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Lsi10G008900 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATCCCAAGGAATTGGTCTCGCCTTAATTTCTTCTCTTGATAAAGAAAGATAGAGGAGAAATCAAAGAAAGAAGGGAGAGCTTCTGAAACGCCAAAACCTGAGCTGACACCTGAAAAAGAAGAAACGGCGTAGCCCTCACCAATGAACAGTGTGAACAGTGGGGACGTCATTGAACTGCGAAGAAACTCCACCAACTGGGCTAAGGTAGTGGAAGACATCGTGAAGCTAGAGAAGAAGATTTTCCCAAAACACGAGTCTCTTGCCAGGTTCTTCGACGAAGAATTGAGAAAACAGAATTCTGGATTGCTTTTCCTGGACTTACATGGAGAAGTCGTAGGTTATGTCATGTATTCTTGGCCCTCTTCCCTCTACGCTACCATCGCCAAACTCGCAGGTTCCCTTCCATCCTCTTCCCTAAATTCTTTTCACGCCCACTTTTTCCGGATATGCTAAACTCGAAATCTGCCGATGTTCCAATTATCTACTACTTCCACTTTACCTTGTAGATGATTTGGTTTAGTTTAGATGGACTATAACTATAATCTTGCAATCTGGCTAACTTACTTTATTAGTCTCAATTCTATCGATTTTGCAACTTGTTTATGCACATAACCTGTTTGATAAATGGGCTGAGAGAAAATATTCCCCTTTTCCCATCTGGGGCTTCTAGGAAAGCTTTTAAGAATGGTAAATTGTGCGTTAATTTCGAAATTCTGTATCCCTTTTTTGCTAATCACGAGCCATTATGTGCTTTCCTGGCATGTGGGTTTAAACAAAGTGCAGTGAAGGAGAATTGTAGAAGACAAGGTCATGGAGAAGCACTCATGAAGGCAGCCATTGAGAAGTGCAGAACCAGAAACATTCAGCGCATAGGTCTTCATGTTGATCCCTTGAGGACGGCGGCTATGGATCTCTACAAGAAACTTGGGTTCCAAGTTGATAGCTTGATTGAAGGATACTACTCTGCGGATCGAGATGCCTACAGAATGTACTTGGAATTTTGATACAGCATAGTCTTGCAACTACACTAGACATTTTCTAAGTTAAATTTTATATGTCTTGACTTTATATTTATATCAGATAACTCATGATCACTCCTATTGTAATTTTATAATGCATTTTATATCAGAGAACCAGAAACTTCTAATAGTTCTTAAGCAATCTTGTTTCTGAACACCTATAAACTTTATTAATAAGAACAGAATATCTTATTATTAA TAATCCCAAGGAATTGGTCTCGCCTTAATTTCTTCTCTTGATAAAGAAAGATAGAGGAGAAATCAAAGAAAGAAGGGAGAGCTTCTGAAACGCCAAAACCTGAGCTGACACCTGAAAAAGAAGAAACGGCGTAGCCCTCACCAATGAACAGTGTGAACAGTGGGGACGTCATTGAACTGCGAAGAAACTCCACCAACTGGGCTAAGGTAGTGGAAGACATCGTGAAGCTAGAGAAGAAGATTTTCCCAAAACACGAGTCTCTTGCCAGGTTCTTCGACGAAGAATTGAGAAAACAGAATTCTGGATTGCTTTTCCTGGACTTACATGGAGAAGTCGTAGGTTATGTCATGTATTCTTGGCCCTCTTCCCTCTACGCTACCATCGCCAAACTCGCAGTGAAGGAGAATTGTAGAAGACAAGGTCATGGAGAAGCACTCATGAAGGCAGCCATTGAGAAGTGCAGAACCAGAAACATTCAGCGCATAGGTCTTCATGTTGATCCCTTGAGGACGGCGGCTATGGATCTCTACAAGAAACTTGGGTTCCAAGTTGATAGCTTGATTGAAGGATACTACTCTGCGGATCGAGATGCCTACAGAATGTACTTGGAATTTTGATACAGCATAGTCTTGCAACTACACTAGACATTTTCTAAGTTAAATTTTATATGTCTTGACTTTATATTTATATCAGATAACTCATGATCACTCCTATTGTAATTTTATAATGCATTTTATATCAGAGAACCAGAAACTTCTAATAGTTCTTAAGCAATCTTGTTTCTGAACACCTATAAACTTTATTAATAAGAACAGAATATCTTATTATTAA ATGAACAGTGTGAACAGTGGGGACGTCATTGAACTGCGAAGAAACTCCACCAACTGGGCTAAGGTAGTGGAAGACATCGTGAAGCTAGAGAAGAAGATTTTCCCAAAACACGAGTCTCTTGCCAGGTTCTTCGACGAAGAATTGAGAAAACAGAATTCTGGATTGCTTTTCCTGGACTTACATGGAGAAGTCGTAGGTTATGTCATGTATTCTTGGCCCTCTTCCCTCTACGCTACCATCGCCAAACTCGCAGTGAAGGAGAATTGTAGAAGACAAGGTCATGGAGAAGCACTCATGAAGGCAGCCATTGAGAAGTGCAGAACCAGAAACATTCAGCGCATAGGTCTTCATGTTGATCCCTTGAGGACGGCGGCTATGGATCTCTACAAGAAACTTGGGTTCCAAGTTGATAGCTTGATTGAAGGATACTACTCTGCGGATCGAGATGCCTACAGAATGTACTTGGAATTTTGA MNSVNSGDVIELRRNSTNWAKVVEDIVKLEKKIFPKHESLARFFDEELRKQNSGLLFLDLHGEVVGYVMYSWPSSLYATIAKLAVKENCRRQGHGEALMKAAIEKCRTRNIQRIGLHVDPLRTAAMDLYKKLGFQVDSLIEGYYSADRDAYRMYLEF Homology
BLAST of Lsi10G008900 vs. ExPASy Swiss-Prot
Match: Q976C3 (N-alpha-acetyltransferase OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) OX=273063 GN=STK_02580 PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.8e-10 Identity = 44/143 (30.77%), Postives = 73/143 (51.05%), Query Frame = 0
BLAST of Lsi10G008900 vs. ExPASy Swiss-Prot
Match: Q4JBG0 (N-alpha-acetyltransferase OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) OX=330779 GN=Saci_0459 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.3e-09 Identity = 44/143 (30.77%), Postives = 71/143 (49.65%), Query Frame = 0
BLAST of Lsi10G008900 vs. ExPASy Swiss-Prot
Match: O05517 (Putative [ribosomal protein S18]-alanine N-acetyltransferase OS=Bacillus subtilis (strain 168) OX=224308 GN=rimI PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.5e-08 Identity = 37/134 (27.61%), Postives = 64/134 (47.76%), Query Frame = 0
BLAST of Lsi10G008900 vs. ExPASy TrEMBL
Match: A0A0A0KG64 (N-acetyltransferase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G128560 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.1e-77 Identity = 142/154 (92.21%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Lsi10G008900 vs. ExPASy TrEMBL
Match: A0A1S3CHW8 (putative ribosomal-protein-alanine acetyltransferase OS=Cucumis melo OX=3656 GN=LOC103500942 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 4.4e-75 Identity = 141/154 (91.56%), Postives = 148/154 (96.10%), Query Frame = 0
BLAST of Lsi10G008900 vs. ExPASy TrEMBL
Match: A0A5D3C6B8 (Putative ribosomal-protein-alanine acetyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001840 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 4.4e-75 Identity = 141/154 (91.56%), Postives = 148/154 (96.10%), Query Frame = 0
BLAST of Lsi10G008900 vs. ExPASy TrEMBL
Match: A0A6J1CIB3 (uncharacterized protein LOC111011202 OS=Momordica charantia OX=3673 GN=LOC111011202 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 1.0e-71 Identity = 134/154 (87.01%), Postives = 149/154 (96.75%), Query Frame = 0
BLAST of Lsi10G008900 vs. ExPASy TrEMBL
Match: A0A6J1G710 (uncharacterized protein LOC111451442 OS=Cucurbita moschata OX=3662 GN=LOC111451442 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 3.9e-71 Identity = 136/154 (88.31%), Postives = 148/154 (96.10%), Query Frame = 0
BLAST of Lsi10G008900 vs. NCBI nr
Match: XP_004139939.1 (uncharacterized protein LOC101203471 [Cucumis sativus]) HSP 1 Score: 298.1 bits (762), Expect = 4.4e-77 Identity = 142/154 (92.21%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Lsi10G008900 vs. NCBI nr
Match: XP_038902888.1 (putative [ribosomal protein S18]-alanine N-acetyltransferase [Benincasa hispida]) HSP 1 Score: 297.7 bits (761), Expect = 5.7e-77 Identity = 144/154 (93.51%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Lsi10G008900 vs. NCBI nr
Match: XP_008462627.1 (PREDICTED: putative ribosomal-protein-alanine acetyltransferase [Cucumis melo] >XP_008462628.1 PREDICTED: putative ribosomal-protein-alanine acetyltransferase [Cucumis melo] >XP_008462629.1 PREDICTED: putative ribosomal-protein-alanine acetyltransferase [Cucumis melo] >KAA0025212.1 putative ribosomal-protein-alanine acetyltransferase [Cucumis melo var. makuwa] >TYK07453.1 putative ribosomal-protein-alanine acetyltransferase [Cucumis melo var. makuwa]) HSP 1 Score: 290.4 bits (742), Expect = 9.1e-75 Identity = 141/154 (91.56%), Postives = 148/154 (96.10%), Query Frame = 0
BLAST of Lsi10G008900 vs. NCBI nr
Match: KAG7034917.1 (hypothetical protein SDJN02_01710 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 279.6 bits (714), Expect = 1.6e-71 Identity = 137/154 (88.96%), Postives = 149/154 (96.75%), Query Frame = 0
BLAST of Lsi10G008900 vs. NCBI nr
Match: XP_022140583.1 (uncharacterized protein LOC111011202 [Momordica charantia]) HSP 1 Score: 279.3 bits (713), Expect = 2.1e-71 Identity = 134/154 (87.01%), Postives = 149/154 (96.75%), Query Frame = 0
BLAST of Lsi10G008900 vs. TAIR 10
Match: AT1G03650.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein ) HSP 1 Score: 243.0 bits (619), Expect = 1.6e-64 Identity = 113/154 (73.38%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of Lsi10G008900 vs. TAIR 10
Match: AT5G11340.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein ) HSP 1 Score: 42.4 bits (98), Expect = 4.0e-04 Identity = 25/74 (33.78%), Postives = 34/74 (45.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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