Lsi10G010660 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G010660
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	cyclin-dependent protein kinase inhibitor SMR13
Location	chr10: 14890340 .. 14890699 (+)
RNA-Seq Expression	Lsi10G010660
Synteny	Lsi10G010660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCTTCAGTAGCAACAATGGCCACAAGAACCAGAAGAAATTTACCCAACTTGAAGCTCACTAAGAAAATCAAGAAGACGAAGAAACAACAGCAGCAGCAGAAGCAGATTCCGGCCGCCACACAAAACGATTTCGTTCAATTTACCGACGACTGTTCTGACATCGACGGCGGCTGCAGCACTCCAAAATCCGAGAGACACAGAATCCCGGAGATTCTGACGTGTCCGCCGGCGCCGAAGAAACCAAGACCCGTTTCCGATTGCTCATTCCGACGATCACCCATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTTGTAGCCCTGCCGGTGCCGGACATTTCAGTCTGA

mRNA sequence

ATGGCCCCTTCAGTAGCAACAATGGCCACAAGAACCAGAAGAAATTTACCCAACTTGAAGCTCACTAAGAAAATCAAGAAGACGAAGAAACAACAGCAGCAGCAGAAGCAGATTCCGGCCGCCACACAAAACGATTTCGTTCAATTTACCGACGACTGTTCTGACATCGACGGCGGCTGCAGCACTCCAAAATCCGAGAGACACAGAATCCCGGAGATTCTGACGTGTCCGCCGGCGCCGAAGAAACCAAGACCCGTTTCCGATTGCTCATTCCGACGATCACCCATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTTGTAGCCCTGCCGGTGCCGGACATTTCAGTCTGA

Coding sequence (CDS)

ATGGCCCCTTCAGTAGCAACAATGGCCACAAGAACCAGAAGAAATTTACCCAACTTGAAGCTCACTAAGAAAATCAAGAAGACGAAGAAACAACAGCAGCAGCAGAAGCAGATTCCGGCCGCCACACAAAACGATTTCGTTCAATTTACCGACGACTGTTCTGACATCGACGGCGGCTGCAGCACTCCAAAATCCGAGAGACACAGAATCCCGGAGATTCTGACGTGTCCGCCGGCGCCGAAGAAACCAAGACCCGTTTCCGATTGCTCATTCCGACGATCACCCATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTTGTAGCCCTGCCGGTGCCGGACATTTCAGTCTGA

Protein sequence

MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQKQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVALPVPDISV

Homology

[Close]

BLAST of Lsi10G010660 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-13
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 58  GGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF 109
           GGC TPK+++ RIPE+LTCPPAPKK R   +C  RR  I FFAPPE+ELFF
Sbjct: 52  GGCCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of Lsi10G010660 vs. ExPASy Swiss-Prot
Match: Q3ECS5 (Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.9e-12
Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 0


Query: 57  DGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVAL 113
           + GC TP  E+ RIPE+LTCPPAPKK +   +C+ RR  IAFFAPP++ELFF  AL
Sbjct: 57  ESGCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFFVFAL 110

[Close]

BLAST of Lsi10G010660 vs. ExPASy TrEMBL
Match: A0A6J1JET4 (cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=LOC111484378 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.6e-45
Identity = 103/123 (83.74%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ----KQIPAATQNDFVQFTDDCSDI 60
           MAPS   MATRTR NLPNLKL KKIKKTKKQQQQQ    KQIPA   ND V FTDDCSDI
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQKLKQIPAVIPNDAVHFTDDCSDI 60

Query: 61  DGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVALPVPD 120
           DGGCSTPK+ER RIPEILTCPPAPKKPRP SDCS RRSPIAFFAPPELEL FF ALPVPD
Sbjct: 61  DGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELEL-FFCALPVPD 120

[Close]

BLAST of Lsi10G010660 vs. ExPASy TrEMBL
Match: A0A6J1FTJ6 (cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita moschata OX=3662 GN=LOC111448665 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43
Identity = 101/123 (82.11%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ----KQIPAATQNDFVQFTDDCSDI 60
           MAPS   MATRTR NLPNLKL KKIKKTKKQQQQQ    KQIPAA  ND V FTDD +DI
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQKLKQIPAAIPNDAVHFTDDSTDI 60

Query: 61  DGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVALPVPD 120
           DGGCSTPK+ER RIP+ILTCPPAPKKPRP SDCS RRSPIAFFAPPELEL FF ALPVPD
Sbjct: 61  DGGCSTPKAERFRIPDILTCPPAPKKPRPSSDCSLRRSPIAFFAPPELEL-FFCALPVPD 120

[Close]

BLAST of Lsi10G010660 vs. ExPASy TrEMBL
Match: A0A0A0L0Q1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291940 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 7.1e-41
Identity = 100/123 (81.30%), Postives = 105/123 (85.37%), Query Frame = 0


Query: 1   MAPSVATMATR-TRRNLPNLKLTKKIKKT--KKQQQQQKQIPA-ATQNDFVQFTDDCSDI 60
           MAPS A MATR TRR LPNLKLTKKIKKT  KKQ  Q+ +IP   TQND V+F D+CS  
Sbjct: 1   MAPSGARMATRTTRRALPNLKLTKKIKKTTNKKQPPQKIEIPVPVTQNDIVEFGDECS-- 60

Query: 61  DGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVALPVPD 120
           DGGCSTPK+ERHRIPEILTCPPAPKKPR VSDCS RRSPIAFFAPPELELFFFVALPVPD
Sbjct: 61  DGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSLRRSPIAFFAPPELELFFFVALPVPD 120

[Close]

BLAST of Lsi10G010660 vs. ExPASy TrEMBL
Match: A0A6J1D3Z6 (cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3673 GN=LOC111017372 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.4e-33
Identity = 85/113 (75.22%), Postives = 94/113 (83.19%), Query Frame = 0


Query: 1   MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQKQIPAATQNDFVQFTDDCSDIDGGC 60
           MAPS   MA RTR N  +LKL KK+KKTKKQQQQ+   P AT+ND VQ ++D  DIDGGC
Sbjct: 1   MAPSGGRMAARTRGNSQSLKL-KKMKKTKKQQQQKLPAP-ATENDVVQCSND--DIDGGC 60

Query: 61  STPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVALP 114
           STP++ER RIPEI+TCPPAPKK RPVSDCSFRRSPIAFFAPPELELFFF ALP
Sbjct: 61  STPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALP 109

[Close]

BLAST of Lsi10G010660 vs. ExPASy TrEMBL
Match: A0A6J1K7R4 (cyclin-dependent protein kinase inhibitor SMR9-like OS=Cucurbita maxima OX=3661 GN=LOC111491400 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 6.0e-32
Identity = 85/117 (72.65%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 8   MATRTRRNLPNLKLTKKIKK--TKKQQQQQKQIPAATQNDFVQFTD---DCSDIDGGCST 67
           MATR RRN+PN KL KK+KK  TKK QQ Q QIP   QND VQF D   D  D+ GG ST
Sbjct: 1   MATRPRRNIPNSKLNKKMKKTTTKKPQQPQNQIP-PPQNDVVQFPDDDFDNDDVGGGYST 60

Query: 68  PKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVALPVPDISV 120
           PK+ER RIPEILTCPP PKK RPVSDCSFRRSPIAFFAPPELELFFF++   PDISV
Sbjct: 61  PKAERFRIPEILTCPPGPKKQRPVSDCSFRRSPIAFFAPPELELFFFISR--PDISV 114

[Close]

BLAST of Lsi10G010660 vs. NCBI nr
Match: XP_038902266.1 (cyclin-dependent protein kinase inhibitor SMR13 [Benincasa hispida])

HSP 1 Score: 200.3 bits (508), Expect = 9.4e-48
Identity = 102/112 (91.07%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 8   MATRTRRNLPNLKLTKKIKKTKKQQQQQKQIPAATQNDFVQFTDDCSDIDGGCSTPKSER 67
           MATRTRRNLPNLKLTKKIKKTKK QQQQ QIPA  QND VQFTD+CSD DGGCSTPK+ER
Sbjct: 1   MATRTRRNLPNLKLTKKIKKTKK-QQQQNQIPATVQNDIVQFTDECSDTDGGCSTPKAER 60

Query: 68  HRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVALPVPDISV 120
           HRIPEILTCPPAPKKPR VSDCSFRRSPIAFFAPPELELFFFV+LPVPDISV
Sbjct: 61  HRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVSLPVPDISV 111

[Close]

BLAST of Lsi10G010660 vs. NCBI nr
Match: XP_022986710.1 (cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita maxima])

HSP 1 Score: 190.7 bits (483), Expect = 7.5e-45
Identity = 103/123 (83.74%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ----KQIPAATQNDFVQFTDDCSDI 60
           MAPS   MATRTR NLPNLKL KKIKKTKKQQQQQ    KQIPA   ND V FTDDCSDI
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQKLKQIPAVIPNDAVHFTDDCSDI 60

Query: 61  DGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVALPVPD 120
           DGGCSTPK+ER RIPEILTCPPAPKKPRP SDCS RRSPIAFFAPPELEL FF ALPVPD
Sbjct: 61  DGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELEL-FFCALPVPD 120

[Close]

BLAST of Lsi10G010660 vs. NCBI nr
Match: KAG7010272.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43
Identity = 101/120 (84.17%), Postives = 104/120 (86.67%), Query Frame = 0


Query: 1   MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ-KQIPAATQNDFVQFTDDCSDIDGG 60
           MAPS   MATRTR NLPNLKL KKIKKTKKQQQQ+ KQIPAA  ND V FTDD +DIDGG
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQKLKQIPAAIPNDAVHFTDDSTDIDGG 60

Query: 61  CSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVALPVPDISV 120
           CSTPK+ER RIPEILTCPPAPKKPRP SDCS RRSPIAFFAPPELEL FF ALPVPDISV
Sbjct: 61  CSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELEL-FFCALPVPDISV 119

[Close]

BLAST of Lsi10G010660 vs. NCBI nr
Match: XP_023522908.1 (cyclin-dependent protein kinase inhibitor SMR15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.0 bits (471), Expect = 1.8e-43
Identity = 101/121 (83.47%), Postives = 103/121 (85.12%), Query Frame = 0


Query: 1   MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ--KQIPAATQNDFVQFTDDCSDIDG 60
           MAPS   MATRTR NLPNLKL KKIKKTKKQQQQQ  KQIPA   ND V FTDD +DIDG
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQKLKQIPAVILNDAVHFTDDSTDIDG 60

Query: 61  GCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVALPVPDIS 120
           GCSTPK+ER RIPEILTCPPAPKKPRP SDCS RRSPIAFFAPPELEL FF ALPVPDIS
Sbjct: 61  GCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELEL-FFCALPVPDIS 120

[Close]

BLAST of Lsi10G010660 vs. NCBI nr
Match: XP_022944116.1 (cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita moschata])

HSP 1 Score: 185.3 bits (469), Expect = 3.1e-43
Identity = 101/123 (82.11%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 1   MAPSVATMATRTRRNLPNLKLTKKIKKTKKQQQQQ----KQIPAATQNDFVQFTDDCSDI 60
           MAPS   MATRTR NLPNLKL KKIKKTKKQQQQQ    KQIPAA  ND V FTDD +DI
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQKLKQIPAAIPNDAVHFTDDSTDI 60

Query: 61  DGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVALPVPD 120
           DGGCSTPK+ER RIP+ILTCPPAPKKPRP SDCS RRSPIAFFAPPELEL FF ALPVPD
Sbjct: 61  DGGCSTPKAERFRIPDILTCPPAPKKPRPSSDCSLRRSPIAFFAPPELEL-FFCALPVPD 120

[Close]

BLAST of Lsi10G010660 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 8.6e-15
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 58  GGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF 109
           GGC TPK+++ RIPE+LTCPPAPKK R   +C  RR  I FFAPPE+ELFF
Sbjct: 52  GGCCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of Lsi10G010660 vs. TAIR 10
Match: AT1G51355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 2.8e-13
Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = 0


Query: 57  DGGCSTPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFFFVAL 113
           + GC TP  E+ RIPE+LTCPPAPKK +   +C+ RR  IAFFAPP++ELFF  AL
Sbjct: 57  ESGCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFFVFAL 110

[Close]

BLAST of Lsi10G010660 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.4e-04
Identity = 21/48 (43.75%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 61  STPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF 109
           +TP ++  RIP ++ CPPAPKK +     S+   P  FF+PP+LE  F
Sbjct: 56  TTPTADSVRIPTVIPCPPAPKKRKLTLKVSY--GPREFFSPPDLETVF 101

[Close]

BLAST of Lsi10G010660 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 2.3e-04
Identity = 20/48 (41.67%), Postives = 28/48 (58.33%), Query Frame = 0


Query: 61  STPKSERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF 109
           +TP +   RIP +  CP APKK +P   CS+      +F+PP+LE  F
Sbjct: 57  TTPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

[Close]

BLAST of Lsi10G010660 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 3.1e-04
Identity = 30/96 (31.25%), Postives = 48/96 (50.00%), Query Frame = 0


Query: 16  LPNLKLTKKIKKTKKQQQQQKQIPAATQNDFVQFTDDCSDIDGGCSTPKSERHRIPEILT 75
           +  + +   +K  K + +   +I    + D     ++CS      +TP ++  +IPE+L 
Sbjct: 22  IAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS------TTPTAKETKIPELLE 81

Query: 76  CPPAPKKPRPVSDCSFRRSPIA--FFAPP-ELELFF 109
           CPPAP+K RP   C   RS +   FF PP +LE  F
Sbjct: 82  CPPAPRKRRPALKC---RSNVVREFFTPPSDLETVF 108

The following BLAST results are available for this feature:

BLAST of Lsi10G010660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IWB3	1.2e-13	66.67	Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q3ECS5	3.9e-12	60.71	Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Lsi10G010660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JET4	3.6e-45	83.74	cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FTJ6	1.5e-43	82.11	cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0L0Q1	7.1e-41	81.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291940 PE=4 SV=1	[more]
A0A6J1D3Z6	2.4e-33	75.22	cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3...	[more]
A0A6J1K7R4	6.0e-32	72.65	cyclin-dependent protein kinase inhibitor SMR9-like OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of Lsi10G010660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902266.1	9.4e-48	91.07	cyclin-dependent protein kinase inhibitor SMR13 [Benincasa hispida]	[more]
XP_022986710.1	7.5e-45	83.74	cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita maxima]	[more]
KAG7010272.1	1.1e-43	84.17	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
XP_023522908.1	1.8e-43	83.47	cyclin-dependent protein kinase inhibitor SMR15-like [Cucurbita pepo subsp. pepo...	[more]
XP_022944116.1	3.1e-43	82.11	cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita moschata]	[more]

BLAST of Lsi10G010660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20898.1	8.6e-15	66.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G51355.1	2.8e-13	60.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G60783.1	1.4e-04	43.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10690.1	2.3e-04	41.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G40460.1	3.1e-04	31.25	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR33142:SF8	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 13..112
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 13..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G010660.1	Lsi10G010660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045839	negative regulation of mitotic nuclear division
biological_process	GO:0032875	regulation of DNA endoreduplication
cellular_component	GO:0005634	nucleus