Lsi10G010720 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G010720
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein RETICULATA-RELATED 4, chloroplastic-like
Location	chr10: 14974098 .. 14979505 (-)
RNA-Seq Expression	Lsi10G010720
Synteny	Lsi10G010720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAATGCGCACAACCTCAAAAGTTTAGGTCTCTCGAAAATAAAAAATACAGTGAAATAAATTCATGAGAAAGCTTCAAAAGTCAAGGCAAGTTAAGAAGTTTTTGAAATGCCATAGGCCCATAGAGTCGATAACAACTTGGCTCATCTTCTCTCTAGGGTAGCGATGGATTTCTCTTTTGGCCAACTTTCCTTCTCCAACTTAGAGGAGAAAGTTGTTTTTTCGGAATTGTAATTACTACAAGTGATTCTCCTATGCTTTTGACGAACTTTGTTGTACCTAATTCTGCTTGTTATATAGAAATTATGTTTTTTTTTAAAAACAAAACTAATTGAGATGTTGAAGGAAAAAAGAGTTTTTTTTATAAAGTTTTAAGGGCGTGCAAAAGAATTGGTTGGGAATACATGGGGATATTTGGTAATTAAGAAACATTCTCGTTTTTCTTGCAAGTTCAGCACATGCATGCATAGGGTTGGGTGCAGCGGTGATACCTAACACTTCTCTCATTTTTTTAATATCAACATTCAAAAATTCGACTTCCCAAAATGCCCTTATGCGCGTAAAGCCCACGGACGAATTGCGCGCGTGGAGAATTTAGGAATTATTAATTATTTTTATTAAGGAAATAATAAATATATAAATAGGTCTGTTTTACCTTAGGCCTTTTGACAGAAAAAGGAAAAAACCCCAATGGTTTCTTCTGCAGCTCTGCCATCTAAGTTCTAAGTTCTAAGTTCCGCCGCCCACCTACTCCACCGTACCGTTTGAAACTAAAACCTCCGCCGCCGCCGATCTACGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTGATCGCGATGGCTTTTGCCGCTTTCACTAACCTGTCTTCTTTCTCTCTCTCTAACTTCAATCATAATCGTTCATTGCAGTCATCGCCTTCGCATTTGCTCCAATTGCGAATCTCCGCTTCCCCAGTTTTCACCTCTTCTTCCACCGGTATCAAGGCCACCGGTATTTGTCTCACTCGTCGAAATGACCGTCGCGATCTCAGTAACCGTCGACAGCTGTTTTTGGTGTCTTCTTTTGGCGGTGGTGGTGCTGATGGCGGTGACTCTTCTTCGCGCGGCGGAGGAGGGGGCGGCGGAGATGATCATGGTGATGAAGGAGATTCTGGTAATGCCGGTGATAAGAACAAGGCGGAGGCGCTTTTGGTGTTGGCTGAGGCTGGCCGGTCACTGGAATGCCTACCGAAGGACTTGGCGGCGGCGATCGAGGCCGGTCGAATCCCTGGATCGGTGGTCACGAAGTTTTTGGAGCTCGAGAAGTCTGCTCTCATGCGATGGTTGATGCAGTTTGGTGGATTCAAGGAGCGTCTGTTGGCGGATGATTTGTTTCTGGCGAAGGTCGGGATGGAATGCGGCGTTGGGGTCTTCACTAAGGTTTTCTTTTCACTCACTCTCATATTTCGGATCAGTAAATATGCCTTTTATCATCTCTAGGGATCCTCTGGCTTCTTTTATTGCATTTCTTTTGTTCTTCGCCTTTACTGACTACTAAAGAAACATTTCCCCCAACTTTTTTCAATTTCTTTGCCACTCATCTGCCCATGTTCAAATTTGAATTGCAAGATCATTTACTTATCACTTTGAATTGTGATGTTTTAAGCTTTTTGAACTGATATTTTCGTTAGGGTTTTCTACTTTTTTTAGCGAAAATTTGTCAGTATCTCTGCTGTATCTCTGTTTTGCATGCATAGCTGCATTAATCGATATCATCGAAGGACACGAGCCCTTTTCTTTTGTCTGATCATTTCCTTGACATACGTTTTGTTTTTAGCTTATTGTATAATTTTCGCCCCTTCCTGCTTCCCTCTCCTTTGCATTCTCATTTTCGTAATTTATTGTGCAGACTGCTGCAGAGTATGAACGCCGAAGGGAAAAGTTCTTTGACGAGCTCGAGATTGTTTTTGCTGACGTGGTATAATTCTGTTGTTAAAAGGCCATACTCATCAGATTTTTATACGTTCCACCTTGCACATGTCTGAGTGATTGCACTAGAGTATTCGCTTGAAATATACGTTTGTCTGCTGTAAGATCATATCATCCTGTTCCCCTTAAAAAGAAATTGTTGGGAGTGATCAAACATTTCGTAAAGGTTAGATGCACAGAACTTCATTAAAGTAAAAAGAAAAAAACTTATCATTCTCACATGCATCCAGCCGTTTAAAAGTGGAAGTCTTACTGTGCTAGCCACGGTATTGAGTGATCGTTGCAGAATCTATAATGGTTAAAAGTCAAGGAGTTGATGATCCAAAAACTAGAACTGTGGTCATCATCAGTCACAGCTAAAAATTTGTGCTGGCATCCAAACTGTTTAAGATAAGCAATCACTGCCAAGAATCTGTCTATTGTGGTTGGGAGAAGATGGTAAGGTAACACACAATACTTGATCACTGAAGTATTAGAGCAATCAGTCTGATGCAATGATTGAACTAAGGACAGGGACTGCTTTCTTGGAGGTTGGAAAATGAATATGTGCTGATGTCTTGTTAAATATTTTGAAAAATGGTTGATCGGGGATTTGGCTAAGACAAGTGTAGCTAATTAATACTTATGGTATTTGCAGTTTTTATTTGTCCTAAGCAATTGTATTCTCTTTCAAAACTCTTGAATATACCTAATGCACATTCTCTTTTTGTTATAAAAGATGGCCTTTTAAGCATATATGTTGACTAGTACATACTTTTTTTAGGTAATGGCCATCATTGCAGATTTCATGCTTGTTTATCTTCCTGCTCCAACTGTTTCTCTCCGACCACCACTTTCAGTGAGTGCAGGAGCAATTACGAGGTTCTTCCATGGATGTCCTGATAATGCTTTTCAGGTCTGTCATTCTCATGGAATAATTTGATTTTTGCTGAACATTTCTTTTGAGGATCGAGAACTAAATTACTGTTCTGTTTTAGGTTGCTCTCTCTGGAACTTCGTACTCATTATTACAGAGATGTGGCGCAATAGCGGTATGACAATTTTTAAATAAATTTTGCGTTAATTTTATATATTTGAAGAAAAATGCAAAATCAACTTATTTATGTCTTTGGCGGTTAATTTTGCAGCGTAATGGAGCTAAGCTTTTTGCTGTTGGCACCACTTCATCACTGGTATGTTGTCATATACGGGAAATTCTGAAATTTTTACAGTCTTTTGTATGATATTAAAGTCATCTTTTATGACCTCTTTTGCTGCCCACTGCTGAGAGTCATCTGTCATTGGAAAATGTTCGATTGTTTTGCCACCTGTCACCATCAAAATTCTAAAATTTGGCTCAGTGTGTCTTTAGTTTTAGATGAATAGGTTAGGGCCCACTTCTCCCTCTACTTTTTTTCTCAGGAAAGTTTTTTTCCGCATTAAACTTGTAACGCAGTTCTTTGAAGATTGGGAGTGTGGGCAGCAAAATTATGAACGGTGAACCGTTGGGTCTTATCGCCTGACCTCTTGCTCTCATATCTTTAAGTCCATATTATTTTTACACTGTGCCACTTTCTTGTAGTGACACTCGAATCAATCATGTTAACTGAGACCCATCTCAGCTCATGTGCAAAAAAAATAATAATTAAAAATTTCGCTTTATAGCCCCAACATTAACTACCAGACCTCTTTTGGGATTCTTGTTTCTCTAGCTGCCTACAAAGGTGTTTGAGTTTTGGATAAAAATTGCAGAAACTAATTCATCATGCCCTCTGTTTAGGTTGGCACAGCTGTTACAAACGCATTAATCAATGCAAGGAAGGCTATTGATAAAAATGGTGGCGCTGAAGTGGAAAATGTGCCCATACTTTCCACCAGTGTTGGCTACGGTGTCTACATGGCTGTCTCCAGCAATCTCAGGTATTGGTTTTCTGCAGTCATAAGTATTAACTTGTTGTATGTCTTAGAACAACCATGCTTTACATATTCCTTTGAAATTTCACGTCTTGGTTCTTTTCTATATTCTGTGTTATGGCGTTACCTTTCTTGTATATTCTAAAAAGTGTGCTATCTTTCTGCATCATGATTGTCATACATGTCATATGATATAGGGGGTCTAGGTTTTAAGAATAGTAGGGAAAAACTATGCTTGACGGATGTGAATTTAGATAGGGGAGGTGGGTCGTTAGTTCTGGCTGGGAGAGGTATGATAGTAGAAGTTGATCTTTCTATTGAGATTTTCAAGACTTGTCGAGAGGGGAATTTCAGCTTTTAATCACAGTTGCTTTGGATCTATTCCTCCTCCAATAAACTAACCTTTTTTATTGGGCATGTAAATATAAGGTCCACGCTGTGTGGAACAAGCAGTCTGAGTGTTTGGTGCCTAATAAAATGCTCGATTCTGTCCATTATTCTTTCTGAGAAAGTACTTCAATGATTTTATATTTAGAAACATTATATATGGTGCATTTTTTACCCTGGCTTACAACAATGTCAACCGCCCTTTTGTGTTCACTTCGTTGCACAAATATTATACGCTAATGTTTTCCAGAAGTAGAGATTTATTGCAGTCTTGGACGTGATTGGTATTCATTTGACTTCGCGATAGCAGGTTTTATGCCTGGTCTATAAGCTTTTGAAAAACAAGTTGCCGTGTATGATATGAATGATATGTATTAGAATGCAAGGGTTGAACCCAGGTTTGTTAGCTTGTTGGCCATTTGGTTGGCTCGAATTAAGCCATTCAAACATGTCGAGGTTTGAAGCTCAACAATCGGTAGGGGGTTCAAGGTTTAATGTATGGTGGTAATGTCTTTGGATTTGATACCAAAATCTGGATATAATCAAATAGTAACAGATTGCTTTGAGATGAAAAGGGACAGTTACATTGTTATTTGTGTTAACTATTCCAAGATCTGGATGTAATCAAATTGTAACGTTGAGAGTTCATCCATTCTGGAGCTTTTCTTATAACCAAGATATTTTTCGTTCTGTGTAGGTACCAAGTTCTGGCTGGTGTTATTGAACAACGAATCTTGGAACCCATGTTGCACCAGCACAAGCTCATGCTGAGTGCAATTTGCTTTGCTGTTAGGACAGGCAACACATTCCTTGGCTCACTCTTGTAAGATTTTCACCCCTTCTCCCTGGAATCCAAAACCACTACCGTATTCTTTCATTTTCTTTTCTCCATCTCTAAGTAAAAGTTGGTTACTTTAAACTGTGATTGCTTGCTTATCTTTCTCTATTACAACTCACATTGTGTAAACTTGCTTTTGGCAGGTGGGTGGACTATGCCCGTTTGATAGGAGTTCAGTAGTGAATGCTAGCTAATTCCTTAGGTTTGCTTTGATTAAAGTTCAAATGAAGGTGATGAAGGTTCCAGTTTACAATTAAGTTCAATTGGCGTTTTTTTGGGTTTTAGTTATATTTCACTTTTTTT

