Lsi10G011000 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi10G011000
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Locationchr10: 15261270 .. 15264364 (+)
RNA-Seq ExpressionLsi10G011000
SyntenyLsi10G011000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCCTTCTTCTTCTCTGACCAGCTCCGAAGAGTCCACTGCAAGCAGCTTCGATCGACTTCTTCTCCTGTCTCTCGTTTGGGTTTGTGATGTAAAACGAGATTGAGCACCAGAGAACAAGAGAGCTCGAGAACAAGAGAACGAGAGTGCGAGACCGCGAGAAAGAGAGGAATTCAACAAAGAGGAAGAGAGAGCCAAGAGCGAGAACAAAGGCCAACCAACGTGAGTGAGATTTCATTTTGATAATTTCACCCGAATGTAACATCAGCAAAGGATCAAAAAACCTCAAATTCAAAATGTATGACAATTTTCATTTTCTCCCCCATTTCTGAGTCATCCATCCCCCGAAATCCAGAAAATGTGATTAGAGTAACAAAGTGTACTATAAAGTCTATAATGGCATTAATAGATAACCCACTTTTTACCCTAAGAACTCTCTCTCTCTCTCATGCTAAATAAAGGACAGATCTATTTTAACAAGGAAGTGAAATGAATGTTGGAAAAACACAATTGGTTTTTAATATTTTTTTTTTTTTTTTTTAGATAAAGAAGTTTGTTTTTGTTTTGGTTTTGATGGTGTCTAATTTGGATGTTTCCTATTTTAAAGTTGTTTGTATTTAGAACAAACATATATAAAGAGAAGGAAGTTTTTTATTTGAAGATTTCTCACATTTATTTTCCCTCTCTGTTGCAGATCTTCTTACCTCCCCCTCTCCTCTGGAGACCTTATGGATCCTCGGACGGAGGTAATTTAATTATTTTCCTCTCTTGATTATCCCATTAATCATGATTATGCCATTAATTTATTTCAATCCATATCCTTTTTATTTAAATTTTCATTGTTTAGGTTATGCTTTTAAATCCAAATCACAATAATGAGTTCAATCTGGGCTTTAAATCTTTCTAACTTTCAATTTGTCTTTAAATGCTATATTAATTTCAATTCAAGTGAGTCCCTATGAAAATTCTCTCATTTCCATCTCAGACAGTATGTAATAATGTCGTATTATTAAGATCTCAAAAGAAAGACAAAGCAGCTTTCAGAAGATAATTGTGGCTCATGGTTTAATAAAATTATGTTTTTTTTTTCAAGTAATTAATAAATTTATGTAAGATGGTTTGGCTTGAAACTTTGGGAATCTTTTGAATTTAGATTAGGTAAAAGAATGAATTATAGGAACTCATAGTTCAAAAATCTGATCAAGAGATGTTAACCTTCCAAGATTTCCAGCTACGAAAAAATTCGCCTAGAACGTCCATAGTTCTTTTCTGAAATAGGAAGGGAAAAACTTTCCTGGAATTTTTTTTTTTCTCTATCCTAATCCAAGAGAATTCTTGTATTTGATACTCTTGCATCTGAACCAATTCCTGGCAAAAATCGGCACCTGATGGCCCTGACATTCCCCTACGACCCGGCTACGTCATCATTACTTGTCTTGAATGCTTCTAAGAGTAAAAGTTGTCCTCACAAACCAACACGGATCCTTTCAACATGCTTTGTCCTCACTCACATGCATCCTAAGTTAAGCATGCTTAGCTTGAAGCACTCCTATGTTGTGCGATCTCCTGGAAATTTTCATAGGATGCATGTGAATGAGGACAAAGAATGCTGAAAGGACCCGTGTTGGTTTGTCGGGACAATTTTCACTCTTAGAAGCATTCAAGACAAGTAAGGATGATGTAGCCGGGTCGTAGAGGACGCAGGAGAATGTCGGGGCCATCAAGTACCGAATCTGCATTCTGAATCCTGGGCCTGAGTCGTTACACACGATGAATAAAAATCAATCAAAATTTGTGAGATGGGGAAGAGAAATATAATGAATTCATTTGAAAATGCAACTGAAAGTTTGGTTGGTGTGTGTATGTTTTTGTGCAGAACAACAGGTGGAGATCAGTTCCAGAATTTGGGGGGTGGGATCACAATGCGCCTGGAGCAAGCAATTATTCTGTCGTATTTTCTCAAGCTCGTGCAAATAGAAAACAGCAAAAGACTGACTTAACTGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTGATGGCAACTGCGGATAAACATCATCACCAACAGAAACATCACCTTCATCGCCATCGCCACCACCATGAACACCAACACCAACATCGCCACCGTCACCACCATCAACCACCAGCAGATGACTCTGTTGTCCCAGTAAGCACTTTCATTTTTTCTTTTTAGTACAAATAAGTGGAAATGAGTACTTGCCAATTACGAGCTATTCTCACTTTGGCCTGCATCGGTTATTCTTTTCCCACTTTAATCTCAAAATTAGATCTTCAACTGGCTTTTTTTTTTTTTTGAGATAACCTTTCTGACCCTATAACATTTTGGTGCCAAAAAAATCTTTCAGAATATTAAATCTTAAGTAGGTGTGACCACAGATTGAACTCATTCTCTCTAAGTCTCTTAACAAAACCATGGTCATCTTCGACGGGCTAATCCAAACTCTGAACTTAATGAAGCAAACCTAGATTCAACAAGAAGTAAATGTAATATTTGAAAACAGAAGCCGAAGAAAATTTGAATAGAACATAGTACCTGTTGGATTCTGAGGCTGAGGAACAGTTGCTGAATATATCCCTTAACGGAGGGTTATTTTTATACTATACATGGTGGTGGCAACTTCATTTAAAGCCTTCTGTGAAGCTACCTTCCAGTAATTAGAGCTTTTCCCCAAGTTTAACCACAGCTACAACTTTAAAAATAATGCACAATTATCTAACAAATAAGACTACAGTTCTTACAAAGGTAGCGTCTTGTTCCAGCATACAATGAACATAAGGATATTTGTGATAGAATTTATAATAGCAGGCTATCTAACAATCGTTTCGATTCTGATAGTAAAATAGATAACGTAGTACGTATAAGAAACATGAGTGATTACATCTTAACCATTTTTTCGAAAATTAAAAGAATATAAATATTGCACATTTAATCCTTGCTCCTTTATTTTTCTCTTATCCAGCAGAAGCAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGATATGAGACAGAAGCCAATCTACTCCTCTATGTTTTAGTCATATCATGCTGTTTTTCT

mRNA sequence

TTTTCCTTCTTCTTCTCTGACCAGCTCCGAAGAGTCCACTGCAAGCAGCTTCGATCGACTTCTTCTCCTGTCTCTCGTTTGGGTTTGTGATGTAAAACGAGATTGAGCACCAGAGAACAAGAGAGCTCGAGAACAAGAGAACGAGAGTGCGAGACCGCGAGAAAGAGAGGAATTCAACAAAGAGGAAGAGAGAGCCAAGAGCGAGAACAAAGGCCAACCAACATCTTCTTACCTCCCCCTCTCCTCTGGAGACCTTATGGATCCTCGGACGGAGAACAACAGGTGGAGATCAGTTCCAGAATTTGGGGGGTGGGATCACAATGCGCCTGGAGCAAGCAATTATTCTGTCGTATTTTCTCAAGCTCGTGCAAATAGAAAACAGCAAAAGACTGACTTAACTGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTGATGGCAACTGCGGATAAACATCATCACCAACAGAAACATCACCTTCATCGCCATCGCCACCACCATGAACACCAACACCAACATCGCCACCGTCACCACCATCAACCACCAGCAGATGACTCTGTTGTCCCACAGAAGCAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGATATGAGACAGAAGCCAATCTACTCCTCTATGTTTTAGTCATATCATGCTGTTTTTCT

Coding sequence (CDS)

ATGGATCCTCGGACGGAGAACAACAGGTGGAGATCAGTTCCAGAATTTGGGGGGTGGGATCACAATGCGCCTGGAGCAAGCAATTATTCTGTCGTATTTTCTCAAGCTCGTGCAAATAGAAAACAGCAAAAGACTGACTTAACTGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTGATGGCAACTGCGGATAAACATCATCACCAACAGAAACATCACCTTCATCGCCATCGCCACCACCATGAACACCAACACCAACATCGCCACCGTCACCACCATCAACCACCAGCAGATGACTCTGTTGTCCCACAGAAGCAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGA

Protein sequence

MDPRTENNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMATADKHHHQQKHHLHRHRHHHEHQHQHRHRHHHQPPADDSVVPQKQKKILTYINCCIRP
Homology
BLAST of Lsi10G011000 vs. ExPASy TrEMBL
Match: A0A0A0KK09 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G430670 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.9e-43
Identity = 99/133 (74.44%), Postives = 106/133 (79.70%), Query Frame = 0

Query: 1   MDPRTENNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERE 60
           M  R ENNRWRSVPEFGGWDHNAPGASNYSVVF+QARA+RKQQKTDLTEFK+TSLGNE+E
Sbjct: 1   MAARKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKKTSLGNEKE 60

Query: 61  LMATADKHHHQQK--HHLHRHRHHHEHQH---------QHRHRHHHQ-PPADDSVVPQKQ 120
           LM   DKHH  QK  HH HRHRHHH H H          H H+HHHQ PP DDSV P+K+
Sbjct: 61  LMEAVDKHHRHQKHRHHRHRHRHHHHHHHDHDHDHEHQHHHHQHHHQSPPGDDSVGPEKK 120

Query: 121 KKILTYINCCIRP 122
           KKILTYINCCIRP
Sbjct: 121 KKILTYINCCIRP 133

BLAST of Lsi10G011000 vs. ExPASy TrEMBL
Match: A0A6J1JEB9 (dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-33
Identity = 84/121 (69.42%), Postives = 97/121 (80.17%), Query Frame = 0

Query: 1   MDPRTENNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERE 60
           MD RTE NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+E
Sbjct: 1   MDSRTE-NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKE 60

Query: 61  LMATADKHHHQQKHHLHRHRHHHEHQHQHRHRHHHQPPADDSVVPQKQKKILTYINCCIR 120
           LMA ADKH    +HH HR  H H+H H   H HH Q PAD +VV QK+KKIL+ ++CCI+
Sbjct: 61  LMAIADKHDRHHQHH-HRREHRHQHHHHRHHPHHGQLPADGAVVGQKKKKILSCMSCCIK 119

Query: 121 P 122
           P
Sbjct: 121 P 119

BLAST of Lsi10G011000 vs. ExPASy TrEMBL
Match: A0A6J1FT95 (dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448272 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-33
Identity = 85/123 (69.11%), Postives = 98/123 (79.67%), Query Frame = 0

Query: 1   MDPRTENNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERE 60
           MD RTE NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+E
Sbjct: 1   MDSRTE-NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKE 60

Query: 61  LMATADKHHHQQKHHLHRHRHHH--EHQHQHRHRHHHQPPADDSVVPQKQKKILTYINCC 120
           LMA ADKH    +HH HRHRH H  +H HQ  H HH Q P   +VV QK+KKIL+ ++CC
Sbjct: 61  LMAIADKH---DRHHQHRHRHEHRQQHHHQRHHPHHGQLPVGGAVVGQKKKKILSCMSCC 119

Query: 121 IRP 122
           I+P
Sbjct: 121 IKP 119

BLAST of Lsi10G011000 vs. ExPASy TrEMBL
Match: A0A6J1JCC4 (dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.0e-31
Identity = 83/121 (68.60%), Postives = 96/121 (79.34%), Query Frame = 0

Query: 1   MDPRTENNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERE 60
           MD RTE NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+E
Sbjct: 1   MDSRTE-NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKE 60

Query: 61  LMATADKHHHQQKHHLHRHRHHHEHQHQHRHRHHHQPPADDSVVPQKQKKILTYINCCIR 120
           LMA ADKH    +HH HR  H H+H H   H HH Q PAD +VV  K+KKIL+ ++CCI+
Sbjct: 61  LMAIADKHDRHHQHH-HRREHRHQHHHHRHHPHHGQLPADGAVV-GKKKKILSCMSCCIK 118

Query: 121 P 122
           P
Sbjct: 121 P 118

BLAST of Lsi10G011000 vs. ExPASy TrEMBL
Match: A0A6J1FX29 (dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448272 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.0e-31
Identity = 84/123 (68.29%), Postives = 97/123 (78.86%), Query Frame = 0

Query: 1   MDPRTENNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERE 60
           MD RTE NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+E
Sbjct: 1   MDSRTE-NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKE 60

Query: 61  LMATADKHHHQQKHHLHRHRHHH--EHQHQHRHRHHHQPPADDSVVPQKQKKILTYINCC 120
           LMA ADKH    +HH HRHRH H  +H HQ  H HH Q P   +VV  K+KKIL+ ++CC
Sbjct: 61  LMAIADKH---DRHHQHRHRHEHRQQHHHQRHHPHHGQLPVGGAVV-GKKKKILSCMSCC 118

Query: 121 IRP 122
           I+P
Sbjct: 121 IKP 118

BLAST of Lsi10G011000 vs. NCBI nr
Match: XP_038901151.1 (lateral signaling target protein 2 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 196.4 bits (498), Expect = 1.4e-46
Identity = 105/127 (82.68%), Postives = 110/127 (86.61%), Query Frame = 0

Query: 1   MDPRTENNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERE 60
           M  RTE NRWRSVPEFGGWDHNAPGASNYSVVF+QARA+RKQ+KTDLTEFKRTSLGNERE
Sbjct: 1   MAARTEKNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQRKTDLTEFKRTSLGNERE 60

Query: 61  LMATADKHHHQQKHHLHRHRHHHE--HQHQHRHRHH----HQPPADDSVVPQKQKKILTY 120
           LMA   K H  QKHH HRH HHHE  HQHQH+HRHH    HQPPADDSVVPQK+KKILTY
Sbjct: 61  LMAATGKCHRHQKHHHHRHHHHHEQQHQHQHQHRHHHHHRHQPPADDSVVPQKKKKILTY 120

Query: 121 INCCIRP 122
           INCCIRP
Sbjct: 121 INCCIRP 127

BLAST of Lsi10G011000 vs. NCBI nr
Match: XP_038901152.1 (lateral signaling target protein 2 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 190.3 bits (482), Expect = 9.9e-45
Identity = 104/127 (81.89%), Postives = 109/127 (85.83%), Query Frame = 0

Query: 1   MDPRTENNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERE 60
           M  RTE NRWRSVPEFGGWDHNAPGASNYSVVF+QARA+RKQ+KTDLTEFKRTSLGNERE
Sbjct: 1   MAARTEKNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQRKTDLTEFKRTSLGNERE 60

Query: 61  LMATADKHHHQQKHHLHRHRHHHE--HQHQHRHRHH----HQPPADDSVVPQKQKKILTY 120
           LMA   K H  QKHH HRH HHHE  HQHQH+HRHH    HQPPADDSVVP K+KKILTY
Sbjct: 61  LMAATGKCHRHQKHHHHRHHHHHEQQHQHQHQHRHHHHHRHQPPADDSVVP-KKKKILTY 120

Query: 121 INCCIRP 122
           INCCIRP
Sbjct: 121 INCCIRP 126

BLAST of Lsi10G011000 vs. NCBI nr
Match: KAG6605945.1 (hypothetical protein SDJN03_03262, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035891.1 hypothetical protein SDJN02_02690, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 167.5 bits (423), Expect = 6.9e-38
Identity = 93/126 (73.81%), Postives = 102/126 (80.95%), Query Frame = 0

Query: 1   MDPRTE-NNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNER 60
           MD R E NNRW+SVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKR SLGNER
Sbjct: 1   MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNER 60

Query: 61  ELMATADKHHHQQKHHLHRHR----HHHEHQHQHRHRHHHQPPADDSVVPQKQKKILTYI 120
           E+MA ADKH  QQ HH HRH     HH  ++H  +++H  +P   D VVPQK+KKILTYI
Sbjct: 61  EMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILTYI 120

