Lsi10G010640 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G010640
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	chaperonin-like RbcX protein 2, chloroplastic
Location	chr10: 14879636 .. 14881021 (-)
RNA-Seq Expression	Lsi10G010640
Synteny	Lsi10G010640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGGAGCTTTGCTTGTTGTCGGTGCGCCGGTGGTCGACTCGCCGCCGTGTCCGTGTTTGTGTTTGGACTCATTGCCGGTTACCAATACAAGTCTCAGAACTGGTGGGGATTTGGTTTTGCAAAGGAAATCTAAGGCTAAGAGTCATTTGGCCGTGTCTCAATCGTTGGATTTGAGAAGTTCGTTTGTCAATTCCGGTGGCGAGTGGCGGCTCTCGGCTGGTGGTGGCCACCGGAGTCGGAGGAACCAACGGAGGAATCGGAGGCTTGTTGTTGTCAATGAATTTGCAGGGCAGTATGAGGACAGTTTTAATGATGTGAAAATGGTATGGATATGATACGACTCTCTTCTTCAATGCAAAATGTTTTGGCTCTTATGGTAACTATTTTGTTTTTGATTTTATGAGCTTAATTTAAAAAATAAAAAACAATAAATGAAATAGTTACCAAACCCGCTTTCATTGTATCATTGTTATCAAATGCTCGTCTCTTCTCCTGGTTCCTGAATGATGAATATTCATGGCACTTGAAATCTGCATTTAAAAAGGGAAGAAAAAATCATTTTACGCTTACAAGAGGCTTTCTATTTGCAGCAAATACAGAATTATTTTACATACAAAGCTGTGAAGACAGTTCTGAATCAGCTTTATGAGATGAACCCTACCCAATACACATGGTTTTATAAGTAAGTGGAGCCTTTCACTTTAGTTTTTAAGAAGTTAATTCATTATGACTGCCAATGTAAATGCTTACTCTCTGGAAATCAAGACACTGTTTCCAGAACATATTCCATTTCTCCACCTAATCTTGAATTTCATTTTTTTTCCCACATCAAACAGCTTTGTTGTAAATCACAAGCCTGGGGAAGGGAAGCGTTTCATCCGAACACTCGTAAAGGTAGTATAACAATCTCTAGAGATGGTAAACCTAAACCAAAGCTTACTTGATTAAGACATAATATCCTCAACCAACACGTTAGGGATTCAAATCCGCACACTCACATGTTAAACTCAAAAGAAAAAGAAAAAAAAGTCTAAAAAAGAGTCTATTTGAGTTACATGAAGGATATGTATATAATTGAGTACTGAACAATAAGATATTGGATGCGTATGTTTATGTGTAACAGGAGAAGCAAGATTTGGCTGAGAGAGTGATGATAACAAGGCTTCATCTCTATAACAAATGGGTTAAGGTAAGAATATGCTTGGTATTTTGAAGACAAATTCTTTGTTGGAACCATTGTAAGAACACATATTGAATTGTGATTTGGTGTTGTTGCATAGAAATGTGATCATGCTGAAATATACAAAGAGATATCTGATGAGAACTTGGAGTTGATGCGAGAGCGACTAATGGAGACTGTGATATGGCCTTCCGACGAGTAG

mRNA sequence

ATGGTGGGAGCTTTGCTTGTTGTCGGTGCGCCGGTGGTCGACTCGCCGCCGTGTCCGTGTTTGTGTTTGGACTCATTGCCGGTTACCAATACAAGTCTCAGAACTGGTGGGGATTTGGTTTTGCAAAGGAAATCTAAGGCTAAGAGTCATTTGGCCGTGTCTCAATCGTTGGATTTGAGAAGTTCGTTTGTCAATTCCGGTGGCGAGTGGCGGCTCTCGGCTGGTGGTGGCCACCGGAGTCGGAGGAACCAACGGAGGAATCGGAGGCTTGTTGTTGTCAATGAATTTGCAGGGCAGTATGAGGACAGTTTTAATGATGTGAAAATGGAGAAGCAAGATTTGGCTGAGAGAGTGATGATAACAAGGCTTCATCTCTATAACAAATGGGTTAAGAAATGTGATCATGCTGAAATATACAAAGAGATATCTGATGAGAACTTGGAGTTGATGCGAGAGCGACTAATGGAGACTGTGATATGGCCTTCCGACGAGTAG