mRNA sequence

ATGATCAATGCGCACAACCTCAAAAGTTTAGTTTTCACCTCTTCTTCCACCGGTATCAAGGCCACCGGTATTTGTCTCACTCGTCGAAATGACCGTCGCGATCTCAGTAACCGTCGACAGCTGTTTTTGGTGTCTTCTTTTGGCGGTGGTGGTGCTGATGGCGGTGACTCTTCTTCGCGCGGCGGAGGAGGGGGCGGCGGAGATGATCATGGTGATGAAGGAGATTCTGGTAATGCCGGTGATAAGAACAAGGCGGAGGCGCTTTTGGTGTTGGCTGAGGCTGGCCGGTCACTGGAATGCCTACCGAAGGACTTGGCGGCGGCGATCGAGGCCGGTCGAATCCCTGGATCGGTGGTCACGAAGTTTTTGGAGCTCGAGAAGTCTGCTCTCATGCGATGGTTGATGCAGTTTGGTGGATTCAAGGAGCGTCTGTTGGCGGATGATTTGTTTCTGGCGAAGGTCGGGATGGAATGCGGCGTTGGGGTCTTCACTAAGACTGCTGCAGAGTATGAACGCCGAAGGGAAAAGTTCTTTGACGAGCTCGAGATTGTTTTTGCTGACGTGGTAATGGCCATCATTGCAGATTTCATGCTTGTTTATCTTCCTGCTCCAACTGTTTCTCTCCGACCACCACTTTCAGTGAGTGCAGGAGCAATTACGAGGTTCTTCCATGGATGTCCTGATAATGCTTTTCAGGTTGCTCTCTCTGGAACTTCGTACTCATTATTACAGAGATGTGGCGCAATAGCGCGTAATGGAGCTAAGCTTTTTGCTGTTGGCACCACTTCATCACTGGTTGGCACAGCTGTTACAAACGCATTAATCAATGCAAGGAAGGCTATTGATAAAAATGGTGGCGCTGAAGTGGAAAATGTGCCCATACTTTCCACCAGTGTTGGCTACGGTGTCTACATGGCTGTCTCCAGCAATCTCAGGTACCAAGTTCTGGCTGGTGTTATTGAACAACGAATCTTGGAACCCATGTTGCACCAGCACAAGCTCATGCTGAGTGCAATTTGCTTTGCTGTTAGGACAGGCAACACATTCCTTGGCTCACTCTTGTGGGTGGACTATGCCCGTTTGATAGGAGTTCAGTAGTGAATGCTAGCTAATTCCTTAGGTTTGCTTTGATTAAAGTTCAAATGAAGGTGATGAAGGTTCCAGTTTACAATTAAGTTCAATTGGCGTTTTTTTGGGTTTTAGTTATATTTCACTTTTTTT

Coding sequence (CDS)

