
Lsi10G010360 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTTACATGACAATATAAAAAGGTTGATAAGTTTCATGTTCTTGCCCATGACTCTGGTTATCACCAACTTGTTAGTCATTGGTATATTCTTTTTTTAATAATTAACATTATCAAATTATTGATAAGTTTTTCTTTAAGGGGATTTTTTTATTTTACAGGCTGAGAACTCATTGTTGTGTGGAGCCTTACATTATCGCTACACACAGACAACTAAGTGCAATGCATCCCATTTATAGACTTTTGCATCCCCATTTTCGATATACCATGGCCATCAATGCAGCTGCTCGAGAAACCCTTATCAATGCAGAAGGGCTTTCTCAACAGGAAAACATTCTATGGAAATTAGTTCCCTAATCTATGAGAAACAGTGGCAATTCAACTTAGAAGCTTTACCTGCCGACTTAATTCACAGGTAACTTTATCCTTAATGTCGAAGTTGATAGAAATTCTTATCTCAATTTTATGGAACTACCAATAAAACGACAATGTGATATTTCTAAGTAAATTATAAATTAAAAAACCATTTAAAGAAAACTTAAACTACCAATGTTTCTACTCTCTACTAATATTTAAGGGATTGTATTCAAATAGGTTGATACCCTCATCATACAAATATAAATTTCAAAAAGAAAAGAAGACCTCGTATGTTAAAGTTTTTTTGGTTTATTTAGTATAATTAAGGGTAGGAGGATTCAAACGATTGACCTCATGGTCAATCATATTTTAAACGACGTTTGTAGTAAGAATGACATGATAAATAATATTATATTAAGCATGCAGTTTAACAAGTTGTCTTGAGGCCATGATAAATTTATTGTCATTGGATCTTACAGCTTGTCCAAGATCAATTTGTGATTGTTAGATCTTTCGCGTAGGTTCAAGGTCAAATTAGAAACCACTAGATTTGTTTTATGGCCAAGTTTATGTGGACTATAAATAGGTGCATATAAAGTTGAACCCATGCTGACTTGCTATTGATTTGTTAGGCAATTATTAGGAGGCTGATGGGCTACACAAAGATCAACTATGGTTTCCTATTTATTTGTATTGTTTTTGAAAGGGGATTGGCGGTTGAAGATTCAAATGCAGATCACGGTCTAAAGTTGAGTATTGAAGACTACCCTTTTGCCAACGATGGTTTAATCCTTTGGGATGCTATATCAAAGAATGGGCAACAGAATATGTGAATCACTACTATCCAAATCCAAGTGTTGTGAATTCAGATGAGGAACTTAAAGCATGGTGGACAGAAATTCGAAATGTAGGACATGCAGATAAAAAGGATGAACCATGGTGGCCAGTCCTCAACACTCCCAAGCACCTCATTGACATTGTCACAACCATCATGTGGGTTACTTCTGGGCACCACGCTGTTGTTAACTTTGGGCAATACTCTTTTACGGCCAATTATTATCCAATTCGACCTAGTCTTACCAGACTCAACATTCCCACTGAATAACCTAACTCACAACTTTGGAAGTACTTTCTTGAAAATCCAGAAAAAGTGTTTTTAGACACGTTTCCTACGCATTTTCAAGCAACCCTACTTTTGTTCATTTTGAAGATGTTGTTGAGTCATTCTCCAGAAGAGGAGTATTTGGGAGAGGATATGGAAGCAGCATGGGCAGATAAGGGTGTTATAAAAGAAGCATTTCAAAAGTTTAGAGCAAAATTACAAAAATTGGAAGAGATTATCGATGAAAGGAATGCCAATCCTAAATTGAAAAACAGACATGGAAAGTTCCTAATAGTGTTTCCATTTAAAGAACTTCTACAAAGTTAATCTAACCCTTATATATTTAGTCATTCTAATAATTCGTTGTTATTATTTTCTTTAGAAGAATTCATTGTTATTATTAGACCATCTTATATTTAACCCACAAAATATATTTTAGTATAAGTCATTAGTAATAGTTAGGTGCAGTCTACTTTTTTTTTTTTTTTTTTTTCTTTTTAAATGATAAAGTTTTATTAAACAACTGCTTGACCTGGACAAAGTTTAAATCAACAACATCCTCCCAAGTTTTTCTCACAAGCCATTGCTTCGTTATTAGCCATATAATAAGCGTATCATCGTGAATTGTGATCAAGTGTACATCGAACAGCCATTGACACTTTTGTCCTATTTTTCAATCCACAGTAATTCACTTTGTTCTTCACGTGACAACCCATTCCATCATTTTATTTTATTTTTTTGAGAAAATGAACTTCATAATAATTGCTCGTATTTATAAGGAATTCAAAAAGGCATCAAGTTTTTTCAATCCACAATAATTCACTTTTTTTTTTTTTTTTTTGAAGCCATCAAGCTTTTAAATTCAGTGCTTCTAGAAATTGTAATTGTACCATTCATAATCCTTCAAAAAAAATAAACTGTACCATTCATAATTATTGCTCGTATTTATAAGGAAGGTAAGAAATGTACGTTTCATAAAATAAAAGATTAAATAAAGATTAAATTATAGAAAATATCTCTCAACTTTACCATGTTTCAATAATATACTCCCAAACATTTAAATTTTGTATTAATACCTTCAATTTTTGTAAAAAAAAAAAAGGTAAAAAATACTTTTTTTTTCTCTCTTTTCAAATATAGTAAAATGAGTCGACTTAATTATAAATATAGCAAAAAATTTTAGACATCTATCAGTATCTATCACTAACAAACAATGATAAATGATGTAGTCTATTACTATCTATCACTGATAGACAGTGACATTTTACTACATTTGAAAATATTTCCAACAGTTTTGCCATTTAAAACAATTACTGTTTTTCCTTTTACAATAAGTTCAGAACTAGTCTCTTATTGTTAGTATTACGGATGAAAATTGTTTATGTACTCCCTATTTACCTCGCTCTTTCATTTTCTCTTACTCATTTGTTTCAAATACATATGTTTTGGTTTTTGTGCTCTTAAAAGTGATTAGTACCTTCATGTGTTATTTCTTTTCTTTTTTTTCAACCACACTTTTAATATTGTTGGGTTTTATGTTCTAAATTTCATAGTCTCTAAATTATAAACAAATTATTGAATAAATAAAAGTACTATTTATTTTCCATTAAATACAATGTTATTTATAATTTGCATAACTTAAATCTAATAAACTAAGATTCAAGGTCATTTAATGTAACTTCAACGATATGTAGTAGACATACAAGTGGATCGTATGTTCAAGCATCAACCTAAAAGGTCTGCAATATATGGATAAAGTTAGGTGCCTTATCCTGGTGTTACTGCGGATATGACCCACTTTGCAATTGTTACAAGAGTTGTAAGTGTTACAAACAATTTGATCCAAATTGTTCATGTGCAGACATGCAAGTAGGGATATCCTATGCAATGAGATTGTATAAGACTAGACCACAAAATATATAATCTCTCTTTGTAACACTATTAAGTGAAGAAATTAACATTTCAAACGATGACCATGTAACTCAATCTCAATCCTGAGTGAGTTATGAACTCCTGCTCATAAGGGCCGCCCTTTAATTTGTGTGGGTGAGAGTGGCCCCAGATGCGAACTCAATATGTCTACCATTTTAGAGACGATGCCAAGTGAAAAGCTGGGAACATAACTACACAAGATGAAATTCACTCATTCCCACCTTTAGGGAAGTAGATATGTGTTGTTCCCTTAACTGCTTACTCTGGGACTTGAACAATGAGGGGTCACCCTCTCACTGGCCCGAGAGGGATTTAGTTTATGGTTGGACCATAAACAGATTGTTCATTAGAGGATCAGTGGTACTTAAGGAGAAAGAGGTACTCATAGGGATAAAATCGTAATTTGACCTAACTGTAATTACGAACAACTTGTGAAGGATTGACTTATGTCTAATGGTTAATTCAATGCATACAGAAATATTTTACAGTTCATAAAAGTGCAACTATTGGTCTTTAGTGGTATGCCCCATAGTTAATGAAGGTGGATTAATATAATTAAAGAGTTTAATTAATAAATCTTGAATCATTAGAGCTTATAATTGTAGGTCCATTAGGTTCTTCGGCTAGCTCACAACAGGTTAAACAAGGATATTAAGTGTTGAAAGAATTTAAAATGTTCAAATTGATTAAGGGAAATTAATATGAATTGGATTATATTAAAACTATAGATTATAATTAATGTGAATGAGATTCATATTAAAACTATAGGTTAAGAGAGAGAAGCATATTTGAATATGATTCAAATATAAGGTTAAACTAAATATATGATATTCGCCAACCCAAAGTCTGCAATTCGTGCGGTATAAGAGTCATCCAGAAGGATGTTTTGAGGCTTAATATCACAATGAATGGTCTGAGTAATGCACCCTTCATGTAGATAATATAGTCCTCTGGCCGTCTCTAAAACAAGTTTAATTCTAACATACCATTTTGGTTTCGAATTCCCAAAAATGAAATCTGCAAGAGACCCATTATGCATAAACTCATACACCAACATTCTGTGTTCTCCTTCATTGCAGAAACCAAGCAATCGAACTAAGTTCTTGTGGTTTGTTCGAGCAATGGTGCTCACTTCAGCCTTAAATTCTTGGTCTCCTTCTCCTACCACATTATTGAACTTTTTAATAGCCACCAAGTTCTTCTTGTCCTCAGTGTCAATAATCCCTTTATAAACAGTAGAAAAGAGCCATGCCCCAACTGCTGGATGAATCCACTTGTGGCCTTGTTAAGCTCTTCATAGCTAAAGATCCTCAAATTCACACCTAA ATGGAGCTGAGAACTCATTGTTGTGTGGAGCCTTACATTATCGCTACACACAGACAACTAAGTGCAATGCATCCCATTTATAGACTTTTGCATCCCCATTTTCGATATACCATGGCCATCAATGCAGCTGCTCGAGAAACCCTTATCAATGCAGAAGGGCTTTCTCAACAGGAAAACATTCTATGGAAATTATGGCAATTCAACTTAGAAGCTTTACCTGCCGACTTAATTCACAGGGGATTGGCGGTTGAAGATTCAAATGCAGATCACGGTCTAAAGTTGAGTATTGAAGACTACCCTTTTGCCAACGATGAATGGGCAACAGAATATGTGAATCACTACTATCCAAATCCAAGTGTTGTGAATTCAGATGAGGAACTTAAAGCATGGTGGACAGAAATTCGAAATGTAGGACATGCAGATAAAAAGGATGAACCATGGTGGCCAGTCCTCAACACTCCCAAGCACCTCATTGACATTGTCACAACCATCATGTGGGTTACTTCTGGGCACCACGCTATGTTGTTGAGTCATTCTCCAGAAGAGGAGTATTTGGGAGAGGATATGGAAGCAGCATGGGCAGATAAGGGTGTTATAAAAGAAGCATTTCAAAAGTTTAGAGCAAAATTACAAAAATTGGAAGAGATTATCGATGAAAGGAATGCCAATCCTAAATTGAAAAACAGACATGGAAAGTTCCTAATAGTGTTTCCATTTAAAGAACTTCTACAAACCATCAAGCTTTTAAATTCAGTGCTTCTAGAAATTAAAAGAGCCATGCCCCAACTGCTGGATGAATCCACTTGTGGCCTTGTTAAGCTCTTCATAGCTAAAGATCCTCAAATTCACACCTAA ATGGAGCTGAGAACTCATTGTTGTGTGGAGCCTTACATTATCGCTACACACAGACAACTAAGTGCAATGCATCCCATTTATAGACTTTTGCATCCCCATTTTCGATATACCATGGCCATCAATGCAGCTGCTCGAGAAACCCTTATCAATGCAGAAGGGCTTTCTCAACAGGAAAACATTCTATGGAAATTATGGCAATTCAACTTAGAAGCTTTACCTGCCGACTTAATTCACAGGGGATTGGCGGTTGAAGATTCAAATGCAGATCACGGTCTAAAGTTGAGTATTGAAGACTACCCTTTTGCCAACGATGAATGGGCAACAGAATATGTGAATCACTACTATCCAAATCCAAGTGTTGTGAATTCAGATGAGGAACTTAAAGCATGGTGGACAGAAATTCGAAATGTAGGACATGCAGATAAAAAGGATGAACCATGGTGGCCAGTCCTCAACACTCCCAAGCACCTCATTGACATTGTCACAACCATCATGTGGGTTACTTCTGGGCACCACGCTATGTTGTTGAGTCATTCTCCAGAAGAGGAGTATTTGGGAGAGGATATGGAAGCAGCATGGGCAGATAAGGGTGTTATAAAAGAAGCATTTCAAAAGTTTAGAGCAAAATTACAAAAATTGGAAGAGATTATCGATGAAAGGAATGCCAATCCTAAATTGAAAAACAGACATGGAAAGTTCCTAATAGTGTTTCCATTTAAAGAACTTCTACAAACCATCAAGCTTTTAAATTCAGTGCTTCTAGAAATTAAAAGAGCCATGCCCCAACTGCTGGATGAATCCACTTGTGGCCTTGTTAAGCTCTTCATAGCTAAAGATCCTCAAATTCACACCTAA MELRTHCCVEPYIIATHRQLSAMHPIYRLLHPHFRYTMAINAAARETLINAEGLSQQENILWKLWQFNLEALPADLIHRGLAVEDSNADHGLKLSIEDYPFANDEWATEYVNHYYPNPSVVNSDEELKAWWTEIRNVGHADKKDEPWWPVLNTPKHLIDIVTTIMWVTSGHHAMLLSHSPEEEYLGEDMEAAWADKGVIKEAFQKFRAKLQKLEEIIDERNANPKLKNRHGKFLIVFPFKELLQTIKLLNSVLLEIKRAMPQLLDESTCGLVKLFIAKDPQIHT Homology
BLAST of Lsi10G010360 vs. ExPASy Swiss-Prot
Match: P38418 (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX2 PE=1 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 5.7e-78 Identity = 151/319 (47.34%), Postives = 185/319 (57.99%), Query Frame = 0
