Homology
BLAST of Lsi10G010840 vs. ExPASy Swiss-Prot
Match:
O04659 (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E14 PE=2 SV=2)
HSP 1 Score: 777.3 bits (2006), Expect = 1.4e-223
Identity = 371/691 (53.69%), Postives = 514/691 (74.38%), Query Frame = 0
Query: 1 MDYMTLLSALKTCA-SSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAEL 60
M+ LLS L+ C S+K L++ KL+HQ+I +LG + ++ LCK+LI YF+C D+ SA
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 61 VFQTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGL 120
VF+ D DV +WN+L+S +KN F + L++F +L S PD +T+P V+KA G L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 121 GRVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVI 180
GR GR IH ++K+G + DV V SS++ MYAK + F +++ +FDE P+RDV WNTVI
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 181 SCYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTL 240
SC+++ +AE AL++F +M+ GFEPNSV+ TVA+S+C+RLL LERGKEI R+ + +G
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 241 LDAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRM 300
LD +V SALVDMYGKC CLE+A+EVF+++PRK+ + WN+MI GY KGDS+SC+E+L RM
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 301 NDEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYV 360
EG++P+ TTLTSI+ A SRS +L HGKFIHGY++R+ ++ DI+++ SLID YFKCG
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 361 SSAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPAC 420
+ AET+F K+ SWNVMIS Y+ +GN A+ YD M VKPD VTF+S LPAC
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 421 SQLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWT 480
SQLAAL+KG+++H I +LE++++++ ALLDMY+KCG+ EA ++F+ +PK+D+VSWT
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWT 480
Query: 481 SMIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQ 540
MI+AYGSHGQ EAL FDEMQK ++ D VT LAVLSAC HAGL+DEG K+F++M +
Sbjct: 481 VMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSK 540
Query: 541 YDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGI 600
Y I+P IEHYSC+ID+LGRAGRL EAYEI+Q++ ET ++ LLSTLFSAC LH + LG
Sbjct: 541 YGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGD 600
Query: 601 QIGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRI 660
+I ++L+E PDD STY++L N+YAS W+ +VR KM+E+GL+K PGCSWIE++ ++
Sbjct: 601 RIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKV 660
Query: 661 HPFFVEDKSNPLADGVYECLNILACHMEKNE 691
FF ED+S+ A+ VYECL +L+ HME +
Sbjct: 661 CHFFAEDRSHLRAENVYECLALLSGHMESGQ 691
BLAST of Lsi10G010840 vs. ExPASy Swiss-Prot
Match:
Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)
HSP 1 Score: 456.8 bits (1174), Expect = 4.3e-127
Identity = 238/688 (34.59%), Postives = 400/688 (58.14%), Query Frame = 0
Query: 2 DYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVF 61
D T S +K CA + G L++++I +GF+S++ + L+ Y A VF
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 62 QTNDSPL-DVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLG 121
++ P+ D+ WN+L+S + + + EAL+++H+L +S++ PD +T VL A G L
Sbjct: 165 --DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK-NSWIVPDSFTVSSVLPAFGNLL 224
Query: 122 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 181
V G+ +H +K+G+ V V + ++ MY K + DA +FDE RD +NT+I
Sbjct: 225 VVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMIC 284
Query: 182 CYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLL 241
Y K + E +++MF + + F+P+ +T + + +C L +L K I ++ G +L
Sbjct: 285 GYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 344
Query: 242 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMN 301
++ V + L+D+Y KCG + A++VF + K+T++WN++I+GY GD ++L M
Sbjct: 345 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 404
Query: 302 DEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 361
+ T +I S+R L+ GK +H +++ I +D+ + +LID Y KCG V
Sbjct: 405 IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 464
Query: 362 SAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACS 421
+ IF S+ + V+WN +IS V G+ L+ M++ V PD TF TLP C+
Sbjct: 465 DSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 524
Query: 422 QLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 481
LAA G+E+H C++ ES + AL++MY+KCG ++ + ++F ++ +RD+V+WT
Sbjct: 525 SLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTG 584
Query: 482 MIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQY 541
MI AYG +G+ +AL F +M+KS + DSV F+A++ ACSH+GLVDEG F +M Y
Sbjct: 585 MIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHY 644
Query: 542 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQ 601
I P IEHY+C++DLL R+ ++ +A E +Q + + D + +++ ACR D +
Sbjct: 645 KIDPMIEHYACVVDLLSRSQKISKAEEFIQ-AMPIKPDASIWASVLRACRTSGDMETAER 704
Query: 602 IGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIH 661
+ + +IE++PDDP IL SN YA++ KW++V +R+ +++ + KNPG SWIE+ + +H
Sbjct: 705 VSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVH 764
Query: 662 PFFVEDKSNPLADGVYECLNILACHMEK 689
F D S P ++ +Y+ L IL M K
Sbjct: 765 VFSSGDDSAPQSEAIYKSLEILYSLMAK 787
BLAST of Lsi10G010840 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 451.1 bits (1159), Expect = 2.3e-125
Identity = 240/689 (34.83%), Postives = 392/689 (56.89%), Query Frame = 0
Query: 1 MDYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELV 60
+D TL S L+ CA SK LK GK + I GF + L L Y +C D + A V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 61 FQTNDSPLDVSL-WNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGL 120
F ++ ++ +L WN L++ K+ F ++ LF ++ S V D YT+ V K+ L
Sbjct: 152 F--DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSSL 211
Query: 121 GRVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVI 180
V G ++H ++K+G VG+S++ Y K + A +FDE +RDV WN++I
Sbjct: 212 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 271
Query: 181 SCYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTL 240
+ Y + AE L +F +M G E + T + C + G+ + +
Sbjct: 272 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 331
Query: 241 LDAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRM 300
+ + L+DMY KCG L+ AK VF ++ ++ +++ +MI GY+ +G + ++L M
Sbjct: 332 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 391
Query: 301 NDEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYV 360
+EG P + T+T+++ +R L GK +H +I N + DIF+ +L+D Y KCG +
Sbjct: 392 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 451
Query: 361 SSAETIFRSISKNEVVSWNVMISGYV--MLGNHILALRTYDNMKEHHVKPDAVTFSSTLP 420
AE +F + +++SWN +I GY N L+L ++E PD T + LP
Sbjct: 452 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL-LLEEKRFSPDERTVACVLP 511
Query: 421 ACSQLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVS 480
AC+ L+A DKGRE+H I+ + S++ V +L+DMYAKCG + A LF + +DLVS
Sbjct: 512 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 571
Query: 481 WTSMIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMI 540
WT MIA YG HG EA+ LF++M+++ ++AD ++F+++L ACSH+GLVDEG+++FN M
