIAPDANIWGALLGACRIYGNV+LG RAAEHLFELKPQHCGYYILLSN+YAETGRWDE
Sbjct: 721 QLPIAPDANIWGALLGACRIYGNVKLGCRAAEHLFELKPQHCGYYILLSNIYAETGRWDE 780
Query: 781 VNKIRELMKSRGAKKNPGCSWVPIYDQVHAFVAEERAEGFESGGWLAESV 831
VN+IRELMKSRGAKKNPGCSWV IYDQ+HAFVAEERAEGFESGGWLAESV
Sbjct: 781 VNRIRELMKSRGAKKNPGCSWVQIYDQLHAFVAEERAEGFESGGWLAESV 830
BLAST of Lsi10G011130 vs. NCBI nr
Match:
KAA0061752.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1550.0 bits (4012), Expect = 0.0e+00
Identity = 754/833 (90.52%), Postives = 791/833 (94.96%), Query Frame = 0
Query: 1 MLQFCIRSSIVS--PFPFSSQINRFQHRNFLQPILVSTLQSPL-PSSPSTDPNSSIHVNL 60
ML+ CIRSSIVS PFPF SQI RF++RNF QPILVS LQSPL P S STD NS IH+NL
Sbjct: 1 MLELCIRSSIVSPLPFPFPSQITRFRYRNFHQPILVSALQSPLSPPSSSTDSNSFIHINL 60
Query: 61 LTLCSNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQNC 120
LTLCS QSL QTKQ+HAL +LNG LPRSVSLCASLILNYAKFQHPESFCSLF+QT QNC
Sbjct: 61 LTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPESFCSLFNQTFQNC 120
Query: 121 RTAFLWNTLIRAHSIVGNGTLDGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGME 180
RTAFLWNTLIRAHSI NGTLDGFETYNRMVR+GVQLDDHTFPFVLKLCSD+FDICKGME
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTLDGFETYNRMVRLGVQLDDHTFPFVLKLCSDSFDICKGME 180
Query: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD
Sbjct: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
Query: 241 YREARNYYFWMTLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCN 300
Y+EARNYYFWM LRSGIKPNLVSVI+LLPISA LEDEEMTRRIHC++VKVGLDSQVTTCN
Sbjct: 241 YKEARNYYFWMILRSGIKPNLVSVISLLPISAALEDEEMTRRIHCFSVKVGLDSQVTTCN 300
Query: 301 ALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKP 360
ALVDAYGKCG+VKALWQVF+E+VERNEVSWN+IINGLACKGRCWDAL F+MMI+AGAKP
Sbjct: 301 ALVDAYGKCGSVKALWQVFNEMVERNEVSWNSIINGLACKGRCWDALKAFRMMIDAGAKP 360
Query: 361 NSFTVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIF 420
NS T+SSILPVLVELECF++GKEIHGFSMR+GTETDIFIANSLIDMYAKSGRSTEAS+IF
Sbjct: 361 NSVTISSILPVLVELECFKAGKEIHGFSMRIGTETDIFIANSLIDMYAKSGRSTEASTIF 420
Query: 421 HNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLG 480
HN+DRRN+V+WNAMIANYALN LPLEAIRFVI MQETGE PNAVTFTNVLPACARLGFLG
Sbjct: 421 HNLDRRNVVTWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLG 480
Query: 481 PGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNTSHKDEVSYNILIIGYSE 540
PGKEIHAM VR+GLTSDLFVSN+L DMYAKC L SARN+FNTSHKDEVSYNILIIGYSE
Sbjct: 481 PGKEIHAMVVRIGLTSDLFVSNSLIDMYAKCGSLCSARNLFNTSHKDEVSYNILIIGYSE 540
Query: 541 TNDCLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFV 600
TNDC +SLNLFSEMRLLGKKPDVVSFVGVISACANLAA+KQGKEIHGVALRNHLYSHLFV
Sbjct: 541 TNDCFQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEIHGVALRNHLYSHLFV 600
Query: 601 SNSLLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTV 660
SNSLLDFYTKCGRIDIAC+VFNQILFKDVASWNTMILGYGMIGELETAISMFEAMR DTV
Sbjct: 601 SNSLLDFYTKCGRIDIACRVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTV 660
Query: 661 QYDLVSYIAVLSACSHGGLVERGWQYFREMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
QYDLVSYIAVLSACSHGGLVERGWQYF EMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE
Sbjct: 661 QYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
Query: 721 LIRRLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGR 780
LI+RLPIAPDANIWGALLGACRIYGNVELG RAAEHLFELKPQHCGYYILLSN+YAETGR
Sbjct: 721 LIQRLPIAPDANIWGALLGACRIYGNVELGCRAAEHLFELKPQHCGYYILLSNIYAETGR 780
Query: 781 WDEVNKIRELMKSRGAKKNPGCSWVPIYDQVHAFVAEERAEGFESGGWLAESV 831
WDE N+IRELMKSRGAKKNPGCSWV I DQVH+FVAEER EGFESG WLAESV
Sbjct: 781 WDEANRIRELMKSRGAKKNPGCSWVQICDQVHSFVAEERVEGFESGDWLAESV 833
BLAST of Lsi10G011130 vs. NCBI nr
Match:
TYJ96092.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1545.4 bits (4000), Expect = 0.0e+00
Identity = 752/833 (90.28%), Postives = 789/833 (94.72%), Query Frame = 0
Query: 1 MLQFCIRSSIVS--PFPFSSQINRFQHRNFLQPILVSTLQSPL-PSSPSTDPNSSIHVNL 60
ML+ CIRSSIVS P PF SQI RF++RNF QPILVS LQSPL P S STD NS IH+NL
Sbjct: 1 MLELCIRSSIVSPLPIPFPSQITRFRYRNFHQPILVSALQSPLSPPSSSTDSNSYIHINL 60
Query: 61 LTLCSNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQNC 120
LTLCS QSL QTKQ+HAL +LNG LPRSVSLCASLILNYAKFQHPESFCSLF+QT QNC
Sbjct: 61 LTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPESFCSLFNQTFQNC 120
Query: 121 RTAFLWNTLIRAHSIVGNGTLDGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGME 180
RTAFLWNTLIRAHSI NGTLDGFETYNRMVR+GVQLDDHTFPFVLKLCSD+FDICKGME
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTLDGFETYNRMVRLGVQLDDHTFPFVLKLCSDSFDICKGME 180
Query: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
VHGVVFKLGFDTDVYV NTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD
Sbjct: 181 VHGVVFKLGFDTDVYVSNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
Query: 241 YREARNYYFWMTLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCN 300
Y+EARNYYFWM LRSGIKPNLVSVI+LLPISA LEDEEMTRRIHC++VKVGLDSQVTTCN
Sbjct: 241 YKEARNYYFWMILRSGIKPNLVSVISLLPISAALEDEEMTRRIHCFSVKVGLDSQVTTCN 300
Query: 301 ALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKP 360
ALVDAYGKCG+VKALWQVF+E+VERNEVSWN+IINGLACKGRCWDAL F+MMI+AGAKP
Sbjct: 301 ALVDAYGKCGSVKALWQVFNEMVERNEVSWNSIINGLACKGRCWDALKAFRMMIDAGAKP 360
Query: 361 NSFTVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIF 420
NS T+SSILPVLVELECF++GKEIHGFSMR+GTETDIFIANSLIDMYAKSGRSTEAS+IF
Sbjct: 361 NSVTISSILPVLVELECFKAGKEIHGFSMRIGTETDIFIANSLIDMYAKSGRSTEASTIF 420
Query: 421 HNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLG 480
HN+DRRN+V+WNAMIANYALN LPLEAIRFVI MQETGE PNAVTFTNVLPACARLGFLG
Sbjct: 421 HNLDRRNVVTWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLG 480
Query: 481 PGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNTSHKDEVSYNILIIGYSE 540
PGKEIHAM VR+GLTSDLFVSN+L DMYAKC L SARN+FNTSHKDEVSYNILIIGYSE
Sbjct: 481 PGKEIHAMVVRIGLTSDLFVSNSLIDMYAKCGSLCSARNLFNTSHKDEVSYNILIIGYSE 540
Query: 541 TNDCLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFV 600
TNDC +SLNLFSEMRLLGKKPDVVSFVGVISACANLAA+KQGKEIHGVALRNHLYSHLFV
Sbjct: 541 TNDCFQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEIHGVALRNHLYSHLFV 600
Query: 601 SNSLLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTV 660
SNSLLDFYTKCGRIDIAC+VFNQILFKDVASWNTMILGYGMIGELETAISMFEAMR DTV
Sbjct: 601 SNSLLDFYTKCGRIDIACRVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTV 660
Query: 661 QYDLVSYIAVLSACSHGGLVERGWQYFREMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
QYDLVSYIAVLSACSHGGLVERGWQYF EMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE
Sbjct: 661 QYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
Query: 721 LIRRLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGR 780
LI+RLPIAPDANIWGALLGACRIYGNVELG RAAEHLFELKPQHCGYYILLSN+YAETGR
Sbjct: 721 LIQRLPIAPDANIWGALLGACRIYGNVELGCRAAEHLFELKPQHCGYYILLSNIYAETGR 780
Query: 781 WDEVNKIRELMKSRGAKKNPGCSWVPIYDQVHAFVAEERAEGFESGGWLAESV 831
WDE N+IRELMKSRGAKKNPGCSWV I DQVH+FVAEER EGFESG WLAESV
Sbjct: 781 WDEANRIRELMKSRGAKKNPGCSWVQICDQVHSFVAEERVEGFESGDWLAESV 833
BLAST of Lsi10G011130 vs. NCBI nr
Match:
XP_004140275.1 (pentatricopeptide repeat-containing protein At4g14170 [Cucumis sativus])
HSP 1 Score: 1544.6 bits (3998), Expect = 0.0e+00
Identity = 753/833 (90.40%), Postives = 788/833 (94.60%), Query Frame = 0
Query: 1 MLQFCIRSSIVS--PFPFSSQINRFQHRNFLQPILVSTLQSPL-PSSPSTDPNSSIHVNL 60