BLAST of Lsi10G010360 vs. ExPASy Swiss-Prot
Match: O24370 (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 2.2e-77 Identity = 153/313 (48.88%), Postives = 183/313 (58.47%), Query Frame = 0
BLAST of Lsi10G010360 vs. ExPASy Swiss-Prot
Match: R9WS04 (Lipoxygenase 2, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=LOX2 PE=2 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 6.5e-74 Identity = 149/319 (46.71%), Postives = 185/319 (57.99%), Query Frame = 0
BLAST of Lsi10G010360 vs. ExPASy Swiss-Prot
Match: Q8GSM2 (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.1e-68 Identity = 144/327 (44.04%), Postives = 185/327 (56.57%), Query Frame = 0
BLAST of Lsi10G010360 vs. ExPASy Swiss-Prot
Match: P93184 (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 6.1e-64 Identity = 132/318 (41.51%), Postives = 174/318 (54.72%), Query Frame = 0
BLAST of Lsi10G010360 vs. ExPASy TrEMBL
Match: A0A5A7TIA3 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00220 PE=3 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 1.2e-99 Identity = 199/329 (60.49%), Postives = 214/329 (65.05%), Query Frame = 0
BLAST of Lsi10G010360 vs. ExPASy TrEMBL
Match: A0A1S4DXN0 (Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103491674 PE=3 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 1.2e-99 Identity = 199/329 (60.49%), Postives = 214/329 (65.05%), Query Frame = 0
BLAST of Lsi10G010360 vs. ExPASy TrEMBL
Match: A0A6J1K0X9 (Lipoxygenase OS=Cucurbita maxima OX=3661 GN=LOC111491398 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 2.4e-95 Identity = 190/327 (58.10%), Postives = 208/327 (63.61%), Query Frame = 0
BLAST of Lsi10G010360 vs. ExPASy TrEMBL
Match: A0A6J1H3S4 (Lipoxygenase OS=Cucurbita moschata OX=3662 GN=LOC111459733 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 2.4e-95 Identity = 190/327 (58.10%), Postives = 208/327 (63.61%), Query Frame = 0
BLAST of Lsi10G010360 vs. ExPASy TrEMBL
Match: A0A6J1D4V6 (Lipoxygenase OS=Momordica charantia OX=3673 GN=LOC111017309 PE=3 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 4.7e-91 Identity = 176/313 (56.23%), Postives = 200/313 (63.90%), Query Frame = 0
BLAST of Lsi10G010360 vs. NCBI nr
Match: XP_038900841.1 (linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 376.3 bits (965), Expect = 2.3e-100 Identity = 201/316 (63.61%), Postives = 212/316 (67.09%), Query Frame = 0
BLAST of Lsi10G010360 vs. NCBI nr
Match: XP_016900733.1 (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo]) HSP 1 Score: 372.9 bits (956), Expect = 2.5e-99 Identity = 199/329 (60.49%), Postives = 214/329 (65.05%), Query Frame = 0
BLAST of Lsi10G010360 vs. NCBI nr
Match: KAA0041377.1 (linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]) HSP 1 Score: 372.9 bits (956), Expect = 2.5e-99 Identity = 199/329 (60.49%), Postives = 214/329 (65.05%), Query Frame = 0
BLAST of Lsi10G010360 vs. NCBI nr
Match: XP_004142235.2 (linoleate 13S-lipoxygenase 2-1, chloroplastic isoform X1 [Cucumis sativus] >KAE8649499.1 hypothetical protein Csa_018002 [Cucumis sativus]) HSP 1 Score: 364.4 bits (934), Expect = 9.0e-97 Identity = 195/329 (59.27%), Postives = 213/329 (64.74%), Query Frame = 0
BLAST of Lsi10G010360 vs. NCBI nr
Match: XP_031739579.1 (linoleate 13S-lipoxygenase 2-1, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 364.4 bits (934), Expect = 9.0e-97 Identity = 195/329 (59.27%), Postives = 213/329 (64.74%), Query Frame = 0
BLAST of Lsi10G010360 vs. TAIR 10
Match: AT3G45140.1 (lipoxygenase 2 ) HSP 1 Score: 292.4 bits (747), Expect = 4.0e-79 Identity = 151/319 (47.34%), Postives = 185/319 (57.99%), Query Frame = 0
BLAST of Lsi10G010360 vs. TAIR 10
Match: AT1G17420.1 (lipoxygenase 3 ) HSP 1 Score: 222.6 bits (566), Expect = 3.9e-58 Identity = 119/312 (38.14%), Postives = 166/312 (53.21%), Query Frame = 0
BLAST of Lsi10G010360 vs. TAIR 10
Match: AT1G72520.1 (PLAT/LH2 domain-containing lipoxygenase family protein ) HSP 1 Score: 220.3 bits (560), Expect = 2.0e-57 Identity = 119/312 (38.14%), Postives = 167/312 (53.53%), Query Frame = 0
BLAST of Lsi10G010360 vs. TAIR 10
Match: AT1G67560.1 (PLAT/LH2 domain-containing lipoxygenase family protein ) HSP 1 Score: 219.5 bits (558), Expect = 3.3e-57 Identity = 126/327 (38.53%), Postives = 175/327 (53.52%), Query Frame = 0
BLAST of Lsi10G010360 vs. TAIR 10
Match: AT3G22400.1 (PLAT/LH2 domain-containing lipoxygenase family protein ) HSP 1 Score: 199.5 bits (506), Expect = 3.6e-51 Identity = 113/310 (36.45%), Postives = 154/310 (49.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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