Sbjct: 572 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 631
Query: 541 IQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVL 600
+ I+P +EHY+C++D+L R G L +AY ++ + D + L CR+H+D L
Sbjct: 632 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIE-NMPIPPDATIWGALLCGCRIHHDVKL 691
Query: 601 GIQIGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQ 660
++ + + E++P++ Y+L++N+YA KWE+V ++R+++ + GL+KNPGCSWIEI
Sbjct: 692 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 751
Query: 661 RIHPFFVEDKSNPLADGVYECLNILACHM 687
R++ F D SNP + + L + M
Sbjct: 752 RVNIFVAGDSSNPETENIEAFLRKVRARM 775
BLAST of Lsi10G010840 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 439.1 bits (1128), Expect = 9.2e-122
Identity = 231/679 (34.02%), Postives = 376/679 (55.38%), Query Frame = 0
Query: 10 LKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQTNDSPLD 69
L+ C+S K L+Q + +F G L+ + A VF+ DS L+
Sbjct: 44 LERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 103
Query: 70 VSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVVYGRRIH 129
V L++ +L K +ALQ F ++ + V P Y + +LK CG + G+ IH
Sbjct: 104 V-LYHTMLKGFAKVSDLDKALQFFVRMR-YDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 163
Query: 130 NHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYFKDDKAE 189
L+K+G D+F + + NMYAKC Q ++A +FD P+RD+ WNT+++ Y ++ A
Sbjct: 164 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 223
Query: 190 TALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAFVLSALV 249
AL+M M E +P+ +T + + + L + GKEI + G + +ALV
Sbjct: 224 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 283
Query: 250 DMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEGSKPTLT 309
DMY KCG LE A+++F+ + +N ++WN+MI Y + + + + +M DEG KPT
Sbjct: 284 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 343
Query: 310 TLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRSI 369
++ ++A + L G+FIH + +D ++ + SLI Y KC V +A ++F +
Sbjct: 344 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 403
Query: 370 SKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACSQLAALDKGR 429
+VSWN MI G+ G I AL + M+ VKPD T+ S + A ++L+ +
Sbjct: 404 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 463
Query: 430 ELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIAAYGSHG 489
+H ++ L+ N V AL+DMYAKCG + AR +F + +R + +W +MI YG+HG
Sbjct: 464 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 523
Query: 490 QASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIKPGIEHY 549
AL LF+EMQK ++ + VTFL+V+SACSH+GLV+ G K F M Y I+ ++HY
Sbjct: 524 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 583
Query: 550 SCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGKMLIEID 609
++DLLGRAGRL+EA++ + + + + + + AC++H + + + L E++
Sbjct: 584 GAMVDLLGRAGRLNEAWDFIMQ-MPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELN 643
Query: 610 PDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIHPFFVEDKSN 669
PDD ++LL+N+Y + + WE+V +VR M GL+K PGCS +EI +H FF ++
Sbjct: 644 PDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAH 703
Query: 670 PLADGVYECLNILACHMEK 689
P + +Y L L CH+++
Sbjct: 704 PDSKKIYAFLEKLICHIKE 716
BLAST of Lsi10G010840 vs. ExPASy Swiss-Prot
Match:
Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)
HSP 1 Score: 435.6 bits (1119), Expect = 1.0e-120
Identity = 254/722 (35.18%), Postives = 383/722 (53.05%), Query Frame = 0
Query: 17 KLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFS--CHDYRSAELVFQTNDSPLDVSLWN 76
K + Q KL+HQK+ S G + + L LI Y S C + + L+ + S V WN
Sbjct: 39 KTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSH-AVSLLRRFPPSDAGVYHWN 98
Query: 77 ALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVVYGRRIHNHLIK 136
+L+ + N + L LF ++ S+ PD YT+P V KACG + V G H +
Sbjct: 99 SLIRSYGDNGCANKCLYLFGLMHSLSWT-PDNYTFPFVFKACGEISSVRCGESAHALSLV 158
Query: 137 TGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYFKDDKAETALKM 196
TG I +VFVG++++ MY++C DA +FDE DV WN++I Y K K + AL+M
Sbjct: 159 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 218
Query: 197 FDKM-KELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAFVLSALVDMYG 256
F +M E G P+++T + C L GK++ + + + FV + LVDMY
Sbjct: 219 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 278
Query: 257 KCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDE----------- 316
KCG ++ A VF + K+ ++WNAM+ GYS G + L +M +E
Sbjct: 279 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 338
Query: 317 ------------------------GSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNR 376
G KP TL S++ + L HGK IH Y ++
Sbjct: 339 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 398
Query: 377 IDV-------DIFIDVSLIDFYFKCGYVSSAETIFRSISKNE--VVSWNVMISGYVMLGN 436
ID+ + + LID Y KC V +A +F S+S E VV+W VMI GY G+
Sbjct: 399 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 458
Query: 437 HILALRTYDNMKEH--HVKPDAVTFSSTLPACSQLAALDKGRELHHCIISHKLESNKI-V 496
AL M E +P+A T S L AC+ LAAL G+++H + ++ + + V
Sbjct: 459 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 518
Query: 497 MGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIAAYGSHGQASEALRLFDEMQKSNV 556
L+DMYAKCG + +AR +F + ++ V+WTS++ YG HG EAL +FDEM++
Sbjct: 519 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 578
Query: 557 QADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIKPGIEHYSCLIDLLGRAGRLHEAY 616
+ D VT L VL ACSH+G++D+G +YFN M + + PG EHY+CL+DLLGRAGRL+ A
Sbjct: 579 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 638
Query: 617 EILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGKMLIEIDPDDPSTYILLSNMYASV 676
+++ + ++ L S CR+H LG + + E+ + +Y LLSN+YA+
Sbjct: 639 RLIEEMPMEPPPVVWVAFL-SCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 698
Query: 677 NKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIHPFFVEDKSNPLADGVYECLNILACHM 689
+W++V ++R MR G+KK PGCSW+E + FFV DK++P A +Y+ +L HM
Sbjct: 699 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQ---VLLDHM 753
BLAST of Lsi10G010840 vs. ExPASy TrEMBL
Match:
A0A5D3BAG7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00800 PE=4 SV=1)
HSP 1 Score: 1307.7 bits (3383), Expect = 0.0e+00
Identity = 630/693 (90.91%), Postives = 666/693 (96.10%), Query Frame = 0
Query: 1 MDYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELV 60
MDY+TLLSAL+TC SSKLLKQGKL+HQ+IFS GFQSNI LCK+LIGFYFSCHDY SAELV
Sbjct: 1 MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNILLCKSLIGFYFSCHDYASAELV 60
Query: 61 FQTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLG 120
FQTN+ PLDVSLWN+LLSA T NFRFVEALQLF QLNC+S+VRPD YTYPVVLKACGGLG
Sbjct: 61 FQTNECPLDVSLWNSLLSAYTNNFRFVEALQLFDQLNCNSHVRPDFYTYPVVLKACGGLG 120
Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 180
RV+YGRRIHNHL+KTGLIWDVFVGSS+MNMYAKCDQF DAI LFDEFPQRDVGCWN VIS
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180
Query: 181 CYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLL 240
CYFKD KAETALK FDKMKELGFEPNSVTFTV VSSCTRLLNL+RGKEI RELIDR LL
