Lsi10G009710 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G009710
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Phytoene synthase
Location	chr10: 14062470 .. 14067420 (+)
RNA-Seq Expression	Lsi10G009710
Synteny	Lsi10G009710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTTTGCCGGGAGTCGAACCCGGGTCTATTGCTTGGAAGGCAATTATCCTAACCGTTGGACTACAAACGCTATTGTTGTTATATTACAAAAATAAAAGTATTGCGTATCTTATTTCATTAATAATAGGGAAAATTACCTTTTTAGTCCCCAAGTTTTGAATAATATGTGCATTTAGTCATCGAGTTTTAAAAATGTACCTTTTTAGTCCCTGAATTTTTAAAATTAGATTTAAGAAGTCCCTAAAATCATTTTTTATTATCATTTAAAATAATTATATGACATTTTAAATTAAAAGAATAATTTTAAAAAATCATCCTCTCTAAAACTATTTTTTTCTAATTTTAAATATCATATAATTATTTTTAAAAAATCAAAGAAAAAAATTTCAAGGACCTTTTAAACCTATTTTAAAAAATTTAGGGACTAAAAAGGTATATTTTGAAAATTTAGGGACCAAATGGATCTATTCTTATAAACTTGGGGACTAAAAAGGTACATTTTTAAAATTCAAGGACCAATTGCACATATTATTTAAAACTTGGAGACTAAAAAGATAATTATCTCTTAATAATATATACATATTTTTTAATTAAATATTTATATCATGAATCACATAAATAATTAAAAGAAAATTGTATTGCATTTCAATAATGGATAAAATCCTAATACAAAGAGTATTGCATGTCAATGAAGATATGTTATTTAATTAAAATCAAATTGTGGGAAACCATTAGATGATTTTATAAAATAAGAGCCATGTTTTAGCTTTAAATATATGGTCTCTTCATGAATCAAGCAAGCCAATTTTTCAATTCTTGTAAGGTTTTCAAGTACCTTTCTGAAATAATTTTTTTTTTTTTTAAAAAAAATTGCATCTTTTCATTTTTGTAAAAGCTACCCCATAAATATTTATAATTTTTTTCGCATAATATATATATATATATATAGTCTAAAATGTACTAAAGTTGACAAAGATAATAAACAAATACGAGTTAAGATCTTGTTATAAATAGCCTACAAAAATCCAAGATATAATCATCAATCTACCTATTGAATATGTTTATCTTAAACAATGAGTTTACTGTTTTATCTCAAGCTACATAAATATGAATAGATATAACATATGTTTCATATTACATATGATTACAGACATCTTAATCGTTAATATTTTCATATATCAATTGTCTATAAAACCAAATACATTGTACACAAATTCATATGCATTTAACTCAGTTTTCTTCCCGTGCTTCATCAAACTAAACAAATATCTTAGGCTCCAATTTGGTAGTCATTTGGTTTTTAATTTTTGAAAATTAAGTCTATTAATTTCCTCTCAATCTCTTAACATGGTTTTTTTTTTTTTCTTGAGTAAAAGAGTTGAATTCTTAGCCAAATTTCAAAAACAATAGTAAGTTTTTAAAAACTACTTTTTCTTTTTTAGTTTTCAAAACTTGGCTTGATTTTTGAAAACATTGGTAGTACATGATAAAGTAGTAAATTTAGAGGTGGAAGAGTATGTGTAGGCTTAATTTTCAAAAACTAAAAACTAAAAACTAAGGTCCCATTTGGTTTTTTGTTTTTTGTTTTTTAAAAATTAACCTTATAGACACTAATTCCACCTCCAAATTTTTTCTTTTTTATCTACTTTTTACCAATGGTCTAAAAAACCAAGCCGAATTTTTAAAACTAAAAGAGTAGCTTTTCAAAACTTGTTTTTGTTTTCGTGCTTAGGATTCAACCATTGTACTTAAAAAATATACAAATCTTTATAAGAAATTGGGAGGAAATAAGCTTAATTTTTAAAAACTAAAAAACGAATTGATTATCAAACGGAACTAAATGGTTACCAAAAAACACCTTAGTTATTTCATTATTACAATATGTATAAATGAAACATTCAAATATAAAAACTTTTCCAATTAACTAATATAATTGGCATCCCAATTCAATATGCATATTATAAATGAAGTAGTTTGAAGTTTTTATGGATTTGAAGGCTGAAAAGCATGTACAAATAGTTGAAGAGTAGAATACAAATACATTAACAATACTTGAAATCTGAAAGAGAAATGAGTTTCTGAAGGGTATCAACATGGATCAAGATTCTAAAACCAAGTCCCAAAAACAAGACAAATTTATTGTACTTTTCCTTCAAACCATTGTTTGTATATTCTAGACAAGGCATTTTCTTTGTCCTGTCCTTACCAGCCCAAAATTCCCAATTTCAATCCTACTCTGTTAATGCCATTGAACTTCATTGGAATATTCCAAAAGAATTGGAGTTATAAAGCTCTTGAATCCCAAACTTCTTCTTGGGTTTTTCTCAAAAGATTTATAAAATGAGTTCTTGTATTTGCATCACACCAAAGCCTAGCATATTCATTACAGAATGCAAAGGAAGGCTTTTTCCAAAACGATTCACAATTATTAAGAGCAGAGGTGGGGTAATTGCAGCTCCCAAAAGCCCTCACATATTAAAGTTTACAACTTTATCAAAACAAGGCATTCCTCTGGCTGATTTGAACGTCGATGAGATCGTCGAAAGACAATCTCAGGCCAACCATTTTTCCAGAGAAGAATCGTGTAAGAAGAAGAAGCTGCAATTTCACCCTTCATTTCTTGAAGAAGCTTATGAGAGTTGCAGGAAAATCTGTGCAGAATATGCCAAGACTTTCTATTTGGGAACTCTGCTGATGACAAAGGAGCGACAGAGAGCAATATGGGCAATATATGGTAAGAGCAAAAGAAAATCACTCAGATGACATTTTTGAAGAGAACCCATTTCAGATAACCCATGAAAGTGAGGAGTTTTGGTCATTTTCCAATCAAAATCTATGAAAAGTTTTCACTTTTTTGGTTTTTCTTCGAGGGAGTTGCAAATAAAGTAATCACGCCCAAAGTATAAGTAGATATGACAAAATTTAGATCTAGCTGTTGAATTCATCCGTGACTATATCGCTAGTAGGAGTCTATCAGAGATAGAATTTATCACTAGTAGGAGTCTATCGATAGAGTTTATCACTGATATATTTGCTATATTTGTAATTCTTTAAAAATGTTGCTACCTATCGTAATTATCTATGAATTTATAGTTTGGTGTAGGAGAACAGATGAACTTGTGGATGGCCCCAATGCTGTGTATATGAATCCAGAAGTTCTTGATCGATGGGAAGAACGTTTGGAAGACATCTTTGAAGGGTGTCCCTATGATTTGCTGGATGCTGCTTTGAGCCGCACAGTATCCAAATTTCCCATAGACATGAAGGTGCTGTCAGTTGGGATAAAAAGTTTTCAGTTTTTCTTTTCTTTTTTTTTTTTGTTTTGTGTGTGTGTTATTGCTGATTTGGGCTCGTTCTTGTTGTTGTGTTCTTTGTTTTTTGAAAGCAGCCTTTCAGAGATATGATTGAAGGCATGAGAATGGACACTAAAAAGTGTCGATATGAGAATTTTGAAGAGTTATATTTGTATTGTTATTATGTGGCTGGAACTGTGGGACTAATGAGTGTCCCTGTTATGGGAATTGCATCTGATTCTTCACTTCCTACTCAGACTATTTACAGTGCTGCTCTCCACTTGGGAATTGGAAATCAACTTACCAATATTCTAAGAGATGTGGGAGAGGAGTAAGCTCTCTCTCCCTCTCCCTCTCCCTCTCACTCTCTCTTACTTCTATTGTTTAGTTATGTTGTTTATGTTGGAATGTCTTGAATATGTTATTTGATGCAATAGCCAAGCACGAGATCTCGCTTTGAAATCTAAGTTGTATTCATAGTTATGTTATTTATGATTTTTGTCCTATGGTTTAGTGGTGTGTGCTATATATAAACTCTTGAAGCCTAGAGGTGCCTAATTTGATATTTTCAATCCCCTCTTTTCTTTGATTCTTTGGAGGCGAACAATCTGATTAACAACTGCTTGGCAGACTTTAATGAGGTAAAGAATGAAGTTGATGAGATTGTTGTTTTAAAAAAGGTAATTGGGAAATGTCTCTTTCTCTTATTGTCATCGTGTTTGCAACCGTGCAGCTCATTGTGTAGCTCGTTTACGCTGCTAGGATTTTATCCTATTTAGGTTTTTTGTTTTTCTTTCAATTCAGAAGCTTTTGGGAGGTGTCGAGAATCTCATTTCCCTAGTTGGGTTTTGGATGTTATTAATGATGACTTTTCTCCTCTGCCTCTCCCTTGAGGTTGAGCGAAGTTAATTTTCCAAAAAAAAAAATGTCATCTTTTCCTCTGCCCATGAATGTAGCTAACACACTATTAGTGCCACATAAATCTCCTTGTCGATTTTTCTACCATTTACGTTTTCTGTTTTCTTTGTTAATTTTATAACGGTTTATATATCTTAATGTTACTTTTTGAACTTGTTTCAGTGCTATGAGAGGTAGGGTATATCTTCCCCAAGATGAGCTTGCACAGTTCGGGTTATGCGACGACGATATATTGGCAATGAGAGTGAATGATAAGTGGAGAGAATTCATGAAAGAACAGATCAAAAGGGCGAGGTTCTATTTCAAACTAGCAGAAAAGGGAGCTTCTCAGCTTGACAAGGCCAGCCGTTGGCCAGTATGGTCATCGTTGATGCTGTACCGAAAAATATTGGAAGCAATTGAAGAAAATGATTACAACAACTTCACAAAGCGAGCTTATGTAAAGAGATCCAAGAAACTTTTCACACTGCCTCTTGCTTACACCAAAGCTATTTCAGCACCAAGTCTAGTCTTCCATTGATTACAGAACCAACAACTTTGGATTGCGTTGCTGTTTCCAAGTACAATAACTTGACAAAGGGAGACTAAAATATTCTCAGTTTCTTAACTTTTTTTTTTTTTATATAGGAAACGATTTCATTGGTGAAAACCCATCAAAAGAGATTGCAAAGGATATCTTCAAATGGTTATTATGAGGAAATTTAAGCTCAAATTCTTAAAAGGGTGGTCCAAATTTC