ML+FCIRSSIVS PFPF SQI RFQ+RNFLQPILVS LQSPL P S STDPNS IH+NL
Sbjct: 1 MLEFCIRSSIVSPLPFPFPSQIIRFQYRNFLQPILVSALQSPLSPPSSSTDPNSYIHINL 60
Query: 61 LTLCSNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQNC 120
LTLCS QSL QTKQ+HAL +LNG LPRSVSLCASLILNYAKFQHP SFCSLF+QT QNC
Sbjct: 61 LTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNC 120
Query: 121 RTAFLWNTLIRAHSIVGNGTLDGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGME 180
RTAFLWNTLIRAHSI NGT DGFETYNRMVR GVQLDDHTFPFVLKLCSD+FDICKGME
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGME 180
Query: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARR+FDEMPERDVVSWNT+IGLLSVNGD
Sbjct: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGD 240
Query: 241 YREARNYYFWMTLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCN 300
Y EARNYYFWM LRS IKPNLVSVI+LLPISA LEDEEMTRRIHCY+VKVGLDSQVTTCN
Sbjct: 241 YTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCN 300
Query: 301 ALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKP 360
ALVDAYGKCG+VKALWQVF+E VE+NEVSWN+IINGLACKGRCWDALN F+MMI+AGA+P
Sbjct: 301 ALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQP 360
Query: 361 NSFTVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIF 420
NS T+SSILPVLVELECF++GKEIHGFSMRMGTETDIFIANSLIDMYAKSG STEAS+IF
Sbjct: 361 NSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIF 420
Query: 421 HNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLG 480
HN+DRRNIVSWNAMIANYALN LPLEAIRFVI MQETGE PNAVTFTNVLPACARLGFLG
Sbjct: 421 HNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLG 480
Query: 481 PGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNTSHKDEVSYNILIIGYSE 540
PGKEIHAM VR+GLTSDLFVSN+L DMYAKC CL SARNVFNTS KDEVSYNILIIGYSE
Sbjct: 481 PGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEVSYNILIIGYSE 540
Query: 541 TNDCLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFV 600
T+DCL+SLNLFSEMRLLGKKPDVVSFVGVISACANLAA+KQGKE+HGVALRNHLYSHLFV
Sbjct: 541 TDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFV 600
Query: 601 SNSLLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTV 660
SNSLLDFYTKCGRIDIAC++FNQILFKDVASWNTMILGYGMIGELETAISMFEAMR DTV
Sbjct: 601 SNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTV 660
Query: 661 QYDLVSYIAVLSACSHGGLVERGWQYFREMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
QYDLVSYIAVLSACSHGGLVERGWQYF EMLAQ LEPTEMHYTCMVDLLGRAGFVEEAA+
Sbjct: 661 QYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAK 720
Query: 721 LIRRLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGR 780
LI++LPIAPDANIWGALLGACRIYGNVELG RAAEHLFELKPQHCGYYILLSN+YAETGR
Sbjct: 721 LIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGR 780
Query: 781 WDEVNKIRELMKSRGAKKNPGCSWVPIYDQVHAFVAEERAEGFESGGWLAESV 831
WDE NKIRELMKSRGAKKNPGCSWV IYDQVHAFVAEER EGFE G WLAESV
Sbjct: 781 WDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEERVEGFELGDWLAESV 833
BLAST of Lsi10G011130 vs. NCBI nr
Match:
XP_008449620.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g14170-like [Cucumis melo])
HSP 1 Score: 1543.9 bits (3996), Expect = 0.0e+00
Identity = 751/833 (90.16%), Postives = 788/833 (94.60%), Query Frame = 0
Query: 1 MLQFCIRSSIVS--PFPFSSQINRFQHRNFLQPILVSTLQSPL-PSSPSTDPNSSIHVNL 60
ML+ CIRSSIVS P PF SQI RF++RNF QPILVS LQSPL P S STD NS IH+NL
Sbjct: 1 MLELCIRSSIVSPLPIPFPSQITRFRYRNFHQPILVSALQSPLSPPSSSTDSNSYIHINL 60
Query: 61 LTLCSNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQNC 120
LTLCS QSL QTKQ+HAL +LNG LPRSVSLCASLILNYAKFQHPESFCSLF+QT QNC
Sbjct: 61 LTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPESFCSLFNQTFQNC 120
Query: 121 RTAFLWNTLIRAHSIVGNGTLDGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGME 180
RTAFLWNTLIRAHSI NGTLDGFETYNRMVR+GVQLDDHTFPFVLKLCSD+FDICKGME
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTLDGFETYNRMVRLGVQLDDHTFPFVLKLCSDSFDICKGME 180
Query: 181 VHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
VHGVVFKLGFDTDVYV NTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD
Sbjct: 181 VHGVVFKLGFDTDVYVSNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGD 240
Query: 241 YREARNYYFWMTLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCN 300
Y+EARNYYFWM LRSGIKPNLVSVI+LLPISA LEDEEMTRRIHC++VKVGLDSQVTTCN
Sbjct: 241 YKEARNYYFWMILRSGIKPNLVSVISLLPISAALEDEEMTRRIHCFSVKVGLDSQVTTCN 300
Query: 301 ALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKP 360
ALVDAYGKCG+VKALWQVF+E+VERNEVSWN+IINGLACKGRCWD L F+MMI+AGAKP
Sbjct: 301 ALVDAYGKCGSVKALWQVFNEMVERNEVSWNSIINGLACKGRCWDTLKAFRMMIDAGAKP 360
Query: 361 NSFTVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIF 420
NS T+SSILPVLVELECF++GKEIHGFSMR+GTETDIFIANSLIDMYAKSGRSTEAS+IF
Sbjct: 361 NSVTISSILPVLVELECFKAGKEIHGFSMRIGTETDIFIANSLIDMYAKSGRSTEASTIF 420
Query: 421 HNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLG 480
HN+DRRN+V+WNAMIANYALN LPLEAIRFVI MQETGE PNAVTFTNVLPACARLGFLG
Sbjct: 421 HNLDRRNVVTWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLG 480
Query: 481 PGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNTSHKDEVSYNILIIGYSE 540
PGKEIHAM VR+GLTSDLFVSN+L DMYAKC L SARN+FNTSHKDEVSYNILIIGYSE
Sbjct: 481 PGKEIHAMVVRIGLTSDLFVSNSLIDMYAKCGSLCSARNLFNTSHKDEVSYNILIIGYSE 540
Query: 541 TNDCLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFV 600
TNDC +SLNLFSEMRLLGKKPDVVSFVGVISACANLAA+KQGKEIHGVALRNHLYSHLFV
Sbjct: 541 TNDCFQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEIHGVALRNHLYSHLFV 600
Query: 601 SNSLLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTV 660
SNSLLDFYTKCGRIDIAC+VFNQILFKDVASWNTMILGYGMIGELETAISMFEAMR DTV
Sbjct: 601 SNSLLDFYTKCGRIDIACRVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTV 660
Query: 661 QYDLVSYIAVLSACSHGGLVERGWQYFREMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
QYDLVSYIAVLSACSHGGLVERGWQYF EMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE
Sbjct: 661 QYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAE 720
Query: 721 LIRRLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGR 780
LI+RLPIAPDANIWGALLGACRIYGNVELG RAAEHLFELKPQHCGYYILLSN+YAETGR
Sbjct: 721 LIQRLPIAPDANIWGALLGACRIYGNVELGCRAAEHLFELKPQHCGYYILLSNIYAETGR 780
Query: 781 WDEVNKIRELMKSRGAKKNPGCSWVPIYDQVHAFVAEERAEGFESGGWLAESV 831
WDE N+IRELMKSRGAKKNPGCSWV I DQVH+FVAEER EGFESG WLAESV
Sbjct: 781 WDEANRIRELMKSRGAKKNPGCSWVQICDQVHSFVAEERVEGFESGDWLAESV 833
BLAST of Lsi10G011130 vs. TAIR 10
Match:
AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 486.5 bits (1251), Expect = 4.3e-137
Identity = 245/689 (35.56%), Postives = 391/689 (56.75%), Query Frame = 0
Query: 130 HSIVGNGTL-DGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGMEVHGVVFKLGFD 189
H + NG L + + N M + V +D+ F +++LC +G +V+ +
Sbjct: 67 HGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSS 126
Query: 190 TDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGDYREARNYYFWM 249
V +GN L ++ G L DA VF +M ER++ SWN ++G + G + EA Y M
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
Query: 250 TLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCNALVDAYGKCGN 309
G+KP++ + +L G+ D + +H + V+ G + + NAL+ Y KCG+
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD 246
Query: 310 VKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKPNSFTVSSILPV 369