Sbjct: 181 CYFKDGKAETALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLKRGKEIHRELIDRRILL 240
Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMN 300
DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKN ITWNAMITGYSLKGDSRSCIELLMRMN
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAITWNAMITGYSLKGDSRSCIELLMRMN 300
Query: 301 DEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
DEG+KPTLTTLTSI+YASSRSV LRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS
Sbjct: 301 DEGTKPTLTTLTSIVYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
Query: 361 SAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACS 420
SAETIFRSISKNEVVSWNVM+SGYVM+GNHI ALR YDNMKEHHVKPDA+TFSSTL ACS
Sbjct: 361 SAETIFRSISKNEVVSWNVMVSGYVMVGNHIQALRIYDNMKEHHVKPDALTFSSTLSACS 420
Query: 421 QLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
QLAALDKGRELH+CII+HKLE+N+IVMGALLDMYAKCGDVDEA+KLFHQLPKRDLVSWTS
Sbjct: 421 QLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEAQKLFHQLPKRDLVSWTS 480
Query: 481 MIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQY 540
MI+AYGSHGQASEALRLFDEMQKSNV+ADSV FLAVLSACSHAGLVDEGY YFNEMI+QY
Sbjct: 481 MISAYGSHGQASEALRLFDEMQKSNVRADSVAFLAVLSACSHAGLVDEGYTYFNEMIVQY 540
Query: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQ 600
DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKET++DIGLLSTLFSACRLHNDFVLGIQ
Sbjct: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETKSDIGLLSTLFSACRLHNDFVLGIQ 600
Query: 601 IGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIH 660
IGKMLIE+DP+DPSTYILLSNMYASVNKW+EV KVRRKM+E+GLKK+PGCSWIEINQ+IH
Sbjct: 601 IGKMLIEVDPNDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQKIH 660
Query: 661 PFFVEDKSNPLADGVYECLNILACHMEKNELEL 694
PFFVEDKSNP ADGVYECLNILACHMEKNE+EL
Sbjct: 661 PFFVEDKSNPSADGVYECLNILACHMEKNEVEL 693
BLAST of Lsi10G010840 vs. ExPASy TrEMBL
Match:
A0A0A0KK21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432790 PE=4 SV=1)
HSP 1 Score: 1297.7 bits (3357), Expect = 0.0e+00
Identity = 628/693 (90.62%), Postives = 659/693 (95.09%), Query Frame = 0
Query: 1 MDYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELV 60
MDY+TLLSAL+TC SSKLLKQGKL+HQ+IFS GFQSNI L K+LIGFYFSCHDY SAELV
Sbjct: 1 MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60
Query: 61 FQTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLG 120
FQTND PLDVSLWNALLSA T NFRFVEALQLF QLNC+SYVRPD YTYPVVLKACGGLG
Sbjct: 61 FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120
Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 180
RV+YGRRIHNHL+KTGLIWDVFVGSS+MNMYAKCDQF DAI LFDEFPQRDVGCWN VIS
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180
Query: 181 CYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLL 240
CYFKD KAE ALK FDKMKELGFEPNSVTFTV VSSCTRLLNLERGKE+ RELI+R LL
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILL 240
Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMN 300
DAFVLSALVDMYGKCGCLEMAKEVFE+IPRKN ITWNAMITGYSLKGDSRSCIELLMRMN
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMN 300
Query: 301 DEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
DEG+KPTL TLTSIIYASSRSV LRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS
Sbjct: 301 DEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
Query: 361 SAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACS 420
SAETIFR+ISKNEVVSWNVMISG+VM+GNHI AL YDNMKEHHVKPDA+TFSSTL ACS
Sbjct: 361 SAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACS 420
Query: 421 QLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
QLAALDKGRELH+CII+HKLE+N+IVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS
Sbjct: 421 QLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
Query: 481 MIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQY 540
MI AYGSHGQASEALRLFDEMQK NV+ADSVTFLAVLSACSHAGLVDEGY YFNEM++QY
Sbjct: 481 MIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQY 540
Query: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQ 600
DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETR+DIGLLSTLFSAC LHN+FVLGIQ
Sbjct: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQ 600
Query: 601 IGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIH 660
IGKMLIE+DPDDPSTYILLSNMYASVNKW+EV KVRRKM+E+GLKK+PGCSWIEINQRIH
Sbjct: 601 IGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIH 660
Query: 661 PFFVEDKSNPLADGVYECLNILACHMEKNELEL 694
PFF EDKSNPLADGVYECLNIL CHMEKNELEL
Sbjct: 661 PFFAEDKSNPLADGVYECLNILGCHMEKNELEL 693
BLAST of Lsi10G010840 vs. ExPASy TrEMBL
Match:
A0A6J1FXU4 (pentatricopeptide repeat-containing protein At5g27110 OS=Cucurbita moschata OX=3662 GN=LOC111448220 PE=4 SV=1)
HSP 1 Score: 1282.7 bits (3318), Expect = 0.0e+00
Identity = 618/693 (89.18%), Postives = 653/693 (94.23%), Query Frame = 0
Query: 1 MDYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELV 60
MDYMTLLSAL+TCASSKLLKQGKL+HQ+IF GFQSN+ LCK LIGFYFSC+DYRSAELV
Sbjct: 1 MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELV 60
Query: 61 FQTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLG 120
FQTND PLDVSLWNALLSA TK+ RFVEALQLF QL HS+VRPDCYTYPVVLKACGGLG
Sbjct: 61 FQTNDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 120
Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 180
RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDA++LFDE PQRDVGCWN VIS
Sbjct: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVDLFDEIPQRDVGCWNAVIS 180
Query: 181 CYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLL 240
CYF+DDK E ALKMFDKMKELGFEPNSVTFTV VSSC RLLNLERGKEI RELIDR LL
Sbjct: 181 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 240
Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMN 300
DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKN +TWN+MITGYSLKGDSRSCIELLMRMN
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMN 300
Query: 301 DEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
EG++PTLTTLTSIIYASSRSV LRHGKFIHGYILRNRIDVDIFIDVSLID YFKCG VS
Sbjct: 301 YEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVS 360
Query: 361 SAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACS 420
SAET+FR++SKN+VVSWNVMISGYVM+GNHI ALR YDNMKEHHVKPDAVTFSSTL ACS
Sbjct: 361 SAETVFRNVSKNDVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACS 420
Query: 421 QLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
QLAALDKGRELHHCIISHKLESN+IVMGALLDMYAKCGDV+EARKLFHQLP+RDLVSWTS
Sbjct: 421 QLAALDKGRELHHCIISHKLESNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTS 480
Query: 481 MIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQY 540
MI AYGSHGQASEALRLFDEM+KSNV+ADSVTFLAVLSACSHAGLVDEGY YFNEMI QY
Sbjct: 481 MITAYGSHGQASEALRLFDEMKKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQY 540
Query: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQ 600
DI+PGIEHYSCLIDLLGRAGRLHEAYEIL+RS+ETRND GLLSTLFSACRLHNDF LGIQ
Sbjct: 541 DIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQ 600