mRNA sequence

ATGCACAAGGCATTTTCTTTGTCCTGTCCTTACCAGCCCAAAATTCCCAATTTCAATCCTACTCTGTTAATGCCATTGAACTTCATTGGAATATTCCAAAAGAATTGGAGTTATAAAGCTCTTGAATCCCAAACTTCTTCTTGGATTTATAAAATGAGTTCTTGTATTTGCATCACACCAAAGCCTAGCATATTCATTACAGAATGCAAAGGAAGGCTTTTTCCAAAACGATTCACAATTATTAAGAGCAGAGGTGGGGTAATTGCAGCTCCCAAAAGCCCTCACATATTAAAGTTTACAACTTTATCAAAACAAGGCATTCCTCTGGCTGATTTGAACGTCGATGAGATCGTCGAAAGACAATCTCAGGCCAACCATTTTTCCAGAGAAGAATCGTGTAAGAAGAAGAAGCTGCAATTTCACCCTTCATTTCTTGAAGAAGCTTATGAGAGTTGCAGGAAAATCTGTGCAGAATATGCCAAGACTTTCTATTTGGGAACTCTGCTGATGACAAAGGAGCGACAGAGAGCAATATGGGCAATATATGAAGTTCTTGATCGATGGGAAGAACGTTTGGAAGACATCTTTGAAGGGTGTCCCTATGATTTGCTGGATGCTGCTTTGAGCCGCACAGTATCCAAATTTCCCATAGACATGAAGCCTTTCAGAGATATGATTGAAGGCATGAGAATGGACACTAAAAAGTGTCGATATGAGAATTTTGAAGAGTTATATTTGTATTGTTATTATGTGGCTGGAACTGTGGGACTAATGAGTGTCCCTGTTATGGGAATTGCATCTGATTCTTCACTTCCTACTCAGACTATTTACAGTGCTGCTCTCCACTTGGGAATTGGAAATCAACTTACCAATATTCTAAGAGATGTGGGAGAGGAGTAAGCTCTCTCTCCCTCTCCCTCTCCCTCTCACTCTCTCTTACTTCTATTGTTTAGTTATGTTGTTTATGTTGGAATGTCTTGAATATGTTATTTGATGCAATAGCCAAGCACGAGATCTCGCTTTGAAATCTAAGTTGTATTCATAGTTATGTTATTTATGATTTTTGTCCTATGGTTTAGTGGTGTGTGCTATATATAAACTCTTGAAGCCTAGAGGTGCCTAATTTGATATTTTCAATCCCCTCTTTTCTTTGATTCTTTGGAGGCGAACAATCTGATTAACAACTGCTTGGCAGACTTTAATGAGGTAAAGAATGAAGTTGATGAGATTGTTGTTTTAAAAAAGTGCTATGAGAGGTAGGGTATATCTTCCCCAAGATGAGCTTGCACAGTTCGGGTTATGCGACGACGATATATTGGCAATGAGAGTGAATGATAAGTGGAGAGAATTCATGAAAGAACAGATCAAAAGGGCGAGGTTCTATTTCAAACTAGCAGAAAAGGGAGCTTCTCAGCTTGACAAGGCCAGCCGTTGGCCAGTATGGTCATCGTTGATGCTGTACCGAAAAATATTGGAAGCAATTGAAGAAAATGATTACAACAACTTCACAAAGCGAGCTTATGTAAAGAGATCCAAGAAACTTTTCACACTGCCTCTTGCTTACACCAAAGCTATTTCAGCACCAAGTCTAGTCTTCCATTGATTACAGAACCAACAACTTTGGATTGCGTTGCTGTTTCCAAGTACAATAACTTGACAAAGGGAGACTAAAATATTCTCAGTTTCTTAACTTTTTTTTTTTTTATATAGGAAACGATTTCATTGGTGAAAACCCATCAAAAGAGATTGCAAAGGATATCTTCAAATGGTTATTATGAGGAAATTTAAGCTCAAATTCTTAAAAGGGTGGTCCAAATTTC