Coding sequence (CDS)

ATGGTGGGAGCTTTGCTTGTTGTCGGTGCGCCGGTGGTCGACTCGCCGCCGTGTCCGTGTTTGTGTTTGGACTCATTGCCGGTTACCAATACAAGTCTCAGAACTGGTGGGGATTTGGTTTTGCAAAGGAAATCTAAGGCTAAGAGTCATTTGGCCGTGTCTCAATCGTTGGATTTGAGAAGTTCGTTTGTCAATTCCGGTGGCGAGTGGCGGCTCTCGGCTGGTGGTGGCCACCGGAGTCGGAGGAACCAACGGAGGAATCGGAGGCTTGTTGTTGTCAATGAATTTGCAGGGCAGTATGAGGACAGTTTTAATGATGTGAAAATGGAGAAGCAAGATTTGGCTGAGAGAGTGATGATAACAAGGCTTCATCTCTATAACAAATGGGTTAAGAAATGTGATCATGCTGAAATATACAAAGAGATATCTGATGAGAACTTGGAGTTGATGCGAGAGCGACTAATGGAGACTGTGATATGGCCTTCCGACGAGTAG

Protein sequence

MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLRSSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNEFAGQYEDSFNDVKMEKQDLAERVMITRLHLYNKWVKKCDHAEIYKEISDENLELMRERLMETVIWPSDE

Homology

[Close]

BLAST of Lsi10G010640 vs. ExPASy Swiss-Prot
Match: Q8L9X2 (Chaperonin-like RbcX protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCX2 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.7e-30
Identity = 89/215 (41.40%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 1   MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLR 60
           MV A  VVG+PV+DS   PCLCLD+         T G +      + K  L  +++L+L 
Sbjct: 1   MVSAWFVVGSPVMDSSSSPCLCLDA--------HTTGTI------RRKKILGKARNLELG 60

Query: 61  SSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNE-FAGQYEDSFNDVK----------- 120
           SSF  S   +RLS      SR   R++++L++VNE  AG Y+D+F DV+           
Sbjct: 61  SSFTGSRIVFRLSP--KRVSRIANRKSKKLLIVNEDVAGNYDDTFGDVQKQIVNYFTYKA 120

Query: 121 ---------------------------------------MEKQDLAERVMITRLHLYNKW 165
                                                   E Q+LAERVMITRLHLY KW
Sbjct: 121 VRTVLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKESQELAERVMITRLHLYGKW 180

[Close]

BLAST of Lsi10G010640 vs. ExPASy TrEMBL
Match: A0A6J1FUS7 (chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111448989 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 145/214 (67.76%), Postives = 154/214 (71.96%), Query Frame = 0


Query: 1   MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLR 60
           MVGAL V GAPV+DSPPCPCLCLDS PVTN SLR+ GDLVL R+SKAKSHLAVS+ +DLR
Sbjct: 1   MVGALCVAGAPVIDSPPCPCLCLDSSPVTNMSLRSRGDLVLPRRSKAKSHLAVSRLVDLR 60

Query: 61  SSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNEFAGQYEDSFNDVKM----------- 120
           SSFVNSG EW+LSA GGHR RRNQRRNRRLVVVNEFAGQYE+SF+DVKM           
Sbjct: 61  SSFVNSGSEWQLSASGGHRRRRNQRRNRRLVVVNEFAGQYEESFDDVKMQILNYFTYKAV 120

Query: 121 ---------------------------------------EKQDLAERVMITRLHLYNKWV 165
                                                  EKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYDFVVNHKPRDGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

[Close]

BLAST of Lsi10G010640 vs. ExPASy TrEMBL
Match: A0A0A0KX19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291920 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.7e-64
Identity = 143/214 (66.82%), Postives = 152/214 (71.03%), Query Frame = 0


Query: 1   MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLR 60
           MVGAL VVGAPVVDS P PCL  DS PVTN SLR+GGDLVLQRKSKAKS+L VS+S+DLR
Sbjct: 1   MVGALFVVGAPVVDSLP-PCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLR 60

Query: 61  SSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNEFAGQYEDSFNDVKM----------- 120
           SSFVN G EW+LSAGGG +S+RNQRRNRRLVVVNEFAGQYEDSF+DVKM           
Sbjct: 61  SSFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120

Query: 121 ---------------------------------------EKQDLAERVMITRLHLYNKWV 165
                                                  EKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

[Close]

BLAST of Lsi10G010640 vs. ExPASy TrEMBL
Match: A0A5A7TJ10 (RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00620 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.8e-64
Identity = 141/214 (65.89%), Postives = 150/214 (70.09%), Query Frame = 0


Query: 1   MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLR 60
           MVGAL VVGAPV+DSPP PC   DS PVTN SLR+GGDLVLQRKSK KS+  VS+S+DLR
Sbjct: 1   MVGALFVVGAPVIDSPP-PCFSFDSSPVTNMSLRSGGDLVLQRKSKTKSYSTVSKSVDLR 60

Query: 61  SSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNEFAGQYEDSFNDVKM----------- 120
           SSFVN G EW+LSAGG  RSRRNQRRNRRLV+VNEFAGQYEDSF+DVKM           
Sbjct: 61  SSFVNFGDEWQLSAGGCRRSRRNQRRNRRLVIVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120

Query: 121 ---------------------------------------EKQDLAERVMITRLHLYNKWV 165
                                                  EKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

[Close]

BLAST of Lsi10G010640 vs. ExPASy TrEMBL
Match: A0A5D3BAI6 (RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001050 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.4e-63
Identity = 140/214 (65.42%), Postives = 150/214 (70.09%), Query Frame = 0


Query: 1   MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLR 60
           MVGAL VVGAPV+DSPP PC   DS PVTN SLR+GGDLVLQRKSK KS+  VS+S+DLR
Sbjct: 1   MVGALFVVGAPVIDSPP-PCFSFDSSPVTNMSLRSGGDLVLQRKSKTKSYSTVSKSVDLR 60

Query: 61  SSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNEFAGQYEDSFNDVKM----------- 120
           SSFVN G EW+LSAGG  +SRRNQRRNRRLV+VNEFAGQYEDSF+DVKM           
Sbjct: 61  SSFVNFGDEWQLSAGGCRQSRRNQRRNRRLVIVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120

Query: 121 ---------------------------------------EKQDLAERVMITRLHLYNKWV 165
                                                  EKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

[Close]

BLAST of Lsi10G010640 vs. ExPASy TrEMBL
Match: A0A1S3BNA7 (uncharacterized protein LOC103491510 OS=Cucumis melo OX=3656 GN=LOC103491510 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.4e-63
Identity = 140/214 (65.42%), Postives = 150/214 (70.09%), Query Frame = 0


Query: 1   MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLR 60
           MVGAL VVGAPV+DSPP PC   DS PVTN SLR+GGDLVLQRKSK KS+  VS+S+DLR
Sbjct: 1   MVGALFVVGAPVIDSPP-PCFSFDSSPVTNMSLRSGGDLVLQRKSKTKSYSTVSKSVDLR 60

Query: 61  SSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNEFAGQYEDSFNDVKM----------- 120
           SSFVN G EW+LSAGG  +SRRNQRRNRRLV+VNEFAGQYEDSF+DVKM           
Sbjct: 61  SSFVNFGDEWQLSAGGCRQSRRNQRRNRRLVIVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120

Query: 121 ---------------------------------------EKQDLAERVMITRLHLYNKWV 165
                                                  EKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

[Close]

BLAST of Lsi10G010640 vs. NCBI nr
Match: XP_023512052.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.6 bits (688), Expect = 1.7e-68
Identity = 145/214 (67.76%), Postives = 154/214 (71.96%), Query Frame = 0


Query: 1   MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLR 60
           MVGAL V GAPV+DSPPCPCLCLDS PVTN SLR+ GDLVL R+SKAKSHLAVS+ +DLR
Sbjct: 1   MVGALFVAGAPVIDSPPCPCLCLDSSPVTNMSLRSRGDLVLPRRSKAKSHLAVSRLVDLR 60

Query: 61  SSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNEFAGQYEDSFNDVKM----------- 120
           SSFVNSG EW+LSA GGHR RRNQRRNRRLVVVNEFAGQYE+SF+DVKM           
Sbjct: 61  SSFVNSGSEWQLSASGGHRRRRNQRRNRRLVVVNEFAGQYEESFDDVKMQILNYFTYKAV 120