Query: 601 IGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIH 660
IGK+L+E+ PDDPSTYILLSNMYASVNKWEEV VRRKM+E+GLKK PGCSWIEINQRI
Sbjct: 601 IGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQ 660
Query: 661 PFFVEDKSNPLADGVYECLNILACHMEKNELEL 694
PFFVEDKSNP+ DGVYECL+ L CHMEKNELE+
Sbjct: 661 PFFVEDKSNPVVDGVYECLSTLGCHMEKNELEV 693
BLAST of Lsi10G010840 vs. ExPASy TrEMBL
Match:
A0A6J1JHK4 (pentatricopeptide repeat-containing protein At5g27110 OS=Cucurbita maxima OX=3661 GN=LOC111484569 PE=4 SV=1)
HSP 1 Score: 1282.3 bits (3317), Expect = 0.0e+00
Identity = 619/694 (89.19%), Postives = 653/694 (94.09%), Query Frame = 0
Query: 1 MDYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELV 60
MDYMTLLSAL+TCASSKLLKQGKL+HQ+IF GFQSN+ LCK LIGFYFSC+DYRSAELV
Sbjct: 1 MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNLTLCKALIGFYFSCYDYRSAELV 60
Query: 61 FQTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLG 120
FQTND PLDVSLWNALLSA TK+FRFVEALQLF QL HS+VRPDCYTYPVVLKACGGLG
Sbjct: 61 FQTNDCPLDVSLWNALLSAYTKSFRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 120
Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 180
RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDA+NLFDEFPQRDVGCWN VIS
Sbjct: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVNLFDEFPQRDVGCWNAVIS 180
Query: 181 CYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLL 240
CYF+DDK E ALKMFDKMKELGFEPNSVTFTV VSSC RLLNLERGKEI RELIDR LL
Sbjct: 181 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 240
Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMN 300
D FVLSALVDMYGKCGCLEMAKEVFEQIPRKN +TWN+MITGYSLKGDSRSCIELLMRM+
Sbjct: 241 DDFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMS 300
Query: 301 DEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
EG++PTLTTLTSIIYASSRSV LRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCG VS
Sbjct: 301 YEGTEPTLTTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGSVS 360
Query: 361 SAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACS 420
SAET+FR++SKNEVVSWNVMISGYVM+GNHI AL YDNMKEHHVKPDAVTFSSTL ACS
Sbjct: 361 SAETVFRNVSKNEVVSWNVMISGYVMVGNHIQALCVYDNMKEHHVKPDAVTFSSTLSACS 420
Query: 421 QLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
QLAALDKGRELHHCIISHKLE N+IVMGALLDMYAKCGDV+EARKLFHQLP+RDLVSWTS
Sbjct: 421 QLAALDKGRELHHCIISHKLECNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTS 480
Query: 481 MIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQY 540
MI AYGSHGQASEALRLFD MQKSNV+ADSVTFLAVLSACSHAGLVDEGY YFNEMI QY
Sbjct: 481 MITAYGSHGQASEALRLFDAMQKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQY 540
Query: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQ 600
DI+PGIEHYSCLIDLLGRAGRLHEAYEIL+RS+ETRND GLLSTLFSACRLHNDF LG Q
Sbjct: 541 DIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGKQ 600
Query: 601 IGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIH 660
IGK+L+E+ PDDPSTYILLSNMYASVNKWEEV VRRKM+E+GLKK PGCSWIEINQRI
Sbjct: 601 IGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQ 660
Query: 661 PFFVEDKSNPLADGVYECLNILACHMEKNELELV 695
PFFVEDKSNP+ DGVYECL+ LACHMEKNELE++
Sbjct: 661 PFFVEDKSNPVVDGVYECLSTLACHMEKNELEVL 694
BLAST of Lsi10G010840 vs. ExPASy TrEMBL
Match:
A0A6J1DJC4 (pentatricopeptide repeat-containing protein At5g27110 OS=Momordica charantia OX=3673 GN=LOC111020588 PE=4 SV=1)
HSP 1 Score: 1223.0 bits (3163), Expect = 0.0e+00
Identity = 594/693 (85.71%), Postives = 639/693 (92.21%), Query Frame = 0
Query: 1 MDYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELV 60
MDY LLSAL+TCASSKLLKQGKL+HQ+IFS GFQS+I LCKTLI FY SCHDYRSAELV
Sbjct: 1 MDYTRLLSALRTCASSKLLKQGKLIHQRIFSSGFQSHIALCKTLIDFYSSCHDYRSAELV 60
Query: 61 FQTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLG 120
F+T LDVSLWNALLSA TKNF FVEALQL+ QL CHS VRPDCYTYPVVLKACGGLG
Sbjct: 61 FETTCCSLDVSLWNALLSAYTKNFMFVEALQLYDQLKCHSEVRPDCYTYPVVLKACGGLG 120
Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 180
RVV GRR+H+HLIKTGLIWDVFV SS+MNMY KC +FH AINLFDE P RDVGCWNTVIS
Sbjct: 121 RVVCGRRVHSHLIKTGLIWDVFVSSSLMNMYVKCGRFHYAINLFDEMPHRDVGCWNTVIS 180
Query: 181 CYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLL 240
CYF+DDKAETALKMFD+MK+ GFEPNSVTFT+ +SSCTRLLNLE+GKEI RELIDR LL
Sbjct: 181 CYFQDDKAETALKMFDEMKDSGFEPNSVTFTIVISSCTRLLNLEKGKEIHRELIDRRVLL 240
Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMN 300
DAFVLSALVD+YGKCGCLEMAKEVFEQIPRKN ITWN+MITGYSL GDSRSCIELL RM
Sbjct: 241 DAFVLSALVDLYGKCGCLEMAKEVFEQIPRKNAITWNSMITGYSLTGDSRSCIELLKRMT 300
Query: 301 DEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
D G+KPTLTTLTSII ASSRS RHGKFIHG+ILRN ++ DIFIDVSLID YFKCGYV
Sbjct: 301 DAGTKPTLTTLTSIISASSRSAQPRHGKFIHGFILRNGMNSDIFIDVSLIDLYFKCGYVY 360
Query: 361 SAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACS 420
SAETIFR+ISKNEVVSWNVMISGYV++GNHI ALR YDNMKEH VKPDAVTFSSTL ACS
Sbjct: 361 SAETIFRNISKNEVVSWNVMISGYVLVGNHIQALRVYDNMKEHDVKPDAVTFSSTLSACS 420
Query: 421 QLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
QLAAL+KGRELH+CIISHKLE+N+IVMGALLDM+AKCGDVDEARKLF QLP+RDLVSWT+
Sbjct: 421 QLAALEKGRELHNCIISHKLETNEIVMGALLDMFAKCGDVDEARKLFLQLPERDLVSWTT 480
Query: 481 MIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQY 540
MI AYGSHGQASEALRLFDEMQKSNV ADSVTFLAVLSACSHAGLVDEGYKYFN+MIIQY
Sbjct: 481 MITAYGSHGQASEALRLFDEMQKSNVGADSVTFLAVLSACSHAGLVDEGYKYFNKMIIQY 540
Query: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQ 600
DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRS++TRN IGLLSTLFSACRL NDFVLGI+
Sbjct: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSEDTRNHIGLLSTLFSACRLRNDFVLGIE 600
Query: 601 IGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIH 660
IGKM++E+DPDDPSTYILLSNM ASVNKWEEV KVR+KM+E+GL+K+PGCSWIEINQRI
Sbjct: 601 IGKMIMEVDPDDPSTYILLSNMCASVNKWEEVRKVRQKMKELGLRKSPGCSWIEINQRIQ 660
Query: 661 PFFVEDKSNPLADGVYECLNILACHMEKNELEL 694
PFFVEDKSNPL DGVYECL+ILA HMEKNELEL
Sbjct: 661 PFFVEDKSNPLVDGVYECLSILASHMEKNELEL 693
BLAST of Lsi10G010840 vs. NCBI nr
Match:
XP_038902098.1 (pentatricopeptide repeat-containing protein At5g27110 [Benincasa hispida])
HSP 1 Score: 1324.3 bits (3426), Expect = 0.0e+00
Identity = 645/693 (93.07%), Postives = 668/693 (96.39%), Query Frame = 0
Query: 1 MDYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELV 60
MDYM LLSAL+TCASSKLLKQGKL+HQKIFSLGFQSNI LCKTLIGFYFSCHDYRSAELV
Sbjct: 1 MDYMILLSALRTCASSKLLKQGKLIHQKIFSLGFQSNIVLCKTLIGFYFSCHDYRSAELV 60
Query: 61 FQTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLG 120
FQTN SPLDVSLWNALLSA TKNF FVEALQLF QLNCHS+VRPDCYTYPVVLKACGGLG
Sbjct: 61 FQTNGSPLDVSLWNALLSAYTKNFGFVEALQLFDQLNCHSHVRPDCYTYPVVLKACGGLG 120
Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 180
RVVYGRRIHNHLIKTGLIWDVFVGSS+MNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS
Sbjct: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSLMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 180