Coding sequence (CDS)

ATGCACAAGGCATTTTCTTTGTCCTGTCCTTACCAGCCCAAAATTCCCAATTTCAATCCTACTCTGTTAATGCCATTGAACTTCATTGGAATATTCCAAAAGAATTGGAGTTATAAAGCTCTTGAATCCCAAACTTCTTCTTGGATTTATAAAATGAGTTCTTGTATTTGCATCACACCAAAGCCTAGCATATTCATTACAGAATGCAAAGGAAGGCTTTTTCCAAAACGATTCACAATTATTAAGAGCAGAGGTGGGGTAATTGCAGCTCCCAAAAGCCCTCACATATTAAAGTTTACAACTTTATCAAAACAAGGCATTCCTCTGGCTGATTTGAACGTCGATGAGATCGTCGAAAGACAATCTCAGGCCAACCATTTTTCCAGAGAAGAATCGTGTAAGAAGAAGAAGCTGCAATTTCACCCTTCATTTCTTGAAGAAGCTTATGAGAGTTGCAGGAAAATCTGTGCAGAATATGCCAAGACTTTCTATTTGGGAACTCTGCTGATGACAAAGGAGCGACAGAGAGCAATATGGGCAATATATGAAGTTCTTGATCGATGGGAAGAACGTTTGGAAGACATCTTTGAAGGGTGTCCCTATGATTTGCTGGATGCTGCTTTGAGCCGCACAGTATCCAAATTTCCCATAGACATGAAGCCTTTCAGAGATATGATTGAAGGCATGAGAATGGACACTAAAAAGTGTCGATATGAGAATTTTGAAGAGTTATATTTGTATTGTTATTATGTGGCTGGAACTGTGGGACTAATGAGTGTCCCTGTTATGGGAATTGCATCTGATTCTTCACTTCCTACTCAGACTATTTACAGTGCTGCTCTCCACTTGGGAATTGGAAATCAACTTACCAATATTCTAAGAGATGTGGGAGAGGAGTAA

Protein sequence

MHKAFSLSCPYQPKIPNFNPTLLMPLNFIGIFQKNWSYKALESQTSSWIYKMSSCICITPKPSIFITECKGRLFPKRFTIIKSRGGVIAAPKSPHILKFTTLSKQGIPLADLNVDEIVERQSQANHFSREESCKKKKLQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMTKERQRAIWAIYEVLDRWEERLEDIFEGCPYDLLDAALSRTVSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIASDSSLPTQTIYSAALHLGIGNQLTNILRDVGEE

Homology

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BLAST of Lsi10G009710 vs. ExPASy Swiss-Prot
Match: P37272 (Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum OX=4072 GN=PSY1 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 6.0e-62
Identity = 128/238 (53.78%), Postives = 162/238 (68.07%), Query Frame = 0


Query: 84  RGGVIAAPKSPHILKFTTLSKQGIPLADLNVDEIVERQSQANHFSREESCKKKKLQFHPS 143
           R  ++A P      + T  S++ +    L    +V+RQ +    S +E   KK +    +
Sbjct: 74  RSAIVATPAG----EMTMSSERMVYDVVLRQAALVKRQLR----STDELDVKKDIPIPGT 133

Query: 144 --FLEEAYESCRKICAEYAKTFYLGTLLMTKERQRAIWAIY------------------- 203
              L EAY+ C ++CAEYAKTFYLGT+LMT ER++AIWAIY                   
Sbjct: 134 LGLLSEAYDRCSEVCAEYAKTFYLGTMLMTPERRKAIWAIYVWCRRTDELVDGPNASHIT 193

Query: 204 -EVLDRWEERLEDIFEGCPYDLLDAALSRTVSKFPIDMKPFRDMIEGMRMDTKKCRYENF 263
              LDRWE+RLED+F G P+D+LDAALS TVSKFP+D++PFRDMIEGMRMD +K RY NF
Sbjct: 194 PAALDRWEDRLEDVFSGRPFDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYRNF 253

Query: 264 EELYLYCYYVAGTVGLMSVPVMGIASDSSLPTQTIYSAALHLGIGNQLTNILRDVGEE 300
           +ELYLYCYYVAGTVGLMSVP+MGIA +S   T+++Y+AAL LGI NQLTNILRDVGE+
Sbjct: 254 DELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGED 303

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BLAST of Lsi10G009710 vs. ExPASy Swiss-Prot
Match: P49085 (Phytoene synthase 1, chloroplastic OS=Zea mays OX=4577 GN=PSY1 PE=1 SV=2)

HSP 1 Score: 238.4 bits (607), Expect = 1.0e-61
Identity = 116/175 (66.29%), Postives = 138/175 (78.86%), Query Frame = 0


Query: 145 LEEAYESCRKICAEYAKTFYLGTLLMTKERQRAIWAIY--------------------EV 204
           L+EAY+ C +IC EYAKTFYLGT+LMT+ER+RAIWAIY                      
Sbjct: 115 LKEAYDRCGEICEEYAKTFYLGTMLMTEERRRAIWAIYVWCRRTDELVDGPNANYITPTA 174

Query: 205 LDRWEERLEDIFEGCPYDLLDAALSRTVSKFPIDMKPFRDMIEGMRMDTKKCRYENFEEL 264
           LDRWE+RLED+F G PYD+LDAALS T+S+FPID++PFRDMIEGMR D +K RY NF+EL
Sbjct: 175 LDRWEKRLEDLFTGRPYDMLDAALSDTISRFPIDIQPFRDMIEGMRSDLRKTRYNNFDEL 234

Query: 265 YLYCYYVAGTVGLMSVPVMGIASDSSLPTQTIYSAALHLGIGNQLTNILRDVGEE 300
           Y+YCYYVAGTVGLMSVPVMGIA++S   T+++YSAAL LGI NQLTNILRDVGE+
Sbjct: 235 YMYCYYVAGTVGLMSVPVMGIATESKATTESVYSAALALGIANQLTNILRDVGED 289

[Close]

BLAST of Lsi10G009710 vs. ExPASy Swiss-Prot
Match: P37273 (Phytoene synthase 2, chloroplastic (Fragment) OS=Solanum lycopersicum OX=4081 GN=PSY2 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.1e-61
Identity = 114/175 (65.14%), Postives = 136/175 (77.71%), Query Frame = 0


Query: 145 LEEAYESCRKICAEYAKTFYLGTLLMTKERQRAIWAIY--------------------EV 204
           L EAY+ C ++CAEYAKTFYLGT+LMT +R+RAIWAIY                    + 
Sbjct: 13  LSEAYDRCGEVCAEYAKTFYLGTMLMTPDRRRAIWAIYVWCRRTDELVDGPNASHITPQA 72

Query: 205 LDRWEERLEDIFEGCPYDLLDAALSRTVSKFPIDMKPFRDMIEGMRMDTKKCRYENFEEL 264
           LDRWE RLEDIF G P+D+LDAALS TVS+FP+D++PFRDM+EGMRMD  K RY NF+EL
Sbjct: 73  LDRWEARLEDIFNGRPFDMLDAALSDTVSRFPVDIQPFRDMVEGMRMDLWKSRYNNFDEL 132

Query: 265 YLYCYYVAGTVGLMSVPVMGIASDSSLPTQTIYSAALHLGIGNQLTNILRDVGEE 300
           YLYCYYVAGTVGLMSVP+MGIA +S   T+++Y+AAL LGI NQLTNILRDVGE+
Sbjct: 133 YLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALGIANQLTNILRDVGED 187

[Close]

BLAST of Lsi10G009710 vs. ExPASy Swiss-Prot
Match: Q5Z5B7 (Phytoene synthase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PSY1 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 8.7e-61
Identity = 116/184 (63.04%), Postives = 140/184 (76.09%), Query Frame = 0


Query: 136 KKLQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMTKERQRAIWAIY------------- 195
           K L    + L++AY  C +IC EYAKTFYLGT+LMT++R+RAIWAIY             
Sbjct: 116 KDLDLPRNGLKQAYHRCGEICEEYAKTFYLGTMLMTEDRRRAIWAIYVWCRRTDELVDGP 175

Query: 196 -------EVLDRWEERLEDIFEGCPYDLLDAALSRTVSKFPIDMKPFRDMIEGMRMDTKK 255
                    LDRWE+RL+D+F G PYD+LDAALS T+SKFPID++PFRDMIEGMR D +K
Sbjct: 176 NASHITPSALDRWEKRLDDLFTGRPYDMLDAALSDTISKFPIDIQPFRDMIEGMRSDLRK 235

Query: 256 CRYENFEELYLYCYYVAGTVGLMSVPVMGIASDSSLPTQTIYSAALHLGIGNQLTNILRD 300
            RY+NF+ELY+YCYYVAGTVGLMSVPVMGIA +S   T+++YSAAL LGI NQLTNILRD
Sbjct: 236 TRYKNFDELYMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRD 295

[Close]

BLAST of Lsi10G009710 vs. ExPASy Swiss-Prot
Match: P53797 (Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSY PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-60
Identity = 114/175 (65.14%), Postives = 135/175 (77.14%), Query Frame = 0


Query: 145 LEEAYESCRKICAEYAKTFYLGTLLMTKERQRAIWAIY--------------------EV 204
           L++AY+ C ++CAEYAKTFYLGTLLMT ER+RAIWAIY                      
Sbjct: 125 LKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGHNASHITPSA 184

Query: 205 LDRWEERLEDIFEGCPYDLLDAALSRTVSKFPIDMKPFRDMIEGMRMDTKKCRYENFEEL 264
           LDRWE RLED+F G PYD+ DAALS TVS+FP+D++PF DM+EGMRMD KK RY+NF+EL
Sbjct: 185 LDRWEARLEDLFAGRPYDMFDAALSDTVSRFPVDIQPFMDMVEGMRMDLKKSRYKNFDEL 244

Query: 265 YLYCYYVAGTVGLMSVPVMGIASDSSLPTQTIYSAALHLGIGNQLTNILRDVGEE 300
           YLYCYYVAGTVGLMSVPVMGIA +S    +++Y+AAL LGI NQLTNILRDVGE+
Sbjct: 245 YLYCYYVAGTVGLMSVPVMGIAPESLAEAESVYNAALALGIANQLTNILRDVGED 299

[Close]

BLAST of Lsi10G009710 vs. ExPASy TrEMBL
Match: A0A0A0KZ43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280510 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.7e-112
Identity = 208/268 (77.61%), Postives = 224/268 (83.58%), Query Frame = 0


Query: 52  MSSCICITPKPSIFITECKGRLFPKRFTIIKSRGGVIAAPKSPHILKFTTLSKQGIPLAD 111
           MSSC+C+TPKP +FI ECKG++ PKRF II++ GGV AAP+S   LKF TLSKQGI L  
Sbjct: 1   MSSCVCVTPKPLMFIGECKGKVLPKRFKIIRNGGGVTAAPRSSETLKFQTLSKQGIALGH 60

Query: 112 LNVDEIVERQSQANHFSREESCKKKKLQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMT 171
           L V+EIVERQS+ NHF REE C K+K++F  SFLEEAYESCRKICAEYAKTFYLGTLLMT
Sbjct: 61  LKVEEIVERQSEGNHFLREEGC-KRKMKFQASFLEEAYESCRKICAEYAKTFYLGTLLMT 120