Query: 121 ---------------------------------------EKQDLAERVMITRLHLYNKWV 165
                                                  EKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYDFVVNHKPRDGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

[Close]

BLAST of Lsi10G010640 vs. NCBI nr
Match: XP_022944576.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 269.2 bits (687), Expect = 2.3e-68
Identity = 145/214 (67.76%), Postives = 154/214 (71.96%), Query Frame = 0


Query: 1   MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLR 60
           MVGAL V GAPV+DSPPCPCLCLDS PVTN SLR+ GDLVL R+SKAKSHLAVS+ +DLR
Sbjct: 1   MVGALCVAGAPVIDSPPCPCLCLDSSPVTNMSLRSRGDLVLPRRSKAKSHLAVSRLVDLR 60

Query: 61  SSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNEFAGQYEDSFNDVKM----------- 120
           SSFVNSG EW+LSA GGHR RRNQRRNRRLVVVNEFAGQYE+SF+DVKM           
Sbjct: 61  SSFVNSGSEWQLSASGGHRRRRNQRRNRRLVVVNEFAGQYEESFDDVKMQILNYFTYKAV 120

Query: 121 ---------------------------------------EKQDLAERVMITRLHLYNKWV 165
                                                  EKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYDFVVNHKPRDGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

[Close]

BLAST of Lsi10G010640 vs. NCBI nr
Match: KAG7010270.1 (Chaperonin-like RbcX protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.7 bits (683), Expect = 6.6e-68
Identity = 145/214 (67.76%), Postives = 153/214 (71.50%), Query Frame = 0


Query: 1   MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLR 60
           MVGAL V GAPV+DSPPCPCLCLDS PVTN SLR+ GDLVL R+SKAKSHLAVSQ +DLR
Sbjct: 1   MVGALCVAGAPVIDSPPCPCLCLDSSPVTNMSLRSRGDLVLPRRSKAKSHLAVSQLVDLR 60

Query: 61  SSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNEFAGQYEDSFNDVKM----------- 120
           SSFVNSG EW+LSA GGHR RRNQRRN RLVVVNEFAGQYE+SF+DVKM           
Sbjct: 61  SSFVNSGSEWQLSASGGHRRRRNQRRNWRLVVVNEFAGQYEESFDDVKMQILNYFTYKAV 120

Query: 121 ---------------------------------------EKQDLAERVMITRLHLYNKWV 165
                                                  EKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYDFVVNHKPRDGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

[Close]

BLAST of Lsi10G010640 vs. NCBI nr
Match: XP_038902700.1 (chaperonin-like RbcX protein 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-66
Identity = 147/214 (68.69%), Postives = 154/214 (71.96%), Query Frame = 0


Query: 1   MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLR 60
           MVGAL VVGAPVVDSPPCP LC DS PVT TSLR+GGDLVLQRKS   SHLAVS+S+DLR
Sbjct: 1   MVGALFVVGAPVVDSPPCPSLCSDSSPVTITSLRSGGDLVLQRKS---SHLAVSKSVDLR 60

Query: 61  SSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNEFAGQYEDSFNDVKM----------- 120
           SSFVNS GEWRLSA GG+RSRRNQRRNRRLVVVNEFAGQYEDSF+DVKM           
Sbjct: 61  SSFVNSAGEWRLSASGGNRSRRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120

Query: 121 ---------------------------------------EKQDLAERVMITRLHLYNKWV 165
                                                  EKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

[Close]

BLAST of Lsi10G010640 vs. NCBI nr
Match: XP_004142113.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucumis sativus] >KGN54180.1 hypothetical protein Csa_018190 [Cucumis sativus])

HSP 1 Score: 254.2 bits (648), Expect = 7.6e-64
Identity = 143/214 (66.82%), Postives = 152/214 (71.03%), Query Frame = 0


Query: 1   MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLR 60
           MVGAL VVGAPVVDS P PCL  DS PVTN SLR+GGDLVLQRKSKAKS+L VS+S+DLR
Sbjct: 1   MVGALFVVGAPVVDSLP-PCLSFDSSPVTNMSLRSGGDLVLQRKSKAKSYLTVSKSVDLR 60

Query: 61  SSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNEFAGQYEDSFNDVKM----------- 120
           SSFVN G EW+LSAGGG +S+RNQRRNRRLVVVNEFAGQYEDSF+DVKM           
Sbjct: 61  SSFVNLGDEWQLSAGGGRQSKRNQRRNRRLVVVNEFAGQYEDSFDDVKMQIQNYFTYKAV 120

Query: 121 ---------------------------------------EKQDLAERVMITRLHLYNKWV 165
                                                  EKQDLAERVMITRLHLYNKWV
Sbjct: 121 KTVLNQLYEMNPTQYRWFYNFVVNHKPGEGKRFIRTLVKEKQDLAERVMITRLHLYNKWV 180

[Close]

BLAST of Lsi10G010640 vs. TAIR 10
Match: AT5G19855.1 (Chaperonin-like RbcX protein )

HSP 1 Score: 131.3 bits (329), Expect = 6.9e-31
Identity = 89/215 (41.40%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 1   MVGALLVVGAPVVDSPPCPCLCLDSLPVTNTSLRTGGDLVLQRKSKAKSHLAVSQSLDLR 60
           MV A  VVG+PV+DS   PCLCLD+         T G +      + K  L  +++L+L 
Sbjct: 1   MVSAWFVVGSPVMDSSSSPCLCLDA--------HTTGTI------RRKKILGKARNLELG 60

Query: 61  SSFVNSGGEWRLSAGGGHRSRRNQRRNRRLVVVNE-FAGQYEDSFNDVK----------- 120
           SSF  S   +RLS      SR   R++++L++VNE  AG Y+D+F DV+           
Sbjct: 61  SSFTGSRIVFRLSP--KRVSRIANRKSKKLLIVNEDVAGNYDDTFGDVQKQIVNYFTYKA 120

Query: 121 ---------------------------------------MEKQDLAERVMITRLHLYNKW 165
                                                   E Q+LAERVMITRLHLY KW
Sbjct: 121 VRTVLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKESQELAERVMITRLHLYGKW 180

The following BLAST results are available for this feature:

BLAST of Lsi10G010640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9X2	9.7e-30	41.40	Chaperonin-like RbcX protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Lsi10G010640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUS7	1.1e-68	67.76	chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A0A0KX19	3.7e-64	66.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291920 PE=4 SV=1	[more]
A0A5A7TJ10	4.8e-64	65.89	RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3BAI6	1.4e-63	65.42	RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BNA7	1.4e-63	65.42	uncharacterized protein LOC103491510 OS=Cucumis melo OX=3656 GN=LOC103491510 PE=...	[more]

BLAST of Lsi10G010640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512052.1	1.7e-68	67.76	chaperonin-like RbcX protein 2, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022944576.1	2.3e-68	67.76	chaperonin-like RbcX protein 2, chloroplastic [Cucurbita moschata]	[more]
KAG7010270.1	6.6e-68	67.76	Chaperonin-like RbcX protein 2, chloroplastic [Cucurbita argyrosperma subsp. arg...	[more]
XP_038902700.1	1.2e-66	68.69	chaperonin-like RbcX protein 2, chloroplastic [Benincasa hispida]	[more]
XP_004142113.1	7.6e-64	66.82	chaperonin-like RbcX protein 2, chloroplastic [Cucumis sativus] >KGN54180.1 hypo...	[more]

BLAST of Lsi10G010640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19855.1	6.9e-31	41.40	Chaperonin-like RbcX protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038052	Chaperonin-like RbcX superfamily	GENE3D	1.10.1200.210		coord: 105..164 e-value: 2.6E-16 score: 61.6
IPR038052	Chaperonin-like RbcX superfamily	SUPERFAMILY	158615	RbcX-like	coord: 109..164
None	No IPR available	PANTHER	PTHR33791:SF1	CHAPERONIN-LIKE RBCX PROTEIN 2, CHLOROPLASTIC	coord: 110..164 coord: 1..109
IPR003435	Chaperonin-like RbcX	PANTHER	PTHR33791	FAMILY NOT NAMED	coord: 110..164 coord: 1..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G010640.1	Lsi10G010640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0110102	ribulose bisphosphate carboxylase complex assembly
molecular_function	GO:0044183	protein folding chaperone