Query: 181 CYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLL 240
CYFKDDKAETALKMFDKMKELGFEPNSVTFTV VSSCTRLLNLERGKEI RELIDRG LL
Sbjct: 181 CYFKDDKAETALKMFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEIHRELIDRGILL 240
Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMN 300
DAFVLSALVDMYGKCG EMAKE+FEQIPRKN ITWNAMITGYSLKGDSRSCIELLMRMN
Sbjct: 241 DAFVLSALVDMYGKCGYFEMAKEIFEQIPRKNAITWNAMITGYSLKGDSRSCIELLMRMN 300
Query: 301 DEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
DEG+KPTLTTLTSII+ASSRSV LRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS
Sbjct: 301 DEGTKPTLTTLTSIIHASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
Query: 361 SAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACS 420
SAETIFR+ISKNEVVSWNVMISGYVM+GNHI ALR YDNMKEHHVKPDA+TFSSTL ACS
Sbjct: 361 SAETIFRNISKNEVVSWNVMISGYVMVGNHIQALRIYDNMKEHHVKPDAITFSSTLSACS 420
Query: 421 QLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
QLAAL+KGRELHHCIISHKLE+N+IVMGALLDMYAKCGDVD+A KLFHQLPKRDLVSWTS
Sbjct: 421 QLAALEKGRELHHCIISHKLETNEIVMGALLDMYAKCGDVDDAWKLFHQLPKRDLVSWTS 480
Query: 481 MIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQY 540
MI AYGSHGQASEALRLFDEMQKSNV+ADSVTFLAVLSACSHAGLVDEGYKYFNEMI Q
Sbjct: 481 MITAYGSHGQASEALRLFDEMQKSNVRADSVTFLAVLSACSHAGLVDEGYKYFNEMIAQ- 540
Query: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQ 600
+IK IEHYSCLIDLLGRAGRLHEAYEILQRSKETR DIGLLSTLFSACRLHNDFVLG+Q
Sbjct: 541 NIKASIEHYSCLIDLLGRAGRLHEAYEILQRSKETRKDIGLLSTLFSACRLHNDFVLGVQ 600
Query: 601 IGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIH 660
IGKMLIE+DPDDPST+ILLSNMYASVNKWEEV KVRRKM+E+GLKK+PGCSWIEINQRIH
Sbjct: 601 IGKMLIEVDPDDPSTFILLSNMYASVNKWEEVRKVRRKMKELGLKKSPGCSWIEINQRIH 660
Query: 661 PFFVEDKSNPLADGVYECLNILACHMEKNELEL 694
PFFVEDKSNPLAD VYECLNILACHMEKNEL+L
Sbjct: 661 PFFVEDKSNPLADEVYECLNILACHMEKNELKL 692
BLAST of Lsi10G010840 vs. NCBI nr
Match:
TYJ96117.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1307.7 bits (3383), Expect = 0.0e+00
Identity = 630/693 (90.91%), Postives = 666/693 (96.10%), Query Frame = 0
Query: 1 MDYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELV 60
MDY+TLLSAL+TC SSKLLKQGKL+HQ+IFS GFQSNI LCK+LIGFYFSCHDY SAELV
Sbjct: 1 MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNILLCKSLIGFYFSCHDYASAELV 60
Query: 61 FQTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLG 120
FQTN+ PLDVSLWN+LLSA T NFRFVEALQLF QLNC+S+VRPD YTYPVVLKACGGLG
Sbjct: 61 FQTNECPLDVSLWNSLLSAYTNNFRFVEALQLFDQLNCNSHVRPDFYTYPVVLKACGGLG 120
Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 180
RV+YGRRIHNHL+KTGLIWDVFVGSS+MNMYAKCDQF DAI LFDEFPQRDVGCWN VIS
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180
Query: 181 CYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLL 240
CYFKD KAETALK FDKMKELGFEPNSVTFTV VSSCTRLLNL+RGKEI RELIDR LL
Sbjct: 181 CYFKDGKAETALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLKRGKEIHRELIDRRILL 240
Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMN 300
DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKN ITWNAMITGYSLKGDSRSCIELLMRMN
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAITWNAMITGYSLKGDSRSCIELLMRMN 300
Query: 301 DEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
DEG+KPTLTTLTSI+YASSRSV LRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS
Sbjct: 301 DEGTKPTLTTLTSIVYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
Query: 361 SAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACS 420
SAETIFRSISKNEVVSWNVM+SGYVM+GNHI ALR YDNMKEHHVKPDA+TFSSTL ACS
Sbjct: 361 SAETIFRSISKNEVVSWNVMVSGYVMVGNHIQALRIYDNMKEHHVKPDALTFSSTLSACS 420
Query: 421 QLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
QLAALDKGRELH+CII+HKLE+N+IVMGALLDMYAKCGDVDEA+KLFHQLPKRDLVSWTS
Sbjct: 421 QLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEAQKLFHQLPKRDLVSWTS 480
Query: 481 MIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQY 540
MI+AYGSHGQASEALRLFDEMQKSNV+ADSV FLAVLSACSHAGLVDEGY YFNEMI+QY
Sbjct: 481 MISAYGSHGQASEALRLFDEMQKSNVRADSVAFLAVLSACSHAGLVDEGYTYFNEMIVQY 540
Query: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQ 600
DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKET++DIGLLSTLFSACRLHNDFVLGIQ
Sbjct: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETKSDIGLLSTLFSACRLHNDFVLGIQ 600
Query: 601 IGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIH 660
IGKMLIE+DP+DPSTYILLSNMYASVNKW+EV KVRRKM+E+GLKK+PGCSWIEINQ+IH
Sbjct: 601 IGKMLIEVDPNDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQKIH 660
Query: 661 PFFVEDKSNPLADGVYECLNILACHMEKNELEL 694
PFFVEDKSNP ADGVYECLNILACHMEKNE+EL
Sbjct: 661 PFFVEDKSNPSADGVYECLNILACHMEKNEVEL 693
BLAST of Lsi10G010840 vs. NCBI nr
Match:
XP_004140282.1 (pentatricopeptide repeat-containing protein At5g27110 [Cucumis sativus] >KGN48106.1 hypothetical protein Csa_003806 [Cucumis sativus])
HSP 1 Score: 1297.7 bits (3357), Expect = 0.0e+00
Identity = 628/693 (90.62%), Postives = 659/693 (95.09%), Query Frame = 0
Query: 1 MDYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELV 60
MDY+TLLSAL+TC SSKLLKQGKL+HQ+IFS GFQSNI L K+LIGFYFSCHDY SAELV
Sbjct: 1 MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60
Query: 61 FQTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLG 120
FQTND PLDVSLWNALLSA T NFRFVEALQLF QLNC+SYVRPD YTYPVVLKACGGLG
Sbjct: 61 FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120
Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 180
RV+YGRRIHNHL+KTGLIWDVFVGSS+MNMYAKCDQF DAI LFDEFPQRDVGCWN VIS
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180
Query: 181 CYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLL 240
CYFKD KAE ALK FDKMKELGFEPNSVTFTV VSSCTRLLNLERGKE+ RELI+R LL
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILL 240
Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMN 300
DAFVLSALVDMYGKCGCLEMAKEVFE+IPRKN ITWNAMITGYSLKGDSRSCIELLMRMN
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMN 300
Query: 301 DEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
DEG+KPTL TLTSIIYASSRSV LRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS
Sbjct: 301 DEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
Query: 361 SAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACS 420
SAETIFR+ISKNEVVSWNVMISG+VM+GNHI AL YDNMKEHHVKPDA+TFSSTL ACS
Sbjct: 361 SAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACS 420
Query: 421 QLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
QLAALDKGRELH+CII+HKLE+N+IVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS
Sbjct: 421 QLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
Query: 481 MIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQY 540
MI AYGSHGQASEALRLFDEMQK NV+ADSVTFLAVLSACSHAGLVDEGY YFNEM++QY
Sbjct: 481 MIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQY 540
Query: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQ 600
DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETR+DIGLLSTLFSAC LHN+FVLGIQ
Sbjct: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQ 600
Query: 601 IGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIH 660
IGKMLIE+DPDDPSTYILLSNMYASVNKW+EV KVRRKM+E+GLKK+PGCSWIEINQRIH
Sbjct: 601 IGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIH 660
Query: 661 PFFVEDKSNPLADGVYECLNILACHMEKNELEL 694
PFF EDKSNPLADGVYECLNIL CHMEKNELEL
Sbjct: 661 PFFAEDKSNPLADGVYECLNILGCHMEKNELEL 693
BLAST of Lsi10G010840 vs. NCBI nr
Match:
KAG7010290.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1285.0 bits (3324), Expect = 0.0e+00
Identity = 619/693 (89.32%), Postives = 652/693 (94.08%), Query Frame = 0
Query: 1 MDYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELV 60
MDYMTLLSAL+TCASSKLLKQGKL+HQ+IF GFQSN+ LCK LIGFYFSC+DYRSAELV
Sbjct: 1 MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELV 60
Query: 61 FQTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLG 120
FQTND PLDVSLWNALLSA TK+ RFVEALQLF QL HS+VRPDCYTYPVVLKACGGLG
Sbjct: 61 FQTNDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 120
Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 180
RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDA+NLFDE PQRDVGCWN VIS
Sbjct: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVNLFDEIPQRDVGCWNAVIS 180
Query: 181 CYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLL 240
CYF+DDK E ALKMFDKMKELGFEPNSVTFTV VSSC RLLNLERGKEI RELIDR LL
Sbjct: 181 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 240
Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMN 300
DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKN +TWN+MITGYSLKGDSRSCIELLMRMN
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSRSCIELLMRMN 300
Query: 301 DEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
EG++PTLTTLTSIIYASSRS+ LRHGKFIHGYILRNRIDVDIFIDVSLID YFKCG VS
Sbjct: 301 CEGTEPTLTTLTSIIYASSRSIQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVS 360
Query: 361 SAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACS 420
SAET+FR++SKNEVVSWNVMISGYVM+GNHI ALR YDNMKEHHVKPDAVTFSSTL ACS
Sbjct: 361 SAETVFRNVSKNEVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACS 420
Query: 421 QLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
QLAALDKGRELHHCIISHKLE N+IVMGALLDMYAKCGDV+EARKLFHQLP+RDLVSWTS
Sbjct: 421 QLAALDKGRELHHCIISHKLECNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTS 480
Query: 481 MIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQY 540
MI AYGSHGQASEALRLFDEMQKSNV+ADSVTFLAVLSACSHAGLVDEGY YFNEMI QY
Sbjct: 481 MITAYGSHGQASEALRLFDEMQKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQY 540
Query: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQ 600
DI+PGIEHYSCLIDLLGRAGRLHEAYEIL+RS+ETRND GLLSTLFSACRLHNDF LGIQ
Sbjct: 541 DIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQ 600
Query: 601 IGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIH 660
IGK+L+E+ PDDPSTYILLSNMYASVNKWEEV VRRKM+E+GLKK PGCSWIEINQRI
Sbjct: 601 IGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQ 660
Query: 661 PFFVEDKSNPLADGVYECLNILACHMEKNELEL 694
PFFVEDKSNP+ DGVYECL+ L CHMEKNELE+
Sbjct: 661 PFFVEDKSNPVVDGVYECLSTLGCHMEKNELEV 693
BLAST of Lsi10G010840 vs. NCBI nr
Match:
KAG6570414.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1283.9 bits (3321), Expect = 0.0e+00
Identity = 618/693 (89.18%), Postives = 652/693 (94.08%), Query Frame = 0
Query: 1 MDYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELV 60
MDYMTLLSAL+TCASSKLLKQGKL+HQ+IF GFQSN+ LCK LIGFYFSC+DYRSAELV
Sbjct: 1 MDYMTLLSALRTCASSKLLKQGKLIHQRIFCSGFQSNVTLCKALIGFYFSCYDYRSAELV 60
Query: 61 FQTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLG 120
FQTND PLDVSLWNALLSA TK+ RFVEALQLF QL HS+VRPDCYTYPVVLKACGGLG
Sbjct: 61 FQTNDCPLDVSLWNALLSAYTKSSRFVEALQLFDQLKSHSHVRPDCYTYPVVLKACGGLG 120
Query: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 180
RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDA+NLFDE PQRDVGCWN VIS
Sbjct: 121 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAVNLFDEIPQRDVGCWNAVIS 180
Query: 181 CYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLL 240
CYF+DDK E ALKMFDKMKELGFEPNSVTFTV VSSC RLLNLERGKEI RELIDR LL
Sbjct: 181 CYFQDDKPEAALKMFDKMKELGFEPNSVTFTVVVSSCARLLNLERGKEIHRELIDRSVLL 240
Query: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMN 300
DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKN +TWN+MITGYSLKGDS+SCIELLMRMN
Sbjct: 241 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNAMTWNSMITGYSLKGDSKSCIELLMRMN 300
Query: 301 DEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 360
EG++PTLTTLTSIIYASSRS+ LRHGKFIHGYILRNRIDVDIFIDVSLID YFKCG VS
Sbjct: 301 YEGTEPTLTTLTSIIYASSRSIQLRHGKFIHGYILRNRIDVDIFIDVSLIDLYFKCGSVS 360
Query: 361 SAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACS 420
SAET+FR++SKNEVVSWNVMISGYVM+GNHI ALR YDNMKEHHVKPDAVTFSSTL ACS
Sbjct: 361 SAETVFRNVSKNEVVSWNVMISGYVMVGNHIQALRVYDNMKEHHVKPDAVTFSSTLSACS 420
Query: 421 QLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 480
QLAALDKGRELHHCIISHKLE N+IVMGALLDMYAKCGDV+EARKLFHQLP+RDLVSWTS
Sbjct: 421 QLAALDKGRELHHCIISHKLECNEIVMGALLDMYAKCGDVNEARKLFHQLPERDLVSWTS 480
Query: 481 MIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQY 540
MI AYGSHGQASEALRLFDEMQKSNV+ADSVTFLAVLSACSHAGLVDEGY YFNEMI QY
Sbjct: 481 MITAYGSHGQASEALRLFDEMQKSNVRADSVTFLAVLSACSHAGLVDEGYIYFNEMITQY 540
Query: 541 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQ 600
DI+PGIEHYSCLIDLLGRAGRLHEAYEIL+RS+ETRND GLLSTLFSACRLHNDF LGIQ
Sbjct: 541 DIRPGIEHYSCLIDLLGRAGRLHEAYEILERSEETRNDTGLLSTLFSACRLHNDFGLGIQ 600
Query: 601 IGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIH 660
IGK+L+E+ PDDPSTYILLSNMYASVNKWEEV VRRKM+E+GLKK PGCSWIEINQRI
Sbjct: 601 IGKLLMEVHPDDPSTYILLSNMYASVNKWEEVRNVRRKMKELGLKKRPGCSWIEINQRIQ 660
Query: 661 PFFVEDKSNPLADGVYECLNILACHMEKNELEL 694
PFFVEDKSNP+ DGVYECL+ L CHMEKNELE+
Sbjct: 661 PFFVEDKSNPVVDGVYECLSTLGCHMEKNELEV 693
BLAST of Lsi10G010840 vs. TAIR 10
Match:
AT5G27110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 777.3 bits (2006), Expect = 1.0e-224
Identity = 371/691 (53.69%), Postives = 514/691 (74.38%), Query Frame = 0
Query: 1 MDYMTLLSALKTCA-SSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAEL 60
M+ LLS L+ C S+K L++ KL+HQ+I +LG + ++ LCK+LI YF+C D+ SA
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 61 VFQTNDSPLDVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGL 120
VF+ D DV +WN+L+S +KN F + L++F +L S PD +T+P V+KA G L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 121 GRVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVI 180
GR GR IH ++K+G + DV V SS++ MYAK + F +++ +FDE P+RDV WNTVI
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 181 SCYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTL 240
SC+++ +AE AL++F +M+ GFEPNSV+ TVA+S+C+RLL LERGKEI R+ + +G
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 241 LDAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRM 300
LD +V SALVDMYGKC CLE+A+EVF+++PRK+ + WN+MI GY KGDS+SC+E+L RM
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 301 NDEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYV 360
EG++P+ TTLTSI+ A SRS +L HGKFIHGY++R+ ++ DI+++ SLID YFKCG
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 361 SSAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPAC 420
+ AET+F K+ SWNVMIS Y+ +GN A+ YD M VKPD VTF+S LPAC
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 421 SQLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWT 480
SQLAAL+KG+++H I +LE++++++ ALLDMY+KCG+ EA ++F+ +PK+D+VSWT
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWT 480
Query: 481 SMIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQ 540
MI+AYGSHGQ EAL FDEMQK ++ D VT LAVLSAC HAGL+DEG K+F++M +
Sbjct: 481 VMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSK 540
Query: 541 YDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGI 600
Y I+P IEHYSC+ID+LGRAGRL EAYEI+Q++ ET ++ LLSTLFSAC LH + LG
Sbjct: 541 YGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGD 600
Query: 601 QIGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRI 660
+I ++L+E PDD STY++L N+YAS W+ +VR KM+E+GL+K PGCSWIE++ ++
Sbjct: 601 RIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKV 660
Query: 661 HPFFVEDKSNPLADGVYECLNILACHMEKNE 691
FF ED+S+ A+ VYECL +L+ HME +
Sbjct: 661 CHFFAEDRSHLRAENVYECLALLSGHMESGQ 691
BLAST of Lsi10G010840 vs. TAIR 10
Match:
AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 456.8 bits (1174), Expect = 3.0e-128
Identity = 238/688 (34.59%), Postives = 400/688 (58.14%), Query Frame = 0
Query: 2 DYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVF 61
D T S +K CA + G L++++I +GF+S++ + L+ Y A VF
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 62 QTNDSPL-DVSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLG 121
++ P+ D+ WN+L+S + + + EAL+++H+L +S++ PD +T VL A G L
Sbjct: 165 --DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK-NSWIVPDSFTVSSVLPAFGNLL 224
Query: 122 RVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVIS 181
V G+ +H +K+G+ V V + ++ MY K + DA +FDE RD +NT+I
Sbjct: 225 VVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMIC 284
Query: 182 CYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLL 241
Y K + E +++MF + + F+P+ +T + + +C L +L K I ++ G +L
Sbjct: 285 GYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL 344
Query: 242 DAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMN 301
++ V + L+D+Y KCG + A++VF + K+T++WN++I+GY GD ++L M
Sbjct: 345 ESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 404
Query: 302 DEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVS 361
+ T +I S+R L+ GK +H +++ I +D+ + +LID Y KCG V
Sbjct: 405 IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVG 464
Query: 362 SAETIFRSISKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACS 421
+ IF S+ + V+WN +IS V G+ L+ M++ V PD TF TLP C+
Sbjct: 465 DSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 524
Query: 422 QLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTS 481
LAA G+E+H C++ ES + AL++MY+KCG ++ + ++F ++ +RD+V+WT
Sbjct: 525 SLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTG 584
Query: 482 MIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQY 541
MI AYG +G+ +AL F +M+KS + DSV F+A++ ACSH+GLVDEG F +M Y
Sbjct: 585 MIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHY 644
Query: 542 DIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQ 601
I P IEHY+C++DLL R+ ++ +A E +Q + + D + +++ ACR D +
Sbjct: 645 KIDPMIEHYACVVDLLSRSQKISKAEEFIQ-AMPIKPDASIWASVLRACRTSGDMETAER 704
Query: 602 IGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIH 661
+ + +IE++PDDP IL SN YA++ KW++V +R+ +++ + KNPG SWIE+ + +H
Sbjct: 705 VSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVH 764
Query: 662 PFFVEDKSNPLADGVYECLNILACHMEK 689
F D S P ++ +Y+ L IL M K
Sbjct: 765 VFSSGDDSAPQSEAIYKSLEILYSLMAK 787
BLAST of Lsi10G010840 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 451.1 bits (1159), Expect = 1.7e-126
Identity = 240/689 (34.83%), Postives = 392/689 (56.89%), Query Frame = 0
Query: 1 MDYMTLLSALKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELV 60
+D TL S L+ CA SK LK GK + I GF + L L Y +C D + A V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 61 FQTNDSPLDVSL-WNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGL 120
F ++ ++ +L WN L++ K+ F ++ LF ++ S V D YT+ V K+ L
Sbjct: 152 F--DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSSL 211
Query: 121 GRVVYGRRIHNHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVI 180
V G ++H ++K+G VG+S++ Y K + A +FDE +RDV WN++I
Sbjct: 212 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 271
Query: 181 SCYFKDDKAETALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTL 240
+ Y + AE L +F +M G E + T + C + G+ + +
Sbjct: 272 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 331
Query: 241 LDAFVLSALVDMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRM 300
+ + L+DMY KCG L+ AK VF ++ ++ +++ +MI GY+ +G + ++L M
Sbjct: 332 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 391
Query: 301 NDEGSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYV 360
+EG P + T+T+++ +R L GK +H +I N + DIF+ +L+D Y KCG +
Sbjct: 392 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 451
Query: 361 SSAETIFRSISKNEVVSWNVMISGYV--MLGNHILALRTYDNMKEHHVKPDAVTFSSTLP 420
AE +F + +++SWN +I GY N L+L ++E PD T + LP
Sbjct: 452 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL-LLEEKRFSPDERTVACVLP 511
Query: 421 ACSQLAALDKGRELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVS 480
AC+ L+A DKGRE+H I+ + S++ V +L+DMYAKCG + A LF + +DLVS
Sbjct: 512 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 571
Query: 481 WTSMIAAYGSHGQASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMI 540
WT MIA YG HG EA+ LF++M+++ ++AD ++F+++L ACSH+GLVDEG+++FN M
Sbjct: 572 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 631
Query: 541 IQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVL 600
+ I+P +EHY+C++D+L R G L +AY ++ + D + L CR+H+D L
Sbjct: 632 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIE-NMPIPPDATIWGALLCGCRIHHDVKL 691
Query: 601 GIQIGKMLIEIDPDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQ 660
++ + + E++P++ Y+L++N+YA KWE+V ++R+++ + GL+KNPGCSWIEI
Sbjct: 692 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKG 751
Query: 661 RIHPFFVEDKSNPLADGVYECLNILACHM 687
R++ F D SNP + + L + M
Sbjct: 752 RVNIFVAGDSSNPETENIEAFLRKVRARM 775
BLAST of Lsi10G010840 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 439.1 bits (1128), Expect = 6.6e-123
Identity = 231/679 (34.02%), Postives = 376/679 (55.38%), Query Frame = 0
Query: 10 LKTCASSKLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFSCHDYRSAELVFQTNDSPLD 69
L+ C+S K L+Q + +F G L+ + A VF+ DS L+
Sbjct: 44 LERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 103
Query: 70 VSLWNALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVVYGRRIH 129
V L++ +L K +ALQ F ++ + V P Y + +LK CG + G+ IH
Sbjct: 104 V-LYHTMLKGFAKVSDLDKALQFFVRMR-YDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 163
Query: 130 NHLIKTGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYFKDDKAE 189
L+K+G D+F + + NMYAKC Q ++A +FD P+RD+ WNT+++ Y ++ A
Sbjct: 164 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 223
Query: 190 TALKMFDKMKELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAFVLSALV 249
AL+M M E +P+ +T + + + L + GKEI + G + +ALV
Sbjct: 224 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 283
Query: 250 DMYGKCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDEGSKPTLT 309
DMY KCG LE A+++F+ + +N ++WN+MI Y + + + + +M DEG KPT
Sbjct: 284 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 343
Query: 310 TLTSIIYASSRSVHLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRSI 369
++ ++A + L G+FIH + +D ++ + SLI Y KC V +A ++F +
Sbjct: 344 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 403
Query: 370 SKNEVVSWNVMISGYVMLGNHILALRTYDNMKEHHVKPDAVTFSSTLPACSQLAALDKGR 429
+VSWN MI G+ G I AL + M+ VKPD T+ S + A ++L+ +
Sbjct: 404 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 463
Query: 430 ELHHCIISHKLESNKIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIAAYGSHG 489
+H ++ L+ N V AL+DMYAKCG + AR +F + +R + +W +MI YG+HG
Sbjct: 464 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 523
Query: 490 QASEALRLFDEMQKSNVQADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIKPGIEHY 549
AL LF+EMQK ++ + VTFL+V+SACSH+GLV+ G K F M Y I+ ++HY
Sbjct: 524 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 583
Query: 550 SCLIDLLGRAGRLHEAYEILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGKMLIEID 609
++DLLGRAGRL+EA++ + + + + + + AC++H + + + L E++
Sbjct: 584 GAMVDLLGRAGRLNEAWDFIMQ-MPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELN 643
Query: 610 PDDPSTYILLSNMYASVNKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIHPFFVEDKSN 669
PDD ++LL+N+Y + + WE+V +VR M GL+K PGCS +EI +H FF ++
Sbjct: 644 PDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAH 703
Query: 670 PLADGVYECLNILACHMEK 689
P + +Y L L CH+++
Sbjct: 704 PDSKKIYAFLEKLICHIKE 716
BLAST of Lsi10G010840 vs. TAIR 10
Match:
AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 435.6 bits (1119), Expect = 7.2e-122
Identity = 254/722 (35.18%), Postives = 383/722 (53.05%), Query Frame = 0
Query: 17 KLLKQGKLLHQKIFSLGFQSNIPLCKTLIGFYFS--CHDYRSAELVFQTNDSPLDVSLWN 76
K + Q KL+HQK+ S G + + L LI Y S C + + L+ + S V WN
Sbjct: 39 KTISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSH-AVSLLRRFPPSDAGVYHWN 98
Query: 77 ALLSANTKNFRFVEALQLFHQLNCHSYVRPDCYTYPVVLKACGGLGRVVYGRRIHNHLIK 136
+L+ + N + L LF ++ S+ PD YT+P V KACG + V G H +
Sbjct: 99 SLIRSYGDNGCANKCLYLFGLMHSLSWT-PDNYTFPFVFKACGEISSVRCGESAHALSLV 158
Query: 137 TGLIWDVFVGSSMMNMYAKCDQFHDAINLFDEFPQRDVGCWNTVISCYFKDDKAETALKM 196
TG I +VFVG++++ MY++C DA +FDE DV WN++I Y K K + AL+M
Sbjct: 159 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 218
Query: 197 FDKM-KELGFEPNSVTFTVAVSSCTRLLNLERGKEIQRELIDRGTLLDAFVLSALVDMYG 256
F +M E G P+++T + C L GK++ + + + FV + LVDMY
Sbjct: 219 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 278
Query: 257 KCGCLEMAKEVFEQIPRKNTITWNAMITGYSLKGDSRSCIELLMRMNDE----------- 316
KCG ++ A VF + K+ ++WNAM+ GYS G + L +M +E
Sbjct: 279 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 338
Query: 317 ------------------------GSKPTLTTLTSIIYASSRSVHLRHGKFIHGYILRNR 376
G KP TL S++ + L HGK IH Y ++
Sbjct: 339 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 398
Query: 377 IDV-------DIFIDVSLIDFYFKCGYVSSAETIFRSISKNE--VVSWNVMISGYVMLGN 436
ID+ + + LID Y KC V +A +F S+S E VV+W VMI GY G+
Sbjct: 399 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 458
Query: 437 HILALRTYDNMKEH--HVKPDAVTFSSTLPACSQLAALDKGRELHHCIISHKLESNKI-V 496
AL M E +P+A T S L AC+ LAAL G+++H + ++ + + V
Sbjct: 459 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 518
Query: 497 MGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIAAYGSHGQASEALRLFDEMQKSNV 556
L+DMYAKCG + +AR +F + ++ V+WTS++ YG HG EAL +FDEM++
Sbjct: 519 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 578
Query: 557 QADSVTFLAVLSACSHAGLVDEGYKYFNEMIIQYDIKPGIEHYSCLIDLLGRAGRLHEAY 616
+ D VT L VL ACSH+G++D+G +YFN M + + PG EHY+CL+DLLGRAGRL+ A
Sbjct: 579 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 638
Query: 617 EILQRSKETRNDIGLLSTLFSACRLHNDFVLGIQIGKMLIEIDPDDPSTYILLSNMYASV 676
+++ + ++ L S CR+H LG + + E+ + +Y LLSN+YA+
Sbjct: 639 RLIEEMPMEPPPVVWVAFL-SCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 698
Query: 677 NKWEEVCKVRRKMREIGLKKNPGCSWIEINQRIHPFFVEDKSNPLADGVYECLNILACHM 689
+W++V ++R MR G+KK PGCSW+E + FFV DK++P A +Y+ +L HM
Sbjct: 699 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQ---VLLDHM 753
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| O04659 | 1.4e-223 | 53.69 | Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX... | [more] |
| Q9SS60 | 4.3e-127 | 34.59 | Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... | [more] |
| Q9SN39 | 2.3e-125 | 34.83 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
| Q3E6Q1 | 9.2e-122 | 34.02 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
| Q9LFL5 | 1.0e-120 | 35.18 | Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BAG7 | 0.0e+00 | 90.91 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A0A0KK21 | 0.0e+00 | 90.62 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432790 PE=4 SV=1 | [more] |
| A0A6J1FXU4 | 0.0e+00 | 89.18 | pentatricopeptide repeat-containing protein At5g27110 OS=Cucurbita moschata OX=3... | [more] |
| A0A6J1JHK4 | 0.0e+00 | 89.19 | pentatricopeptide repeat-containing protein At5g27110 OS=Cucurbita maxima OX=366... | [more] |
| A0A6J1DJC4 | 0.0e+00 | 85.71 | pentatricopeptide repeat-containing protein At5g27110 OS=Momordica charantia OX=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038902098.1 | 0.0e+00 | 93.07 | pentatricopeptide repeat-containing protein At5g27110 [Benincasa hispida] | [more] |
| TYJ96117.1 | 0.0e+00 | 90.91 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
| XP_004140282.1 | 0.0e+00 | 90.62 | pentatricopeptide repeat-containing protein At5g27110 [Cucumis sativus] >KGN4810... | [more] |
| KAG7010290.1 | 0.0e+00 | 89.32 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| KAG6570414.1 | 0.0e+00 | 89.18 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G27110.1 | 1.0e-224 | 53.69 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G03580.1 | 3.0e-128 | 34.59 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G18750.1 | 1.7e-126 | 34.83 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G11290.1 | 6.6e-123 | 34.02 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G16860.1 | 7.2e-122 | 35.18 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