Query: 172 KERQRAIWAIY--------------------EVLDRWEERLEDIFEGCPYDLLDAALSRT 231
           KERQRAIWAIY                    +VLDRWEERLEDIFEGCPYDLLDAALS T
Sbjct: 121 KERQRAIWAIYVWCRRTDELVDGPNAMYMNPKVLDRWEERLEDIFEGCPYDLLDAALSHT 180

Query: 232 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIASDSSL 291
           VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIA DSSL
Sbjct: 181 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSL 240

Query: 292 PTQTIYSAALHLGIGNQLTNILRDVGEE 300
            T T+YSAALHLGIGNQLTNILRDVGE+
Sbjct: 241 STHTVYSAALHLGIGNQLTNILRDVGED 267

[Close]

BLAST of Lsi10G009710 vs. ExPASy TrEMBL
Match: F8U9A7 (Phytoene synthase OS=Cucumis melo OX=3656 GN=PSY2 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.7e-110
Identity = 208/268 (77.61%), Postives = 221/268 (82.46%), Query Frame = 0


Query: 52  MSSCICITPKPSIFITECKGRLFPKRFTIIKSRGGVIAAPKSPHILKFTTLSKQGIPLAD 111
           MSSC+ +TPK   FI ECKG +FPKRF  I++ GG+IAAP+S   LK  TLSKQGIPL  
Sbjct: 1   MSSCVFVTPKSLTFIGECKGNVFPKRFKTIRNGGGIIAAPRSSETLKLQTLSKQGIPLDH 60

Query: 112 LNVDEIVERQSQANHFSREESCKKKKLQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMT 171
           L V+EIVERQS+ NHF REE C KKK++F PSFLEEAYESCRKICAEYAKTFYLGTLLMT
Sbjct: 61  LKVEEIVERQSEGNHFLREEWC-KKKMKFQPSFLEEAYESCRKICAEYAKTFYLGTLLMT 120

Query: 172 KERQRAIWAIY--------------------EVLDRWEERLEDIFEGCPYDLLDAALSRT 231
           KERQRAIWAIY                    +VLDRWEERLEDIFEG PYDLLDAALS T
Sbjct: 121 KERQRAIWAIYVWCRRTDELVDGPNAVYMNPKVLDRWEERLEDIFEGRPYDLLDAALSHT 180

Query: 232 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIASDSSL 291
           VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIA DSSL
Sbjct: 181 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSL 240

Query: 292 PTQTIYSAALHLGIGNQLTNILRDVGEE 300
            T TIYSAALHLGIGNQLTNILRDVGE+
Sbjct: 241 STHTIYSAALHLGIGNQLTNILRDVGED 267

[Close]

BLAST of Lsi10G009710 vs. ExPASy TrEMBL
Match: A0A5A7TAG3 (Phytoene synthase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00500 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.7e-110
Identity = 208/268 (77.61%), Postives = 221/268 (82.46%), Query Frame = 0


Query: 52  MSSCICITPKPSIFITECKGRLFPKRFTIIKSRGGVIAAPKSPHILKFTTLSKQGIPLAD 111
           MSSC+ +TPK   FI ECKG +FPKRF  I++ GG+IAAP+S   LK  TLSKQGIPL  
Sbjct: 1   MSSCVFVTPKSLTFIGECKGNVFPKRFKTIRNGGGIIAAPRSSETLKLQTLSKQGIPLDH 60

Query: 112 LNVDEIVERQSQANHFSREESCKKKKLQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMT 171
           L V+EIVERQS+ NHF REE C KKK++F PSFLEEAYESCRKICAEYAKTFYLGTLLMT
Sbjct: 61  LKVEEIVERQSEGNHFLREEWC-KKKMKFQPSFLEEAYESCRKICAEYAKTFYLGTLLMT 120

Query: 172 KERQRAIWAIY--------------------EVLDRWEERLEDIFEGCPYDLLDAALSRT 231
           KERQRAIWAIY                    +VLDRWEERLEDIFEG PYDLLDAALS T
Sbjct: 121 KERQRAIWAIYVWCRRTDELVDGPNAVYMNPKVLDRWEERLEDIFEGRPYDLLDAALSHT 180

Query: 232 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIASDSSL 291
           VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIA DSSL
Sbjct: 181 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSL 240

Query: 292 PTQTIYSAALHLGIGNQLTNILRDVGEE 300
            T TIYSAALHLGIGNQLTNILRDVGE+
Sbjct: 241 STHTIYSAALHLGIGNQLTNILRDVGED 267

[Close]

BLAST of Lsi10G009710 vs. ExPASy TrEMBL
Match: A0A1L5JHW5 (Phytoene synthase 2 OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.9e-107
Identity = 207/268 (77.24%), Postives = 219/268 (81.72%), Query Frame = 0


Query: 52  MSSCICITPKPSIFITECKGRLFPKRFTIIKSRGGVIAAPKSPHILKFTTLSKQGIPLAD 111
           MS  I +  KP IFI E KG+LFPKR T+I +R GVIAAPKSP  L F TLSKQGIPLAD
Sbjct: 1   MSCSISVAAKPCIFIGEGKGKLFPKRSTLIMNRAGVIAAPKSPQTLDFPTLSKQGIPLAD 60

Query: 112 LNVDEIVERQSQANHFSREESCKKKKLQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMT 171
           L+V+EIVERQSQ NHFS EESCKK    FHP FLEEAYESCRKICAEYAKTFYLGTLLMT
Sbjct: 61  LHVEEIVERQSQGNHFSDEESCKK----FHPWFLEEAYESCRKICAEYAKTFYLGTLLMT 120

Query: 172 KERQRAIWAIY--------------------EVLDRWEERLEDIFEGCPYDLLDAALSRT 231
           KERQRAIWAIY                    +VLDRWEERL+DIFEG PYD+LDAALS T
Sbjct: 121 KERQRAIWAIYVWCRRTDELVDGPNAVYMNPKVLDRWEERLQDIFEGRPYDVLDAALSHT 180

Query: 232 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIASDSSL 291
           VSKFPI MKPFRDMIEGMRMDT+K RY+NFEELYLYCYYVAGTVGLMSVPVMGIA DS L
Sbjct: 181 VSKFPIHMKPFRDMIEGMRMDTRKSRYDNFEELYLYCYYVAGTVGLMSVPVMGIAPDSLL 240