ATGATCAATGCGCACAACCTCAAAAGTTTAGTTTTCACCTCTTCTTCCACCGGTATCAAGGCCACCGGTATTTGTCTCACTCGTCGAAATGACCGTCGCGATCTCAGTAACCGTCGACAGCTGTTTTTGGTGTCTTCTTTTGGCGGTGGTGGTGCTGATGGCGGTGACTCTTCTTCGCGCGGCGGAGGAGGGGGCGGCGGAGATGATCATGGTGATGAAGGAGATTCTGGTAATGCCGGTGATAAGAACAAGGCGGAGGCGCTTTTGGTGTTGGCTGAGGCTGGCCGGTCACTGGAATGCCTACCGAAGGACTTGGCGGCGGCGATCGAGGCCGGTCGAATCCCTGGATCGGTGGTCACGAAGTTTTTGGAGCTCGAGAAGTCTGCTCTCATGCGATGGTTGATGCAGTTTGGTGGATTCAAGGAGCGTCTGTTGGCGGATGATTTGTTTCTGGCGAAGGTCGGGATGGAATGCGGCGTTGGGGTCTTCACTAAGACTGCTGCAGAGTATGAACGCCGAAGGGAAAAGTTCTTTGACGAGCTCGAGATTGTTTTTGCTGACGTGGTAATGGCCATCATTGCAGATTTCATGCTTGTTTATCTTCCTGCTCCAACTGTTTCTCTCCGACCACCACTTTCAGTGAGTGCAGGAGCAATTACGAGGTTCTTCCATGGATGTCCTGATAATGCTTTTCAGGTTGCTCTCTCTGGAACTTCGTACTCATTATTACAGAGATGTGGCGCAATAGCGCGTAATGGAGCTAAGCTTTTTGCTGTTGGCACCACTTCATCACTGGTTGGCACAGCTGTTACAAACGCATTAATCAATGCAAGGAAGGCTATTGATAAAAATGGTGGCGCTGAAGTGGAAAATGTGCCCATACTTTCCACCAGTGTTGGCTACGGTGTCTACATGGCTGTCTCCAGCAATCTCAGGTACCAAGTTCTGGCTGGTGTTATTGAACAACGAATCTTGGAACCCATGTTGCACCAGCACAAGCTCATGCTGAGTGCAATTTGCTTTGCTGTTAGGACAGGCAACACATTCCTTGGCTCACTCTTGTGGGTGGACTATGCCCGTTTGATAGGAGTTCAGTAG

Protein sequence

MINAHNLKSLVFTSSSTGIKATGICLTRRNDRRDLSNRRQLFLVSSFGGGGADGGDSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELEKSALMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITRFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGGAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ

Homology

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BLAST of Lsi10G010720 vs. ExPASy Swiss-Prot
Match: Q94CJ5 (Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER4 PE=2 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 5.5e-134
Identity = 253/325 (77.85%), Postives = 286/325 (88.00%), Query Frame = 0


Query: 43  LVSSFGGGGAD--GGDSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLEC 102
           L +S G GG+D  GG  S  GGGG GG + GD G      D+N+ EA+L+L E+G  LE 
Sbjct: 60  LSASSGNGGSDNNGGGLSGGGGGGDGGKNDGD-GHGDEDRDRNRNEAMLLLKESGIELES 119

Query: 103 LPKDLAAAIEAGRIPGSVVTKFLELEKSALMRWLMQFGGFKERLLADDLFLAKVGMECGV 162
           LPKDLAAAIEAGRIPGSV+T+FLEL+KSA+MRWLMQFGGF+ERLLADDLF+AK+ MECGV
Sbjct: 120 LPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGV 179

Query: 163 GVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAIT 222
           G+FTKTAAEYERRRE FF+ELE+VFADV MAIIADFMLVYLPAPTVSLRPPL+++AG I+
Sbjct: 180 GIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGIS 239

Query: 223 RFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVTNALINARKA 282
           +FFH CPDNAFQVALSGTSY+LLQR GAI RNGAKLFAVGTTSSLVGTA+TNA I ARKA
Sbjct: 240 KFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKA 299

Query: 283 IDKNGGAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPMLHQHKLMLSAIC 342
           +D+N   EVE VPI+STSV YGVYMAVSSNLRYQ++AGVIEQR+LEPMLHQHKL LSA+C
Sbjct: 300 VDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRLLEPMLHQHKLALSALC 359

Query: 343 FAVRTGNTFLGSLLWVDYARLIGVQ 366
           FAVRTGNTFLGSLLWVDYARLIG+Q
Sbjct: 360 FAVRTGNTFLGSLLWVDYARLIGIQ 383

[Close]

BLAST of Lsi10G010720 vs. ExPASy Swiss-Prot
Match: Q9SIY5 (Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER5 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.5e-46
Identity = 109/291 (37.46%), Postives = 166/291 (57.04%), Query Frame = 0


Query: 83  NKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELEKSALMRWLMQ-FGGFK 142
           ++AE   V+  AGR  + LP+D+   ++ G +   ++  F +LE+  L+  L Q F GF+
Sbjct: 410 DRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFR 469

Query: 143 ERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYL 202
           ERLLAD  FL ++ +E  + + T   A+YE+R+E FF+EL+ V  D V A + DF  V+L
Sbjct: 470 ERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWL 529

Query: 203 PAPTVSLRPPLSVSAG-----AITRFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKL 262
           PAPT+S       + G     A+       PDNAFQ +L G  ++L  R  ++   G KL
Sbjct: 530 PAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKL 589

Query: 263 FAVGTTSSLVGTAVTNALINARKAI--DKNGGAEVENVPILSTSVGYGVYMAVSSNLRYQ 322
             VG  SS      +NAL   RK I  +   G + +  P+L T++ YG Y+  SSN+RYQ
Sbjct: 590 AGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQ 649

Query: 323 VLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 366
           ++AG+IE RI + +  Q  L+++ I F VR  N++ G+  W+D AR  G+Q
Sbjct: 650 IIAGLIEHRISDELSSQ-PLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699

[Close]

BLAST of Lsi10G010720 vs. ExPASy Swiss-Prot
Match: Q8RWG3 (Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER6 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.8e-44
Identity = 107/291 (36.77%), Postives = 165/291 (56.70%), Query Frame = 0


Query: 83  NKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELEKSALMRWLMQ-FGGFK 142
           ++AE   V+  AGR  + LP D+   ++ G +   V+    +LE+  L+  L Q F GF+
Sbjct: 419 DRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRFQGFR 478

Query: 143 ERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYL 202
           ERLLAD  FL ++ +E  + + T   A+YE+R+E FF+E++ V  D V   + DF  V+L
Sbjct: 479 ERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWL 538

Query: 203 PAPTVSLRPPLSVSAG-----AITRFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKL 262
           PAPT+S       + G     A+       PDNAFQ +L+G  ++L  R  ++   G KL
Sbjct: 539 PAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLKL 598

Query: 263 FAVGTTSSLVGTAVTNALINARKAIDKN--GGAEVENVPILSTSVGYGVYMAVSSNLRYQ 322
             VG  SS      +NAL  ARK I        + +  P+L T++ YG ++  S+NLRYQ
Sbjct: 599 AGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQ 658

Query: 323 VLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 366
           ++AG+IE R+ + +  Q  L+++AI F VRT N++ G+  W+D AR  G+Q
Sbjct: 659 IIAGLIEHRLSDELSSQ-PLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQ 708

[Close]

BLAST of Lsi10G010720 vs. ExPASy Swiss-Prot
Match: Q9FGP9 (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.2e-26
Identity = 100/332 (30.12%), Postives = 166/332 (50.00%), Query Frame = 0


Query: 50  GGADGGDSSSRG-GGGGGGDDHGDEG-DSGNAGDKNKAEALL----VLAEAGRSLECLPK 109
           G  DGG +   G GGGGGGD  GD+G D  +  ++ +   +L    V+ E  R    LP+
Sbjct: 108 GNNDGGGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPE 167

Query: 110 DLAAAIEAGRIPGSVVTKFLELEKSALMRWLMQF-----GGFKERLLADDLFLAKVGMEC 169
           D+  A ++  I    + ++L+L+ S    W + F        + R+LAD  FL KVG E 
Sbjct: 168 DMLEAAKSVGIRKLFLLRYLDLQGSV---WPLGFLMRSCAMLRNRMLADPSFLFKVGTEV 227

Query: 170 GVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGA 229
            +     T AE ++R E F+ E E+  AD+++ ++ D  LV L AP   +  P   S G 
Sbjct: 228 AIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGL 287

Query: 230 ITRFFHGC---PDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVTNALI 289
                  C   P + F+    G  +S+ QR       G    +VG    L+G  + N ++
Sbjct: 288 FKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIANLIM 347

Query: 290 NARKAIDKNGGAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPMLHQHKLM 349
            A++++ K    +V   P+  ++  +GV++ +SSN RYQ++ G+  +R++E      ++ 
Sbjct: 348 TAKRSV-KKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGL--ERVVEGSTAAKRIP 407

Query: 350 LSAICF--AVRTGNTFLGSLLWVDYARLIGVQ 366
           + A+ F   VR  N   G + +VD+A+L GVQ
Sbjct: 408 VVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

[Close]

BLAST of Lsi10G010720 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.7e-24
Identity = 100/332 (30.12%), Postives = 165/332 (49.70%), Query Frame = 0


Query: 48  GGGGADGGDSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAA 107
           G  G+DG      GG GG GD  G++ +    G   K E ++   EA  +   LP D+  
Sbjct: 114 GFNGSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGA--TLPSDMLE 173

Query: 108 AIEAGRIPGSVVTKFLELEKS------ALMRWLMQFGGFKERLLADDLFLAKVGMECGVG 167
           A +   I   ++ ++L+L+ S      A+  W M     + R+LAD  FL K+G E  + 
Sbjct: 174 AAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAM----LRNRMLADPSFLFKIGAEIVID 233

Query: 168 VFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITR 227
               T AE ++R + F+ E E+  AD+++  + +  LV + AP V    P S S G + R
Sbjct: 234 SCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQP-SASPGFLGR 293

Query: 228 F---FHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVTNALINAR 287
               ++  P + F+    G  +S  QR       G    AVG    +VG  + N ++ A+
Sbjct: 294 MVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAK 353

Query: 288 KAIDKNGGAEVENVPI---LSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPMLHQHKLM 347
           + I+K+     EN+P+   + ++  +GV+++VSSN RYQ++ G+  +R++E      K  
Sbjct: 354 RNINKS----EENIPVPPLIKSAALWGVFLSVSSNTRYQIINGL--ERVVEASPFAKKFP 413

Query: 348 LSAICF--AVRTGNTFLGSLLWVDYARLIGVQ 366
            +A+ F   VR  N   G + +VD+ARL G Q
Sbjct: 414 PAAMAFTVGVRLANNIYGGMQFVDWARLSGCQ 432

[Close]

BLAST of Lsi10G010720 vs. ExPASy TrEMBL
Match: A0A0A0KF11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434380 PE=3 SV=1)

HSP 1 Score: 640.2 bits (1650), Expect = 5.3e-180
Identity = 339/357 (94.96%), Postives = 348/357 (97.48%), Query Frame = 0


Query: 9   SLVFTSSSTGIKATGICLTRRNDRRDLSNRRQLFLVSSFGGGGADGGDSSSRGGGGGGGD 68
           S VFTSSSTGIKA G+ LT RNDRRDLSNRRQLFLVSSFGGGG DGGDSSSRGGGGGGGD
Sbjct: 38  SPVFTSSSTGIKANGLSLTCRNDRRDLSNRRQLFLVSSFGGGGDDGGDSSSRGGGGGGGD 97

Query: 69  DHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELEKS 128
           DHGDEGDSGNAGDKNKAEALLVLAEAG+SLE LPKDLA AIEAGRIPGSVVTKFLEL+KS
Sbjct: 98  DHGDEGDSGNAGDKNKAEALLVLAEAGQSLESLPKDLAVAIEAGRIPGSVVTKFLELQKS 157

Query: 129 ALMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADV 188
           A+MRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADV
Sbjct: 158 AIMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADV 217

Query: 189 VMAIIADFMLVYLPAPTVSLRPPLSVSAGAITRFFHGCPDNAFQVALSGTSYSLLQRCGA 248
           VMAIIADFMLVYLPAPTVSLRPPLSV+AGAIT+FFHGCPDNAFQ+ALSGTSYSLLQR GA
Sbjct: 218 VMAIIADFMLVYLPAPTVSLRPPLSVNAGAITKFFHGCPDNAFQIALSGTSYSLLQRFGA 277

Query: 249 IARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGGAEVENVPILSTSVGYGVYMAVS 308
           IARNGAKLFAVGTTSSLVGTA TNALINARKAIDKNGGAEVENVPILSTSVGYGVYMAVS
Sbjct: 278 IARNGAKLFAVGTTSSLVGTAATNALINARKAIDKNGGAEVENVPILSTSVGYGVYMAVS 337

Query: 309 SNLRYQVLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 366
           SNLRYQV+AGVIEQRILEPMLHQHKL+LSAICFAVRTGNTFLGSLLWVDYARLIGVQ
Sbjct: 338 SNLRYQVVAGVIEQRILEPMLHQHKLLLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 394

[Close]

BLAST of Lsi10G010720 vs. ExPASy TrEMBL
Match: E5GBT0 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 633.3 bits (1632), Expect = 6.5e-178
Identity = 339/360 (94.17%), Postives = 347/360 (96.39%), Query Frame = 0


Query: 9   SLVFTSSSTGIKATGICLTRRNDRRDLSNRRQLFLVSSF---GGGGADGGDSSSRGGGGG 68
           S VF SSSTGIKA G+ LT RNDRRDLSNRR+LFLVSSF   GGGGADGGDSSSRGGGGG
Sbjct: 38  SPVFNSSSTGIKANGLSLTCRNDRRDLSNRRELFLVSSFGGGGGGGADGGDSSSRGGGGG 97

Query: 69  GGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLEL 128
           GGDDHGD+GDSGNAGDKNKAEALLVLAEAG SLECLPKDLA AIEAGRIPGSVVTKFLEL
Sbjct: 98  GGDDHGDQGDSGNAGDKNKAEALLVLAEAGWSLECLPKDLAVAIEAGRIPGSVVTKFLEL 157

Query: 129 EKSALMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVF 188
           +KSALMRWLMQFGGFKERLLADDLFLAKV MECGVGVFTKTAAEYERRREKFFDELEIVF
Sbjct: 158 QKSALMRWLMQFGGFKERLLADDLFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVF 217

Query: 189 ADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITRFFHGCPDNAFQVALSGTSYSLLQR 248
           ADVVMAIIADFMLVYLPAPTVSLRPPLSV+AGAIT+FFHGCPDNAFQVALSGTSYSLLQR
Sbjct: 218 ADVVMAIIADFMLVYLPAPTVSLRPPLSVNAGAITKFFHGCPDNAFQVALSGTSYSLLQR 277

Query: 249 CGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGGAEVENVPILSTSVGYGVYM 308
            G+IARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNG AEVENVPILSTSVGYGVYM
Sbjct: 278 FGSIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGAAEVENVPILSTSVGYGVYM 337

Query: 309 AVSSNLRYQVLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 366
           AVSSNLRYQVLAGVIEQRILEPMLHQHKL+LSAICFAVRTGNTFLGSLLWVDYARLIGVQ
Sbjct: 338 AVSSNLRYQVLAGVIEQRILEPMLHQHKLLLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 397

[Close]

BLAST of Lsi10G010720 vs. ExPASy TrEMBL
Match: A0A1S3BNJ2 (protein RETICULATA-RELATED 4, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103491492 PE=3 SV=1)