VK+ +FD + R+ +SWNA+I+G G C + L +F M P+ T++S++
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 370 LVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIFHNMDRRNIVSW 429
L R G++IH + + G DI + NSL MY +G EA +F M+R++IVSW
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSW 366
Query: 430 NAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLGPGKEIHAMAVR 489
MI+ Y N LP +AI +M + +P+ +T VL ACA LG L G E+H +A++
Sbjct: 367 TTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK 426
Query: 490 LGLTSDLFVSNALTDMYAKCSCLLSARNVF-NTSHKDEVSYNILIIGYSETNDCLESLNL 549
L S + V+N L +MY+KC C+ A ++F N K+ +S+ +I G N C E+L
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIF 486
Query: 550 FSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFVSNSLLDFYTK 609
+M++ +P+ ++ ++ACA + A+ GKEIH LR + F+ N+LLD Y +
Sbjct: 487 LRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVR 546
Query: 610 CGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTVQYDLVSYIAV 669
CGR++ A FN KDV SWN ++ GY G+ + +F+ M V+ D +++I++
Sbjct: 547 CGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISL 606
Query: 670 LSACSHGGLVERGWQYFREMLAQHLEPTEMHYTCMVDLLGRAGFVEEAAELIRRLPIAPD 729
L CS +V +G YF +M + P HY C+VDLLGRAG ++EA + I+++P+ PD
Sbjct: 607 LCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPD 666
Query: 730 ANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNKIREL 789
+WGALL ACRI+ ++LG +A+H+FEL + GYYILL N+YA+ G+W EV K+R +
Sbjct: 667 PAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRM 726
Query: 790 MKSRGAKKNPGCSWVPIYDQVHAFVAEER 817
MK G + GCSWV + +VHAF+++++
Sbjct: 727 MKENGLTVDAGCSWVEVKGKVHAFLSDDK 753
BLAST of Lsi10G011130 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 481.1 bits (1237), Expect = 1.8e-135
Identity = 254/665 (38.20%), Postives = 390/665 (58.65%), Query Frame = 0
Query: 154 LDDHTFPFVLKLCSDTFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRV 213
+D T VL+LC+D+ + G EV + GF D +G+ L ++Y NCG L +A RV
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 214 FDEMPERDVVSWNTVIGLLSVNGDYREARNYYFWMTLRSGIKPNLVSVITLLPISAGLED 273
FDE+ + WN ++ L+ +GD+ + + M + SG++ + + + + L
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSSLRS 211
Query: 274 EEMTRRIHCYTVKVGLDSQVTTCNALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIING 333
++H + +K G + + N+LV Y K V + +VFDE+ ER+ +SWN+IING
Sbjct: 212 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 271
Query: 334 LACKGRCWDALNVFKMMINAGAKPNSFTVSSILPVLVELECFRSGKEIHGFSMRMGTETD 393
G L+VF M+ +G + + T+ S+ + G+ +H ++ +
Sbjct: 272 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 331
Query: 394 IFIANSLIDMYAKSGRSTEASSIFHNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQE 453
N+L+DMY+K G A ++F M R++VS+ +MIA YA GL EA++ M+E
Sbjct: 332 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 391
Query: 454 TGERPNAVTFTNVLPACARLGFLGPGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLS 513
G P+ T T VL CAR L GK +H L D+FVSNAL DMYAKC +
Sbjct: 392 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 451
Query: 514 ARNVFNTSH-KDEVSYNILIIGYSETNDCLESLNLFSEMRLLGKK---PDVVSFVGVISA 573
A VF+ KD +S+N +I GYS+ E+L+LF+ LL +K PD + V+ A
Sbjct: 452 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN--LLLEEKRFSPDERTVACVLPA 511
Query: 574 CANLAAVKQGKEIHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACKVFNQILFKDVASW 633
CA+L+A +G+EIHG +RN +S V+NSL+D Y KCG + +A +F+ I KD+ SW
Sbjct: 512 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 571
Query: 634 NTMILGYGMIGELETAISMFEAMRGDTVQYDLVSYIAVLSACSHGGLVERGWQYFREMLA 693
MI GYGM G + AI++F MR ++ D +S++++L ACSH GLV+ GW++F M
Sbjct: 572 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 631
Query: 694 Q-HLEPTEMHYTCMVDLLGRAGFVEEAAELIRRLPIAPDANIWGALLGACRIYGNVELGS 753
+ +EPT HY C+VD+L R G + +A I +PI PDA IWGALL CRI+ +V+L
Sbjct: 632 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 691
Query: 754 RAAEHLFELKPQHCGYYILLSNMYAETGRWDEVNKIRELMKSRGAKKNPGCSWVPIYDQV 813
+ AE +FEL+P++ GYY+L++N+YAE +W++V ++R+ + RG +KNPGCSW+ I +V
Sbjct: 692 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 751
BLAST of Lsi10G011130 vs. TAIR 10
Match:
AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 469.5 bits (1207), Expect = 5.4e-132
Identity = 267/753 (35.46%), Postives = 421/753 (55.91%), Query Frame = 0
Query: 62 SNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQNCRTAF 121
S++ +L + +++HAL + G L S LI Y+ F+ P S S+F + V + +
Sbjct: 15 SSSSNLNELRRIHALVISLG-LDSSDFFSGKLIDKYSHFREPASSLSVFRR-VSPAKNVY 74
Query: 122 LWNTLIRAHSIVGNGTL-DGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDICKGMEVHG 181
LWN++IRA S NG + E Y ++ V D +TFP V+K C+ FD G V+
Sbjct: 75 LWNSIIRAFS--KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYE 134
Query: 182 VVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSVNGDYRE 241
+ +GF++D++VGN L+ +Y G L AR+VFDEMP RD+VSWN++I S +G Y E
Sbjct: 135 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 194
Query: 242 ARNYYFWMTLRSGIKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDSQVTTCNALV 301
A Y + S I P+ +V ++LP L + + +H + +K G++S V N LV
Sbjct: 195 ALEIYHELK-NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 254
Query: 302 DAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMINAGAKPNSF 361
Y K +VFDE+ R+ VS+N +I G +++ +F ++ KP+
Sbjct: 255 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLL 314
Query: 362 TVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGRSTEASSIFHNM 421
TVSS+L L K I+ + ++ G + + N LID+YAK G A +F++M
Sbjct: 315 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 374
Query: 422 DRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPACARLGFLGPGK 481
+ ++ VSWN++I+ Y +G +EA++ +M E+ + +T+ ++ RL L GK
Sbjct: 375 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 434
Query: 482 EIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNT-SHKDEVSYNILIIGYSETN 541
+H+ ++ G+ DL VSNAL DMYAKC + + +F++ D V++N +I
Sbjct: 435 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFG 494
Query: 542 DCLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALRNHLYSHLFVSN 601
D L + ++MR PD+ +F+ + CA+LAA + GKEIH LR S L + N
Sbjct: 495 DFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 554
Query: 602 SLLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRGDTVQY 661
+L++ Y+KCG ++ + +VF ++ +DV +W MI YGM GE E A+ F M +
Sbjct: 555 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 614
Query: 662 DLVSYIAVLSACSHGGLVERGWQYFREMLAQH-LEPTEMHYTCMVDLLGRAGFVEEAAEL 721
D V +IA++ ACSH GLV+ G F +M + ++P HY C+VDLL R+ + +A E
Sbjct: 615 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 674
Query: 722 IRRLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYILLSNMYAETGRW 781
I+ +PI PDA+IW ++L ACR G++E R + + EL P GY IL SN YA +W
Sbjct: 675 IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKW 734
Query: 782 DEVNKIRELMKSRGAKKNPGCSWVPIYDQVHAF 812
D+V+ IR+ +K + KNPG SW+ + VH F
Sbjct: 735 DKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVF 761
BLAST of Lsi10G011130 vs. TAIR 10
Match:
AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 468.8 bits (1205), Expect = 9.2e-132
Identity = 262/776 (33.76%), Postives = 428/776 (55.15%), Query Frame = 0
Query: 57 LLTLCSNAQSLPQTKQLHALCLLNGLLPRSVSLCASLILNYAKFQHPESFCSLFHQTVQN 116
LL + + +++H L + L LC +I YA P+ S F
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDD--SRFVFDALR 149
Query: 117 CRTAFLWNTLIRAHSIVGNGTLDG-FETYNRMVRVGVQLDDH-TFPFVLKLCSDTFDICK 176
+ F WN +I ++S N D ET+ M+ L DH T+P V+K C+ D+
Sbjct: 150 SKNLFQWNAVISSYS--RNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 209
Query: 177 GMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLLSV 236
G+ VHG+V K G DV+VGN L+ YG GF+ DA ++FD MPER++VSWN++I + S
Sbjct: 210 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 269
Query: 237 NGDYREARNYYFWMTLRSG---IKPNLVSVITLLPISAGLEDEEMTRRIHCYTVKVGLDS 296
NG E+ M +G P++ +++T+LP+ A + + + +H + VK+ LD
Sbjct: 270 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 329
Query: 297 QVTTCNALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALNVFKMMI 356
++ NAL+D Y KCG + +F +N VSWN ++ G + +G +V + M+
Sbjct: 330 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 389
Query: 357 NAG--AKPNSFTVSSILPVLVELECFRSGKEIHGFSMRMGTETDIFIANSLIDMYAKSGR 416
G K + T+ + +PV S KE+H +S++ + +AN+ + YAK G
Sbjct: 390 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 449
Query: 417 STEASSIFHNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQETGERPNAVTFTNVLPA 476
+ A +FH + + + SWNA+I +A + P ++ + M+ +G P++ T ++L A
Sbjct: 450 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 509
Query: 477 CARLGFLGPGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVFNT-SHKDEVSY 536
C++L L GKE+H +R L DLFV ++ +Y C L + + +F+ K VS+
Sbjct: 510 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 569
Query: 537 NILIIGYSETNDCLESLNLFSEMRLLGKKPDVVSFVGVISACANLAAVKQGKEIHGVALR 596
N +I GY + +L +F +M L G + +S + V AC+ L +++ G+E H AL+
Sbjct: 570 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 629
Query: 597 NHLYSHLFVSNSLLDFYTKCGRIDIACKVFNQILFKDVASWNTMILGYGMIGELETAISM 656
+ L F++ SL+D Y K G I + KVFN + K ASWN MI+GYG+ G + AI +
Sbjct: 630 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKL 689
Query: 657 FEAMRGDTVQYDLVSYIAVLSACSHGGLVERGWQYFREMLAQH-LEPTEMHYTCMVDLLG 716
FE M+ D ++++ VL+AC+H GL+ G +Y +M + L+P HY C++D+LG
Sbjct: 690 FEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLG 749
Query: 717 RAGFVEEAAELI-RRLPIAPDANIWGALLGACRIYGNVELGSRAAEHLFELKPQHCGYYI 776
RAG +++A ++ + D IW +LL +CRI+ N+E+G + A LFEL+P+ Y+
Sbjct: 750 RAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYV 809
Query: 777 LLSNMYAETGRWDEVNKIRELMKSRGAKKNPGCSWVPIYDQVHAFVAEER-AEGFE 822
LLSN+YA G+W++V K+R+ M +K+ GCSW+ + +V +FV ER +GFE
Sbjct: 810 LLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFE 861
BLAST of Lsi10G011130 vs. TAIR 10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 456.4 bits (1173), Expect = 4.7e-128
Identity = 256/724 (35.36%), Postives = 414/724 (57.18%), Query Frame = 0
Query: 114 VQNCRTAFLWNTLIRAHSIVGNGTLDGFETYNRMVRVGVQLDDHTFPFVLKLCSDTFDIC 173
+ R+ W L+R+ + N + TY M+ +G++ D++ FP +LK +D D+
Sbjct: 56 ISQSRSPEWWIDLLRS-KVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDME 115
Query: 174 KGMEVHGVVFKLGFDTD-VYVGNTLLMLYGNCGFLNDARRVFDEMPERDVVSWNTVIGLL 233
G ++H V+K G+ D V V NTL+ LY CG +VFD + ER+ VSWN++I L
Sbjct: 116 LGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSL 175
Query: 234 SVNGDYREARNYYFWMTLRSGIKPN---LVSVITL---LPISAGLEDEEMTRRIHCYTVK 293
+ A + M L ++P+ LVSV+T LP+ GL M +++H Y ++
Sbjct: 176 CSFEKWEMALEAFRCM-LDENVEPSSFTLVSVVTACSNLPMPEGL---MMGKQVHAYGLR 235
Query: 294 VG-LDSQVTTCNALVDAYGKCGNVKALWQVFDEIVERNEVSWNAIINGLACKGRCWDALN 353
G L+S + N LV YGK G + + + R+ V+WN +++ L + +AL
Sbjct: 236 KGELNSFI--INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE 295
Query: 354 VFKMMINAGAKPNSFTVSSILPVLVELECFRSGKEIHGFSMRMGT-ETDIFIANSLIDMY 413
+ M+ G +P+ FT+SS+LP LE R+GKE+H ++++ G+ + + F+ ++L+DMY
Sbjct: 296 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 355
Query: 414 AKSGRSTEASSIFHNMDRRNIVSWNAMIANYALNGLPLEAIRFVILMQET-GERPNAVTF 473
+ +F M R I WNAMIA Y+ N EA+ I M+E+ G N+ T
Sbjct: 356 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 415
Query: 474 TNVLPACARLGFLGPGKEIHAMAVRLGLTSDLFVSNALTDMYAKCSCLLSARNVF-NTSH 533
V+PAC R G + IH V+ GL D FV N L DMY++ + A +F
Sbjct: 416 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED 475
Query: 534 KDEVSYNILIIGYSETNDCLESLNLFSEMRLLGK-----------KPDVVSFVGVISACA 593
+D V++N +I GY + ++L L +M+ L + KP+ ++ + ++ +CA
Sbjct: 476 RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 535
Query: 594 NLAAVKQGKEIHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACKVFNQILFKDVASWNT 653
L+A+ +GKEIH A++N+L + + V ++L+D Y KCG + ++ KVF+QI K+V +WN
Sbjct: 536 ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNV 595
Query: 654 MILGYGMIGELETAISMFEAMRGDTVQYDLVSYIAVLSACSHGGLVERGWQYFREMLAQH 713
+I+ YGM G + AI + M V+ + V++I+V +ACSH G+V+ G + F M +
Sbjct: 596 IIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDY 655
Query: 714 -LEPTEMHYTCMVDLLGRAGFVEEAAELIRRLP-IAPDANIWGALLGACRIYGNVELGSR 773
+EP+ HY C+VDLLGRAG ++EA +L+ +P A W +LLGA RI+ N+E+G
Sbjct: 656 GVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEI 715
Query: 774 AAEHLFELKPQHCGYYILLSNMYAETGRWDEVNKIRELMKSRGAKKNPGCSWVPIYDQVH 814
AA++L +L+P +Y+LL+N+Y+ G WD+ ++R MK +G +K PGCSW+ D+VH
Sbjct: 716 AAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVH 772
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9M9E2 | 6.0e-136 | 35.56 | Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... | [more] |
| Q9SN39 | 2.5e-134 | 38.20 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
| Q9SS60 | 7.6e-131 | 35.46 | Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... | [more] |
| Q0WN60 | 1.3e-130 | 33.76 | Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX... | [more] |
| Q7Y211 | 6.7e-127 | 35.36 | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7V0P3 | 0.0e+00 | 90.52 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A5D3B8B5 | 0.0e+00 | 90.28 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A0A0KEH6 | 0.0e+00 | 90.40 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G428560 PE=4 SV=1 | [more] |
| A0A1S3BND4 | 0.0e+00 | 90.16 | pentatricopeptide repeat-containing protein At4g14170-like OS=Cucumis melo OX=36... | [more] |
| A0A6J1DHT8 | 0.0e+00 | 86.42 | pentatricopeptide repeat-containing protein At4g14170-like OS=Momordica charanti... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038901996.1 | 0.0e+00 | 93.73 | pentatricopeptide repeat-containing protein At4g14170-like [Benincasa hispida] | [more] |
| KAA0061752.1 | 0.0e+00 | 90.52 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
| TYJ96092.1 | 0.0e+00 | 90.28 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
| XP_004140275.1 | 0.0e+00 | 90.40 | pentatricopeptide repeat-containing protein At4g14170 [Cucumis sativus] | [more] |
| XP_008449620.1 | 0.0e+00 | 90.16 | PREDICTED: pentatricopeptide repeat-containing protein At4g14170-like [Cucumis m... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G15510.1 | 4.3e-137 | 35.56 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G18750.1 | 1.8e-135 | 38.20 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G03580.1 | 5.4e-132 | 35.46 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G18485.1 | 9.2e-132 | 33.76 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G57430.1 | 4.7e-128 | 35.36 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