Query: 292 PTQTIYSAALHLGIGNQLTNILRDVGEE 300
            TQTIYSAALHLGIGNQLTNILRDVGE+
Sbjct: 241 STQTIYSAALHLGIGNQLTNILRDVGED 264

[Close]

BLAST of Lsi10G009710 vs. ExPASy TrEMBL
Match: A0A6J1JAD4 (phytoene synthase 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111483996 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 1.1e-103
Identity = 199/268 (74.25%), Postives = 220/268 (82.09%), Query Frame = 0


Query: 52  MSSCICITPKPSIFITECKGRLFPKRFTIIKSRGGVIAAPKSPHILKFTTLSKQGIPLAD 111
           M+S I +TP P I I +C+G+    R  +I SRGGVIAAP SP  LKF TLSKQGIPLAD
Sbjct: 1   MTSSISLTPNPRIVIGDCEGK--RSRVRVIMSRGGVIAAPTSPQTLKFPTLSKQGIPLAD 60

Query: 112 LNVDEIVERQSQANHFSREESCKKKKLQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMT 171
           L+VDEIVERQS+ANH S  + C  K LQ HPSFLEEAYESCRKICAEYA+TFYLGTLLMT
Sbjct: 61  LHVDEIVERQSRANHSS--QPC--KTLQLHPSFLEEAYESCRKICAEYAQTFYLGTLLMT 120

Query: 172 KERQRAIWAIY--------------------EVLDRWEERLEDIFEGCPYDLLDAALSRT 231
           KERQRAIWAIY                    EVLDRWEERL+DIFEGCPYD+LDAALS T
Sbjct: 121 KERQRAIWAIYVWCRRTDELVDGPNAAYMNPEVLDRWEERLQDIFEGCPYDVLDAALSHT 180

Query: 232 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIASDSSL 291
           VSKFP+DMKPF+DMIEGMRMDT+KCRY++FEELYLYCYYVAGTVGLMSVPVMGIA DSSL
Sbjct: 181 VSKFPLDMKPFKDMIEGMRMDTRKCRYDSFEELYLYCYYVAGTVGLMSVPVMGIAPDSSL 240

Query: 292 PTQTIYSAALHLGIGNQLTNILRDVGEE 300
            +QTIY+A+LHLGIGNQLTNILRDVGE+
Sbjct: 241 SSQTIYTASLHLGIGNQLTNILRDVGED 262

[Close]

BLAST of Lsi10G009710 vs. NCBI nr
Match: XP_038901205.1 (phytoene synthase 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 435.3 bits (1118), Expect = 4.4e-118
Identity = 219/268 (81.72%), Postives = 230/268 (85.82%), Query Frame = 0


Query: 52  MSSCICITPKPSIFITECKGRLFPKRFTIIKSRGGVIAAPKSPHILKFTTLSKQGIPLAD 111
           M+SCICITPKP  FI ECKG++FPK+FT+I S+GGVIAAPKS   LKF TLSKQGIPLAD
Sbjct: 1   MNSCICITPKPLTFIGECKGKVFPKQFTVIMSKGGVIAAPKSSQTLKFPTLSKQGIPLAD 60

Query: 112 LNVDEIVERQSQANHFSREESCKKKKLQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMT 171
           LNVDEIVERQSQ+NHF        KK+QFHPSFLEEAYESCRKICAEYAKTFYLGTLLMT
Sbjct: 61  LNVDEIVERQSQSNHF-------LKKMQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMT 120

Query: 172 KERQRAIWAIY--------------------EVLDRWEERLEDIFEGCPYDLLDAALSRT 231
           KERQRAIWAIY                    +VLDRWEERLEDIFEGCPYDLLDAALS T
Sbjct: 121 KERQRAIWAIYVWCRRTDELVDGPNAVYMNPKVLDRWEERLEDIFEGCPYDLLDAALSHT 180

Query: 232 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIASDSSL 291
           VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIA DSSL
Sbjct: 181 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSL 240

Query: 292 PTQTIYSAALHLGIGNQLTNILRDVGEE 300
           PTQTIYSAA+HLGIGNQLTNILRDVGE+
Sbjct: 241 PTQTIYSAAIHLGIGNQLTNILRDVGED 261

[Close]

BLAST of Lsi10G009710 vs. NCBI nr
Match: XP_031740055.1 (phytoene synthase 2, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 415.6 bits (1067), Expect = 3.6e-112
Identity = 208/268 (77.61%), Postives = 224/268 (83.58%), Query Frame = 0


Query: 52  MSSCICITPKPSIFITECKGRLFPKRFTIIKSRGGVIAAPKSPHILKFTTLSKQGIPLAD 111
           MSSC+C+TPKP +FI ECKG++ PKRF II++ GGV AAP+S   LKF TLSKQGI L  
Sbjct: 1   MSSCVCVTPKPLMFIGECKGKVLPKRFKIIRNGGGVTAAPRSSETLKFQTLSKQGIALGH 60

Query: 112 LNVDEIVERQSQANHFSREESCKKKKLQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMT 171
           L V+EIVERQS+ NHF REE C K+K++F  SFLEEAYESCRKICAEYAKTFYLGTLLMT
Sbjct: 61  LKVEEIVERQSEGNHFLREEGC-KRKMKFQASFLEEAYESCRKICAEYAKTFYLGTLLMT 120

Query: 172 KERQRAIWAIY--------------------EVLDRWEERLEDIFEGCPYDLLDAALSRT 231
           KERQRAIWAIY                    +VLDRWEERLEDIFEGCPYDLLDAALS T
Sbjct: 121 KERQRAIWAIYVWCRRTDELVDGPNAMYMNPKVLDRWEERLEDIFEGCPYDLLDAALSHT 180

Query: 232 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIASDSSL 291
           VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIA DSSL
Sbjct: 181 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSL 240

Query: 292 PTQTIYSAALHLGIGNQLTNILRDVGEE 300
            T T+YSAALHLGIGNQLTNILRDVGE+
Sbjct: 241 STHTVYSAALHLGIGNQLTNILRDVGED 267

[Close]

BLAST of Lsi10G009710 vs. NCBI nr
Match: XP_004142164.1 (phytoene synthase 2, chloroplastic isoform X2 [Cucumis sativus] >KGN54074.1 hypothetical protein Csa_017939 [Cucumis sativus])

HSP 1 Score: 415.6 bits (1067), Expect = 3.6e-112
Identity = 208/268 (77.61%), Postives = 224/268 (83.58%), Query Frame = 0


Query: 52  MSSCICITPKPSIFITECKGRLFPKRFTIIKSRGGVIAAPKSPHILKFTTLSKQGIPLAD 111
           MSSC+C+TPKP +FI ECKG++ PKRF II++ GGV AAP+S   LKF TLSKQGI L  
Sbjct: 1   MSSCVCVTPKPLMFIGECKGKVLPKRFKIIRNGGGVTAAPRSSETLKFQTLSKQGIALGH 60

Query: 112 LNVDEIVERQSQANHFSREESCKKKKLQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMT 171
           L V+EIVERQS+ NHF REE C K+K++F  SFLEEAYESCRKICAEYAKTFYLGTLLMT
Sbjct: 61  LKVEEIVERQSEGNHFLREEGC-KRKMKFQASFLEEAYESCRKICAEYAKTFYLGTLLMT 120

Query: 172 KERQRAIWAIY--------------------EVLDRWEERLEDIFEGCPYDLLDAALSRT 231
           KERQRAIWAIY                    +VLDRWEERLEDIFEGCPYDLLDAALS T
Sbjct: 121 KERQRAIWAIYVWCRRTDELVDGPNAMYMNPKVLDRWEERLEDIFEGCPYDLLDAALSHT 180

Query: 232 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIASDSSL 291
           VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIA DSSL
Sbjct: 181 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSL 240

Query: 292 PTQTIYSAALHLGIGNQLTNILRDVGEE 300
            T T+YSAALHLGIGNQLTNILRDVGE+
Sbjct: 241 STHTVYSAALHLGIGNQLTNILRDVGED 267

[Close]

BLAST of Lsi10G009710 vs. NCBI nr
Match: XP_008449808.1 (PREDICTED: phytoene synthase 2, chloroplastic [Cucumis melo] >AEH03199.1 phytoene synthase [Cucumis melo] >AGN48018.1 phytoene synthase [Cucumis melo] >KAA0040063.1 phytoene synthase 2 [Cucumis melo var. makuwa] >TYK21686.1 phytoene synthase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 407.5 bits (1046), Expect = 9.8e-110
Identity = 208/268 (77.61%), Postives = 221/268 (82.46%), Query Frame = 0


Query: 52  MSSCICITPKPSIFITECKGRLFPKRFTIIKSRGGVIAAPKSPHILKFTTLSKQGIPLAD 111
           MSSC+ +TPK   FI ECKG +FPKRF  I++ GG+IAAP+S   LK  TLSKQGIPL  
Sbjct: 1   MSSCVFVTPKSLTFIGECKGNVFPKRFKTIRNGGGIIAAPRSSETLKLQTLSKQGIPLDH 60

Query: 112 LNVDEIVERQSQANHFSREESCKKKKLQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMT 171
           L V+EIVERQS+ NHF REE C KKK++F PSFLEEAYESCRKICAEYAKTFYLGTLLMT
Sbjct: 61  LKVEEIVERQSEGNHFLREEWC-KKKMKFQPSFLEEAYESCRKICAEYAKTFYLGTLLMT 120

Query: 172 KERQRAIWAIY--------------------EVLDRWEERLEDIFEGCPYDLLDAALSRT 231
           KERQRAIWAIY                    +VLDRWEERLEDIFEG PYDLLDAALS T
Sbjct: 121 KERQRAIWAIYVWCRRTDELVDGPNAVYMNPKVLDRWEERLEDIFEGRPYDLLDAALSHT 180

Query: 232 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIASDSSL 291
           VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIA DSSL
Sbjct: 181 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIAPDSSL 240

Query: 292 PTQTIYSAALHLGIGNQLTNILRDVGEE 300
            T TIYSAALHLGIGNQLTNILRDVGE+
Sbjct: 241 STHTIYSAALHLGIGNQLTNILRDVGED 267

[Close]

BLAST of Lsi10G009710 vs. NCBI nr
Match: APO14284.1 (phytoene synthase 2 [Luffa aegyptiaca])

HSP 1 Score: 398.3 bits (1022), Expect = 5.9e-107
Identity = 207/268 (77.24%), Postives = 219/268 (81.72%), Query Frame = 0


Query: 52  MSSCICITPKPSIFITECKGRLFPKRFTIIKSRGGVIAAPKSPHILKFTTLSKQGIPLAD 111
           MS  I +  KP IFI E KG+LFPKR T+I +R GVIAAPKSP  L F TLSKQGIPLAD
Sbjct: 1   MSCSISVAAKPCIFIGEGKGKLFPKRSTLIMNRAGVIAAPKSPQTLDFPTLSKQGIPLAD 60

Query: 112 LNVDEIVERQSQANHFSREESCKKKKLQFHPSFLEEAYESCRKICAEYAKTFYLGTLLMT 171
           L+V+EIVERQSQ NHFS EESCKK    FHP FLEEAYESCRKICAEYAKTFYLGTLLMT
Sbjct: 61  LHVEEIVERQSQGNHFSDEESCKK----FHPWFLEEAYESCRKICAEYAKTFYLGTLLMT 120

Query: 172 KERQRAIWAIY--------------------EVLDRWEERLEDIFEGCPYDLLDAALSRT 231
           KERQRAIWAIY                    +VLDRWEERL+DIFEG PYD+LDAALS T
Sbjct: 121 KERQRAIWAIYVWCRRTDELVDGPNAVYMNPKVLDRWEERLQDIFEGRPYDVLDAALSHT 180

Query: 232 VSKFPIDMKPFRDMIEGMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIASDSSL 291
           VSKFPI MKPFRDMIEGMRMDT+K RY+NFEELYLYCYYVAGTVGLMSVPVMGIA DS L
Sbjct: 181 VSKFPIHMKPFRDMIEGMRMDTRKSRYDNFEELYLYCYYVAGTVGLMSVPVMGIAPDSLL 240

Query: 292 PTQTIYSAALHLGIGNQLTNILRDVGEE 300
            TQTIYSAALHLGIGNQLTNILRDVGE+
Sbjct: 241 STQTIYSAALHLGIGNQLTNILRDVGED 264

[Close]

BLAST of Lsi10G009710 vs. TAIR 10
Match: AT5G17230.1 (PHYTOENE SYNTHASE )

HSP 1 Score: 231.5 bits (589), Expect = 8.9e-61
Identity = 113/177 (63.84%), Postives = 136/177 (76.84%), Query Frame = 0


Query: 143 SFLEEAYESCRKICAEYAKTFYLGTLLMTKERQRAIWAIY-------------------- 202
           S L EAY+ C ++CAEYAKTFYLGTLLMT ER++AIWAIY                    
Sbjct: 126 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 185

Query: 203 EVLDRWEERLEDIFEGCPYDLLDAALSRTVSKFPIDMKPFRDMIEGMRMDTKKCRYENFE 262
             LDRWE RLED+F G P+D+LDAAL+ TV+++P+D++PFRDMIEGMRMD KK RY+NF+
Sbjct: 186 MALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFD 245

Query: 263 ELYLYCYYVAGTVGLMSVPVMGIASDSSLPTQTIYSAALHLGIGNQLTNILRDVGEE 300
           +LYLYCYYVAGTVGLMSVPVMGI   S   T+++Y+AAL LGI NQLTNILRDVGE+
Sbjct: 246 DLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGED 302

[Close]

BLAST of Lsi10G009710 vs. TAIR 10
Match: AT5G17230.2 (PHYTOENE SYNTHASE )

HSP 1 Score: 231.5 bits (589), Expect = 8.9e-61
Identity = 113/177 (63.84%), Postives = 136/177 (76.84%), Query Frame = 0


Query: 143 SFLEEAYESCRKICAEYAKTFYLGTLLMTKERQRAIWAIY-------------------- 202
           S L EAY+ C ++CAEYAKTFYLGTLLMT ER++AIWAIY                    
Sbjct: 126 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITP 185

Query: 203 EVLDRWEERLEDIFEGCPYDLLDAALSRTVSKFPIDMKPFRDMIEGMRMDTKKCRYENFE 262
             LDRWE RLED+F G P+D+LDAAL+ TV+++P+D++PFRDMIEGMRMD KK RY+NF+
Sbjct: 186 MALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGMRMDLKKSRYQNFD 245

Query: 263 ELYLYCYYVAGTVGLMSVPVMGIASDSSLPTQTIYSAALHLGIGNQLTNILRDVGEE 300
           +LYLYCYYVAGTVGLMSVPVMGI   S   T+++Y+AAL LGI NQLTNILRDVGE+
Sbjct: 246 DLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGED 302

[Close]

BLAST of Lsi10G009710 vs. TAIR 10
Match: AT5G17230.3 (PHYTOENE SYNTHASE )

HSP 1 Score: 226.1 bits (575), Expect = 3.8e-59
Identity = 113/192 (58.85%), Postives = 137/192 (71.35%), Query Frame = 0


Query: 143 SFLEEAYESCRKICAEYAKTFYLGTLLMTKERQRAIWAIYEV------------------ 202
           S L EAY+ C ++CAEYAKTFYLGTLLMT ER++AIWAIY +                  
Sbjct: 126 SLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIVALVWCRR 185

Query: 203 -----------------LDRWEERLEDIFEGCPYDLLDAALSRTVSKFPIDMKPFRDMIE 262
                            LDRWE RLED+F G P+D+LDAAL+ TV+++P+D++PFRDMIE
Sbjct: 186 TDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIE 245

Query: 263 GMRMDTKKCRYENFEELYLYCYYVAGTVGLMSVPVMGIASDSSLPTQTIYSAALHLGIGN 300
           GMRMD KK RY+NF++LYLYCYYVAGTVGLMSVPVMGI   S   T+++Y+AAL LGI N
Sbjct: 246 GMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIAN 305

The following BLAST results are available for this feature:

BLAST of Lsi10G009710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37272	6.0e-62	53.78	Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum OX=4072 ...	[more]
P49085	1.0e-61	66.29	Phytoene synthase 1, chloroplastic OS=Zea mays OX=4577 GN=PSY1 PE=1 SV=2	[more]
P37273	5.1e-61	65.14	Phytoene synthase 2, chloroplastic (Fragment) OS=Solanum lycopersicum OX=4081 GN...	[more]
Q5Z5B7	8.7e-61	63.04	Phytoene synthase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=P...	[more]
P53797	1.9e-60	65.14	Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSY PE...	[more]

BLAST of Lsi10G009710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ43	1.7e-112	77.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280510 PE=3 SV=1	[more]
F8U9A7	4.7e-110	77.61	Phytoene synthase OS=Cucumis melo OX=3656 GN=PSY2 PE=3 SV=1	[more]
A0A5A7TAG3	4.7e-110	77.61	Phytoene synthase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G...	[more]
A0A1L5JHW5	2.9e-107	77.24	Phytoene synthase 2 OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
A0A6J1JAD4	1.1e-103	74.25	phytoene synthase 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111483...	[more]

BLAST of Lsi10G009710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901205.1	4.4e-118	81.72	phytoene synthase 2, chloroplastic-like [Benincasa hispida]	[more]
XP_031740055.1	3.6e-112	77.61	phytoene synthase 2, chloroplastic isoform X1 [Cucumis sativus]	[more]
XP_004142164.1	3.6e-112	77.61	phytoene synthase 2, chloroplastic isoform X2 [Cucumis sativus] >KGN54074.1 hypo...	[more]
XP_008449808.1	9.8e-110	77.61	PREDICTED: phytoene synthase 2, chloroplastic [Cucumis melo] >AEH03199.1 phytoen...	[more]
APO14284.1	5.9e-107	77.24	phytoene synthase 2 [Luffa aegyptiaca]	[more]

BLAST of Lsi10G009710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17230.1	8.9e-61	63.84	PHYTOENE SYNTHASE	[more]
AT5G17230.2	8.9e-61	63.84	PHYTOENE SYNTHASE	[more]
AT5G17230.3	3.8e-59	58.85	PHYTOENE SYNTHASE	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 140..299 e-value: 3.5E-44 score: 153.2
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 148..298
IPR002060	Squalene/phytoene synthase	PFAM	PF00494	SQS_PSY	coord: 185..298 e-value: 3.9E-27 score: 95.4
None	No IPR available	PANTHER	PTHR31480:SF9	PHYTOENE SYNTHASE, CHLOROPLASTIC	coord: 53..299
IPR044843	Trans-isoprenyl diphosphate synthases, bacterial-type	PANTHER	PTHR31480	BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE	coord: 53..299
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01044	SQUALEN_PHYTOEN_SYN_1	coord: 247..262
IPR033904	Trans-isoprenyl diphosphate synthases, head-to-head	CDD	cd00683	Trans_IPPS_HH	coord: 150..298 e-value: 5.08211E-54 score: 175.116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G009710.1	Lsi10G009710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004311	farnesyltranstransferase activity
molecular_function	GO:0016767	geranylgeranyl-diphosphate geranylgeranyltransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups