Lsi10G008890 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi10G008890
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	expansin-B3-like
Location	chr10: 13169875 .. 13172063 (-)
RNA-Seq Expression	Lsi10G008890
Synteny	Lsi10G008890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCACACCTGCAACATCATACTTGTGCTCCAACAAAAACCGTCGGCCACACACTCCACAATCCTCTCACTCAACTGTTTTTCTCGATCACTGTGCTCGCCGGAATCTGACATTGTCGGTGGAGCAAGCGGTGCCATCGCCTACCCAGACGCAAATGCAGCTCCTCCTCTTTCGCCGTAGTTTTCGGCTCATTAGAGCTTTGTTCTGTGCCGCGGCTGTGCTTGAGTGGTTCACGGCGGCGGCTCAGCTCCAACACCGTGTACCGAATCTACATTGGCTTCCAGCCACCGCCACGTGGTATGGAAGCCCCGAGGGAGACGGTAGCGACGGTACGGCGATTCCATTTCCCTACATTCTGTTTTTGTTCTGTTTTCTTTGTTTTGGGTTTCTTTTAGGGTCTGTAAATTTATGGGTCGGCTCTGTTTCTTTGAAATACTGTCTAGACGTTGCCGTAAAAAAATGTGATTACCGGGGGTTGAATTAACGAAAACCCAGTTCAGAAATCTCTTAAATCCAACCCTAATTTCACTTTTTGAAGTTCTTTGCTGCTAGAAATTACTGGATCTGACAATGTGAAATCGCAGGTGGAGCATGTGGGTATGGTAATTTAGTGGATGTGAAGCCTCTAAAGGCCAGAGTTGGGGCTGTGAGTCCAGTTCTGTTTAGAAATGGTGAAGGGTGTGGAGCCTGTTACAAAGTGAAGTGTTTAGACCAGAACATTTGCTCTAGACGAGCAGTGACTATAATCGTCACCGACGAGTGCCCCGGTGGGTATTGTTCCAATGGCAATACTCACTTCGATCTCAGCGGTGCCGCTTTTGGCCGTATGGCCATTACCGGCGAAGGTGGGCAGCTCAGAAACCGAGGCGAAATCCCAGTAATTTACCGACGGTACAAATTGGTTGCAACTCTGTTTTTTGTCACTTTATGAATTGTTTGTTTTCTATCTCTGCTTTCTATTTTGTCGCTTATTTTTTGTTGTCCTAAATCTGTAGAACTCCGTGTAAGTACCCAGGCAAGAACATTGCCTTCCATGTCAATGAAGGTTCGACAGATTACTGGCTCTCACTTTTAGTTGAATTCGAGGATGGGGATGGAGACATCGGTGCAATGCAAATAAAAGAAGTAAGAAAAAAAAAAGAAAAATTGAAGTACACCCTTTCTCATCTCAAGCATATTCCATTGCTTTAATTACAATAATTTAAGATGTGAAAAGATAGAAAAGCTGGTACCTAATTACACGTTGAAAGTTGAATATCCCAGTGGAAGAATCTTTGAAAAAGAAGCATCTTTATTAGAAGAAAAAGCATGCAGTATTCCCACATGATTATAAAAATTCTCAATATTGACTAAACATATTCACAAAGCTTTGAATATTGATTTGACTAATTTTTCTTTCCCTTCCGACGTTGTGTTTGGCAGACAAATTCAGGGGAATGGCTGGATATGAACCATCTATGGGGGGCAAATTGGTGTATCATTGGTGGGCCATTAAAAGGCCCATTCTCAGTGAGATTAACAACATTATCTACAGGAAGAACCCTCTCAGCAAGGGATATAATCCCAAGGAATTGGTCTCCCAAAGCCACTTACACTTCCCGCCTTAATTTCTTCTCTTGATAAAGAAAGATAGAGGAGAAAGAAGAAAAGAAAGAAGTTTTTTCTTCCTTTTATTTTGGTTGTTAGCTTTGAGAAAAGAAGGGCATATTTGCTTCCTTTATGTTTTATGCCTAAAGGGGGAGCTTCCCTTCTCTGTTGCAGGGAAAAGTAGCCGTTATCGGTTTTCTTTAGTAGAAAAAGTGACCGTTGGAGTGCGAAATGGCATCCAAGGAATGAGTGAGTAGTGAGTGTGGTGGGGATATTGAATATTGATAGCCCTCTCCAAAGAGGAGAGAGAGCGTGGTGGTGGTATTGTTGTAGTGTGTTATTAATTCTCAAGTTGTTTCTTACTTTCTTTAATGAACTATGGACTCTCAGTCAAACTATGCTCATTTAATTAGGGCCATACCAGCTGGATTTCAGGTCCTTGGTTACAGTGTTCATTGCTTTTAGTTTACTAATTTTATTTTGGTTTTGTATTTGTATCCTCAAATCTCTCATATTATTAACAAGATAGTTGATGATAAATGCGTTGACTGTTCAAATTTGTGATGAAAAGTTACGCTAGATAGAAGCTAGAAATCATTTTGG

mRNA sequence

TCCACACCTGCAACATCATACTTGTGCTCCAACAAAAACCGTCGGCCACACACTCCACAATCCTCTCACTCAACTGTTTTTCTCGATCACTGTGCTCGCCGGAATCTGACATTGTCGGTGGAGCAAGCGGTGCCATCGCCTACCCAGACGCAAATGCAGCTCCTCCTCTTTCGCCGTAGTTTTCGGCTCATTAGAGCTTTGTTCTGTGCCGCGGCTGTGCTTGAGTGGTTCACGGCGGCGGCTCAGCTCCAACACCGTGTACCGAATCTACATTGGCTTCCAGCCACCGCCACGTGGTATGGAAGCCCCGAGGGAGACGGTAGCGACGGTGGAGCATGTGGGTATGGTAATTTAGTGGATGTGAAGCCTCTAAAGGCCAGAGTTGGGGCTGTGAGTCCAGTTCTGTTTAGAAATGGTGAAGGGTGTGGAGCCTGTTACAAAGTGAAGTGTTTAGACCAGAACATTTGCTCTAGACGAGCAGTGACTATAATCGTCACCGACGAGTGCCCCGGTGGGTATTGTTCCAATGGCAATACTCACTTCGATCTCAGCGGTGCCGCTTTTGGCCGTATGGCCATTACCGGCGAAGGTGGGCAGCTCAGAAACCGAGGCGAAATCCCAGTAATTTACCGACGAACTCCGTGTAAGTACCCAGGCAAGAACATTGCCTTCCATGTCAATGAAGGTTCGACAGATTACTGGCTCTCACTTTTAGTTGAATTCGAGGATGGGGATGGAGACATCGGTGCAATGCAAATAAAAGAAACAAATTCAGGGGAATGGCTGGATATGAACCATCTATGGGGGGCAAATTGGTGTATCATTGGTGGGCCATTAAAAGGCCCATTCTCAGTGAGATTAACAACATTATCTACAGGAAGAACCCTCTCAGCAAGGGATATAATCCCAAGGAATTGGTCTCCCAAAGCCACTTACACTTCCCGCCTTAATTTCTTCTCTTGATAAAGAAAGATAGAGGAGAAAGAAGAAAAGAAAGAAGTTTTTTCTTCCTTTTATTTTGGTTGTTAGCTTTGAGAAAAGAAGGGCATATTTGCTTCCTTTATGTTTTATGCCTAAAGGGGGAGCTTCCCTTCTCTGTTGCAGGGAAAAGTAGCCGTTATCGGTTTTCTTTAGTAGAAAAAGTGACCGTTGGAGTGCGAAATGGCATCCAAGGAATGAGTGAGTAGTGAGTGTGGTGGGGATATTGAATATTGATAGCCCTCTCCAAAGAGGAGAGAGAGCGTGGTGGTGGTATTGTTGTAGTGTGTTATTAATTCTCAAGTTGTTTCTTACTTTCTTTAATGAACTATGGACTCTCAGTCAAACTATGCTCATTTAATTAGGGCCATACCAGCTGGATTTCAGGTCCTTGGTTACAGTGTTCATTGCTTTTAGTTTACTAATTTTATTTTGGTTTTGTATTTGTATCCTCAAATCTCTCATATTATTAACAAGATAGTTGATGATAAATGCGTTGACTGTTCAAATTTGTGATGAAAAGTTACGCTAGATAGAAGCTAGAAATCATTTTGG

Coding sequence (CDS)

ATGCAGCTCCTCCTCTTTCGCCGTAGTTTTCGGCTCATTAGAGCTTTGTTCTGTGCCGCGGCTGTGCTTGAGTGGTTCACGGCGGCGGCTCAGCTCCAACACCGTGTACCGAATCTACATTGGCTTCCAGCCACCGCCACGTGGTATGGAAGCCCCGAGGGAGACGGTAGCGACGGTGGAGCATGTGGGTATGGTAATTTAGTGGATGTGAAGCCTCTAAAGGCCAGAGTTGGGGCTGTGAGTCCAGTTCTGTTTAGAAATGGTGAAGGGTGTGGAGCCTGTTACAAAGTGAAGTGTTTAGACCAGAACATTTGCTCTAGACGAGCAGTGACTATAATCGTCACCGACGAGTGCCCCGGTGGGTATTGTTCCAATGGCAATACTCACTTCGATCTCAGCGGTGCCGCTTTTGGCCGTATGGCCATTACCGGCGAAGGTGGGCAGCTCAGAAACCGAGGCGAAATCCCAGTAATTTACCGACGAACTCCGTGTAAGTACCCAGGCAAGAACATTGCCTTCCATGTCAATGAAGGTTCGACAGATTACTGGCTCTCACTTTTAGTTGAATTCGAGGATGGGGATGGAGACATCGGTGCAATGCAAATAAAAGAAACAAATTCAGGGGAATGGCTGGATATGAACCATCTATGGGGGGCAAATTGGTGTATCATTGGTGGGCCATTAAAAGGCCCATTCTCAGTGAGATTAACAACATTATCTACAGGAAGAACCCTCTCAGCAAGGGATATAATCCCAAGGAATTGGTCTCCCAAAGCCACTTACACTTCCCGCCTTAATTTCTTCTCTTGA

