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Lsi10G008750 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCCTCGCAATAACTGGAGCAGTTGAAGCTCGCAATTTTCGTGAAAGGTCGAGCATTGATGATGATAAGAAACAGCCTCAGTGGCTAGTTGGATATGATGGGGTCAGTGTGCTCATTCCCGGCATTGGACGCATCACATTGTCGCCATATGAAAAAGGCAGACATGGAGGAGGACATGCGAGTTCATATGGCAGTAACCCAGCTCCAAGACGTCAATATATTCCAGGTGGGGATGACAATTTCATTCCAAATCCTGGATTTGAGGTGCCAATCCCTGCCAATATTGGTGGTGTTAAAGAAACATCCTATCCTTGA ATGATCCTCGCAATAACTGGAGCAGTTGAAGCTCGCAATTTTCGTGAAAGGTCGAGCATTGATGATGATAAGAAACAGCCTCAGTGGCTAGTTGGATATGATGGGGTCAGTGTGCTCATTCCCGGCATTGGACGCATCACATTGTCGCCATATGAAAAAGGCAGACATGGAGGAGGACATGCGAGTTCATATGGCAGTAACCCAGCTCCAAGACGTCAATATATTCCAGGTGGGGATGACAATTTCATTCCAAATCCTGGATTTGAGGTGCCAATCCCTGCCAATATTGGTGGTGTTAAAGAAACATCCTATCCTTGA ATGATCCTCGCAATAACTGGAGCAGTTGAAGCTCGCAATTTTCGTGAAAGGTCGAGCATTGATGATGATAAGAAACAGCCTCAGTGGCTAGTTGGATATGATGGGGTCAGTGTGCTCATTCCCGGCATTGGACGCATCACATTGTCGCCATATGAAAAAGGCAGACATGGAGGAGGACATGCGAGTTCATATGGCAGTAACCCAGCTCCAAGACGTCAATATATTCCAGGTGGGGATGACAATTTCATTCCAAATCCTGGATTTGAGGTGCCAATCCCTGCCAATATTGGTGGTGTTAAAGAAACATCCTATCCTTGA MILAITGAVEARNFRERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYEKGRHGGGHASSYGSNPAPRRQYIPGGDDNFIPNPGFEVPIPANIGGVKETSYP Homology
BLAST of Lsi10G008750 vs. ExPASy Swiss-Prot
Match: P47925 (Putative cell wall protein OS=Arabidopsis thaliana OX=3702 GN=At2g20870 PE=2 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 7.4e-07 Identity = 36/106 (33.96%), Postives = 46/106 (43.40%), Query Frame = 0
BLAST of Lsi10G008750 vs. ExPASy TrEMBL
Match: A0A6J1I1F6 (putative cell wall protein OS=Cucurbita maxima OX=3661 GN=LOC111469644 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 3.4e-39 Identity = 84/106 (79.25%), Postives = 90/106 (84.91%), Query Frame = 0
BLAST of Lsi10G008750 vs. ExPASy TrEMBL
Match: A0A6J1CFL0 (putative cell wall protein OS=Momordica charantia OX=3673 GN=LOC111011227 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.3e-35 Identity = 82/106 (77.36%), Postives = 87/106 (82.08%), Query Frame = 0
BLAST of Lsi10G008750 vs. ExPASy TrEMBL
Match: A0A5D3BC54 (Putative cell wall protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold464G00120 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 6.9e-32 Identity = 75/106 (70.75%), Postives = 82/106 (77.36%), Query Frame = 0
BLAST of Lsi10G008750 vs. ExPASy TrEMBL
Match: A0A0A0KCX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124140 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 4.2e-21 Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of Lsi10G008750 vs. ExPASy TrEMBL
Match: M5XEW2 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G234900 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 6.9e-16 Identity = 50/109 (45.87%), Postives = 64/109 (58.72%), Query Frame = 0
BLAST of Lsi10G008750 vs. NCBI nr
Match: XP_022970746.1 (putative cell wall protein [Cucurbita maxima]) HSP 1 Score: 170.6 bits (431), Expect = 7.1e-39 Identity = 84/106 (79.25%), Postives = 90/106 (84.91%), Query Frame = 0
BLAST of Lsi10G008750 vs. NCBI nr
Match: XP_022140620.1 (putative cell wall protein [Momordica charantia]) HSP 1 Score: 158.7 bits (400), Expect = 2.8e-35 Identity = 82/106 (77.36%), Postives = 87/106 (82.08%), Query Frame = 0
BLAST of Lsi10G008750 vs. NCBI nr
Match: KAA0065341.1 (putative cell wall protein [Cucumis melo var. makuwa] >TYJ96609.1 putative cell wall protein [Cucumis melo var. makuwa]) HSP 1 Score: 146.4 bits (368), Expect = 1.4e-31 Identity = 75/106 (70.75%), Postives = 82/106 (77.36%), Query Frame = 0
BLAST of Lsi10G008750 vs. NCBI nr
Match: XP_034206933.1 (putative cell wall protein [Prunus dulcis] >VVA27151.1 PREDICTED: putative cell [Prunus dulcis]) HSP 1 Score: 94.4 bits (233), Expect = 6.4e-16 Identity = 51/109 (46.79%), Postives = 64/109 (58.72%), Query Frame = 0
BLAST of Lsi10G008750 vs. NCBI nr
Match: XP_007216421.1 (putative cell wall protein [Prunus persica] >ONI18729.1 hypothetical protein PRUPE_3G234900 [Prunus persica] >OWR80120.1 hypothetical protein SJDPG4_10125 [Porphyromonas gingivalis SJD4]) HSP 1 Score: 93.2 bits (230), Expect = 1.4e-15 Identity = 50/109 (45.87%), Postives = 64/109 (58.72%), Query Frame = 0
BLAST of Lsi10G008750 vs. TAIR 10
Match: AT2G20870.1 (cell wall protein precursor, putative ) HSP 1 Score: 54.7 bits (130), Expect = 5.3e-08 Identity = 36/106 (33.96%), Postives = 46/106 (43.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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