Query: 121 NCCIRP 122
           NCCIRP
Sbjct: 121 NCCIRP 126

BLAST of Lsi10G011000 vs. NCBI nr
Match: XP_023512837.1 (dendritic arbor reduction protein 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 157.5 bits (397), Expect = 7.1e-35
Identity = 87/123 (70.73%), Postives = 100/123 (81.30%), Query Frame = 0

Query: 1   MDPRTENNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERE 60
           MD RTE NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+E
Sbjct: 1   MDSRTE-NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKE 60

Query: 61  LMATADKHHHQQKHHLHRHRHHHEHQHQHR--HRHHHQPPADDSVVPQKQKKILTYINCC 120
           LMA ADKH    +HH HRHRH H HQH H+  H HH Q P D +VV QK+KKIL+ ++CC
Sbjct: 61  LMAIADKH---DRHHQHRHRHEHRHQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCC 119

Query: 121 IRP 122
           I+P
Sbjct: 121 IKP 119

BLAST of Lsi10G011000 vs. NCBI nr
Match: KAG6570425.1 (hypothetical protein SDJN03_29340, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010301.1 hypothetical protein SDJN02_27094 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.8 bits (390), Expect = 4.6e-34
Identity = 86/123 (69.92%), Postives = 99/123 (80.49%), Query Frame = 0

Query: 1   MDPRTENNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERE 60
           MD RTE NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+E
Sbjct: 1   MDSRTE-NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKE 60

Query: 61  LMATADKHHHQQKHHLHRHRHHH--EHQHQHRHRHHHQPPADDSVVPQKQKKILTYINCC 120
           LMA ADKH    +HH HRHRH H  +H HQ  H HH Q P D +VV QK+KKIL+ ++CC
Sbjct: 61  LMAIADKH---DRHHQHRHRHEHRQQHHHQRHHPHHGQLPVDGAVVGQKKKKILSCMSCC 119

Query: 121 IRP 122
           I+P
Sbjct: 121 IKP 119

BLAST of Lsi10G011000 vs. TAIR 10
Match: AT5G19473.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 94.7 bits (234), Expect = 5.3e-20
Identity = 59/122 (48.36%), Postives = 74/122 (60.66%), Query Frame = 0

Query: 1   MDPRTENNRWRSVPEFGGWDHNAPG-ASNYSVVFSQARANRKQQKTDLTEFKRTSLGNER 60
           MD R EN  W  VP+FGGWD   P  A+NYSVVFS+ARANRKQ K  +   + +SLG+E+
Sbjct: 1   MDKRRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGV---RHSSLGSEQ 60

Query: 61  ELMATADKHHHQQKHHLHRHRHHHEHQHQHRHRHHHQPPADDSVVPQKQKKILTYINCCI 120
           ELM +  + +HQQ H                  H H+   DD V+  K+K+ILTYINCCI
Sbjct: 61  ELMVSV-RRNHQQLH------------------HRHETQDDDPVM--KKKRILTYINCCI 98

Query: 121 RP 122
           RP
Sbjct: 121 RP 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KK095.9e-4374.44AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G43... [more]
A0A6J1JEB91.4e-3369.42dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1FT951.4e-3369.11dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1JCC41.0e-3168.60dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1FX291.0e-3168.29dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=... [more]
Match NameE-valueIdentityDescription
XP_038901151.11.4e-4682.68lateral signaling target protein 2 homolog isoform X1 [Benincasa hispida][more]
XP_038901152.19.9e-4581.89lateral signaling target protein 2 homolog isoform X2 [Benincasa hispida][more]
KAG6605945.16.9e-3873.81hypothetical protein SDJN03_03262, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023512837.17.1e-3570.73dendritic arbor reduction protein 1 isoform X1 [Cucurbita pepo subsp. pepo][more]
KAG6570425.14.6e-3469.92hypothetical protein SDJN03_29340, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT5G19473.15.3e-2048.36RPM1-interacting protein 4 (RIN4) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 9..41
e-value: 1.7E-8
score: 33.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..94
NoneNo IPR availablePANTHERPTHR33882:SF11RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEINcoord: 1..120
NoneNo IPR availablePANTHERPTHR33882PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEINcoord: 1..120

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G011000.1Lsi10G011000.1mRNA