Protein sequence

MQLLLFRRSFRLIRALFCAAAVLEWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLNFFS

Homology

[Close]

BLAST of Lsi10G008890 vs. ExPASy Swiss-Prot
Match: Q9M0I2 (Expansin-B3 OS=Arabidopsis thaliana OX=3702 GN=EXPB3 PE=2 SV=2)

HSP 1 Score: 416.8 bits (1070), Expect = 1.9e-115
Identity = 185/241 (76.76%), Postives = 211/241 (87.55%), Query Frame = 0


Query: 27  TAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFR 86
           +A A     V N HWLPA ATWYGSP GDGSDGGACGYG LVDVKPL ARVGAV+P+LF+
Sbjct: 22  SALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFK 81

Query: 87  NGEGCGACYKVKCLDQNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEG 146
           NGEGCGACYKV+CLD++ICSRRAVT+I+TDECPG  CS  +THFDLSGA FGR+AI GE 
Sbjct: 82  NGEGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLAIAGES 141

Query: 147 GQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETN 206
           G LRNRG IPVIYRRT CKY GKNIAFHVNEGSTD+WLSLLVEFEDG+GDIG+M I++  
Sbjct: 142 GPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAG 201

Query: 207 SGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLN 266
           + EWL+M H+WGANWCIIGGPLKGPFS++LTTLS G+TLSA D++PRNW+PKATY+SRLN
Sbjct: 202 AREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLN 260

Query: 267 F 268
           F
Sbjct: 262 F 260

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BLAST of Lsi10G008890 vs. ExPASy Swiss-Prot
Match: Q0DZ85 (Expansin-B16 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB16 PE=3 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 2.2e-111
Identity = 185/256 (72.27%), Postives = 213/256 (83.20%), Query Frame = 0


Query: 12  LIRALFCAAAVLEWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGGACGYGNLVDVK 71
           L  +L  AA V +  +  A   HRV +  W PATATWYGS +GDGSDGGACGYG LVDV 
Sbjct: 18  LFVSLLSAAFVFD--SGEAGAAHRVVDPEWHPATATWYGSADGDGSDGGACGYGTLVDVV 77

Query: 72  PLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPGGYCSNGNTHFD 131
           P+K RVGAVSPVLF+ GEGCGACYKV+CLD +ICSRRAVT+IVTDECPGG C+ G THFD
Sbjct: 78  PMKTRVGAVSPVLFKGGEGCGACYKVRCLDASICSRRAVTVIVTDECPGGVCAFGRTHFD 137

Query: 132 LSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFE 191
           LSGAAF R+A+ G GGQL+NRGEI V+YRRT CKY GKNIAFHVNEGST +WLSLLVEFE
Sbjct: 138 LSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFE 197

Query: 192 DGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDII 251
           DGDGDIG+MQ+K+ NS +W DM H+WGA W +  GPL GPFSVRLTTL+T +TLSA+D+I
Sbjct: 198 DGDGDIGSMQLKQANSAQWQDMKHIWGATWSLTPGPLVGPFSVRLTTLTTRQTLSAQDVI 257

Query: 252 PRNWSPKATYTSRLNF 268
           P+NW+PKATYTSRLNF
Sbjct: 258 PKNWTPKATYTSRLNF 271

[Close]

BLAST of Lsi10G008890 vs. ExPASy Swiss-Prot
Match: Q7X6J9 (Expansin-B17 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB17 PE=3 SV=2)

HSP 1 Score: 395.6 bits (1015), Expect = 4.5e-109
Identity = 175/230 (76.09%), Postives = 199/230 (86.52%), Query Frame = 0


Query: 38  NLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKV 97
           ++ W PATATWYG  EGDGS GGACGYG+LVDV P+KARVG+VSPVLF++GEGCGACYKV
Sbjct: 45  DMEWRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKV 104