HSP 1 Score: 633.3 bits (1632), Expect = 6.5e-178
Identity = 339/360 (94.17%), Postives = 347/360 (96.39%), Query Frame = 0


Query: 9   SLVFTSSSTGIKATGICLTRRNDRRDLSNRRQLFLVSSF---GGGGADGGDSSSRGGGGG 68
           S VF SSSTGIKA G+ LT RNDRRDLSNRR+LFLVSSF   GGGGADGGDSSSRGGGGG
Sbjct: 38  SPVFNSSSTGIKANGLSLTCRNDRRDLSNRRELFLVSSFGGGGGGGADGGDSSSRGGGGG 97

Query: 69  GGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLEL 128
           GGDDHGD+GDSGNAGDKNKAEALLVLAEAG SLECLPKDLA AIEAGRIPGSVVTKFLEL
Sbjct: 98  GGDDHGDQGDSGNAGDKNKAEALLVLAEAGWSLECLPKDLAVAIEAGRIPGSVVTKFLEL 157

Query: 129 EKSALMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVF 188
           +KSALMRWLMQFGGFKERLLADDLFLAKV MECGVGVFTKTAAEYERRREKFFDELEIVF
Sbjct: 158 QKSALMRWLMQFGGFKERLLADDLFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVF 217

Query: 189 ADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITRFFHGCPDNAFQVALSGTSYSLLQR 248
           ADVVMAIIADFMLVYLPAPTVSLRPPLSV+AGAIT+FFHGCPDNAFQVALSGTSYSLLQR
Sbjct: 218 ADVVMAIIADFMLVYLPAPTVSLRPPLSVNAGAITKFFHGCPDNAFQVALSGTSYSLLQR 277

Query: 249 CGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGGAEVENVPILSTSVGYGVYM 308
            G+IARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNG AEVENVPILSTSVGYGVYM
Sbjct: 278 FGSIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGAAEVENVPILSTSVGYGVYM 337

Query: 309 AVSSNLRYQVLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 366
           AVSSNLRYQVLAGVIEQRILEPMLHQHKL+LSAICFAVRTGNTFLGSLLWVDYARLIGVQ
Sbjct: 338 AVSSNLRYQVLAGVIEQRILEPMLHQHKLLLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 397

[Close]

BLAST of Lsi10G010720 vs. ExPASy TrEMBL
Match: A0A6J1K4R1 (protein RETICULATA-RELATED 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111490744 PE=3 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 7.7e-171
Identity = 321/361 (88.92%), Postives = 339/361 (93.91%), Query Frame = 0


Query: 5   HNLKSLVFTSSSTGIKATGICLTRRNDRRDLSNRRQLFLVSSFGGGGADGGDSSSRGGGG 64
           H   S  FTS + GI+A G+ LTRR+DR DLSNRR++F VSS GGGG+DGG+ SSRGGGG
Sbjct: 34  HISASPAFTSLTAGIRANGMFLTRRHDRCDLSNRRRMFWVSSSGGGGSDGGNFSSRGGGG 93

Query: 65  GGGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLE 124
           GGGDDHG+EG SGNAGDKNKAEALLVLAEAGRSLECLPKDL AAIEAGRIPGSV+TKF E
Sbjct: 94  GGGDDHGNEGGSGNAGDKNKAEALLVLAEAGRSLECLPKDLVAAIEAGRIPGSVITKFFE 153

Query: 125 LEKSALMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIV 184
           LEKSA+MRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIV
Sbjct: 154 LEKSAIMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIV 213

Query: 185 FADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITRFFHGCPDNAFQVALSGTSYSLLQ 244
           FADVVMA+IADFMLVYLPAPTVSLRPPLSVSAGAI +FFHGCPDNAFQVALSGTSYSLLQ
Sbjct: 214 FADVVMAVIADFMLVYLPAPTVSLRPPLSVSAGAIAKFFHGCPDNAFQVALSGTSYSLLQ 273

Query: 245 RCGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGGAEVENVPILSTSVGYGVY 304
           R GAIARNGAKLFAVGTTSSLVGTAVTN +INARKAIDKN  AEVENVPILSTSVGYGVY
Sbjct: 274 RFGAIARNGAKLFAVGTTSSLVGTAVTNTVINARKAIDKNAAAEVENVPILSTSVGYGVY 333

Query: 305 MAVSSNLRYQVLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGV 364
           MAVSSNLRYQVLAGVIEQRILEP+LH+HKLMLSA+CFAVRTGNTFLGSLLWVDYAR IG+
Sbjct: 334 MAVSSNLRYQVLAGVIEQRILEPLLHKHKLMLSALCFAVRTGNTFLGSLLWVDYARFIGI 393

Query: 365 Q 366
           Q
Sbjct: 394 Q 394

[Close]

BLAST of Lsi10G010720 vs. ExPASy TrEMBL
Match: A0A6J1DHS6 (protein RETICULATA-RELATED 4, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111020623 PE=3 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 2.9e-170
Identity = 326/355 (91.83%), Postives = 340/355 (95.77%), Query Frame = 0


Query: 12  FTSSSTGIKATGICLTRRNDRRDLSNRRQLFLVSSF-GGGGADGGDSSSRGGGGGGGDDH 71
           FTSSS+ I A GI LTRR DR DL++RRQLFLVSS  GGGGADGG+SSS GGGGGGGDDH
Sbjct: 41  FTSSSSSINANGIFLTRRYDRCDLNSRRQLFLVSSSGGGGGADGGNSSSHGGGGGGGDDH 100

Query: 72  GDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELEKSAL 131
           G++GDS NAGDKN+A+ALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLEL+KSAL
Sbjct: 101 GNKGDSDNAGDKNRADALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELQKSAL 160

Query: 132 MRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVM 191
            RWLMQFGGFKERLLADDLFLAKV MECGVGVFTKTAAEYERRREKFFDELEIVFADVVM
Sbjct: 161 FRWLMQFGGFKERLLADDLFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADVVM 220

Query: 192 AIIADFMLVYLPAPTVSLRPPLSVSAGAITRFFHGCPDNAFQVALSGTSYSLLQRCGAIA 251
           AIIADFMLVYLPAPTVSLRPPLSVSAGAITRFFHGCPDNAFQVALSGTSYSLLQR G+IA
Sbjct: 221 AIIADFMLVYLPAPTVSLRPPLSVSAGAITRFFHGCPDNAFQVALSGTSYSLLQRFGSIA 280

Query: 252 RNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGGAEVENVPILSTSVGYGVYMAVSSN 311
           RNGAKLFAVGTTSSLVGTAVTNALINARKAIDK+  AEVENVPI++TSVGYGVYMAVSSN
Sbjct: 281 RNGAKLFAVGTTSSLVGTAVTNALINARKAIDKDAAAEVENVPIVATSVGYGVYMAVSSN 340

Query: 312 LRYQVLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 366
           LRYQVLAGVIEQRILEPMLHQHK+MLSAICFAVRTGNTFLGSLLWVDYARLIGVQ
Sbjct: 341 LRYQVLAGVIEQRILEPMLHQHKVMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 395

[Close]

BLAST of Lsi10G010720 vs. NCBI nr
Match: XP_004140210.1 (protein RETICULATA-RELATED 4, chloroplastic [Cucumis sativus] >KGN48118.1 hypothetical protein Csa_003078 [Cucumis sativus])

HSP 1 Score: 640.2 bits (1650), Expect = 1.1e-179
Identity = 339/357 (94.96%), Postives = 348/357 (97.48%), Query Frame = 0


Query: 9   SLVFTSSSTGIKATGICLTRRNDRRDLSNRRQLFLVSSFGGGGADGGDSSSRGGGGGGGD 68
           S VFTSSSTGIKA G+ LT RNDRRDLSNRRQLFLVSSFGGGG DGGDSSSRGGGGGGGD
Sbjct: 38  SPVFTSSSTGIKANGLSLTCRNDRRDLSNRRQLFLVSSFGGGGDDGGDSSSRGGGGGGGD 97

Query: 69  DHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELEKS 128
           DHGDEGDSGNAGDKNKAEALLVLAEAG+SLE LPKDLA AIEAGRIPGSVVTKFLEL+KS
Sbjct: 98  DHGDEGDSGNAGDKNKAEALLVLAEAGQSLESLPKDLAVAIEAGRIPGSVVTKFLELQKS 157

Query: 129 ALMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADV 188
           A+MRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADV
Sbjct: 158 AIMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADV 217

Query: 189 VMAIIADFMLVYLPAPTVSLRPPLSVSAGAITRFFHGCPDNAFQVALSGTSYSLLQRCGA 248
           VMAIIADFMLVYLPAPTVSLRPPLSV+AGAIT+FFHGCPDNAFQ+ALSGTSYSLLQR GA
Sbjct: 218 VMAIIADFMLVYLPAPTVSLRPPLSVNAGAITKFFHGCPDNAFQIALSGTSYSLLQRFGA 277

Query: 249 IARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGGAEVENVPILSTSVGYGVYMAVS 308
           IARNGAKLFAVGTTSSLVGTA TNALINARKAIDKNGGAEVENVPILSTSVGYGVYMAVS
Sbjct: 278 IARNGAKLFAVGTTSSLVGTAATNALINARKAIDKNGGAEVENVPILSTSVGYGVYMAVS 337

Query: 309 SNLRYQVLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 366
           SNLRYQV+AGVIEQRILEPMLHQHKL+LSAICFAVRTGNTFLGSLLWVDYARLIGVQ
Sbjct: 338 SNLRYQVVAGVIEQRILEPMLHQHKLLLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 394

[Close]

BLAST of Lsi10G010720 vs. NCBI nr
Match: XP_008449693.1 (PREDICTED: protein RETICULATA-RELATED 4, chloroplastic-like [Cucumis melo] >ADN33922.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 633.3 bits (1632), Expect = 1.3e-177
Identity = 339/360 (94.17%), Postives = 347/360 (96.39%), Query Frame = 0


Query: 9   SLVFTSSSTGIKATGICLTRRNDRRDLSNRRQLFLVSSF---GGGGADGGDSSSRGGGGG 68
           S VF SSSTGIKA G+ LT RNDRRDLSNRR+LFLVSSF   GGGGADGGDSSSRGGGGG
Sbjct: 38  SPVFNSSSTGIKANGLSLTCRNDRRDLSNRRELFLVSSFGGGGGGGADGGDSSSRGGGGG 97

Query: 69  GGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLEL 128
           GGDDHGD+GDSGNAGDKNKAEALLVLAEAG SLECLPKDLA AIEAGRIPGSVVTKFLEL
Sbjct: 98  GGDDHGDQGDSGNAGDKNKAEALLVLAEAGWSLECLPKDLAVAIEAGRIPGSVVTKFLEL 157

Query: 129 EKSALMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVF 188
           +KSALMRWLMQFGGFKERLLADDLFLAKV MECGVGVFTKTAAEYERRREKFFDELEIVF
Sbjct: 158 QKSALMRWLMQFGGFKERLLADDLFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVF 217

Query: 189 ADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITRFFHGCPDNAFQVALSGTSYSLLQR 248
           ADVVMAIIADFMLVYLPAPTVSLRPPLSV+AGAIT+FFHGCPDNAFQVALSGTSYSLLQR
Sbjct: 218 ADVVMAIIADFMLVYLPAPTVSLRPPLSVNAGAITKFFHGCPDNAFQVALSGTSYSLLQR 277

Query: 249 CGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGGAEVENVPILSTSVGYGVYM 308
            G+IARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNG AEVENVPILSTSVGYGVYM
Sbjct: 278 FGSIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGAAEVENVPILSTSVGYGVYM 337

Query: 309 AVSSNLRYQVLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 366
           AVSSNLRYQVLAGVIEQRILEPMLHQHKL+LSAICFAVRTGNTFLGSLLWVDYARLIGVQ
Sbjct: 338 AVSSNLRYQVLAGVIEQRILEPMLHQHKLLLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 397

[Close]

BLAST of Lsi10G010720 vs. NCBI nr
Match: XP_038902253.1 (protein RETICULATA-RELATED 4, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 629.8 bits (1623), Expect = 1.5e-176
Identity = 341/357 (95.52%), Postives = 342/357 (95.80%), Query Frame = 0


Query: 9   SLVFTSSSTGIKATGICLTRRNDRRDLSNRRQLFLVSSFGGGGADGGDSSSRGGGGGGGD 68
           S V  SSSTGIKA GI LTRR D RDLSNRRQLFLVSSFGGGGADGG SS   GGGGGGD
Sbjct: 38  SPVLASSSTGIKANGIFLTRRYDCRDLSNRRQLFLVSSFGGGGADGGGSSR--GGGGGGD 97

Query: 69  DHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELEKS 128
           DHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELEKS
Sbjct: 98  DHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELEKS 157

Query: 129 ALMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADV 188
           ALMRWLMQFGGFKERLLADDLFLAKV MECGVGVFTKTAAEYERRREKFFDELEIVFADV
Sbjct: 158 ALMRWLMQFGGFKERLLADDLFLAKVAMECGVGVFTKTAAEYERRREKFFDELEIVFADV 217

Query: 189 VMAIIADFMLVYLPAPTVSLRPPLSVSAGAITRFFHGCPDNAFQVALSGTSYSLLQRCGA 248
           VMAIIADFMLVYLPAPTVSLRPPLSVSAGAIT+FFHGCPDNAFQVALSGTSYSLLQR GA
Sbjct: 218 VMAIIADFMLVYLPAPTVSLRPPLSVSAGAITKFFHGCPDNAFQVALSGTSYSLLQRFGA 277

Query: 249 IARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGGAEVENVPILSTSVGYGVYMAVS 308
           IARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKN  AEVENVPILSTSVGYGVYMAVS
Sbjct: 278 IARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNAAAEVENVPILSTSVGYGVYMAVS 337

Query: 309 SNLRYQVLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 366
           SNLRYQVLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ
Sbjct: 338 SNLRYQVLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 392

[Close]

BLAST of Lsi10G010720 vs. NCBI nr
Match: XP_023532836.1 (protein RETICULATA-RELATED 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 613.2 bits (1580), Expect = 1.4e-171
Identity = 323/361 (89.47%), Postives = 340/361 (94.18%), Query Frame = 0


Query: 5   HNLKSLVFTSSSTGIKATGICLTRRNDRRDLSNRRQLFLVSSFGGGGADGGDSSSRGGGG 64
           H   S  FTS + GIKA G+ LTRR+DR DLSNRR++FLVSS GGGG+DGG+ SSRGGGG
Sbjct: 34  HISASPAFTSLTAGIKANGMFLTRRHDRCDLSNRRRMFLVSSSGGGGSDGGNFSSRGGGG 93

Query: 65  GGGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLE 124
           GGGDDHG+EG SGNAGDKNKAEALLVLAEAGRSLECLPKDL AAIEAGRIPGSV+TKF E
Sbjct: 94  GGGDDHGNEGGSGNAGDKNKAEALLVLAEAGRSLECLPKDLVAAIEAGRIPGSVITKFFE 153

Query: 125 LEKSALMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIV 184
           LEKSA+MRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIV
Sbjct: 154 LEKSAIMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIV 213

Query: 185 FADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITRFFHGCPDNAFQVALSGTSYSLLQ 244
           FADVVMA+IADFMLVYLPAPTVSLRPPLSVSAGAI +FFHGCPDNAFQVALSGTSYSLLQ
Sbjct: 214 FADVVMAVIADFMLVYLPAPTVSLRPPLSVSAGAIAKFFHGCPDNAFQVALSGTSYSLLQ 273

Query: 245 RCGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGGAEVENVPILSTSVGYGVY 304
           R GAIARNGAKLFAVGTTSSLVGTAVTN +INARKAIDKN  AEVENVPILSTSVGYGVY
Sbjct: 274 RFGAIARNGAKLFAVGTTSSLVGTAVTNTVINARKAIDKNAAAEVENVPILSTSVGYGVY 333

Query: 305 MAVSSNLRYQVLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGV 364
           MAVSSNLRYQVLAGVIEQRILEP+LH+HKLMLSA+CFAVRTGNTFLGSLLWVDYAR IG+
Sbjct: 334 MAVSSNLRYQVLAGVIEQRILEPLLHKHKLMLSALCFAVRTGNTFLGSLLWVDYARFIGI 393

Query: 365 Q 366
           Q
Sbjct: 394 Q 394

[Close]

BLAST of Lsi10G010720 vs. NCBI nr
Match: KAG6605925.1 (Protein RETICULATA-RELATED 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 610.9 bits (1574), Expect = 7.1e-171
Identity = 323/364 (88.74%), Postives = 343/364 (94.23%), Query Frame = 0


Query: 5   HNLK---SLVFTSSSTGIKATGICLTRRNDRRDLSNRRQLFLVSSFGGGGADGGDSSSRG 64
           H+L+   S  FTS + GIKA G+ LTRR+DR DLS+RR++FLVSS GGGG+DGG+ SSRG
Sbjct: 31  HHLRISASPAFTSLTAGIKANGMFLTRRHDRCDLSDRRRMFLVSSSGGGGSDGGNFSSRG 90

Query: 65  GGGGGGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTK 124
           GGGGGGDDHG+EG SGNAGDKNKAEALLVLAEAGRSLECLPKDL AAIEAGRIPGSV+TK
Sbjct: 91  GGGGGGDDHGNEGGSGNAGDKNKAEALLVLAEAGRSLECLPKDLVAAIEAGRIPGSVITK 150

Query: 125 FLELEKSALMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDEL 184
           F ELEKSA+MRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDEL
Sbjct: 151 FFELEKSAIMRWLMQFGGFKERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDEL 210

Query: 185 EIVFADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAITRFFHGCPDNAFQVALSGTSYS 244
           EIVFADVVMA+IADFMLVYLPAPTVSLRPPLSVSAGAI +FFHGCPDNAFQVALSGTSYS
Sbjct: 211 EIVFADVVMAVIADFMLVYLPAPTVSLRPPLSVSAGAIAKFFHGCPDNAFQVALSGTSYS 270

Query: 245 LLQRCGAIARNGAKLFAVGTTSSLVGTAVTNALINARKAIDKNGGAEVENVPILSTSVGY 304
           LLQR GAIARNGAKLFAVGTTSSLVGTAVTN +INARKAIDKN  AEVENVPILSTSVGY
Sbjct: 271 LLQRFGAIARNGAKLFAVGTTSSLVGTAVTNTVINARKAIDKNAAAEVENVPILSTSVGY 330

Query: 305 GVYMAVSSNLRYQVLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARL 364
           GVYMAVSSNLRYQVLAGVIEQRILEP+LH+HKLMLSA+CFAVRTGNTFLGSLLWVDYAR 
Sbjct: 331 GVYMAVSSNLRYQVLAGVIEQRILEPLLHKHKLMLSALCFAVRTGNTFLGSLLWVDYARF 390

Query: 365 IGVQ 366
           IG+Q
Sbjct: 391 IGIQ 394

[Close]

BLAST of Lsi10G010720 vs. TAIR 10
Match: AT5G12470.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 478.8 bits (1231), Expect = 3.9e-135
Identity = 253/325 (77.85%), Postives = 286/325 (88.00%), Query Frame = 0


Query: 43  LVSSFGGGGAD--GGDSSSRGGGGGGGDDHGDEGDSGNAGDKNKAEALLVLAEAGRSLEC 102
           L +S G GG+D  GG  S  GGGG GG + GD G      D+N+ EA+L+L E+G  LE 
Sbjct: 60  LSASSGNGGSDNNGGGLSGGGGGGDGGKNDGD-GHGDEDRDRNRNEAMLLLKESGIELES 119

Query: 103 LPKDLAAAIEAGRIPGSVVTKFLELEKSALMRWLMQFGGFKERLLADDLFLAKVGMECGV 162
           LPKDLAAAIEAGRIPGSV+T+FLEL+KSA+MRWLMQFGGF+ERLLADDLF+AK+ MECGV
Sbjct: 120 LPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGV 179

Query: 163 GVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGAIT 222
           G+FTKTAAEYERRRE FF+ELE+VFADV MAIIADFMLVYLPAPTVSLRPPL+++AG I+
Sbjct: 180 GIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGIS 239

Query: 223 RFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVTNALINARKA 282
           +FFH CPDNAFQVALSGTSY+LLQR GAI RNGAKLFAVGTTSSLVGTA+TNA I ARKA
Sbjct: 240 KFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKA 299

Query: 283 IDKNGGAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPMLHQHKLMLSAIC 342
           +D+N   EVE VPI+STSV YGVYMAVSSNLRYQ++AGVIEQR+LEPMLHQHKL LSA+C
Sbjct: 300 VDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRLLEPMLHQHKLALSALC 359

Query: 343 FAVRTGNTFLGSLLWVDYARLIGVQ 366
           FAVRTGNTFLGSLLWVDYARLIG+Q
Sbjct: 360 FAVRTGNTFLGSLLWVDYARLIGIQ 383

[Close]

BLAST of Lsi10G010720 vs. TAIR 10
Match: AT2G40400.1 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 187.6 bits (475), Expect = 1.8e-47
Identity = 109/291 (37.46%), Postives = 166/291 (57.04%), Query Frame = 0


Query: 83  NKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELEKSALMRWLMQ-FGGFK 142
           ++AE   V+  AGR  + LP+D+   ++ G +   ++  F +LE+  L+  L Q F GF+
Sbjct: 410 DRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFR 469

Query: 143 ERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYL 202
           ERLLAD  FL ++ +E  + + T   A+YE+R+E FF+EL+ V  D V A + DF  V+L
Sbjct: 470 ERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWL 529

Query: 203 PAPTVSLRPPLSVSAG-----AITRFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKL 262
           PAPT+S       + G     A+       PDNAFQ +L G  ++L  R  ++   G KL
Sbjct: 530 PAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKL 589

Query: 263 FAVGTTSSLVGTAVTNALINARKAI--DKNGGAEVENVPILSTSVGYGVYMAVSSNLRYQ 322
             VG  SS      +NAL   RK I  +   G + +  P+L T++ YG Y+  SSN+RYQ
Sbjct: 590 AGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQ 649

Query: 323 VLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 366
           ++AG+IE RI + +  Q  L+++ I F VR  N++ G+  W+D AR  G+Q
Sbjct: 650 IIAGLIEHRISDELSSQ-PLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699

[Close]

BLAST of Lsi10G010720 vs. TAIR 10
Match: AT2G40400.2 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 187.6 bits (475), Expect = 1.8e-47
Identity = 109/291 (37.46%), Postives = 166/291 (57.04%), Query Frame = 0


Query: 83  NKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELEKSALMRWLMQ-FGGFK 142
           ++AE   V+  AGR  + LP+D+   ++ G +   ++  F +LE+  L+  L Q F GF+
Sbjct: 410 DRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFR 469

Query: 143 ERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYL 202
           ERLLAD  FL ++ +E  + + T   A+YE+R+E FF+EL+ V  D V A + DF  V+L
Sbjct: 470 ERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWL 529

Query: 203 PAPTVSLRPPLSVSAG-----AITRFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKL 262
           PAPT+S       + G     A+       PDNAFQ +L G  ++L  R  ++   G KL
Sbjct: 530 PAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKL 589

Query: 263 FAVGTTSSLVGTAVTNALINARKAI--DKNGGAEVENVPILSTSVGYGVYMAVSSNLRYQ 322
             VG  SS      +NAL   RK I  +   G + +  P+L T++ YG Y+  SSN+RYQ
Sbjct: 590 AGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNIRYQ 649

Query: 323 VLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 366
           ++AG+IE RI + +  Q  L+++ I F VR  N++ G+  W+D AR  G+Q
Sbjct: 650 IIAGLIEHRISDELSSQ-PLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699

[Close]

BLAST of Lsi10G010720 vs. TAIR 10
Match: AT3G56140.1 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 181.4 bits (459), Expect = 1.3e-45
Identity = 107/291 (36.77%), Postives = 165/291 (56.70%), Query Frame = 0


Query: 83  NKAEALLVLAEAGRSLECLPKDLAAAIEAGRIPGSVVTKFLELEKSALMRWLMQ-FGGFK 142
           ++AE   V+  AGR  + LP D+   ++ G +   V+    +LE+  L+  L Q F GF+
Sbjct: 419 DRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRFQGFR 478

Query: 143 ERLLADDLFLAKVGMECGVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYL 202
           ERLLAD  FL ++ +E  + + T   A+YE+R+E FF+E++ V  D V   + DF  V+L
Sbjct: 479 ERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWL 538

Query: 203 PAPTVSLRPPLSVSAG-----AITRFFHGCPDNAFQVALSGTSYSLLQRCGAIARNGAKL 262
           PAPT+S       + G     A+       PDNAFQ +L+G  ++L  R  ++   G KL
Sbjct: 539 PAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLKL 598

Query: 263 FAVGTTSSLVGTAVTNALINARKAIDKN--GGAEVENVPILSTSVGYGVYMAVSSNLRYQ 322
             VG  SS      +NAL  ARK I        + +  P+L T++ YG ++  S+NLRYQ
Sbjct: 599 AGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQ 658

Query: 323 VLAGVIEQRILEPMLHQHKLMLSAICFAVRTGNTFLGSLLWVDYARLIGVQ 366
           ++AG+IE R+ + +  Q  L+++AI F VRT N++ G+  W+D AR  G+Q
Sbjct: 659 IIAGLIEHRLSDELSSQ-PLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQ 708

[Close]

BLAST of Lsi10G010720 vs. TAIR 10
Match: AT5G22790.1 (reticulata-related 1 )

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-27
Identity = 100/332 (30.12%), Postives = 166/332 (50.00%), Query Frame = 0


Query: 50  GGADGGDSSSRG-GGGGGGDDHGDEG-DSGNAGDKNKAEALL----VLAEAGRSLECLPK 109
           G  DGG +   G GGGGGGD  GD+G D  +  ++ +   +L    V+ E  R    LP+
Sbjct: 108 GNNDGGGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPE 167

Query: 110 DLAAAIEAGRIPGSVVTKFLELEKSALMRWLMQF-----GGFKERLLADDLFLAKVGMEC 169
           D+  A ++  I    + ++L+L+ S    W + F        + R+LAD  FL KVG E 
Sbjct: 168 DMLEAAKSVGIRKLFLLRYLDLQGSV---WPLGFLMRSCAMLRNRMLADPSFLFKVGTEV 227

Query: 170 GVGVFTKTAAEYERRREKFFDELEIVFADVVMAIIADFMLVYLPAPTVSLRPPLSVSAGA 229
            +     T AE ++R E F+ E E+  AD+++ ++ D  LV L AP   +  P   S G 
Sbjct: 228 AIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGL 287

Query: 230 ITRFFHGC---PDNAFQVALSGTSYSLLQRCGAIARNGAKLFAVGTTSSLVGTAVTNALI 289
                  C   P + F+    G  +S+ QR       G    +VG    L+G  + N ++
Sbjct: 288 FKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIANLIM 347

Query: 290 NARKAIDKNGGAEVENVPILSTSVGYGVYMAVSSNLRYQVLAGVIEQRILEPMLHQHKLM 349
            A++++ K    +V   P+  ++  +GV++ +SSN RYQ++ G+  +R++E      ++ 
Sbjct: 348 TAKRSV-KKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGL--ERVVEGSTAAKRIP 407

Query: 350 LSAICF--AVRTGNTFLGSLLWVDYARLIGVQ 366
           + A+ F   VR  N   G + +VD+A+L GVQ
Sbjct: 408 VVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433

The following BLAST results are available for this feature:

BLAST of Lsi10G010720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CJ5	5.5e-134	77.85	Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9SIY5	2.5e-46	37.46	Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q8RWG3	1.8e-44	36.77	Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9FGP9	2.2e-26	30.12	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
B9DFK5	4.7e-24	30.12	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=...	[more]

BLAST of Lsi10G010720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF11	5.3e-180	94.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434380 PE=3 SV=1	[more]
E5GBT0	6.5e-178	94.17	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3BNJ2	6.5e-178	94.17	protein RETICULATA-RELATED 4, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1K4R1	7.7e-171	88.92	protein RETICULATA-RELATED 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1DHS6	2.9e-170	91.83	protein RETICULATA-RELATED 4, chloroplastic-like OS=Momordica charantia OX=3673 ...	[more]

BLAST of Lsi10G010720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140210.1	1.1e-179	94.96	protein RETICULATA-RELATED 4, chloroplastic [Cucumis sativus] >KGN48118.1 hypoth...	[more]
XP_008449693.1	1.3e-177	94.17	PREDICTED: protein RETICULATA-RELATED 4, chloroplastic-like [Cucumis melo] >ADN3...	[more]
XP_038902253.1	1.5e-176	95.52	protein RETICULATA-RELATED 4, chloroplastic-like [Benincasa hispida]	[more]
XP_023532836.1	1.4e-171	89.47	protein RETICULATA-RELATED 4, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG6605925.1	7.1e-171	88.74	Protein RETICULATA-RELATED 4, chloroplastic, partial [Cucurbita argyrosperma sub...	[more]

BLAST of Lsi10G010720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12470.1	3.9e-135	77.85	Protein of unknown function (DUF3411)	[more]
AT2G40400.1	1.8e-47	37.46	Protein of unknown function (DUF399 and DUF3411)	[more]
AT2G40400.2	1.8e-47	37.46	Protein of unknown function (DUF399 and DUF3411)	[more]
AT3G56140.1	1.3e-45	36.77	Protein of unknown function (DUF399 and DUF3411)	[more]
AT5G22790.1	1.6e-27	30.12	reticulata-related 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021825	Protein RETICULATA-related	PFAM	PF11891	RETICULATA-like	coord: 142..319 e-value: 3.7E-63 score: 212.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..80
None	No IPR available	PANTHER	PTHR31620	PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED	coord: 27..365
None	No IPR available	PANTHER	PTHR31620:SF14	PROTEIN RETICULATA-RELATED 4, CHLOROPLASTIC	coord: 27..365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G010720.1	Lsi10G010720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031969	chloroplast membrane