Query: 98  KCLDQNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPV 157
           KCLD  ICSRRAVT+IVTDECPGG C+ G THFDLSGAAF RMA+ G GG LR+RG++ V
Sbjct: 105 KCLDHGICSRRAVTVIVTDECPGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSV 164

Query: 158 IYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLW 217
           +YRRT CKY GKNIAF VNEGST++WLSLLVEFEDG GDIG+MQIK+ NS EWLDM H+W
Sbjct: 165 VYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVW 224

Query: 218 GANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLNF 268
           GA WC++ GPL GPFSVRLTTLS  + L+ARD+IPRNW P ATYTSRLNF
Sbjct: 225 GATWCLVRGPLVGPFSVRLTTLSAQKALTARDVIPRNWKPTATYTSRLNF 274

[Close]

BLAST of Lsi10G008890 vs. ExPASy Swiss-Prot
Match: Q9SKU2 (Expansin-B1 OS=Arabidopsis thaliana OX=3702 GN=EXPB1 PE=2 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 9.8e-104
Identity = 169/234 (72.22%), Postives = 195/234 (83.33%), Query Frame = 0


Query: 35  RVPNLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGAC 94
           +V    WLPATATWYGS EGDGS GGACGYG+LVDVKP KARVGAVSP+LF+ GEGCGAC
Sbjct: 34  QVAATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGAC 93

Query: 95  YKVKCLDQNICSRRAVTIIVTDECPGGYCSNG-NTHFDLSGAAFGRMAITGEGGQLRNRG 154
           YKV+CLD+ ICS+RAVTII TD+ P G  +   +THFDLSGAAFG MAI G  G +RNRG
Sbjct: 94  YKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRG 153

Query: 155 EIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDM 214
            + ++YRRT CKY GKNIAFHVN GSTDYWLSLL+E+EDG+GDIG+M I++  S EW+ M
Sbjct: 154 LLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISM 213

Query: 215 NHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLNF 268
            H+WGANWCI+ GPLKGPFSV+LTTLS  +TLSA D+IP NW PKATYTSRLNF
Sbjct: 214 KHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNF 267

[Close]

BLAST of Lsi10G008890 vs. ExPASy Swiss-Prot
Match: Q9SHY6 (Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2)

HSP 1 Score: 249.2 bits (635), Expect = 5.2e-65
Identity = 119/275 (43.27%), Postives = 173/275 (62.91%), Query Frame = 0


Query: 1   MQLLLFRRSFRLIRALFCAAAVLEWFTAAAQLQH------RVPNLHWLPATATWYGSPEG 60
           M +L+  R + L+  LF    +L   T     +          +  W  A +TWYG+P G
Sbjct: 1   MTILVVDRYYMLMNLLFALTCLLLNLTHCFSPKKFNISAATTSDSDWSIAGSTWYGNPTG 60

Query: 61  DGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIV 120
            GSDGGACGYGN V   P    V A  P LF++G+GCGACY+VKC  ++ CS+  VT+++
Sbjct: 61  YGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVI 120

Query: 121 TDECPGGYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFH 180
           TDECPG  C   + HFDLSG AFG MAI+G+  QLRN GE+ ++Y++  C Y GK + F 
Sbjct: 121 TDECPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQ 180

Query: 181 VNEGSTDYWLSLLVEFEDGDGDIGAMQIKET-NSGEWLDMNHLWGANWCI-IGGPLKGPF 240
           V++GS     ++LV + +GDG+IG +++K+  +S +WL M+  WGA W + +  PL+ P 
Sbjct: 181 VDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPL 240

Query: 241 SVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLNF 268
           S+R+T+L +G+T+ A ++IP NW P A Y S +NF
Sbjct: 241 SLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of Lsi10G008890 vs. ExPASy TrEMBL
Match: A0A6J1J9W0 (expansin-B3-like OS=Cucurbita maxima OX=3661 GN=LOC111483878 PE=3 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 5.0e-151
Identity = 254/269 (94.42%), Postives = 259/269 (96.28%), Query Frame = 0


Query: 1   MQLLLFRRSFRLIRALFCAAAVLEWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGG 60
           M LLL  R FRL+RALFCAAAVLEWFTA AQLQH V +LHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLD NICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGK+IAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKE  SGEW+DMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLNFFS 270
           TGR+LSARDIIPRNWSPKATYTSRLNFFS
Sbjct: 241 TGRSLSARDIIPRNWSPKATYTSRLNFFS 269

[Close]

BLAST of Lsi10G008890 vs. ExPASy TrEMBL
Match: A0A0A0KB42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128580 PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 2.1e-149
Identity = 252/269 (93.68%), Postives = 256/269 (95.17%), Query Frame = 0


Query: 1   MQLLLFRRSFRLIRALFCAAAVLEWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGG 60
           MQL L R +FRLI A F AAA+L WF AAA LQH VP+LHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLD NICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAI GEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLNFFS 270
           TGRTLSARDIIPRNWSPKATYTSRL FF+
Sbjct: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 269

[Close]

BLAST of Lsi10G008890 vs. ExPASy TrEMBL
Match: A0A5D3C3I4 (Expansin-B3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001520 PE=3 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 7.9e-149
Identity = 251/269 (93.31%), Postives = 257/269 (95.54%), Query Frame = 0


Query: 1   MQLLLFRRSFRLIRALFCAAAVLEWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGG 60
           M L L   SFRLI ALF AAA+L+W TAAAQLQHR+P+LHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MLLFLHHCSFRLITALFSAAALLQWSTAAAQLQHRLPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSP+LFRNGEGCGACYKVKCLD NICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPILFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAI GEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKE NSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEKNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLNFFS 270
           TGR LSARDIIPRNWSPKATYTSRLNFF+
Sbjct: 241 TGRALSARDIIPRNWSPKATYTSRLNFFT 269

[Close]

BLAST of Lsi10G008890 vs. ExPASy TrEMBL
Match: A0A1S3BJY6 (expansin-B3 OS=Cucumis melo OX=3656 GN=LOC103490518 PE=3 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 7.9e-149
Identity = 251/269 (93.31%), Postives = 257/269 (95.54%), Query Frame = 0


Query: 1   MQLLLFRRSFRLIRALFCAAAVLEWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGG 60
           M L L   SFRLI ALF AAA+L+W TAAAQLQHR+P+LHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MLLFLHHCSFRLITALFSAAALLQWSTAAAQLQHRLPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSP+LFRNGEGCGACYKVKCLD NICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPILFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAI GEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKE NSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEKNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLNFFS 270
           TGR LSARDIIPRNWSPKATYTSRLNFF+
Sbjct: 241 TGRALSARDIIPRNWSPKATYTSRLNFFT 269

[Close]

BLAST of Lsi10G008890 vs. ExPASy TrEMBL
Match: A0A5A7V450 (Expansin-B3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004280 PE=3 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 1.0e-148
Identity = 250/269 (92.94%), Postives = 257/269 (95.54%), Query Frame = 0


Query: 1   MQLLLFRRSFRLIRALFCAAAVLEWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGG 60
           M L L   SFRLI ALF AAA+L+W TAAAQLQHR+P+LHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MLLFLHHCSFRLITALFSAAALLQWSTAAAQLQHRLPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSP+LFRNGEGCGACYKVKCLD NICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPILFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAI GEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKE NSGEWLDMNHLWGANWC+IGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEKNSGEWLDMNHLWGANWCVIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLNFFS 270
           TGR LSARDIIPRNWSPKATYTSRLNFF+
Sbjct: 241 TGRALSARDIIPRNWSPKATYTSRLNFFT 269

[Close]

BLAST of Lsi10G008890 vs. NCBI nr
Match: XP_038901858.1 (expansin-B3-like [Benincasa hispida])

HSP 1 Score: 560.8 bits (1444), Expect = 6.2e-156
Identity = 263/269 (97.77%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 1   MQLLLFRRSFRLIRALFCAAAVLEWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGG 60
           MQLLL R SFRLIRALFCA A+L+WFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MQLLLPRHSFRLIRALFCATALLQWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAI GEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLNFFS 270
           TGRTLSARDIIPRNWSPKATYTSRLNFFS
Sbjct: 241 TGRTLSARDIIPRNWSPKATYTSRLNFFS 269

[Close]

BLAST of Lsi10G008890 vs. NCBI nr
Match: XP_022986016.1 (expansin-B3-like [Cucurbita maxima])

HSP 1 Score: 543.5 bits (1399), Expect = 1.0e-150
Identity = 254/269 (94.42%), Postives = 259/269 (96.28%), Query Frame = 0


Query: 1   MQLLLFRRSFRLIRALFCAAAVLEWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGG 60
           M LLL  R FRL+RALFCAAAVLEWFTA AQLQH V +LHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLD NICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGK+IAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKE  SGEW+DMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLNFFS 270
           TGR+LSARDIIPRNWSPKATYTSRLNFFS
Sbjct: 241 TGRSLSARDIIPRNWSPKATYTSRLNFFS 269

[Close]

BLAST of Lsi10G008890 vs. NCBI nr
Match: XP_023512091.1 (expansin-B3-like [Cucurbita pepo subsp. pepo] >KAG7010368.1 Expansin-B3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 538.9 bits (1387), Expect = 2.5e-149
Identity = 254/270 (94.07%), Postives = 259/270 (95.93%), Query Frame = 0


Query: 1   MQLLLFRRSFRLIRALFCAAAVLEWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGG 60
           M LLL  R FRL+RALFCAAAVLEWFTA AQLQH V +LHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLD NICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGK+IAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNS-GEWLDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKE  S GEW+DMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 240

Query: 241 STGRTLSARDIIPRNWSPKATYTSRLNFFS 270
           STGR+LSARDIIPRNWSPKATYTSRLNFFS
Sbjct: 241 STGRSLSARDIIPRNWSPKATYTSRLNFFS 270

[Close]

BLAST of Lsi10G008890 vs. NCBI nr
Match: KAG6570506.1 (Expansin-B3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 538.9 bits (1387), Expect = 2.5e-149
Identity = 254/270 (94.07%), Postives = 259/270 (95.93%), Query Frame = 0


Query: 1   MQLLLFRRSFRLIRALFCAAAVLEWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGG 60
           M LLL  R FRL+RALFCAAAVLEWFTA AQLQH V +LHWLPATATWYGSPEGDGSDGG
Sbjct: 131 MHLLLHCRGFRLVRALFCAAAVLEWFTATAQLQHHVADLHWLPATATWYGSPEGDGSDGG 190

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLD NICSRRAVTIIVTDECPG
Sbjct: 191 ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDNNICSRRAVTIIVTDECPG 250

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGK+IAFHVNEGST
Sbjct: 251 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKHIAFHVNEGST 310

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNS-GEWLDMNHLWGANWCIIGGPLKGPFSVRLTTL 240
           DYWLSLLVEFEDGDGDIGAMQIKE  S GEW+DMNHLWGANWCIIGGPLKGPFSVRLTTL
Sbjct: 311 DYWLSLLVEFEDGDGDIGAMQIKEAGSAGEWVDMNHLWGANWCIIGGPLKGPFSVRLTTL 370

Query: 241 STGRTLSARDIIPRNWSPKATYTSRLNFFS 270
           STGR+LSARDIIPRNWSPKATYTSRLNFFS
Sbjct: 371 STGRSLSARDIIPRNWSPKATYTSRLNFFS 400

[Close]

BLAST of Lsi10G008890 vs. NCBI nr
Match: XP_004139938.1 (expansin-B3 [Cucumis sativus] >KGN46748.1 hypothetical protein Csa_020701 [Cucumis sativus])

HSP 1 Score: 538.1 bits (1385), Expect = 4.3e-149
Identity = 252/269 (93.68%), Postives = 256/269 (95.17%), Query Frame = 0


Query: 1   MQLLLFRRSFRLIRALFCAAAVLEWFTAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGG 60
           MQL L R +FRLI A F AAA+L WF AAA LQH VP+LHWLPATATWYGSPEGDGSDGG
Sbjct: 1   MQLFLHRSTFRLITAFFSAAALLHWFAAAAHLQHPVPDLHWLPATATWYGSPEGDGSDGG 60

Query: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIVTDECPG 120
           ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLD NICSRRAVTIIVTDECPG
Sbjct: 61  ACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDHNICSRRAVTIIVTDECPG 120

Query: 121 GYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180
           GYCSNGNTHFDLSGAAFGRMAI GEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST
Sbjct: 121 GYCSNGNTHFDLSGAAFGRMAIAGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGST 180

Query: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240
           DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS
Sbjct: 181 DYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLS 240

Query: 241 TGRTLSARDIIPRNWSPKATYTSRLNFFS 270
           TGRTLSARDIIPRNWSPKATYTSRL FF+
Sbjct: 241 TGRTLSARDIIPRNWSPKATYTSRLKFFT 269

[Close]

BLAST of Lsi10G008890 vs. TAIR 10
Match: AT4G28250.1 (expansin B3 )

HSP 1 Score: 416.8 bits (1070), Expect = 1.3e-116
Identity = 185/241 (76.76%), Postives = 211/241 (87.55%), Query Frame = 0


Query: 27  TAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFR 86
           +A A     V N HWLPA ATWYGSP GDGSDGGACGYG LVDVKPL ARVGAV+P+LF+
Sbjct: 22  SALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFK 81

Query: 87  NGEGCGACYKVKCLDQNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEG 146
           NGEGCGACYKV+CLD++ICSRRAVT+I+TDECPG  CS  +THFDLSGA FGR+AI GE 
Sbjct: 82  NGEGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLAIAGES 141

Query: 147 GQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETN 206
           G LRNRG IPVIYRRT CKY GKNIAFHVNEGSTD+WLSLLVEFEDG+GDIG+M I++  
Sbjct: 142 GPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAG 201

Query: 207 SGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLN 266
           + EWL+M H+WGANWCIIGGPLKGPFS++LTTLS G+TLSA D++PRNW+PKATY+SRLN
Sbjct: 202 AREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLN 260

Query: 267 F 268
           F
Sbjct: 262 F 260

[Close]

BLAST of Lsi10G008890 vs. TAIR 10
Match: AT4G28250.2 (expansin B3 )

HSP 1 Score: 401.0 bits (1029), Expect = 7.7e-112
Identity = 181/241 (75.10%), Postives = 207/241 (85.89%), Query Frame = 0


Query: 27  TAAAQLQHRVPNLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFR 86
           +A A     V N HWLPA ATWYGSP GDGSDGGACGYG LVDVKPL ARVGAV+P+LF+
Sbjct: 22  SALATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFK 81

Query: 87  NGEGCGACYKVKCLDQNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEG 146
           NGEGCGACYKV+CLD++ICSRRAVT+I+TDECPG  CS  +THFDLSGA FGR+AI GE 
Sbjct: 82  NGEGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLAIAGES 141

Query: 147 GQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETN 206
           G LRNRG IPVIYRR      GKNIAFHVNEGSTD+WLSLLVEFEDG+GDIG+M I++  
Sbjct: 142 GPLRNRGLIPVIYRR------GKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAG 201

Query: 207 SGEWLDMNHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLN 266
           + EWL+M H+WGANWCIIGGPLKGPFS++LTTLS G+TLSA D++PRNW+PKATY+SRLN
Sbjct: 202 AREWLEMKHVWGANWCIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLN 254

Query: 267 F 268
           F
Sbjct: 262 F 254

[Close]

BLAST of Lsi10G008890 vs. TAIR 10
Match: AT2G20750.1 (expansin B1 )

HSP 1 Score: 377.9 bits (969), Expect = 6.9e-105
Identity = 169/234 (72.22%), Postives = 195/234 (83.33%), Query Frame = 0


Query: 35  RVPNLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGAC 94
           +V    WLPATATWYGS EGDGS GGACGYG+LVDVKP KARVGAVSP+LF+ GEGCGAC
Sbjct: 34  QVAATRWLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGAC 93

Query: 95  YKVKCLDQNICSRRAVTIIVTDECPGGYCSNG-NTHFDLSGAAFGRMAITGEGGQLRNRG 154
           YKV+CLD+ ICS+RAVTII TD+ P G  +   +THFDLSGAAFG MAI G  G +RNRG
Sbjct: 94  YKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRG 153

Query: 155 EIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDM 214
            + ++YRRT CKY GKNIAFHVN GSTDYWLSLL+E+EDG+GDIG+M I++  S EW+ M
Sbjct: 154 LLNILYRRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISM 213

Query: 215 NHLWGANWCIIGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLNF 268
            H+WGANWCI+ GPLKGPFSV+LTTLS  +TLSA D+IP NW PKATYTSRLNF
Sbjct: 214 KHIWGANWCIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNF 267

[Close]

BLAST of Lsi10G008890 vs. TAIR 10
Match: AT1G65680.1 (expansin B2 )

HSP 1 Score: 249.2 bits (635), Expect = 3.7e-66
Identity = 119/275 (43.27%), Postives = 173/275 (62.91%), Query Frame = 0


Query: 1   MQLLLFRRSFRLIRALFCAAAVLEWFTAAAQLQH------RVPNLHWLPATATWYGSPEG 60
           M +L+  R + L+  LF    +L   T     +          +  W  A +TWYG+P G
Sbjct: 1   MTILVVDRYYMLMNLLFALTCLLLNLTHCFSPKKFNISAATTSDSDWSIAGSTWYGNPTG 60

Query: 61  DGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQNICSRRAVTIIV 120
            GSDGGACGYGN V   P    V A  P LF++G+GCGACY+VKC  ++ CS+  VT+++
Sbjct: 61  YGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVI 120

Query: 121 TDECPGGYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTPCKYPGKNIAFH 180
           TDECPG  C   + HFDLSG AFG MAI+G+  QLRN GE+ ++Y++  C Y GK + F 
Sbjct: 121 TDECPG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQ 180

Query: 181 VNEGSTDYWLSLLVEFEDGDGDIGAMQIKET-NSGEWLDMNHLWGANWCI-IGGPLKGPF 240
           V++GS     ++LV + +GDG+IG +++K+  +S +WL M+  WGA W + +  PL+ P 
Sbjct: 181 VDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPL 240

Query: 241 SVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLNF 268
           S+R+T+L +G+T+ A ++IP NW P A Y S +NF
Sbjct: 241 SLRVTSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of Lsi10G008890 vs. TAIR 10
Match: AT2G45110.1 (expansin B4 )

HSP 1 Score: 218.0 bits (554), Expect = 9.2e-57
Identity = 101/225 (44.89%), Postives = 141/225 (62.67%), Query Frame = 0


Query: 44  ATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRNGEGCGACYKVKCLDQN 103
           A  TWYG P G GS GGACGYG+ V   PL A V A  P LF NG+GCG CY+V C+   
Sbjct: 36  AGVTWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHP 95

Query: 104 ICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAITGEGGQLRNRGEIPVIYRRTP 163
            CS   +T+ +TDECPGG C++   H DLSG A G +A  G+  QLR+ G I V Y+R  
Sbjct: 96  ACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAA 155

Query: 164 CKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNSGEWLDMNHLWGANWCI 223
           C Y G NI F ++ G+  Y++S +VE+E+GDGD+  ++I+    G ++ M  +  A W +
Sbjct: 156 CLYRGTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQPA-GGSFISMQEMRSAVWKV 215

Query: 224 -IGGPLKGPFSVRLTTLSTGRTLSARDIIPRNWSPKATYTSRLNF 268
             G  L+GPF++RLT+  + + + A ++IP NW P  +Y S +NF
Sbjct: 216 NSGSALRGPFNIRLTSGESHKVIVAYNVIPANWKPDESYRSIVNF 259

The following BLAST results are available for this feature:

BLAST of Lsi10G008890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0I2	1.9e-115	76.76	Expansin-B3 OS=Arabidopsis thaliana OX=3702 GN=EXPB3 PE=2 SV=2	[more]
Q0DZ85	2.2e-111	72.27	Expansin-B16 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB16 PE=3 SV=1	[more]
Q7X6J9	4.5e-109	76.09	Expansin-B17 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB17 PE=3 SV=2	[more]
Q9SKU2	9.8e-104	72.22	Expansin-B1 OS=Arabidopsis thaliana OX=3702 GN=EXPB1 PE=2 SV=1	[more]
Q9SHY6	5.2e-65	43.27	Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2	[more]

BLAST of Lsi10G008890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J9W0	5.0e-151	94.42	expansin-B3-like OS=Cucurbita maxima OX=3661 GN=LOC111483878 PE=3 SV=1	[more]
A0A0A0KB42	2.1e-149	93.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128580 PE=3 SV=1	[more]
A0A5D3C3I4	7.9e-149	93.31	Expansin-B3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001520 P...	[more]
A0A1S3BJY6	7.9e-149	93.31	expansin-B3 OS=Cucumis melo OX=3656 GN=LOC103490518 PE=3 SV=1	[more]
A0A5A7V450	1.0e-148	92.94	Expansin-B3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004280 PE...	[more]

BLAST of Lsi10G008890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901858.1	6.2e-156	97.77	expansin-B3-like [Benincasa hispida]	[more]
XP_022986016.1	1.0e-150	94.42	expansin-B3-like [Cucurbita maxima]	[more]
XP_023512091.1	2.5e-149	94.07	expansin-B3-like [Cucurbita pepo subsp. pepo] >KAG7010368.1 Expansin-B3, partial...	[more]
KAG6570506.1	2.5e-149	94.07	Expansin-B3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004139938.1	4.3e-149	93.68	expansin-B3 [Cucumis sativus] >KGN46748.1 hypothetical protein Csa_020701 [Cucum...	[more]

BLAST of Lsi10G008890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28250.1	1.3e-116	76.76	expansin B3	[more]
AT4G28250.2	7.7e-112	75.10	expansin B3	[more]
AT2G20750.1	6.9e-105	72.22	expansin B1	[more]
AT1G65680.1	3.7e-66	43.27	expansin B2	[more]
AT2G45110.1	9.2e-57	44.89	expansin B4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 40..55 score: 42.34 coord: 152..168 score: 47.94 coord: 210..224 score: 40.0 coord: 81..99 score: 51.84 coord: 249..263 score: 30.83 coord: 58..76 score: 43.82
IPR005795	Major pollen allergen Lol pI	PRINTS	PR00829	LOLP1ALLERGN	coord: 119..134 score: 38.07 coord: 79..90 score: 26.52 coord: 141..156 score: 39.2 coord: 189..204 score: 47.73 coord: 173..188 score: 50.57 coord: 239..256 score: 34.85
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 77..159 e-value: 2.4E-10 score: 50.4
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 59..169 score: 31.319813
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 79..158 e-value: 7.9E-17 score: 61.3
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 27..165 e-value: 8.4E-44 score: 151.0
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 40..168
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 166..268 e-value: 8.3E-32 score: 111.0
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 169..263
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 171..252 e-value: 5.8E-26 score: 90.3
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 182..263 score: 22.677885
None	No IPR available	PANTHER	PTHR31692	EXPANSIN-B3	coord: 18..268
None	No IPR available	PANTHER	PTHR31692:SF96	EXPANSIN-LIKE PROTEIN B1	coord: 18..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G008890.1	Lsi10G008890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019953	sexual reproduction
biological_process	GO:0006949	syncytium formation
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane